Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	TranscriptID	Exon	ChromChange	AAChange	COSMIC_Codon	COSMIC_Gene	Drug_Target
C10orf72	196740	broad.mit.edu	36	10	49925037	49925037	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001031746	exon7	c.G834A	p.T278T	.	.	.
RTKN2	219790	broad.mit.edu	36	10	63628080	63628080	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_145307	exon12	c.G1423C	p.D475H	.	.	.
MYST4	23522	broad.mit.edu	36	10	76450506	76450506	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_012330	exon14	c.G2790A	p.A930A	.	.	.
DUSP13	51207	broad.mit.edu	36	10	76525534	76525534	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_016364	exon3	c.C199G	p.L67V	.	.	.
ITIH5	80760	broad.mit.edu	36	10	7719324	7719324	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_030569	exon5	c.C525T	p.S175S	.	.	.
WAPAL	23063	broad.mit.edu	36	10	88250161	88250161	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_015045	exon3	c.A819C	p.E273D	.	.	.
MUC6	4588	broad.mit.edu	36	11	1017447	1017447	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_005961	exon17	c.G2052A	p.L684L	.	.	.
PDGFD	80310	broad.mit.edu	36	11	103303003	103303003	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_033135	exon6	c.G816A	p.S272S	.	.	.
LDHC	3948	broad.mit.edu	36	11	18424420	18424420	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002301	exon7	c.T798C	p.N266N	.	.	.
MTA2	9219	broad.mit.edu	36	11	62122083	62122083	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_004739	exon6	c.G479A	p.R160H	.	.	.
GANAB	23193	broad.mit.edu	36	11	62163055	62163055	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_198335	exon4	c.T356C	p.L119S	.	.	.
CTSC	1075	broad.mit.edu	36	11	87673372	87673372	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001814	exon5	c.A731G	p.N244S	.	.	.
CNTN5	53942	broad.mit.edu	36	11	99446489	99446489	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_175566	exon10	c.C1064A	p.P355H	.	.	.
C12orf68	387856	broad.mit.edu	36	12	46864676	46864677	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001013635	exon1	c.504_505insG	p.L168fs	.	.	.
CELA1	1990	broad.mit.edu	36	12	50026680	50026681	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	-	-	-	-	-	-	Unknown	Wildtype	None	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001971	exon1	c.10_11insG	p.L4fs	.	.	.
CAND1	55832	broad.mit.edu	36	12	65985544	65985544	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018448	exon10	c.A1829C	p.N610T	.	.	.
TRHDE	29953	broad.mit.edu	36	12	70953573	70953573	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_013381	exon1	c.C748T	p.R250C	.	.	.
LUM	4060	broad.mit.edu	36	12	90026380	90026380	+	Silent	SNP	G	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002345	exon2	c.C508A	p.R170R	.	.	.
FGD6	55785	broad.mit.edu	36	12	94009614	94009614	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018351	exon17	c.G3850T	p.D1284Y	.	.	.
CELA1	1990	broad.mit.edu	36	12	50026682	50026683	+	Frame_Shift_Del	DEL	AC	-	-	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	AC	AC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001971	exon1	c.7_8del	p.3_3del	.	.	.
C12orf67	144360	broad.mit.edu	36	12	24628117	24628117	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	.	.	.	.	.	.	.
ATP12A	479	broad.mit.edu	36	13	24174176	24174176	+	Missense_Mutation	SNP	G	A	A	rs34864304	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001185085	exon14	c.G2003A	p.R668H	.	.	.
FREM2	341640	broad.mit.edu	36	13	38323838	38323838	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_207361	exon11	c.T6758G	p.F2253C	.	.	.
SLITRK5	26050	broad.mit.edu	36	13	87126680	87126680	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_015567	exon2	c.T1036C	p.S346P	.	.	.
MYH6	4624	broad.mit.edu	36	14	22941520	22941520	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002471	exon12	c.C1134T	p.G378G	.	.	.
KIAA0586	9786	broad.mit.edu	36	14	58049046	58049046	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_014749	exon28	c.A4149T	p.Q1383H	.	.	.
GPHN	10243	broad.mit.edu	36	14	66646644	66646644	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001024218	exon13	c.G1229A	p.R410Q	.	.	.
SERPINA3	12	broad.mit.edu	36	14	94150673	94150673	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001085	exon2	c.G142A	p.G48R	.	.	.
