Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target ITGA8 8516 broad.mit.edu 36 10 15698561 15698561 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003638 exon14 c.1403delT p.L468X . . . ADK 132 broad.mit.edu 36 10 75955023 75955023 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001123 exon7 c.508delT p.F170fs . . . HPSE2 60495 broad.mit.edu 36 10 100471561 100471561 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166244 exon4 c.C625T p.R209W . . . CNNM1 26507 broad.mit.edu 36 10 101080297 101080297 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020348 exon1 c.T1163C p.I388T . . . GOT1 2805 broad.mit.edu 36 10 101147376 101147376 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002079 exon9 c.G1160A p.R387Q . . . GOT1 2805 broad.mit.edu 36 10 101155886 101155886 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002079 exon4 c.G535A p.E179K . . . ABCC2 1244 broad.mit.edu 36 10 101557179 101557179 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000392 exon12 c.A1579C p.N527H . . . ABCC2 1244 broad.mit.edu 36 10 101580542 101580542 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000392 exon21 c.G2827A p.E943K . . . DNMBP 23268 broad.mit.edu 36 10 101633926 101633926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015221 exon15 c.C3829T p.R1277W . . . DNMBP 23268 broad.mit.edu 36 10 101706901 101706901 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015221 exon4 c.G320A p.R107Q . . . CHUK 1147 broad.mit.edu 36 10 101949760 101949760 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001278 exon16 c.C1687T p.R563C . . . CHUK 1147 broad.mit.edu 36 10 101968805 101968805 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001278 exon7 c.A639C p.E213D . . . CWF19L1 55280 broad.mit.edu 36 10 101987800 101987800 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018294 exon11 c.G1223T p.R408I . . . PKD2L1 9033 broad.mit.edu 36 10 102041161 102041161 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016112 exon12 c.G1894A p.E632K . . . PAX2 5076 broad.mit.edu 36 10 102499536 102499536 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003988 exon2 c.C87T p.N29N . . . FAM178A 55719 broad.mit.edu 36 10 102667012 102667012 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018121 exon3 c.G880T p.D294Y . . . FAM178A 55719 broad.mit.edu 36 10 102674227 102674227 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018121 exon5 c.T1479G p.N493K . . . SEMA4G 57715 broad.mit.edu 36 10 102728855 102728855 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017893 exon8 c.C820A p.L274M . . . SEMA4G 57715 broad.mit.edu 36 10 102730954 102730954 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017893 exon13 c.C1683A p.G561G . . . C10orf2 56652 broad.mit.edu 36 10 102739479 102739479 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021830 exon2 c.C1332T p.F444F . . . PDZD7 79955 broad.mit.edu 36 10 102767915 102767915 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195263 exon9 c.C1453T p.R485C . . . POLL 27343 broad.mit.edu 36 10 103332579 103332579 + Silent SNP G A A rs41291484 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174085 exon7 c.C849T p.I283I . . . NPM3 10360 broad.mit.edu 36 10 103533024 103533024 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006993 exon1 c.C114A p.F38L . . . KCNIP2 30819 broad.mit.edu 36 10 103577691 103577691 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173194 exon6 c.C512T p.T171M . . . C10orf76 79591 broad.mit.edu 36 10 103597290 103597290 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024541 exon26 c.C2055A p.F685L . . . C10orf76 79591 broad.mit.edu 36 10 103751779 103751779 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024541 exon15 c.G1089A p.Q363Q . . . PPRC1 23082 broad.mit.edu 36 10 103888401 103888401 + Silent SNP G A A rs9971147 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015062 exon3 c.G378A p.S126S . . . PPRC1 23082 broad.mit.edu 36 10 103890543 103890543 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015062 exon5 c.G2288A p.R763H . . . NFKB2 4791 broad.mit.edu 36 10 104146046 104146046 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077494 exon3 c.C68A p.S23Y . . . CYP17A1 1586 broad.mit.edu 36 10 104587069 104587069 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000102 exon1 c.T40C p.Y14H . . . C10orf32 119032 broad.mit.edu 36 10 104610139 104610139 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144591 exon2 c.G202T p.D68Y . . . NT5C2 22978 broad.mit.edu 36 10 104851033 104851033 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134373 exon6 c.C430T p.R144X . . . GTPBP4 23560 broad.mit.edu 36 10 1050223 1050223 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012341 exon15 c.C1579A p.L527I . . . PDCD11 22984 broad.mit.edu 36 10 105163739 105163739 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014976 exon10 c.C1212A p.N404K . . . NEURL 9148 broad.mit.edu 36 10 105340109 105340109 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004210 exon6 c.G1715A p.R572H . . . SH3PXD2A 9644 broad.mit.edu 36 10 105351575 105351575 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014631 exon14 c.G3306A p.E1102E . . . SLK 9748 broad.mit.edu 36 10 105752212 105752212 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014720 exon9 c.A1286C p.K429T . . . SLK 9748 broad.mit.edu 36 10 105771440 105771440 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014720 exon18 c.G3520A p.E1174K . . . COL17A1 1308 broad.mit.edu 36 10 105799217 105799217 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000494 exon29 c.G2167A p.E723K . . . C10orf79 80217 broad.mit.edu 36 10 105928805 105928805 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025145 exon19 c.A2432C p.K811T . . . ITPRIP 85450 broad.mit.edu 36 10 106065167 106065167 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033397 exon3 c.C633T p.F211F . . . CCDC147 159686 broad.mit.edu 36 10 106199939 106199939 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008723 exon17 c.G2497T p.E833X . . . SORCS3 22986 broad.mit.edu 36 10 106972982 106972982 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014978 exon20 c.C2853T p.F951F . . . SORCS3 22986 broad.mit.edu 36 10 107012133 107012133 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014978 exon26 c.G3498T p.E1166D . . . SORCS1 114815 broad.mit.edu 36 10 108459029 108459029 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052918 exon7 c.T1085G p.F362C . . . SMC3 9126 broad.mit.edu 36 10 112349520 112349520 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005445 exon21 c.G2387T p.R796I . . . SHOC2 8036 broad.mit.edu 36 10 112757365 112757365 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007373 exon6 c.G1248T p.K416N . . . GPAM 57678 broad.mit.edu 36 10 113918234 113918234 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020918 exon11 c.G933T p.E311D . . . GPAM 57678 broad.mit.edu 36 10 113918630 113918630 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020918 exon10 c.G865T p.D289Y . . . TECTB 6975 broad.mit.edu 36 10 114034291 114034291 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058222 exon2 c.C85A p.L29I . . . TCF7L2 6934 broad.mit.edu 36 10 114915308 114915308 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146284 exon13 c.A1293C p.E431D . . . HABP2 3026 broad.mit.edu 36 10 115327792 115327792 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177660 exon6 c.C388T p.P130S . . . TDRD1 56165 broad.mit.edu 36 10 115976972 115976972 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198795 exon23 c.C3327T p.V1109V . . . VWA2 340706 broad.mit.edu 36 10 116004774 116004774 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198496 exon4 c.G238A p.G80S . . . FAM160B1 57700 broad.mit.edu 36 10 116580672 116580672 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020940 exon2 c.G117T p.E39D . . . PNLIP 5406 broad.mit.edu 36 10 118295622 118295622 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000936 exon2 c.C28A p.L10M . . . PNLIPRP1 5407 broad.mit.edu 36 10 118341958 118341958 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006229 exon4 c.A245T p.N82I . . . PNLIPRP1 5407 broad.mit.edu 36 10 118350669 118350669 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006229 exon10 c.C1029A p.F343L . . . KCNK18 338567 broad.mit.edu 36 10 118959400 118959400 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181840 exon3 c.C755T p.S252L . . . EMX2 2018 broad.mit.edu 36 10 119295199 119295199 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004098 exon2 c.G473A p.R158Q . . . RAB11FIP2 22841 broad.mit.edu 36 10 119795338 119795338 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014904 exon1 c.T327G p.F109L . . . EIF3A 8661 broad.mit.edu 36 10 120785648 120785648 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003750 exon22 c.G4042T p.E1348X . . . EIF3A 8661 broad.mit.edu 36 10 120791642 120791642 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003750 exon19 c.G3380T p.R1127I . . . BAG3 9531 broad.mit.edu 36 10 121426424 121426424 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004281 exon4 c.G1368A p.E456E . . . INPP5F 22876 broad.mit.edu 36 10 121531168 121531168 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014937 exon3 c.G210T p.Q70H . . . INPP5F 22876 broad.mit.edu 36 10 121541482 121541482 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014937 exon5 c.A556T p.N186Y . . . INPP5F 22876 broad.mit.edu 36 10 121561318 121561318 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014937 exon15 c.G1747T p.E583X . . . C10orf119 79892 broad.mit.edu 36 10 121606842 121606842 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024834 exon5 c.G427T p.E143X . . . C10orf119 79892 broad.mit.edu 36 10 121608668 121608668 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024834 exon3 c.G160A p.E54K . . . SEC23IP 11196 broad.mit.edu 36 10 121648196 121648196 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007190 exon2 c.C431T p.A144V . . . DHTKD1 55526 broad.mit.edu 36 10 12166664 12166664 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018706 exon3 c.G430T p.D144Y . . . WDR11 55717 broad.mit.edu 36 10 122633369 122633369 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018117 exon14 c.C1827T p.N609N . . . WDR11 55717 broad.mit.edu 36 10 122640304 122640304 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018117 exon19 c.C2430A p.I810I . . . ATE1 11101 broad.mit.edu 36 10 123649457 123649457 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001976 exon7 c.G856T p.A286S . . . TACC2 10579 broad.mit.edu 36 10 123832186 123832186 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206862 exon4 c.G181A p.A61T . . . HTRA1 5654 broad.mit.edu 36 10 124238953 124238953 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002775 exon3 c.C598T p.P200S . . . HTRA1 5654 broad.mit.edu 36 10 124258205 124258205 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002775 exon6 c.G1049T p.G350V . . . DMBT1 1755 broad.mit.edu 36 10 124329162 