Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACAP2 23527 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 195066024 195066024 + Missense_Mutation SNP C C A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 ANKRD22 118932 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 90591656 90591656 + Missense_Mutation SNP C C A rs143516492 alternate_allele TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 APLP1 333 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 36362618 36362618 + Silent SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 BLM 641 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 91304206 91304206 + Missense_Mutation SNP A A C novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 C11orf9 0 broad.mit.edu;ucsc.edu 37 11 61543864 61543864 + Missense_Mutation SNP A G G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 C9orf150 0 hgsc.bcm.edu 37 9 12775861 12775862 + In_Frame_Ins INS - - GGCGGCGGC novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 CD96 10225 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 111343188 111343188 + Missense_Mutation SNP T T A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 CLDN4 1364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 73245666 73245666 + Silent SNP C C T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 DAGLA 747 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 61511889 61511889 + Silent SNP C C T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 DIO1 1733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 54370442 54370442 + Silent SNP A A G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 DNAH10 196385 broad.mit.edu;ucsc.edu 37 12 124383326 124383326 + Missense_Mutation SNP C A A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 GRN 2896 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 42426617 42426617 + Missense_Mutation SNP G G T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 GTF2F2 2963 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 45841372 45841372 + Missense_Mutation SNP A A C novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 ITSN2 50618 hgsc.bcm.edu;ucsc.edu 37 2 24435521 24435521 + Frame_Shift_Del DEL T T - novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 KIAA2022 340533 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 73962035 73962035 + Missense_Mutation SNP G G T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 LATS1 9113 broad.mit.edu;ucsc.edu 37 6 150023180 150023180 + Missense_Mutation SNP C T T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 LPIN1 23175 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 11911638 11911638 + Missense_Mutation SNP C C A rs145629147 byfrequency;alternate_allele TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 MRM1 79922 hgsc.bcm.edu;ucsc.edu 37 17 34958701 34958701 + Frame_Shift_Del DEL G G - novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 MYO3A 53904 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 26313006 26313006 + Missense_Mutation SNP T T G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 MYST3 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 41804117 41804117 + Missense_Mutation SNP A A G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 NCAPD2 9918 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 6619242 6619242 + Missense_Mutation SNP C C A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 NCAPH2 29781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 50960439 50960439 + Missense_Mutation SNP G G A rs117383090 by1000genomes TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 NF1 4763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 29687577 29687577 + Nonsense_Mutation SNP G G T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 NUP210L 91181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 154112289 154112289 + Missense_Mutation SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52643654 52643654 + Frame_Shift_Del DEL C C - novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C C - C C Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 PRUNE2 158471 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 79461509 79461509 + Missense_Mutation SNP A A G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 RAB24 53917 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176728945 176728945 + Silent SNP A A G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 RABGGTB 5876 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 76255648 76255648 + Silent SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 RPS6KA1 6195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26897964 26897964 + Missense_Mutation SNP A A T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 RTL1 388015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 101351021 101351021 + Silent SNP C C T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SERINC1 57515 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 122768141 122768141 + Missense_Mutation SNP G G C novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SF3B3 23450 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 70594436 70594436 + Missense_Mutation SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SLC5A7 60482 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 108627273 108627273 + Missense_Mutation SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SLCO1B3 28234 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 21008017 21008017 + Frame_Shift_Del DEL T T - novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SMEK1 55671 broad.mit.edu;hgsc.bcm.edu 37 14 91975891 91975891 + Missense_Mutation SNP C C T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 SMURF2 64750 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 62576936 62576936 + Missense_Mutation SNP T T C novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 STXBP2 6813 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 7703632 7703632 + Missense_Mutation SNP C C T novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 TFAP2A 7020 hgsc.bcm.edu 37 6 10410466 10410467 + Frame_Shift_Ins INS - - G novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179605552 179605552 + Silent SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 UBC 7316 hgsc.bcm.edu 37 12 125398050 125398052 + In_Frame_Del DEL TGA TGA - novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 TGA TGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 UBQLN3 50613 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 5528857 5528857 + Silent SNP G G A novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 VHL 7428 hgsc.bcm.edu 37 3 10183767 10183767 + Missense_Mutation SNP G G C novel TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5 MST1P2 11209 broad.mit.edu 37 1 16974758 16974758 + RNA SNP G A A rs78488193 byfrequency TCGA-B0-5710-01A-11D-1669-08 TCGA-B0-5710-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 12f1e370-c269-4b95-a89b-a1f3ae42e876 64dd13a7-1b36-43c0-af6d-dcc1c8205ec5