CCPG1	9236	broad.mit.edu	36	15	53465126	53465127	+	Nonsense_Mutation	DNP	GC	AG	AG	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	GC	GC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_004748	exon3	c.138_139CT	.	.	.	.
DIS3L	115752	broad.mit.edu	36	15	64397886	64397886	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001143688	exon8	c.T1040A	p.V347E	.	.	.
MAP2K1	5604	broad.mit.edu	36	15	64514537	64514537	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_002755	exon2	c.G199A	p.D67N	.	.	.
CORO2B	10391	broad.mit.edu	36	15	66724736	66724736	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_006091	exon2	c.G199A	p.V67I	.	.	.
C16orf58	64755	broad.mit.edu	36	16	31410853	31410853	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_022744	exon12	c.G1287T	p.M429I	.	.	.
IRX5	10265	broad.mit.edu	36	16	53525072	53525072	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_005853	exon3	c.C1238T	p.T413M	.	.	.
SLC7A6OS	84138	broad.mit.edu	36	16	66902234	66902234	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_032178	exon1	c.G97A	p.D33N	.	.	.
C17orf97	400566	broad.mit.edu	36	17	263998	263998	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001013672	exon3	c.G1018A	p.E340K	.	.	.
PPM1D	8493	broad.mit.edu	36	17	56095220	56095220	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_003620	exon6	c.A1343G	p.N448S	.	.	.
SMARCD2	6603	broad.mit.edu	36	17	59264696	59264696	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001098426	exon10	c.G1300A	p.A434T	.	.	.
FBXO39	162517	broad.mit.edu	36	17	6624285	6624285	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_153230	exon2	c.G374T	p.R125L	.	.	.
TP53	7157	broad.mit.edu	36	17	7518295	7518295	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001126114	exon7	c.G711T	p.M237I	 TP53,oesophagus,NS,Substitution - Missense,0 	.	.
CCDC40	55036	broad.mit.edu	36	17	75628465	75628465	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_017950	exon3	c.G353A	p.S118N	.	.	.
CTAGE1	64693	broad.mit.edu	36	18	18251410	18251410	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_172241	exon1	c.G363A	p.E121E	.	.	.
SERPINB11	89778	broad.mit.edu	36	18	59539053	59539053	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_080475	exon7	c.T627C	p.N209N	.	.	.
ZNF628	89887	broad.mit.edu	36	19	60686355	60686356	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_033113	exon3	c.1971_1972insC	p.Q657fs	.	.	.
PDE4A	5141	broad.mit.edu	36	19	10439043	10439043	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001111309	exon15	c.G2224A	p.V742M	.	.	.
OR7C1	26664	broad.mit.edu	36	19	14771722	14771722	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_198944	exon1	c.C227T	p.T76M	.	.	.
FCGBP	8857	broad.mit.edu	36	19	45099883	45099883	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_003890	exon9	c.G4678T	p.D1560Y	.	.	.
FCGBP	8857	broad.mit.edu	36	19	45100155	45100155	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_003890	exon8	c.C4524T	p.Y1508Y	.	.	.
ZIK1	284307	broad.mit.edu	36	19	62793229	62793229	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001010879	exon4	c.G238A	p.D80N	.	.	.
VCAM1	7412	broad.mit.edu	36	1	100961364	100961364	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001199834	exon3	c.A355G	p.T119A	.	.	.
FLG	2312	broad.mit.edu	36	1	150543506	150543506	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002016	exon3	c.C10480T	p.Q3494X	.	.	.
CREB3L4	148327	broad.mit.edu	36	1	152213015	152213015	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_130898	exon10	c.T1038C	p.N346N	.	.	.
BCAN	63827	broad.mit.edu	36	1	154888854	154888854	+	Silent	SNP	C	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_021948	exon8	c.C1488G	p.P496P	.	.	.
RASAL2	9462	broad.mit.edu	36	1	176681277	176681277	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_170692	exon9	c.A1484G	p.D495G	.	.	.
LEFTY2	7044	broad.mit.edu	36	1	224193797	224193797	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001172425	exon4	c.G522A	p.L174L	.	.	.
OR2M2	391194	broad.mit.edu	36	1	246410094	246410094	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001004688	exon1	c.C184T	p.L62F	.	.	.