124329162 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007329 exon10 c.G758A p.G253D . . . DMBT1 1755 broad.mit.edu 36 10 124329258 124329258 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007329 exon10 c.G854A p.G285E . . . CHST15 51363 broad.mit.edu 36 10 125794360 125794360 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015892 exon3 c.C612A p.F204L . . . METTL10 399818 broad.mit.edu 36 10 126444109 126444109 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212554 exon5 c.A458C p.K153T . . . FAM175B 23172 broad.mit.edu 36 10 126507427 126507427 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032182 exon6 c.G571T p.E191X . . . CTBP2 1488 broad.mit.edu 36 10 126706294 126706294 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022802 exon1 c.A25C p.N9H . . . ADAM12 8038 broad.mit.edu 36 10 127957502 127957502 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003474 exon3 c.G232T p.E78X . . . C10orf90 118611 broad.mit.edu 36 10 128104604 128104604 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004298 exon8 c.A2007C p.Q669H . . . C10orf90 118611 broad.mit.edu 36 10 128108360 128108360 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004298 exon7 c.T1947C p.H649H . . . C10orf90 118611 broad.mit.edu 36 10 128183024 128183024 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004298 exon3 c.G735A p.P245P . . . C10orf90 118611 broad.mit.edu 36 10 128183303 128183303 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004298 exon3 c.C456T p.R152R . . . DOCK1 1793 broad.mit.edu 36 10 128688483 128688483 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001380 exon10 c.C907T p.R303C . . . PTPRE 5791 broad.mit.edu 36 10 129771100 129771100 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006504 exon21 c.C2043A p.F681L . . . MKI67 4288 broad.mit.edu 36 10 129792730 129792730 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145966 exon12 c.C6284A p.T2095N . . . MKI67 4288 broad.mit.edu 36 10 129795795 129795795 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145966 exon12 c.G3219A p.A1073A . . . GLRX3 10539 broad.mit.edu 36 10 131867635 131867635 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199868 exon11 c.G997A p.G333R . . . OPTN 10133 broad.mit.edu 36 10 13207536 13207536 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008212 exon10 c.G1111A p.E371K . . . MCM10 55388 broad.mit.edu 36 10 13254449 13254449 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018518 exon4 c.A417G p.K139K . . . MCM10 55388 broad.mit.edu 36 10 13277249 13277249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018518 exon14 c.C1948A p.L650M . . . TCERG1L 256536 broad.mit.edu 36 10 132834821 132834821 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174937 exon7 c.G1127A p.R376H . . . UCMA 221044 broad.mit.edu 36 10 13311636 13311636 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145314 exon4 c.C300T p.F100F . . . PPP2R2D 55844 broad.mit.edu 36 10 133611210 133611210 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018461 exon6 c.G909A p.A303A . . . INPP5A 3632 broad.mit.edu 36 10 134313913 134313913 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005539 exon4 c.G220T p.E74X . . . ECHS1 1892 broad.mit.edu 36 10 135028214 135028214 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004092 exon7 c.G745T p.E249X . . . CYP2E1 1571 broad.mit.edu 36 10 135195714 135195714 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000773 exon4 c.A584C p.K195T . . . BEND7 222389 broad.mit.edu 36 10 13582070 13582070 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152751 exon3 c.A6C p.E2D . . . PRPF18 8559 broad.mit.edu 36 10 13682308 13682308 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003675 exon3 c.T203G p.L68R . . . FRMD4A 55691 broad.mit.edu 36 10 13776003 13776003 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018027 exon15 c.G1018A p.D340N . . . FRMD4A 55691 broad.mit.edu 36 10 13843663 13843663 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018027 exon8 c.G454T p.D152Y . . . FAM188A 80013 broad.mit.edu 36 10 15864212 15864212 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024948 exon14 c.C1136A p.S379Y . . . CUBN 8029 broad.mit.edu 36 10 16951658 16951658 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon59 c.C9437A p.S3146Y . . . CUBN 8029 broad.mit.edu 36 10 16988263 16988263 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon50 c.T7857G p.D2619E . . . CUBN 8029 broad.mit.edu 36 10 17036548 17036548 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon32 c.C4701T p.Y1567Y . . . CUBN 8029 broad.mit.edu 36 10 17166457 17166457 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081 exon17 c.G2120A p.R707H . . . TRDMT1 1787 broad.mit.edu 36 10 17250881 17250881 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004412 exon3 c.G216T p.M72I . . . ST8SIA6 338596 broad.mit.edu 36 10 17403219 17403219 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004470 exon8 c.C861T p.L287L . . . ST8SIA6 338596 broad.mit.edu 36 10 17409076 17409076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004470 exon6 c.G578A p.G193E . . . SLC39A12 221074 broad.mit.edu 36 10 18310291 18310291 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145195 exon6 c.G969T p.K323N . . . NSUN6 221078 broad.mit.edu 36 10 18943480 18943480 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182543 exon5 c.G490T p.E164X . . . PLXDC2 84898 broad.mit.edu 36 10 20546376 20546376 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032812 exon11 c.T1138C p.C380R . . . C10orf140 387640 broad.mit.edu 36 10 21844857 21844857 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207371 exon4 c.A1901G p.K634R . . . MLLT10 8028 broad.mit.edu 36 10 21999479 21999479 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195626 exon9 c.C891A p.V297V . . . MLLT10 8028 broad.mit.edu 36 10 22002641 22002641 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195626 exon10 c.G1408T p.G470X . . . SPAG6 9576 broad.mit.edu 36 10 22697431 22697431 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172242 exon4 c.G290A p.R97H . . . SPAG6 9576 broad.mit.edu 36 10 22739990 22739990 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012443 exon10 c.C1339T p.R447X . . . PIP4K2A 5305 broad.mit.edu 36 10 23043187 23043187 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005028 exon1 c.G75A p.A25A . . . ARMC3 219681 broad.mit.edu 36 10 23366250 23366250 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173081 exon19 c.G2455A p.E819K . . . ARHGAP21 57584 broad.mit.edu 36 10 24924721 24924721 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020824 exon19 c.G3643T p.D1215Y . . . ENKUR 219670 broad.mit.edu 36 10 25313717 25313717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145010 exon5 c.G718A p.D240N . . . THNSL1 79896 broad.mit.edu 36 10 25352255 25352255 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024838 exon3 c.C97A p.L33I . . . THNSL1 79896 broad.mit.edu 36 10 25352706 25352706 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024838 exon3 c.A548C p.K183T . . . GPR158 57512 broad.mit.edu 36 10 25741369 25741369 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon4 c.C1296T p.F432F . . . GPR158 57512 broad.mit.edu 36 10 25901765 25901765 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon7 c.G1696A p.D566N . . . GPR158 57512 broad.mit.edu 36 10 25926868 25926868 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020752 exon11 c.C2307T p.C769C . . . MYO3A 53904 broad.mit.edu 36 10 26425328 26425328 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017433 exon16 c.T1575G p.N525K MYO3A,ovary,NS,Substitution - Missense,0 . . MYO3A 53904 broad.mit.edu 36 10 26503137 26503137 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017433 exon30 c.G3938A p.R1313H . . . ANKRD26 22852 broad.mit.edu 36 10 27363993 27363993 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014915 exon24 c.C3392T p.S1131F . . . ANKRD26 22852 broad.mit.edu 36 10 27364216 27364216 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014915 exon24 c.G3169T p.D1057Y . . . MASTL 84930 broad.mit.edu 36 10 27490088 27490088 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172303 exon4 c.T524G p.F175C . . . PTCHD3 374308 broad.mit.edu 36 10 27727472 27727472 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034842 exon4 c.C2061A p.V687V . . . ZMYND11 10771 broad.mit.edu 36 10 278048 278048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212479 exon10 c.G916A p.D306N . . . ARMC4 55130 broad.mit.edu 36 10 28324014 28324014 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018076 exon2 c.G64A p.E22K . . . WAC 51322 broad.mit.edu 36 10 28940731 28940731 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_100486 exon9 c.G1002A p.P334P . . . SVIL 6840 broad.mit.edu 36 10 29822178 29822178 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003174 exon19 c.C2712T p.F904F . . . ZEB1 6935 broad.mit.edu 36 10 31831298 31831298 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030751 exon4 c.C336T p.C112C . . . EPC1 80314 broad.mit.edu 36 10 32621524 32621524 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025209 exon5 c.C721A p.L241I . . . CCDC7 221016 broad.mit.edu 36 10 32894520 32894520 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145023 exon15 c.A1163C p.K388T . . . ITGB1 3688 broad.mit.edu 36 10 33230522 33230522 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133376 exon16 c.G2379A p.P793P . . . ITGB1 3688 broad.mit.edu 36 10 33237323 33237323 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133376 exon15 c.A2310C p.K770N . . . PARD3 56288 broad.mit.edu 36 10 34440373 34440373 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184791 exon21 c.C3465T p.N1155N . . . CUL2 8453 broad.mit.edu 36 10 35367986 35367986 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198779 exon9 c.C784T p.R262X . . . ANKRD30A 91074 broad.mit.edu 36 10 37459191 37459191 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052997 exon3 c.C221T p.A74V . . . ANKRD30A 91074 broad.mit.edu 36 10 37476306 37476306 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052997 exon9 c.T1290C p.S430S . . . ANKRD30A 91074 broad.mit.edu 36 10 37548144 37548144 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052997 exon34 c.G3330A p.G1110G . . . ZNF33A 7581 broad.mit.edu 36 10 38346272 38346272 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006954 exon4 c.G202T p.E68X . . . ZNF33A 7581 broad.mit.edu 36 10 38384419 38384419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006954 exon5 c.C1361T p.S454L . . . ZNF33A 7581 broad.mit.edu 36 10 38384648 38384648 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006954 exon5 c.T1590C p.C530C . . . ZNF37A 7587 broad.mit.edu 36 10 38447739 38447739 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007094 exon8 c.A1654C p.N552H . . . ZNF33B 7582 broad.mit.edu 36 10 42410009 42410009 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006955 exon5 c.C395A p.S132Y . . . BMS1 9790 