Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AADACL3 126767 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 12785730 12785730 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ABCA12 26154 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 215868936 215868936 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ABCA2 20 broad.mit.edu;hgsc.bcm.edu 37 9 139916407 139916407 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ADAMTS7 11173 broad.mit.edu;hgsc.bcm.edu 37 15 79058756 79058756 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ADCYAP1R1 117 hgsc.bcm.edu;ucsc.edu 37 7 31142950 31142959 + Frame_Shift_Del DEL CGTGTTTGAG CGTGTTTGAG - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 CGTGTTTGAG CGTGTTTGAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a AICDA 57379 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 8758017 8758017 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ANGPTL7 10218 hgsc.bcm.edu;ucsc.edu 37 1 11249984 11249984 + Frame_Shift_Del DEL A A - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ANKRD44 91526 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 197953472 197953473 + Frame_Shift_Ins INS - - T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ARNTL 406 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 13375946 13375946 + Missense_Mutation SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ATP1A1 476 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 116932982 116932982 + Missense_Mutation SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ATPAF2 91647 hgsc.bcm.edu;ucsc.edu 37 17 17927959 17927961 + In_Frame_Del DEL ATT ATT - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 ATT ATT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a B9D1 27077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 19250621 19250621 + Missense_Mutation SNP A A C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a C16orf71 146562 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 4787820 4787820 + Missense_Mutation SNP A A C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a C1orf63 57035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 25573155 25573160 + In_Frame_Del DEL GAACCC GAACCC - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 GAACCC GAACCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CASP10 843 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 202060612 202060612 + Missense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CCDC41 51134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 94772668 94772668 + Missense_Mutation SNP A A T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CDK2 1017 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56363264 56363265 + Frame_Shift_Del DEL GA GA - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 GA GA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CDK2 1017 hgsc.bcm.edu 37 12 56363267 56363267 + Silent SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CHD5 26038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 6170533 6170533 + Missense_Mutation SNP A A T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CPLX2 10814 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 175306865 175306865 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CTSE 1510 broad.mit.edu;hgsc.bcm.edu 37 1 206325277 206325277 + Missense_Mutation SNP A A T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CYFIP2 26999 broad.mit.edu;hgsc.bcm.edu 37 5 156746796 156746796 + Silent SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a DCDC5 100506627 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 30953424 30953424 + Nonsense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a DMD 1756 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 31241191 31241191 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a DMXL2 23312 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 51791649 51791649 + Missense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a DNAH3 55567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 21123085 21123085 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a DNAJB4 11080 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 78478852 78478852 + Missense_Mutation SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a E2F8 79733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 19247052 19247052 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a EHD3 30845 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 31484438 31484438 + Silent SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ENHO 375704 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 34521629 34521629 + Missense_Mutation SNP A A C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ENO1 2023 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 8926510 8926510 + Missense_Mutation SNP C C A rs11544509 alternate_allele TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a EPYC 1833 broad.mit.edu;hgsc.bcm.edu 37 12 91366748 91366748 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FBF1 85302 broad.mit.edu;hgsc.bcm.edu 37 17 73913852 73913852 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FOLH1B 219595 hgsc.bcm.edu 37 11 89424222 89424223 + Frame_Shift_Ins INS - - T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FOXK1 221937 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 4796681 4796681 + Silent SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FRS2 10818 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 69965989 69965989 + Frame_Shift_Del DEL T T - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FTSJ2 29960 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 2274853 2274853 + Silent SNP T T A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a GALNT3 2591 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 166611170 166611170 + Silent SNP A A T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a GLCCI1 113263 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 8126006 8126006 + Silent SNP T T G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a GOLIM4 27333 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 167750471 167750471 + Missense_Mutation SNP T T G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T T G T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a GULP1 51454 broad.mit.edu;hgsc.bcm.edu 37 2 189458666 189458666 + Splice_Site SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a HEPH 9843 hgsc.bcm.edu 37 X 65393494 65393495 + Frame_Shift_Ins INS - - C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a HFM1 164045 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 91818686 91818686 + Missense_Mutation SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a HSP90AB1 3326 broad.mit.edu;hgsc.bcm.edu 37 6 44218220 44218220 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a HSPA12A 259217 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 118434631 118434631 + Missense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a HTT 3064 hgsc.bcm.edu;ucsc.edu 37 4 3117148 3117160 + Frame_Shift_Del DEL AGTTGGCTACTAA AGTTGGCTACTAA - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 AGTTGGCTACTAA AGTTGGCTACTAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a IPP 3652 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 46180107 46180115 + In_Frame_Del DEL ATTGCTGAT ATTGCTGAT - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 ATTGCTGAT ATTGCTGAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a KIF16B 55614 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 16359478 16359478 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a KLHL26 55295 hgsc.bcm.edu 37 19 18778933 18778937 + Frame_Shift_Del DEL GCGCG GCGCG - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 GCGCG GCGCG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a LDHAL6B 92483 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 59499176 59499176 + Nonsense_Mutation SNP A A T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a LILRB4 11006 hgsc.bcm.edu 37 19 55179244 55179244 + Frame_Shift_Del DEL G G - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a LRRC32 2615 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 76371567 76371567 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MAP2K7 5609 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 7977212 7977212 + Missense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MAP4 4134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 48019414 48019414 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MAVS 57506 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 3845153 3845153 + Silent SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MFSD6 54842 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 