Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACCN2 0 hgsc.bcm.edu;ucsc.edu 37 12 50472709 50472709 + Missense_Mutation SNP G G T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ACPL2 92370 hgsc.bcm.edu;ucsc.edu 37 3 141011927 141011927 + Silent SNP T T C novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ADCY8 114 hgsc.bcm.edu;ucsc.edu 37 8 131796014 131796014 + Missense_Mutation SNP G G T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ATF5 22809 hgsc.bcm.edu 37 19 50435817 50435817 + Missense_Mutation SNP A A T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 BBS7 55212 hgsc.bcm.edu;ucsc.edu 37 4 122776665 122776665 + Missense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 BOC 91653 hgsc.bcm.edu 37 3 113002344 113002344 + Missense_Mutation SNP C C T rs147067616 TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 BTN1A1 696 hgsc.bcm.edu;ucsc.edu 37 6 26505216 26505216 + Missense_Mutation SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 CNTROB 116840 hgsc.bcm.edu;ucsc.edu 37 17 7839782 7839782 + Missense_Mutation SNP G G T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 CRISPLD1 83690 hgsc.bcm.edu 37 8 75924705 75924705 + Nonsense_Mutation SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 CTCF 10664 hgsc.bcm.edu;ucsc.edu 37 16 67644949 67644949 + Nonsense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 DCN 1634 hgsc.bcm.edu;ucsc.edu 37 12 91572254 91572254 + Missense_Mutation SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ELL3 80237 hgsc.bcm.edu;ucsc.edu 37 15 44067734 44067734 + Silent SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 EP400 57634 hgsc.bcm.edu 37 12 132471271 132471271 + Silent SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 EXO1 9156 hgsc.bcm.edu;ucsc.edu 37 1 242030291 242030291 + Nonsense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 FAM200A 221786 hgsc.bcm.edu;ucsc.edu 37 7 99144481 99144481 + Missense_Mutation SNP A A G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 FAM55A 0 hgsc.bcm.edu;ucsc.edu 37 11 114401131 114401131 + Missense_Mutation SNP T T A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 FCRL1 115350 hgsc.bcm.edu;ucsc.edu 37 1 157765910 157765910 + Silent SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 FGR 2268 hgsc.bcm.edu;ucsc.edu 37 1 27941092 27941092 + Silent SNP T T C novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 GBA2 57704 hgsc.bcm.edu;ucsc.edu 37 9 35748456 35748456 + Silent SNP A A T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 GGNBP2 79893 hgsc.bcm.edu;ucsc.edu 37 17 34945653 34945653 + Missense_Mutation SNP A A G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 GLS 2744 hgsc.bcm.edu;ucsc.edu 37 2 191796274 191796274 + Missense_Mutation SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 HELLS 3070 hgsc.bcm.edu;ucsc.edu 37 10 96354517 96354517 + Silent SNP T T G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 HSPB2 3316 hgsc.bcm.edu 37 11 111784450 111784450 + Missense_Mutation SNP T T A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ITGA1 3672 hgsc.bcm.edu;ucsc.edu 37 5 52206160 52206160 + Missense_Mutation SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 KIAA0748 0 hgsc.bcm.edu;ucsc.edu 37 12 55356980 55356980 + Silent SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 KIAA1430 57587 hgsc.bcm.edu;ucsc.edu 37 4 186096970 186096970 + Missense_Mutation SNP C C G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 KRT80 144501 hgsc.bcm.edu 37 12 52565297 52565297 + Missense_Mutation SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 MIR548N 100302152 hgsc.bcm.edu;ucsc.edu 37 2 179320446 179320446 + RNA SNP T T G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 N6AMT2 221143 hgsc.bcm.edu;ucsc.edu 37 13 21306082 21306082 + Missense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 NANS 54187 hgsc.bcm.edu 37 9 100845161 100845161 + Missense_Mutation SNP C C T rs143794024 TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 NCAPD3 23310 hgsc.bcm.edu;ucsc.edu 37 11 134046230 134046230 + Missense_Mutation SNP G G C novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 NIPA1 123606 hgsc.bcm.edu;ucsc.edu 37 15 23049093 23049095 + In_Frame_Del DEL GAT GAT - novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 GAT GAT . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 NLRP14 338323 hgsc.bcm.edu 37 11 7064163 7064163 + Silent SNP C C G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 OR4D10 390197 hgsc.bcm.edu 37 11 59244948 59244948 + Silent SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 PCNT 5116 hgsc.bcm.edu;ucsc.edu 37 21 47832897 47832897 + Silent SNP C C T rs144445891 TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 PDE8A 5151 hgsc.bcm.edu;ucsc.edu 37 15 85643406 85643406 + Missense_Mutation SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 PITPNM3 83394 hgsc.bcm.edu 37 17 6381331 6381331 + Silent SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 PLEKHH2 130271 hgsc.bcm.edu;ucsc.edu 37 2 43973017 43973017 + Missense_Mutation SNP A A G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 RGL1 23179 hgsc.bcm.edu;ucsc.edu 37 1 183895346 183895346 + Missense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 SEMA4B 10509 hgsc.bcm.edu;ucsc.edu 37 15 90768609 90768609 + Silent SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 SLC16A3 9123 hgsc.bcm.edu 37 17 80195666 80195666 + Missense_Mutation SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 SNX24 28966 hgsc.bcm.edu;ucsc.edu 37 5 122335673 122335673 + Missense_Mutation SNP C C T novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 STRA6 64220 hgsc.bcm.edu;ucsc.edu 37 15 74483211 74483211 + Silent SNP T T C novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 TMEM200A 114801 hgsc.bcm.edu;ucsc.edu 37 6 130762739 130762739 + Missense_Mutation SNP T T C novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 TNS1 7145 hgsc.bcm.edu 37 2 218686541 218686541 + Missense_Mutation SNP A A G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 TRANK1 9881 hgsc.bcm.edu;ucsc.edu 37 3 36871105 36871108 + Frame_Shift_Del DEL CTGA CTGA - novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 CTGA CTGA . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 TRPM1 4308 hgsc.bcm.edu 37 15 31295002 31295002 + Nonsense_Mutation SNP C C A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 TTN 7273 hgsc.bcm.edu;ucsc.edu 37 2 179399891 179399891 + Missense_Mutation SNP C C G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ZNF131 7690 hgsc.bcm.edu;ucsc.edu 37 5 43175076 43175076 + Missense_Mutation SNP C C G novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1 ZNF227 7770 hgsc.bcm.edu 37 19 44739196 44739196 + Missense_Mutation SNP G G A novel TCGA-BP-4775-01A-01D-1366-10 TCGA-BP-4775-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID a3b3efb4-d6c5-4249-b125-1bb2232d2ea9 7548d4f2-9c42-43d0-b807-44695c970ea1