broad.mit.edu 36 10 42599904 42599904 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014753 exon2 c.C56G p.A19G . . . RET 5979 broad.mit.edu 36 10 42932168 42932168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020630 exon12 c.C2267T p.A756V . . . ZNF239 8187 broad.mit.edu 36 10 43372543 43372543 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005674 exon2 c.C991T p.R331C . . . ZNF239 8187 broad.mit.edu 36 10 43372864 43372864 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005674 exon2 c.C670T p.L224F . . . ZNF32 7580 broad.mit.edu 36 10 43459893 43459893 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006973 exon3 c.C433T p.R145X . . . OR13A1 79290 broad.mit.edu 36 10 45119160 45119160 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004297 exon4 c.C717T p.I239I . . . ALOX5 240 broad.mit.edu 36 10 45227682 45227682 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000698 exon4 c.G469A p.D157N . . . MARCH8 220972 broad.mit.edu 36 10 45273765 45273765 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002266 exon7 c.C804A p.I268I . . . MARCH8 220972 broad.mit.edu 36 10 45276738 45276738 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002266 exon5 c.G370A p.E124K . . . ANUBL1 93550 broad.mit.edu 36 10 45463755 45463755 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128324 exon5 c.C562T p.R188C . . . FAM21C 253725 broad.mit.edu 36 10 45568110 45568110 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001169106 exon12 c.G1072T p.G358C . . . FAM21C 253725 broad.mit.edu 36 10 45570419 45570419 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001169106 exon15 c.G1270A p.V424I . . . FAM21C 253725 broad.mit.edu 36 10 45570538 45570538 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001169106 exon15 c.C1389A p.F463L . . . FAM21C 253725 broad.mit.edu 36 10 45585063 45585063 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001169106 exon20 c.C2030T p.A677V . . . GDF10 2662 broad.mit.edu 36 10 48046764 48046764 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004962 exon3 c.G1249A p.V417I . . . GDF10 2662 broad.mit.edu 36 10 48048836 48048836 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004962 exon2 c.G1056A p.S352S . . . FRMPD2 143162 broad.mit.edu 36 10 49063638 49063638 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018071 exon18 c.C2323T p.R775C . . . ERCC6 2074 broad.mit.edu 36 10 50351632 50351632 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000124 exon14 c.A2606G p.D869G . . . PGBD3 267004 broad.mit.edu 36 10 50394332 50394332 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170753 exon2 c.C835T p.R279C . . . ERCC6 2074 broad.mit.edu 36 10 50402137 50402137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000124 exon5 c.G1345A p.V449M . . . SLC18A3 6572 broad.mit.edu 36 10 50489677 50489677 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003055 exon1 c.C885T p.A295A . . . SLC18A3 6572 broad.mit.edu 36 10 50489932 50489932 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003055 exon1 c.C1140T p.F380F . . . CHAT 1103 broad.mit.edu 36 10 50497883 50497883 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142929 exon3 c.T140G p.I47S . . . PARG 8505 broad.mit.edu 36 10 51262617 51262617 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006327 exon7 c.C523T p.R175X . . . SGMS1 259230 broad.mit.edu 36 10 51741137 51741137 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147156 exon9 c.C786A p.L262L . . . SGMS1 259230 broad.mit.edu 36 10 51757067 51757067 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147156 exon8 c.T645G p.F215L . . . AKR1C4 1109 broad.mit.edu 36 10 5237767 5237767 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001818 exon4 c.C417T p.F139F . . . TUBAL3 79861 broad.mit.edu 36 10 5426206 5426206 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171864 exon4 c.G495A p.T165T . . . TUBAL3 79861 broad.mit.edu 36 10 5426333 5426333 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171864 exon4 c.G368A p.R123K . . . NET1 10276 broad.mit.edu 36 10 5478793 5478793 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005863 exon1 c.T65C p.V22A . . . Unknown 0 broad.mit.edu 36 10 55236580 55236580 + IGR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142771 exon35 c.A4814C p.K1605T . . . Unknown 0 broad.mit.edu 36 10 55238843 55238843 + IGR SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142769 exon36 c.A4988G p.N1663S . . . PCDH15 65217 broad.mit.edu 36 10 55251713 55251713 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033056 exon33 c.G5779T p.E1927X . . . PCDH15 65217 broad.mit.edu 36 10 55252418 55252418 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033056 exon33 c.T5074A p.S1692T . . . PCDH15 65217 broad.mit.edu 36 10 55582995 55582995 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142769 exon16 c.C1691A p.A564D . . . PCDH15 65217 broad.mit.edu 36 10 55666672 55666672 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142769 exon10 c.C917T p.T306M . . . C10orf18 54906 broad.mit.edu 36 10 5843323 5843323 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017782 exon19 c.G7057A p.E2353K . . . FBXO18 84893 broad.mit.edu 36 10 5992932 5992932 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178150 exon6 c.C1046T p.A349V . . . FBXO18 84893 broad.mit.edu 36 10 6009479 6009479 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178150 exon19 c.A2798C p.K933T . . . IL2RA 3559 broad.mit.edu 36 10 6101884 6101884 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000417 exon5 c.G610A p.E204K . . . ANK3 288 broad.mit.edu 36 10 61485489 61485489 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon42 c.C12998A p.S4333Y . . . ANK3 288 broad.mit.edu 36 10 61499106 61499106 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020987 exon37 c.C11539A p.L3847I . . . RHOBTB1 9886 broad.mit.edu 36 10 62304776 62304776 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014836 exon9 c.C1757T p.A586V . . . TMEM26 219623 broad.mit.edu 36 10 62858741 62858741 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178505 exon4 c.C554T p.A185V . . . ARID5B 84159 broad.mit.edu 36 10 63522313 63522313 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032199 exon10 c.C3085T p.R1029W . . . EGR2 1959 broad.mit.edu 36 10 64243274 64243274 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136179 exon3 c.G980A p.R327H . . . JMJD1C 221037 broad.mit.edu 36 10 64607585 64607585 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004241 exon20 c.C6411G p.D2137E . . . LRRTM3 347731 broad.mit.edu 36 10 68357140 68357140 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178011 exon2 c.C460T p.R154W . . . HERC4 26091 broad.mit.edu 36 10 69443918 69443918 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022079 exon9 c.G940T p.G314X . . . DNA2 1763 broad.mit.edu 36 10 69862018 69862018 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080449 exon12 c.T2082G p.S694R . . . DNA2 1763 broad.mit.edu 36 10 69888919 69888919 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080449 exon5 c.G925T p.D309Y . . . TET1 80312 broad.mit.edu 36 10 70002962 70002962 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030625 exon2 c.G861A p.L287L . . . HKDC1 80201 broad.mit.edu 36 10 70695456 70695456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025130 exon17 c.C2482T p.R828W . . . COL13A1 1305 broad.mit.edu 36 10 71324463 71324463 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080800 exon11 c.G630T p.K210N . . . KIAA1274 27143 broad.mit.edu 36 10 71977160 71977160 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014431 exon18 c.G2214A p.T738T . . . C10orf27 219793 broad.mit.edu 36 10 72202307 72202307 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152710 exon10 c.G939T p.K313N . . . UNC5B 219699 broad.mit.edu 36 10 72716466 72716466 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170744 exon5 c.G567T p.K189N . . . SLC29A3 55315 broad.mit.edu 36 10 72786003 72786003 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174098 exon5 c.C770T p.A257V . . . SFMBT2 57713 broad.mit.edu 36 10 7284453 7284453 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029880 exon13 c.G1482T p.E494D . . . CDH23 64072 broad.mit.edu 36 10 73076262 73076262 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171930 exon13 c.C1331T p.A444V . . . CDH23 64072 broad.mit.edu 36 10 73237390 73237390 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171933 exon12 c.G1700T p.S567I . . . SFMBT2 57713 broad.mit.edu 36 10 7325554 7325554 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029880 exon9 c.A1092C p.K364N . . . OIT3 170392 broad.mit.edu 36 10 74328677 74328677 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152635 exon2 c.C311A p.A104D . . . OIT3 170392 broad.mit.edu 36 10 74354196 74354196 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152635 exon7 c.G1155T p.G385G . . . NUDT13 25961 broad.mit.edu 36 10 74556461 74556461 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015901 exon8 c.G728A p.R243H . . . ECD 11319 broad.mit.edu 36 10 74566590 74566590 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135753 exon12 c.G1453A p.E485K . . . ANXA7 310 broad.mit.edu 36 10 74809959 74809959 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001156 exon10 c.C925T p.R309C . . . ZMYND17 118490 broad.mit.edu 36 10 74854347 74854347 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024593 exon7 c.A1353C p.Q451H . . . ZMYND17 118490 broad.mit.edu 36 10 74857886 74857886 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024593 exon2 c.C163A p.P55T . . . USP54 159195 broad.mit.edu 36 10 74966126 74966126 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152586 exon9 c.G1051T p.D351Y . . . SYNPO2L 79933 broad.mit.edu 36 10 75076888 75076888 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024875 exon2 c.G1856A p.G619D . . . SYNPO2L 79933 broad.mit.edu 36 10 75077662 75077662 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024875 exon2 c.C1082A p.S361Y . . . AP3M1 26985 broad.mit.edu 36 10 75556063 75556063 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012095 exon7 c.C860A p.S287Y . . . DUSP13 51207 broad.mit.edu 36 10 76524566 76524566 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007273 exon6 c.G750T p.E250D . . . KCNMA1 3778 broad.mit.edu 36 10 78317035 78317035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161353 exon28 c.C3655T p.L1219F . . . KCNMA1 3778 broad.mit.edu 36 10 78383577 78383577 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014797 exon21 c.G2310T p.E770D . . . POLR3A 11128 broad.mit.edu 36 10 79423107 79423107 + Missense_Mutation SNP C A A rs57636571 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007055 exon20 c.G2641T p.D881Y . . . POLR3A 11128 broad.mit.edu 36 10 79434543 79434543 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007055 exon16 c.C2184T p.I728I . . . TAF3 83860 broad.mit.edu 36 10 8046653 8046653 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031923 exon3 