DMBX1	127343	broad.mit.edu	36	1	46745398	46745398	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_172225	exon1	c.G129A	p.A43A	.	.	.
F3	2152	broad.mit.edu	36	1	94771282	94771282	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001993	exon4	c.G543A	p.K181K	.	.	.
SNTA1	6640	broad.mit.edu	36	20	31460049	31460049	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_003098	exon8	c.G1443A	p.S481S	.	.	.
ATRN	8455	broad.mit.edu	36	20	3526644	3526644	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_139322	exon22	c.C3561T	p.D1187D	.	.	.
ZNFX1	57169	broad.mit.edu	36	20	47321558	47321558	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_021035	exon3	c.G198A	p.R66R	.	.	.
PWP2	5822	broad.mit.edu	36	21	44365387	44365387	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_005049	exon13	c.G1612A	p.E538K	.	.	.
PMM1	5372	broad.mit.edu	36	22	40303300	40303300	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002676	exon8	c.A757G	p.I253V	.	.	.
LRP1B	53353	broad.mit.edu	36	2	140969617	140969617	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018557	exon56	c.C9021A	p.C3007X	.	.	.
LRP1B	53353	broad.mit.edu	36	2	141703312	141703312	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018557	exon6	c.G760C	p.E254Q	.	.	.
FAM84A	151354	broad.mit.edu	36	2	14691738	14691738	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_145175	exon2	c.A184C	p.T62P	.	.	.
KCNH7	90134	broad.mit.edu	36	2	162988150	162988150	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_173162	exon8	c.G2075A	p.R692H	.	.	.
FIGN	55137	broad.mit.edu	36	2	164175459	164175459	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018086	exon3	c.A1129G	p.K377E	.	.	.
TTN	7273	broad.mit.edu	36	2	179172019	179172019	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_003319	exon119	c.C29468T	p.P9823L	.	.	.
TTN	7273	broad.mit.edu	36	2	179302387	179302387	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_133378	exon61	c.G15009T	p.L5003F	.	.	.
CCDC150	284992	broad.mit.edu	36	2	197305475	197305475	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001080539	exon28	c.A3250T	p.K1084X	.	.	.
ERBB4	2066	broad.mit.edu	36	2	212361054	212361054	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_005235	exon4	c.T497A	p.I166N	.	.	.
ATP6V1E2	90423	broad.mit.edu	36	2	46593329	46593329	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_080653	exon2	c.A26G	p.K9R	.	.	.
FSHR	2492	broad.mit.edu	36	2	49043753	49043753	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_181446	exon9	c.G1633A	p.A545T	.	.	.
ABI3BP	25890	broad.mit.edu	36	3	102009697	102009697	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_015429	exon19	c.C1670G	p.P557R	.	.	.
WDR52	55779	broad.mit.edu	36	3	114610667	114610667	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001164496	exon7	c.C866G	p.T289S	.	.	.
NEK11	79858	broad.mit.edu	36	3	132311356	132311356	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_024800	exon5	c.A356T	p.K119I	.	.	.
SMC4	10051	broad.mit.edu	36	3	161613972	161613972	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001002800	exon8	c.G998A	p.R333Q	.	.	.
DVL3	1857	broad.mit.edu	36	3	185371046	185371046	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_004423	exon15	c.G1960A	p.G654S	.	.	.
PSMD2	5708	broad.mit.edu	36	3	185502965	185502965	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_002808	exon6	c.A818G	p.N273S	.	.	.
STAC	6769	broad.mit.edu	36	3	36502673	36502673	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_003149	exon5	c.C615T	p.F205F	.	.	.
DOCK3	1795	broad.mit.edu	36	3	51077055	51077055	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_004947	exon6	c.A411G	p.G137G	.	.	.
FBN2	2201	broad.mit.edu	36	5	127756781	127756781	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001999	exon10	c.G1411A	p.V471I	.	.	.
HTR4	3360	broad.mit.edu	36	5	147869383	147869383	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_000870	exon6	c.A905G	p.Y302C	.	.	.
SLC36A3	285641	broad.mit.edu	36	5	150643886	150643886	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_181774	exon8	c.A886G	p.I296V	.	.	.
GRIA1	2890	broad.mit.edu	36	5	153046055	153046055	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001114183	exon8	c.T1107C	p.I369I	.	.	.
GRIA1	2890	broad.mit.edu	36	5	153162120	153162120	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001114183	exon15	c.C2397T	p.S799S	.	.	.