191301590 191301590 + Missense_Mutation SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MSC 9242 broad.mit.edu;hgsc.bcm.edu 37 8 72756043 72756043 + Missense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MYST4 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 76748798 76748798 + Missense_Mutation SNP T T A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a NCOA1 8648 hgsc.bcm.edu;ucsc.edu 37 2 24929598 24929598 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a NF1 4763 broad.mit.edu;hgsc.bcm.edu 37 17 29556075 29556075 + Silent SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a NF1 4763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 29687570 29687570 + Nonsense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a OR10S1 219873 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 123848361 123848361 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a OR2L8 391190 broad.mit.edu;hgsc.bcm.edu 37 1 248112339 248112339 + Missense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a OR2T27 403239 broad.mit.edu;hgsc.bcm.edu 37 1 248813490 248813490 + Silent SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a OTOF 9381 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 26703722 26703722 + Missense_Mutation SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52662912 52662912 + Nonsense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PDE4DIP 9659 broad.mit.edu;hgsc.bcm.edu 37 1 144857634 144857634 + Silent SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PDLIM4 8572 broad.mit.edu;hgsc.bcm.edu 37 5 131598428 131598428 + Missense_Mutation SNP G G T rs138635559 alternate_allele TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PHF12 57649 broad.mit.edu;hgsc.bcm.edu 37 17 27250942 27250942 + Missense_Mutation SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PHTF1 10745 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 114252891 114252891 + Missense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PLTP 5360 broad.mit.edu;hgsc.bcm.edu 37 20 44531163 44531163 + Silent SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a POLK 51426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 74889874 74889874 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a RNH1 6050 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 499015 499015 + Missense_Mutation SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SALL3 27164 hgsc.bcm.edu 37 18 76752151 76752151 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SCN10A 6336 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 38797338 38797338 + Nonsense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SCNN1A 6337 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 6457292 6457292 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SFRP4 6424 hgsc.bcm.edu 37 7 37947147 37947148 + Frame_Shift_Ins INS - - G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SLC26A4 5172 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 107329537 107329537 + Silent SNP G G A rs140778437 TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SMC3 9126 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 112335137 112335137 + Silent SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SNED1 25992 broad.mit.edu;hgsc.bcm.edu 37 2 241974046 241974046 + Missense_Mutation SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SNORD52 26797 broad.mit.edu;hgsc.bcm.edu 37 6 31804867 31804867 + RNA SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SNRPB 6628 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 2448399 2448399 + Silent SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SOHLH1 402381 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 138586216 138586216 + Silent SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SOHLH1 402381 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 138586217 138586217 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SORD 6652 hgsc.bcm.edu 37 15 45361216 45361216 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a SPEF2 79925 hgsc.bcm.edu;ucsc.edu 37 5 35700726 35700726 + Frame_Shift_Del DEL A A - novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a STARD7 56910 broad.mit.edu;hgsc.bcm.edu 37 2 96861119 96861119 + Nonsense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a STRBP 55342 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 125936121 125936121 + Missense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TARS2 80222 broad.mit.edu;hgsc.bcm.edu 37 1 150476838 150476838 + Missense_Mutation SNP G G A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TCOF1 6949 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 149749096 149749096 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a THSD1 55901 hgsc.bcm.edu 37 13 52952072 52952073 + Frame_Shift_Ins INS - - C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TNK1 8711 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7291835 7291835 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TRPC7 57113 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 135692925 135692925 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179600277 179600277 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a TUBB1 81027 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 57599336 57599336 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a UBA7 7318 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 49847308 49847308 + Missense_Mutation SNP G G T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a USH2A 7399 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 216380760 216380760 + Missense_Mutation SNP T T G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a UTRN 7402 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 144780343 144780343 + Missense_Mutation SNP A A G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10188200 10188200 + Missense_Mutation SNP C C A rs5030811 bycluster;alternate_allele TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a VPS11 55823 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118948939 118948939 + Missense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a WDFY3 23001 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 85731357 85731357 + Silent SNP C C G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a WDTC1 23038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 27621085 27621085 + Missense_Mutation SNP G G C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a WIPI2 26100 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 5270558 5270558 + Missense_Mutation SNP A A G rs144773383 byfrequency;alternate_allele TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ZNF292 23036 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 87970890 87970890 + Nonsense_Mutation SNP C C T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ZNF347 84671 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53644453 53644453 + Missense_Mutation SNP C C A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ZNF451 26036 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 57013213 57013213 + Missense_Mutation SNP A A C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ZUFSP 221302 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 116979974 116979974 + Missense_Mutation SNP T T C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ANKRD20B 0 broad.mit.edu 37 2 95497757 95497757 + RNA SNP C G G novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a ATP2B2 491 broad.mit.edu 37 3 10401807 10401807 + Missense_Mutation SNP G T T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a C1orf94 84970 broad.mit.edu 37 1 34666597 34666597 + Nonsense_Mutation SNP C T T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a FNDC1 84624 broad.mit.edu 37 6 159653887 159653887 + Silent SNP G T T novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a KRTAP4-9 100132386 broad.mit.edu 37 17 39261693 39261693 + Missense_Mutation SNP A T T rs113059833 bycluster TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a MALAT1 378938 broad.mit.edu 37 11 65270349 65270349 + RNA SNP T C C novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a PRAMEF10 343071 broad.mit.edu 37 1 12954436 12954436 + Missense_Mutation SNP G A A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a Unknown 0 broad.mit.edu 37 16 90161578 90161578 + Silent SNP G A A rs13337896 bycluster;by2hit2allele TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a CDC27 996 broad.mit.edu 37 17 45234696 45234696 + Missense_Mutation SNP C A A novel TCGA-A3-3382-01A-01D-0966-08 TCGA-A3-3382-11A-01D-0966-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx f10e1718-6fb8-4c08-bc28-439f26355cd2 9e5e7403-d655-4c63-b938-e8140224dd7a