c.G1174A p.D392N . . . GATA3 2625 broad.mit.edu 36 10 8140476 8140476 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002051 exon3 c.G444A p.P148P . . . SFTPD 6441 broad.mit.edu 36 10 81687840 81687840 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003019 exon8 c.C876T p.R292R . . . ANXA11 311 broad.mit.edu 36 10 81913864 81913864 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145869 exon10 c.G874T p.E292X . . . MAT1A 4143 broad.mit.edu 36 10 82033664 82033664 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000429 exon3 c.G280T p.D94Y . . . TUBB8 347688 broad.mit.edu 36 10 83719 83719 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177987 exon4 c.G613A p.E205K . . . NRG3 10718 broad.mit.edu 36 10 84108502 84108502 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165973 exon3 c.C188A p.S63Y . . . NRG3 10718 broad.mit.edu 36 10 84734985 84734985 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165973 exon11 c.T1144G p.S382A . . . LRIT1 26103 broad.mit.edu 36 10 85981917 85981917 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015613 exon4 c.G1618T p.A540S . . . GRID1 2894 broad.mit.edu 36 10 87397093 87397093 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon13 c.G2039A p.G680D . . . GRID1 2894 broad.mit.edu 36 10 87472846 87472846 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon12 c.C1891T p.R631C . . . GRID1 2894 broad.mit.edu 36 10 87474260 87474260 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon11 c.T1687G p.F563V . . . GRID1 2894 broad.mit.edu 36 10 87605879 87605879 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon7 c.T1000A p.F334I . . . GRID1 2894 broad.mit.edu 36 10 87665968 87665968 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017551 exon5 c.G735T p.E245D . . . GRID1 2894 broad.mit.edu 36 10 87888559 87888559 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017551 exon4 c.C723T p.N241N . . . LDB3 11155 broad.mit.edu 36 10 88429216 88429216 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080115 exon2 c.T206G p.I69S . . . MMRN2 79812 broad.mit.edu 36 10 88693251 88693251 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024756 exon6 c.G1270A p.D424N . . . PAPSS2 9060 broad.mit.edu 36 10 89477059 89477059 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004670 exon8 c.G904A p.V302I . . . PTEN 5728 broad.mit.edu 36 10 89614247 89614247 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000314 exon1 c.G41T p.R14M PTEN,vulva,NS,Substitution - Missense,+1 . . PTEN 5728 broad.mit.edu 36 10 89682885 89682885 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000314 exon5 c.G389A p.R130Q PTEN,central_nervous_system,brain,Substitution - Nonsense,+1 . . LIPJ 142910 broad.mit.edu 36 10 90343870 90343870 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010939 exon5 c.C318A p.F106L . . . LIPF 8513 broad.mit.edu 36 10 90421605 90421605 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004190 exon6 c.G572T p.R191I . . . LIPN 643418 broad.mit.edu 36 10 90514278 90514278 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102469 exon3 c.C358T p.R120W . . . LIPN 643418 broad.mit.edu 36 10 90527866 90527866 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102469 exon9 c.C1084A p.L362I . . . IFIT3 3437 broad.mit.edu 36 10 91089749 91089749 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001549 exon2 c.A1357G p.I453V . . . IFIT1 3434 broad.mit.edu 36 10 91152329 91152329 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001548 exon2 c.A317G p.Y106C . . . SLC16A12 387700 broad.mit.edu 36 10 91185992 91185992 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213606 exon7 c.C1093A p.L365I . . . SLC16A12 387700 broad.mit.edu 36 10 91190985 91190985 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213606 exon5 c.C308A p.P103Q . . . PANK1 53354 broad.mit.edu 36 10 91338481 91338481 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_148978 exon6 c.C970A p.L324I . . . KIF20B 9585 broad.mit.edu 36 10 91487549 91487549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016195 exon20 c.G2851A p.E951K . . . HTR7 3363 broad.mit.edu 36 10 92493378 92493378 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019859 exon3 c.G1345A p.V449I . . . ANKRD1 27063 broad.mit.edu 36 10 92665913 92665913 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014391 exon6 c.G646T p.D216Y . . . ANKRD1 27063 broad.mit.edu 36 10 92670017 92670017 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014391 exon2 c.G96T p.E32D . . . HECTD2 143279 broad.mit.edu 36 10 93248654 93248654 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182765 exon17 c.C1801T p.P601S . . . PPP1R3C 5507 broad.mit.edu 36 10 93380257 93380257 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005398 exon2 c.G361A p.D121N . . . TNKS2 80351 broad.mit.edu 36 10 93562928 93562928 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025235 exon2 c.G408T p.K136N . . . TNKS2 80351 broad.mit.edu 36 10 93569245 93569245 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025235 exon5 c.C584T p.A195V . . . BTAF1 9044 broad.mit.edu 36 10 93692204 93692204 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003972 exon4 c.G299A p.R100Q . . . BTAF1 9044 broad.mit.edu 36 10 93709565 93709565 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003972 exon10 c.G1034T p.R345I . . . CPEB3 22849 broad.mit.edu 36 10 93841585 93841585 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178137 exon8 c.C1627A p.P543T . . . IDE 3416 broad.mit.edu 36 10 94257862 94257862 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004969 exon8 c.G1141A p.E381K . . . KIF11 3832 broad.mit.edu 36 10 94383465 94383465 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004523 exon14 c.T1808G p.I603S . . . EXOC6 54536 broad.mit.edu 36 10 94678153 94678153 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013848 exon9 c.G951A p.S317S . . . EXOC6 54536 broad.mit.edu 36 10 94723937 94723937 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013848 exon18 c.A1906G p.R636G . . . EXOC6 54536 broad.mit.edu 36 10 94808033 94808033 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013848 exon22 c.A2331G p.K777K . . . CYP26A1 1592 broad.mit.edu 36 10 94824700 94824700 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057157 exon3 c.G382A p.E128K . . . CYP26A1 1592 broad.mit.edu 36 10 94825622 94825622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057157 exon5 c.C707T p.T236M . . . MYOF 26509 broad.mit.edu 36 10 95079550 95079550 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133337 exon43 c.G4804T p.E1602X . . . MYOF 26509 broad.mit.edu 36 10 95231934 95231934 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133337 exon1 c.G8A p.R3Q . . . CEP55 55165 broad.mit.edu 36 10 95266918 95266918 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018131 exon6 c.A916C p.K306Q . . . PDE6C 5146 broad.mit.edu 36 10 95390681 95390681 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006204 exon14 c.G1752T p.K584N . . . LGI1 9211 broad.mit.edu 36 10 95547077 95547077 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005097 exon8 c.C1201A p.L401M . . . PLCE1 51196 broad.mit.edu 36 10 96063121 96063121 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016341 exon28 c.C6124A p.L2042M . . . NOC3L 64318 broad.mit.edu 36 10 96090069 96090069 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022451 exon16 c.G1734T p.L578F . . . NOC3L 64318 broad.mit.edu 36 10 96094675 96094675 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022451 exon12 c.G1395T p.K465N . . . NOC3L 64318 broad.mit.edu 36 10 96099096 96099096 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022451 exon10 c.G1158T p.K386N . . . HELLS 3070 broad.mit.edu 36 10 96344515 96344515 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018063 exon19 c.G2162A p.R721H . . . PDLIM1 9124 broad.mit.edu 36 10 96997053 96997053 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020992 exon5 c.G594T p.K198N . . . PDLIM1 9124 broad.mit.edu 36 10 97021486 97021486 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020992 exon2 c.G142T p.D48Y . . . SORBS1 10580 broad.mit.edu 36 10 97125747 97125747 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034955 exon17 c.C1776A p.F592L . . . SORBS1 10580 broad.mit.edu 36 10 97134018 97134018 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034957 exon9 c.C745A p.L249M . . . ALDH18A1 5832 broad.mit.edu 36 10 97356550 97356550 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017423 exon18 c.C2341A p.L781I . . . ZNF518A 9849 broad.mit.edu 36 10 97908300 97908300 + Missense_Mutation SNP C T T rs61731062 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014803 exon6 c.C2231T p.A744V . . . ZNF518A 9849 broad.mit.edu 36 10 97909066 97909066 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014803 exon6 c.A2997G p.P999P . . . DNTT 1791 broad.mit.edu 36 10 98078574 98078574 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004088 exon8 c.G1110T p.K370N . . . TM9SF3 56889 broad.mit.edu 36 10 98301084 98301084 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020123 exon7 c.G867T p.L289L . . . TM9SF3 56889 broad.mit.edu 36 10 98302716 98302716 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020123 exon6 c.G751T p.D251Y . . . TM9SF3 56889 broad.mit.edu 36 10 98326502 98326502 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020123 exon2 c.G177T p.K59N . . . PIK3AP1 118788 broad.mit.edu 36 10 98345375 98345375 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152309 exon17 c.G2367A p.P789P . . . PIK3AP1 118788 broad.mit.edu 36 10 98459543 98459543 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152309 exon2 c.C201T p.V67V . . . SLIT1 6585 broad.mit.edu 36 10 98793143 98793143 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003061 exon19 c.C1971T p.F657F . . . ARHGAP19 84986 broad.mit.edu 36 10 99009324 99009324 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032900 exon5 c.A665G p.D222G . . . PGAM1 5223 broad.mit.edu 36 10 99182225 99182225 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002629 exon4 c.G719A p.R240H . . . CRTAC1 55118 broad.mit.edu 36 10 99651359 99651359 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018058 exon8 c.C1024T p.P342S . . . PPRC1 23082 broad.mit.edu 36 10 103892854 103892854 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . INA 9118 broad.mit.edu 36 10 105038419 105038419 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IDI1 3422 broad.mit.edu 36 10 1080115 1080115 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SORCS1 114815 broad.mit.edu 36 10 108579314 108579314 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NRAP 4892 broad.mit.edu 36 10 115339547 115339547 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PNLIPRP2 5408 broad.mit.edu 36 10 118379572 118379572 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KCNK18 338567 broad.mit.edu 36 10 118950650 118950650 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UPF2 26019 broad.mit.edu 36 10 12117054 12117054 