KCNIP1	30820	broad.mit.edu	36	5	169713502	169713502	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001034838	exon1	c.T44G	p.F15C	.	.	.
CDH9	1007	broad.mit.edu	36	5	26938507	26938507	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_016279	exon7	c.C1088G	p.P363R	.	.	.
ADAMTS16	170690	broad.mit.edu	36	5	5359817	5359817	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_139056	exon21	c.C3387A	p.S1129R	.	.	.
POLK	51426	broad.mit.edu	36	5	74908459	74908459	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_016218	exon6	c.T639C	p.N213N	.	.	.
APC	324	broad.mit.edu	36	5	112203493	112203493	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001127511	exon14	c.4249delA	p.R1417fs	 APC,large_intestine,NS,Substitution - Nonsense,0 	.	.
SLC35F1	222553	broad.mit.edu	36	6	118705353	118705353	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001029858	exon6	c.T798C	p.A266A	.	.	.
BCLAF1	9774	broad.mit.edu	36	6	136640974	136640974	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_014739	exon4	c.C738T	p.P246P	.	.	.
SASH1	23328	broad.mit.edu	36	6	148911254	148911254	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_015278	exon20	c.G3611C	p.S1204T	.	.	.
SYNE1	23345	broad.mit.edu	36	6	152502958	152502958	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_015293	exon55	c.C8850T	p.A2950A	.	.	.
CNKSR3	154043	broad.mit.edu	36	6	154804161	154804161	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_173515	exon4	c.A464C	p.K155T	.	.	.
DOPEY1	23033	broad.mit.edu	36	6	83904321	83904321	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_015018	exon21	c.T3841A	p.S1281T	.	.	.
TAX1BP1	8887	broad.mit.edu	36	7	27798210	27798210	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_006024	exon9	c.C1099T	p.R367W	.	.	.
CARD11	84433	broad.mit.edu	36	7	2936223	2936223	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_032415	exon12	c.G1582A	p.E528K	.	.	.
ZNF804B	219578	broad.mit.edu	36	7	88794614	88794614	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_181646	exon3	c.A270T	p.Q90H	.	.	.
SAMD9	54809	broad.mit.edu	36	7	92569798	92569798	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001193307	exon2	c.G3549A	p.P1183P	.	.	.
SGCE	8910	broad.mit.edu	36	7	94095551	94095551	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_003919	exon3	c.C289T	p.R97X	.	.	.
VPS13B	157680	broad.mit.edu	36	8	100930279	100930279	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_152564	exon55	c.A10042G	p.I3348V	.	.	.
WRN	7486	broad.mit.edu	36	8	31057938	31057938	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_000553	exon9	c.C853G	p.L285V	.	.	.
MOS	4342	broad.mit.edu	36	8	57188122	57188122	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_005372	exon1	c.C974T	p.A325V	.	.	.
NCOA2	10499	broad.mit.edu	36	8	71234308	71234308	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_006540	exon10	c.A1110G	p.L370L	.	.	.
ZFHX4	79776	broad.mit.edu	36	8	77779834	77779834	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_024721	exon2	c.C956T	p.S319F	.	.	.
ABCA1	19	broad.mit.edu	36	9	106594038	106594038	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_005502	exon43	c.G5820C	p.E1940D	.	.	.
TOPORS	10210	broad.mit.edu	36	9	32532035	32532035	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001195622	exon2	c.T2293C	p.S765P	.	.	.
RNF38	152006	broad.mit.edu	36	9	36359716	36359716	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_194330	exon4	c.G321A	p.Q107Q	.	.	.
FRMPD1	22844	broad.mit.edu	36	9	37682640	37682640	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_014907	exon2	c.T2C	p.M1T	.	.	.
KIAA2026	158358	broad.mit.edu	36	9	5997456	5997456	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001017969	exon1	c.C332T	p.A111V	.	.	.
ODZ1	10178	broad.mit.edu	36	X	123613463	123613463	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_014253	exon8	c.G1561A	p.V521M	.	.	.
GSPT2	23708	broad.mit.edu	36	X	51503924	51503924	+	Silent	SNP	A	G	G	novel	unknown	TCGA-AY-4071-01A-01W-1073-09	TCGA-AY-4071-10A-01W-1073-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_018094	exon1	c.A462G	p.K154K	.	.	.