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BUB3 9184 broad.mit.edu 36 10 124904416 124904416 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM175B 23172 broad.mit.edu 36 10 126485490 126485490 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TCERG1L 256536 broad.mit.edu 36 10 132996645 132996645 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPR123 84435 broad.mit.edu 36 10 134748504 134748504 + 5'Flank SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DUX4L2 728410 broad.mit.edu 36 10 135341072 135341072 + Intron SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRPF18 8559 broad.mit.edu 36 10 13712350 13712350 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FRMD4A 55691 broad.mit.edu 36 10 13789131 13789131 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADARB2 105 broad.mit.edu 36 10 1411359 1411359 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRDMT1 1787 broad.mit.edu 36 10 17244162 17244162 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PLXDC2 84898 broad.mit.edu 36 10 20375796 20375796 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ARMC3 219681 broad.mit.edu 36 10 23260921 23260921 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANKRD26 22852 broad.mit.edu 36 10 27375280 27375280 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C10orf68 79741 broad.mit.edu 36 10 33177658 33177658 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM21B 55747 broad.mit.edu 36 10 47465951 47465951 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RBP3 5949 broad.mit.edu 36 10 48006044 48006044 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TUBAL3 79861 broad.mit.edu 36 10 5432798 5432798 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PCDH15 65217 broad.mit.edu 36 10 55253188 55253188 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FBXO18 84893 broad.mit.edu 36 10 6006272 6006272 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CTNNA3 29119 broad.mit.edu 36 10 68610080 68610080 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TET1 80312 broad.mit.edu 36 10 70121581 70121581 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DDX50 79009 broad.mit.edu 36 10 70364690 70364690 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SFMBT2 57713 broad.mit.edu 36 10 7282381 7282381 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SFMBT2 57713 broad.mit.edu 36 10 7302374 7302374 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TTC18 118491 broad.mit.edu 36 10 74721209 74721209 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TTC18 118491 broad.mit.edu 36 10 74726794 74726794 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . USP54 159195 broad.mit.edu 36 10 74959437 74959437 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYST4 23522 broad.mit.edu 36 10 76273249 76273249 + Intron SNP G A A rs35861648 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYST4 23522 broad.mit.edu 36 10 76458241 76458241 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ITIH2 3698 broad.mit.edu 36 10 7802938 7802938 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KCNMA1 3778 broad.mit.edu 36 10 78378895 78378895 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANXA11 311 broad.mit.edu 36 10 81922603 81922603 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CDHR1 92211 broad.mit.edu 36 10 85960911 85960911 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM190B 54462 broad.mit.edu 36 10 86263177 86263177 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LDB3 11155 broad.mit.edu 36 10 88468588 88468588 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM35A 54537 broad.mit.edu 36 10 88920214 88920214 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM35A 54537 broad.mit.edu 36 10 88929804 88929804 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM22D 728130 broad.mit.edu 36 10 89108171 89108171 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MINPP1 9562 broad.mit.edu 36 10 89258064 89258064 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LIPN 643418 broad.mit.edu 36 10 90515996 90515996 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HECTD2 143279 broad.mit.edu 36 10 93247835 93247835 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYOF 26509 broad.mit.edu 36 10 95201787 95201787 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CYP2C9 1559 broad.mit.edu 36 10 96688420 96688420 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HPS1 3257 broad.mit.edu 36 10 100169781 100169781 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target DYNC2H1 79659 broad.mit.edu 36 11 102697133 102697133 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001377 exon81 c.11891delT p.I3964fs . . . GRIA4 2893 broad.mit.edu 36 11 105294682 105294682 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon11 c.1304delA p.E435fs . . . RSF1 51773 broad.mit.edu 36 11 77153303 77153303 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016578 exon2 c.267delA p.K89fs . . . PGR 5241 broad.mit.edu 36 11 100427486 100427486 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000926 exon5 c.G2236T p.D746Y . . . TRPC6 7225 broad.mit.edu 36 11 100858962 100858962 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004621 exon5 c.G1438A p.A480T . . . YAP1 10413 broad.mit.edu 36 11 101581986 101581986 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006106 exon4 c.C841T p.R281W . . . BIRC3 330 broad.mit.edu 36 11 101701282 101701282 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182962 exon3 c.A832C p.S278R . . . MMP8 4317 broad.mit.edu 36 11 102094474 102094474 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002424 exon5 c.C665A p.S222Y . . . MMP8 4317 broad.mit.edu 36 11 102098515 102098515 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002424 exon2 c.C202T p.R68X . . . MMP10 4319 broad.mit.edu 36 11 102155533 102155533 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002425 exon2 c.C259T p.R87C . . . MMP13 4322 broad.mit.edu 36 11 102328078 102328078 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002427 exon5 c.C672T p.F224F . . . MMP13 4322 broad.mit.edu 36 11 102331390 102331390 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002427 exon2 c.A163C p.I55L . . . DYNC2H1 79659 broad.mit.edu 36 11 102510301 102510301 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon15 c.G2148T p.Q716H . . . DYNC2H1 79659 broad.mit.edu 36 11 102534733 102534733 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon27 c.A4245C p.L1415F . . . DYNC2H1 79659 broad.mit.edu 36 11 102546080 102546080 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon33 c.A5002C p.T1668P . . . DYNC2H1 79659 broad.mit.edu 36 11 102553702 102553702 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon38 c.G6082T p.E2028X . . . DYNC2H1 79659 broad.mit.edu 36 11 102562439 102562439 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001377 exon42 c.G6892T p.G2298W . . . DYNC2H1 79659 broad.mit.edu 36 11 102607272 102607272 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon60 c.G9427T p.E3143X . . . DYNC2H1 79659 broad.mit.edu 36 11 102610074 102610074 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon61 c.G9542T p.R3181I . . . DYNC2H1 79659 broad.mit.edu 36 11 102635890 102635890 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon70 c.G10669T p.E3557X . . . DYNC2H1 79659 broad.mit.edu 36 11 102663489 102663489 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001377 exon75 c.G11040A p.A3680A . . . DDI1 414301 broad.mit.edu 36 11 103412926 103412926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001711 exon1 c.G166A p.E56K . . . CARD17 440068 broad.mit.edu 36 11 104476669 104476669 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007232 exon2 c.G55A p.E19K . . . GRIA4 2893 broad.mit.edu 36 11 104988228 104988228 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon3 c.G104A p.R35Q . . . GRIA4 2893 broad.mit.edu 36 11 105274228 105274228 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon7 c.G750T p.E250D . . . GRIA4 2893 broad.mit.edu 36 11 105274318 105274318 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon7 c.G840A p.K280K . . . GRIA4 2893 broad.mit.edu 36 11 105300561 105300561 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon12 c.T1703G p.F568C . . . GRIA4 2893 broad.mit.edu 36 11 105350345 105350345 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077243 exon16 c.C2508A p.F836L . . . GUCY1A2 2977 broad.mit.edu 36 11 106063545 106063545 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000855 exon8 c.G2139A p.S713S . . . GUCY1A2 2977 broad.mit.edu 36 11 106084600 106084600 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000855 exon7 c.G1839T p.M613I . . . CWF19L2 143884 broad.mit.edu 36 11 106794181 106794181 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152434 exon9 c.G1476T p.E492D . . . CWF19L2 143884 broad.mit.edu 36 11 106805094 106805094 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152434 exon8 c.G1074T p.E358D . . . ELMOD1 55531 broad.mit.edu 36 11 107006455 107006455 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130037 exon3 c.C120A p.I40I . . . CTR9 9646 broad.mit.edu 36 11 10730886 10730886 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014633 exon2 c.C137A p.A46D . . . CUL5 8065 broad.mit.edu 36 11 107430690 107430690 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003478 exon6 c.G660A p.S220S . . . ATM 472 broad.mit.edu 36 11 107620810 107620810 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon7 c.C748T p.R250X . . . ATM 472 broad.mit.edu 36 11 107673310 107673310 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon33 c.G4996T p.E1666X . . . ATM 472 broad.mit.edu 36 11 107695961 107695961 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon44 c.T6418G p.F2140V . . . ATM 472 broad.mit.edu 36 11 107703663 107703663 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000051 exon48 c.C7057A p.P2353T . . . EIF4G2 1982 broad.mit.edu 36 11 10777848 10777848 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001418 exon19 c.G2151T p.E717D . . . EIF4G2 1982 broad.mit.edu 36 11 10784091 10784091 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001418 exon4 c.G187A p.A63T . . . ZC3H12C 85463 broad.mit.edu 36 11 109512608 109512608 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033390 exon2 c.T32G p.V11G . . . ARHGAP20 57569 broad.mit.edu 36 11 109958340 109958340 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020809 exon15 c.G1635T p.E545D . . . LAYN 143903 broad.mit.edu 36 11 110925592 110925592 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178834 exon3 c.C423A p.V141V . . . PPP2R1B 5519 broad.mit.edu 36 11 111123917 111123917 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181700 exon9 c.C1178T p.S393F . . . FDXACB1 91893 broad.mit.edu 36 11 111251444 111251444 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138378 exon5 c.G1287T p.E429D . . . C11orf57 55216 broad.mit.edu 36 11 111451555 111451555 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082969 exon2 c.G47A p.R16Q . . . SDHD 6392 broad.mit.edu 36 11 111470774 111470774 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003002 exon4 c.G350T p.G117V . . . PTS 5805 broad.mit.edu 36 11 111609368 111609368 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000317 exon6 c.G318A p.T106T . . . NCAM1 4684 broad.mit.edu 36 11 112611065 112611065 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000615 exon13 c.C1765T p.R589C . . . NCAM1 4684 broad.mit.edu 36 11 112631831 112631831 + 5'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000615 exon14 c.C1822T p.R608X . . . TTC12 54970 broad.mit.edu 36 11 112728132 112728132 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017868 exon16 c.G1439T p.S480I . . . USP28 57646 broad.mit.edu 36 11 113206849 113206849 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020886 exon9 c.C860T p.P287L . . . HTR3B 9177 broad.mit.edu 36 11 113307780 113307780 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006028 exon4 c.G349A p.D117N . . . HTR3A 3359 broad.mit.edu 36 11 113359053 113359053 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161772 exon5 c.G331A p.V111M . . . NNMT 4837 broad.mit.edu 36 11 113688310 113688310 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006169 exon3 c.C696T p.I232I . . . C11orf71 54494 broad.mit.edu 36 11 113776013 113776013 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019021 exon1 c.G251A p.S84N . . . FAM55A 120400 broad.mit.edu 36 11 113898948 113898948 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152315 exon5 c.A545C p.K182T . . . FAM55A 120400 broad.mit.edu 36 11 113906478 113906478 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152315 exon3 c.A36C p.G12G . . . CADM1 23705 broad.mit.edu 36 11 114605195 114605195 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014333 exon5 c.C569T p.S190L . . . BUD13 84811 broad.mit.edu 36 11 116138624 116138624 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032725 exon4 c.G891T p.K297N . . . SIK3 23387 broad.mit.edu 36 11 116252224 116252224 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025164 exon8 c.C876A p.L292L . . . RNF214 257160 broad.mit.edu 36 11 116655879 116655879 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077239 exon7 c.C1005T p.G335G . . . CEP164 22897 broad.mit.edu 36 11 116747319 116747319 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014956 exon9 c.G1079A p.R360K . . . CEP164 22897 broad.mit.edu 36 11 116771554 116771554 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014956 exon24 c.G2995T p.E999X . . . CEP164 22897 broad.mit.edu 36 11 116772004 116772004 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G G G G Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_014956 exon25 c.G3114T p.K1038N . . . DSCAML1 57453 broad.mit.edu 36 11 116834720 116834720 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020693 exon19 c.C3708T p.G1236G . . . DSCAML1 57453 broad.mit.edu 36 11 116908336 116908336 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020693 exon4 c.C803T p.T268I . . . SCN4B 6330 broad.mit.edu 36 11 117521136 117521136 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174934 exon2 c.T80C p.V27A . . . UBE4A 9354 broad.mit.edu 36 11 117768780 117768780 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004788 exon19 c.G3055T p.V1019F . . . MLL 4297 broad.mit.edu 36 11 117848685 117848685 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon3 c.C1601T p.S534L . . . MLL 4297 broad.mit.edu 36 11 117852753 117852753 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon4 c.G3180T p.E1060D . . . MLL 4297 broad.mit.edu 36 11 117874428 117874428 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon22 c.G5936A p.R1979Q . . . MLL 4297 broad.mit.edu 36 11 117878870 117878870 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon27 c.C7053T p.I2351I . . . MLL 4297 broad.mit.edu 36 11 117879815 117879815 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon27 c.A7998G p.G2666G . . . MLL 4297 broad.mit.edu 36 11 117882168 117882168 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon27 c.G10351A p.E3451K . . . MLL 4297 broad.mit.edu 36 11 117882553 117882553 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197104 exon27 c.C10736T p.S3579F . . . TREH 11181 broad.mit.edu 36 11 118037094 118037094 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007180 exon8 c.C842A p.P281H . . . CXCR5 643 broad.mit.edu 36 11 118269548 118269548 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001716 exon2 c.G85A p.D29N . . . VPS11 55823 broad.mit.edu 36 11 118449734 118449734 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021729 exon7 c.G1100T p.R367I . . . DPAGT1 1798 broad.mit.edu 36 11 118476710 118476710 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001382 exon3 c.C336T p.G112G . . . CBL 867 broad.mit.edu 36 11 118654501 118654501 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005188 exon9 c.G1299A p.P433P . . . CBL 867 broad.mit.edu 36 11 118661221 118661221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005188 exon11 c.G1676A p.R559Q . . . ARHGEF12 23365 broad.mit.edu 36 11 119822962 119822962 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198665 exon17 c.G1490A p.R497Q . . . ARHGEF12 23365 broad.mit.edu 36 11 119825039 119825039 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198665 exon20 c.G1692T p.K564N . . . ARHGEF12 23365 broad.mit.edu 36 11 119833153 119833153 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198665 exon22 c.G2116T p.E706X . . . ARHGEF12 23365 broad.mit.edu 36 11 119852621 119852621 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198665 exon33 c.G3262A p.A1088T . . . GRIK4 2900 broad.mit.edu 36 11 120336925 120336925 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014619 exon15 c.G1972T p.D658Y . . . TECTA 7007 broad.mit.edu 36 11 120501547 120501547 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005422 exon7 c.C1530T p.C510C . . . TECTA 7007 broad.mit.edu 36 11 120565004 120565004 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005422 exon21 c.C6168T p.C2056C . . . BLID 414899 broad.mit.edu 36 11 121491578 121491578 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001786 exon1 c.G263T p.R88I . . . MUC5B 727897 broad.mit.edu 36 11 1225530 1225530 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002458 exon31 c.T10844C p.L3615P . . . OR6T1 219874 broad.mit.edu 36 11 123319336 123319336 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005187 exon1 c.C420A p.V140V . . . OR10S1 219873 broad.mit.edu 36 11 123353029 123353029 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004474 exon1 c.G580A p.D194N . . . OR10G4 390264 broad.mit.edu 36 11 123392034 123392034 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004462 exon1 c.G543A p.P181P OR10G4,central_nervous_system,brain,Substitution - coding silent,0 . . VWA5A 4013 broad.mit.edu 36 11 123510886 123510886 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014622 exon11 c.G1294T p.G432C . . . OR8G2 26492 broad.mit.edu 36 11 123600919 123600919 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007249 exon1 c.C312A p.I104I . . . OR8B4 283162 broad.mit.edu 36 11 123799721 123799721 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005196 exon1 c.T257C p.V86A . . . OR8B8 26493 broad.mit.edu 36 11 123816108 123816108 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012378 exon1 c.C84T p.F28F . . . VSIG2 23584 broad.mit.edu 36 11 124123568 124123568 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014312 exon6 c.C779T p.A260V . . . C11orf61 79684 broad.mit.edu 36 11 124143093 124143093 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024631 exon4 c.C713T p.S238L . . . ROBO3 64221 broad.mit.edu 36 11 124250354 124250354 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022370 exon14 c.G2211A p.G737G . . . ROBO3 64221 broad.mit.edu 36 11 124251080 124251080 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022370 exon16 c.G2442T p.E814D . . . HEPACAM 220296 broad.mit.edu 36 11 124299107 124299107 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152722 exon3 c.C437T p.S146L . . . CCDC15 80071 broad.mit.edu 36 11 124380304 124380304 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025004 exon13 c.G2397T p.K799N . . . ACRV1 56 broad.mit.edu 36 11 125047726 125047726 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020115 exon3 c.G218A p.R73Q . . . PUS3 83480 broad.mit.edu 36 11 125269110 125269110 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031307 exon4 c.G1226A p.R409H . . . HYLS1 219844 broad.mit.edu 36 11 125274768 125274768 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145014 exon4 c.C295A p.L99M . . . HYLS1 219844 broad.mit.edu 36 11 125275062 125275062 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145014 exon4 c.C589T p.L197F . . . DDX25 29118 broad.mit.edu 36 11 125297974 125297974 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013264 exon12 c.G1440T p.K480N . . . CDON 50937 broad.mit.edu 36 11 125390544 125390544 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016952 exon7 c.G1000A p.D334N . . . FOXRED1 55572 broad.mit.edu 36 11 125646584 125646584 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017547 exon2 c.C128T p.S43L . . . ETS1 2113 broad.mit.edu 36 11 127837574 127837574 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005238 exon8 c.G1218A p.A406A . . . KCNJ1 3758 broad.mit.edu 36 11 128214435 128214435 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153767 exon4 c.G914A p.R305H . . . ARHGAP32 9743 broad.mit.edu 36 11 128441894 128441894 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142685 exon6 c.G569A p.R190Q . . . BARX2 8538 broad.mit.edu 36 11 128751242 128751242 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003658 exon1 c.G102T p.E34D . . . TEAD1 7003 broad.mit.edu 36 11 12880158 12880158 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021961 exon10 c.A795C p.K265N . . . PRDM10 56980 broad.mit.edu 36 11 129317707 129317707 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020228 exon7 c.G790T p.E264X . . . APLP2 334 broad.mit.edu 36 11 129485668 129485668 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142276 exon3 c.A305G p.N102S . . . APLP2 334 broad.mit.edu 36 11 129505195 129505195 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142276 exon11 c.A1508C p.D503A . . . SNX19 399979 broad.mit.edu 36 11 130278385 130278385 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014758 exon8 c.C2548A p.L850I . . . SNX19 399979 broad.mit.edu 36 11 130290819 130290819 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014758 exon1 c.C226T p.R76X . . . OPCML 4978 broad.mit.edu 36 11 131795344 131795344 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002545 exon7 c.C991A p.L331I . . . SPATA19 219938 broad.mit.edu 36 11 133217593 133217593 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174927 exon5 c.G434A p.R145Q . . . IGSF9B 22997 broad.mit.edu 36 11 133296477 133296477 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014987 exon18 c.G2353A p.E785K . . . ARNTL 406 broad.mit.edu 36 11 13347811 13347811 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030273 exon12 c.C612A p.F204L . . . ARNTL 406 broad.mit.edu 36 11 13347883 13347883 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030273 exon12 c.G684T p.K228N . . . JAM3 83700 broad.mit.edu 36 11 133519483 133519483 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032801 exon4 c.G529A p.E177K . . . GLB1L2 89944 broad.mit.edu 36 11 133748887 133748887 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138342 exon16 c.G1570A p.D524N . . . COPB1 1315 broad.mit.edu 36 11 14471891 14471891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016451 exon4 c.C364T p.R122C . . . PSMA1 5682 broad.mit.edu 36 11 14492571 14492571 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148976 exon6 c.C315T p.F105F . . . CYP2R1 120227 broad.mit.edu 36 11 14858546 14858546 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024514 exon3 c.C712A p.L238M . . . SOX6 55553 broad.mit.edu 36 11 15964393 15964393 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033326 exon15 c.C2056T p.R686W . . . KRTAP5-6 440023 broad.mit.edu 36 11 1675176 1675176 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012416 exon1 c.T125C p.V42A . . . NUCB2 4925 broad.mit.edu 36 11 17288972 17288972 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005013 exon7 c.G508T p.D170Y . . . ABCC8 6833 broad.mit.edu 36 11 17382742 17382742 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000352 exon28 c.C3450A p.V1150V . . . USH1C 10083 broad.mit.edu 36 11 17494379 17494379 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153676 exon15 c.C1245T p.F415F . . . TPH1 7166 broad.mit.edu 36 11 18018876 18018876 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004179 exon1 c.G10T p.D4Y . . . SAAL1 113174 broad.mit.edu 36 11 18061687 18061687 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138421 exon10 c.C1210A p.L404I . . . SAAL1 113174 broad.mit.edu 36 11 18067597 18067597 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138421 exon7 c.A626C p.K209T . . . SAA4 6291 broad.mit.edu 36 11 18209712 18209712 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006512 exon4 c.G306A p.S102S . . . SAA1 6288 broad.mit.edu 36 11 18247867 18247867 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000331 exon4 c.C258A p.F86L . . . HPS5 11234 broad.mit.edu 36 11 18260299 18260299 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181507 exon22 c.C3103A p.L1035I . . . SPTY2D1 144108 broad.mit.edu 36 11 18588016 18588016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194285 exon6 c.C2026T p.R676C . . . IGSF22 283284 broad.mit.edu 36 11 18693783 18693783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173588 exon11 c.C1303T p.R435C . . . E2F8 79733 broad.mit.edu 36 11 19212874 19212874 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024680 exon5 c.T759G p.F253L . . . NAV2 89797 broad.mit.edu 36 11 20061210 20061210 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001111018 exon26 c.A5215G p.T1739A . . . HTATIP2 10553 broad.mit.edu 36 11 20361254 20361254 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098522 exon5 c.A656G p.D219G . . . SLC6A5 9152 broad.mit.edu 36 11 20595889 20595889 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004211 exon7 c.G1143T p.K381N . . . NELL1 4745 broad.mit.edu 36 11 20905444 20905444 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006157 exon8 c.G774T p.E258D . . . ANO5 203859 broad.mit.edu 36 11 22181960 22181960 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142649 exon2 c.C75A p.F25L . . . ANO5 203859 broad.mit.edu 36 11 22228872 22228872 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142649 exon11 c.C1020A p.I340I . . . ANO5 203859 broad.mit.edu 36 11 22235804 22235804 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142649 exon14 c.G1332T p.E444D . . . ANO5 203859 broad.mit.edu 36 11 22251076 22251076 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142649 exon19 c.C2197A p.L733I . . . ANO5 203859 broad.mit.edu 36 11 22257736 22257736 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142649 exon22 c.G2588T p.R863I . . . GAS2 2620 broad.mit.edu 36 11 22734060 22734060 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005256 exon6 c.G708T p.K236N . . . LUZP2 338645 broad.mit.edu 36 11 24707330 24707330 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009909 exon2 c.C102A p.V34V . . . ANO3 63982 broad.mit.edu 36 11 26620030 26620030 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031418 exon22 c.A2153G p.N718S . . . SLC5A12 159963 broad.mit.edu 36 11 26699826 26699826 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178498 exon1 c.G12A p.K4K . . . BBOX1 8424 broad.mit.edu 36 11 27071482 27071482 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003986 exon5 c.T526G p.F176V . . . NLRP6 171389 broad.mit.edu 36 11 271136 271136 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138329 exon4 c.C1402A p.L468M . . . KIF18A 81930 broad.mit.edu 36 11 28062812 28062812 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031217 exon7 c.C1017T p.Y339Y . . . KIF18A 81930 broad.mit.edu 36 11 28076022 28076022 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031217 exon2 c.C49T p.R17C . . . CARS 833 broad.mit.edu 36 11 2979846 2979846 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014437 exon22 c.C2291T p.A764V . . . KCNA4 3739 broad.mit.edu 36 11 29990667 29990667 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002233 exon2 c.A135T p.A45A . . . MPPED2 744 broad.mit.edu 36 11 30389682 30389682 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001584 exon6 c.C794A p.T265K . . . Unknown 0 broad.mit.edu 36 11 30899010 30899010 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020869 exon6 c.C776A p.A259D . . . RCN1 5954 broad.mit.edu 36 11 32075285 32075285 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002901 exon2 c.G274A p.D92N . . . CCDC73 493860 broad.mit.edu 36 11 32613874 32613874 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008391 exon14 c.G1129T p.E377X . . . DEPDC7 91614 broad.mit.edu 36 11 33009603 33009603 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139160 exon5 c.G859T p.D287Y . . . CSTF3 1479 broad.mit.edu 36 11 33080330 33080330 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001326 exon10 c.T795C p.R265R . . . HIPK3 10114 broad.mit.edu 36 11 33326016 33326016 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005734 exon11 c.G2187A p.P729P . . . PDHX 8050 broad.mit.edu 36 11 34938566 34938566 + Missense_Mutation SNP G A A rs61752925 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003477 exon5 c.G566A p.R189H . . . PDHX 8050 broad.mit.edu 36 11 34973068 34973068 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166158 exon6 c.G598A p.E200K . . . ART1 417 broad.mit.edu 36 11 3637433 3637433 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004314 exon3 c.G108T p.E36D . . . TRAF6 7189 broad.mit.edu 36 11 36468530 36468530 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145803 exon8 c.C1003T p.R335X . . . TRAF6 7189 broad.mit.edu 36 11 36476664 36476664 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145803 exon4 c.A399G p.K133K . . . RAG1 5896 broad.mit.edu 36 11 36554207 36554207 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000448 exon2 c.A2777C p.K926T . . . NUP98 4928 broad.mit.edu 36 11 3701118 3701118 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139131 exon16 c.G1991A p.S664N . . . LRRC4C 57689 broad.mit.edu 36 11 40093546 40093546 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020929 exon2 c.T873C p.H291H . . . LRRC4C 57689 broad.mit.edu 36 11 40093901 40093901 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020929 exon2 c.C518A p.S173Y . . . LRRC4C 57689 broad.mit.edu 36 11 40094266 40094266 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020929 exon2 c.C153A p.C51X . . . TRIM21 6737 broad.mit.edu 36 11 4368041 4368041 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003141 exon2 c.C175A p.L59M . . . ACCSL 390110 broad.mit.edu 36 11 44036567 44036567 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031854 exon12 c.C1452T p.V484V . . . ACCSL 390110 broad.mit.edu 36 11 44036804 44036804 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031854 exon13 c.G1603T p.E535X . . . ACCS 84680 broad.mit.edu 36 11 44055437 44055437 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032592 exon7 c.G589A p.A197T . . . SYT13 57586 broad.mit.edu 36 11 45224636 45224636 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020826 exon5 c.C850T p.P284S . . . OR52M1 119772 broad.mit.edu 36 11 4523755 4523755 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004137 exon1 c.C759A p.I253I . . . GYLTL1B 120071 broad.mit.edu 36 11 45905658 45905658 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152312 exon11 c.G1542A p.T514T . . . PHF21A 51317 broad.mit.edu 36 11 45931663 45931663 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016621 exon10 c.G1086A p.E362E . . . CREB3L1 90993 broad.mit.edu 36 11 46278133 46278133 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052854 exon2 c.C174A p.F58L . . . HARBI1 283254 broad.mit.edu 36 11 46594262 46594262 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173811 exon2 c.C102A p.Y34X . . . ZNF408 79797 broad.mit.edu 36 11 46679688 46679688 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024741 exon2 c.C216T p.R72R . . . CKAP5 9793 broad.mit.edu 36 11 46756325 46756325 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008938 exon22 c.G2688A p.P896P . . . LRP4 4038 broad.mit.edu 36 11 46851231 46851231 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002334 exon30 c.C4579T p.R1527C . . . LRP4 4038 broad.mit.edu 36 11 46855425 46855425 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002334 exon23 c.C3178T p.R1060C . . . MADD 8567 broad.mit.edu 36 11 47254056 47254056 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130476 exon4 c.G690A p.S230S . . . MADD 8567 broad.mit.edu 36 11 47254935 47254935 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130476 exon5 c.A1040C p.E347A . . . MADD 8567 broad.mit.edu 36 11 47262505 47262505 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130476 exon12 c.T1970C p.V657A . . . MADD 8567 broad.mit.edu 36 11 47274046 47274046 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130476 exon22 c.C3506T p.T1169I . . . RAPSN 5913 broad.mit.edu 36 11 47426121 47426121 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032645 exon2 c.C350T p.A117V . . . MTCH2 23788 broad.mit.edu 36 11 47607131 47607131 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014342 exon9 c.C583A p.L195M . . . MTCH2 23788 broad.mit.edu 36 11 47608685 47608685 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014342 exon8 c.C537T p.F179F . . . AGBL2 79841 broad.mit.edu 36 11 47688511 47688511 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024783 exon3 c.C226T p.L76F . . . FNBP4 23360 broad.mit.edu 36 11 47702801 47702801 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015308 exon13 c.C2114T p.P705L . . . FNBP4 23360 broad.mit.edu 36 11 47712216 47712216 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015308 exon10 c.C1623T p.F541F . . . OR52R1 119695 broad.mit.edu 36 11 4781443 4781443 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005177 exon1 c.C744A p.I248I . . . OR4B1 119765 broad.mit.edu 36 11 48195141 48195141 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005470 exon1 c.G204A p.E68E . . . OR4X2 119764 broad.mit.edu 36 11 48223662 48223662 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004727 exon1 c.G431A p.G144D . . . OR4C3 256144 broad.mit.edu 36 11 48303333 48303333 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004702 exon1 c.G265A p.A89T . . . OR4A47 403253 broad.mit.edu 36 11 48467356 48467356 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005512 exon1 c.T436C p.S146P . . . OR51A7 119687 broad.mit.edu 36 11 4885371 4885371 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004749 exon1 c.T196A p.L66M . . . OR51A7 119687 broad.mit.edu 36 11 4885901 4885901 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004749 exon1 c.C726A p.S242S . . . OR51G1 79324 broad.mit.edu 36 11 4901840 4901840 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005237 exon1 c.G306T p.Q102H . . . FOLH1 2346 broad.mit.edu 36 11 49178410 49178410 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193472 exon4 c.C339A p.I113I . . . OR51A2 401667 broad.mit.edu 36 11 4932694 4932694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004748 exon1 c.C826A p.L276I . . . OR51L1 119682 broad.mit.edu 36 11 4976977 4976977 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004755 exon1 c.C189A p.Y63X . . . OR4C13 283092 broad.mit.edu 36 11 49930556 49930556 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001955 exon1 c.G6A p.A2A . . . OR4C13 283092 broad.mit.edu 36 11 49930728 49930728 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001955 exon1 c.T178G p.F60V . . . OR4C12 283093 broad.mit.edu 36 11 49960352 49960352 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005270 exon1 c.A262T p.K88X . . . OR4C12 283093 broad.mit.edu 36 11 49960508 49960508 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005270 exon1 c.A106G p.T36A . . . OR52A5 390054 broad.mit.edu 36 11 5109931 5109931 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005160 exon1 c.G518A p.R173Q . . . OR4A5 81318 broad.mit.edu 36 11 51268086 51268086 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005272 exon1 c.G886T p.E296X . . . OR4A5 81318 broad.mit.edu 36 11 51268854 51268854 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005272 exon1 c.A118G p.N40D . . . OR52A1 23538 broad.mit.edu 36 11 5130037 5130037 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012375 exon1 c.C139A p.L47I . . . OR4C46 119749 broad.mit.edu 36 11 51371873 51371873 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004703 exon1 c.A16C p.N6H . . . OR51V1 283111 broad.mit.edu 36 11 5178051 5178051 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004760 exon1 c.A456C p.K152N . . . OR51V1 283111 broad.mit.edu 36 11 5178195 5178195 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004760 exon1 c.T312G p.D104E . . . OR51V1 283111 broad.mit.edu 36 11 5178490 5178490 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004760 exon1 c.G17T p.R6I . . . HBB 3043 broad.mit.edu 36 11 5204572 5204572 + Missense_Mutation SNP G T T rs35755331 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000518 exon2 c.C126A p.F42L . . . OR51B6 390058 broad.mit.edu 36 11 5330174 5330174 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004750 exon1 c.A861C p.P287P . . . OR51Q1 390061 broad.mit.edu 36 11 5400265 5400265 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004757 exon1 c.C259A p.L87I . . . OR51I1 390063 broad.mit.edu 36 11 5418421 5418421 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005288 exon1 c.G900T p.E300D . . . OR51I1 390063 broad.mit.edu 36 11 5418668 5418668 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005288 exon1 c.T653C p.L218P . . . OR52D1 390066 broad.mit.edu 36 11 5467123 5467123 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005163 exon1 c.C611A p.T204N . . . UBQLN3 50613 broad.mit.edu 36 11 5486017 5486017 + Missense_Mutation SNP C A A rs2234453 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017481 exon2 c.G1348T p.D450Y . . . OR4A16 81327 broad.mit.edu 36 11 54868095 54868095 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005274 exon1 c.T843C p.N281N . . . OR4A15 81328 broad.mit.edu 36 11 54892259 54892259 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005275 exon1 c.A324C p.K108N . . . OR4C16 219428 broad.mit.edu 36 11 55096829 55096829 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004701 exon1 c.T650C p.V217A . . . OR4S2 219431 broad.mit.edu 36 11 55175225 55175225 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004059 exon1 c.C270A p.I90I . . . OR52H1 390067 broad.mit.edu 36 11 5522854 5522854 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005289 exon1 c.G476A p.R159Q . . . OR5D16 390144 broad.mit.edu 36 11 55363523 55363523 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005496 exon1 c.C720A p.F240L . . . OR5W2 390148 broad.mit.edu 36 11 55438116 55438116 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001960 exon1 c.G519T p.E173D . . . OR5I1 10798 broad.mit.edu 36 11 55459541 55459541 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006637 exon1 c.G912A p.E304E . . . OR10AG1 282770 broad.mit.edu 36 11 55491783 55491783 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005491 exon1 c.G733A p.A245T . . . OR5AS1 219447 broad.mit.edu 36 11 55554562 55554562 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001921 exon1 c.T92C p.F31S . . . OR8H3 390152 broad.mit.edu 36 11 55646630 55646630 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005201 exon1 c.T206G p.F69C . . . OR5J2 282775 broad.mit.edu 36 11 55701557 55701557 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005492 exon1 c.C888T p.D296D . . . TRIM6-TRIM34 445372 broad.mit.edu 36 11 5583338 5583338 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198645 exon2 c.C190T p.R64C . . . OR8K3 219473 broad.mit.edu 36 11 55842693 55842693 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005202 exon1 c.T335G p.L112R . . . OR8K1 390157 broad.mit.edu 36 11 55870472 55870472 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002907 exon1 c.C382T p.R128C . . . OR8J1 219477 broad.mit.edu 36 11 55884846 55884846 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005205 exon1 c.C548T p.P183L . . . TRIM6 117854 broad.mit.edu 36 11 5588821 5588821 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198645 exon6 c.C615A p.F205L . . . TRIM6-TRIM34 445372 broad.mit.edu 36 11 5610122 5610122 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003819 exon8 c.C1047T p.S349S . . . TRIM6-TRIM34 445372 broad.mit.edu 36 11 5610458 5610458 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003827 exon2 c.C321A p.F107L . . . OR9G4 283189 broad.mit.edu 36 11 56267365 56267365 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005284 exon1 c.G499T p.G167X . . . OR5AK2 390181 broad.mit.edu 36 11 56513377 56513377 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005323 exon1 c.G413A p.R138Q . . . OR5AK2 390181 broad.mit.edu 36 11 56513689 56513689 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005323 exon1 c.C725A p.A242D . . . TRIM5 85363 broad.mit.edu 36 11 5656211 5656211 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033092 exon4 c.C543A p.V181V . . . TNKS1BP1 85456 broad.mit.edu 36 11 56834203 56834203 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033396 exon6 c.G2558A p.G853D . . . TNKS1BP1 85456 broad.mit.edu 36 11 56844550 56844550 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033396 exon3 c.C307T p.P103S . . . SSRP1 6749 broad.mit.edu 36 11 56855819 56855819 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003146 exon9 c.C1122A p.I374I . . . TRIM22 10346 broad.mit.edu 36 11 5686970 5686970 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199573 exon8 c.A1001C p.D334A . . . TRIM22 10346 broad.mit.edu 36 11 5687196 5687196 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199573 exon8 c.G1227T p.Q409H . . . PRG3 10394 broad.mit.edu 36 11 56903547 56903547 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006093 exon3 c.C371T p.A124V . . . PRG2 5553 broad.mit.edu 36 11 56913296 56913296 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002728 exon3 c.G129T p.E43D . . . PRG2 5553 broad.mit.edu 36 11 56948061 56948061 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017611 exon5 c.G331A p.A111T . . . SLC43A3 29015 broad.mit.edu 36 11 56950086 56950086 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017611 exon3 c.C136T p.L46L . . . OR56B1 387748 broad.mit.edu 36 11 5714801 5714801 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005180 exon1 c.G479T p.R160I . . . TMX2 51075 broad.mit.edu 36 11 57262756 57262756 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144012 exon4 c.C372A p.F124L . . . OR52N4 390072 broad.mit.edu 36 11 5732661 5732661 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005175 exon1 c.G115A p.V39M . . . CTNND1 1500 broad.mit.edu 36 11 57332579 57332579 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085469 exon10 c.G1912T p.E638X . . . CTNND1 1500 broad.mit.edu 36 11 57333350 57333350 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085469 exon11 c.G1950T p.K650N . . . OR52N4 390072 broad.mit.edu 36 11 5733389 5733389 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005175 exon1 c.T843C p.N281N . . . CTNND1 1500 broad.mit.edu 36 11 57339513 57339513 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001085469 exon15 c.G2452A p.D818N . . . OR6Q1 219952 broad.mit.edu 36 11 57555281 57555281 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005186 exon1 c.A281C p.K94T . . . OR52N5 390075 broad.mit.edu 36 11 5755739 5755739 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001922 exon1 c.G702A p.A234A . . . OR52N5 390075 broad.mit.edu 36 11 5756023 5756023 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001922 exon1 c.C418T p.R140C . . . OR52N1 79473 broad.mit.edu 36 11 5765983 5765983 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001913 exon1 c.C640A p.L214M . . . OR9Q2 219957 broad.mit.edu 36 11 57714870 57714870 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005283 exon1 c.A332G p.D111G . . . OR1S2 219958 broad.mit.edu 36 11 57727262 57727262 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004459 exon1 c.C968A p.S323Y . . . OR5B17 219965 broad.mit.edu 36 11 57882631 57882631 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005489 exon1 c.G488A p.R163H . . . OR5B3 441608 broad.mit.edu 36 11 57927334 57927334 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005469 exon1 c.G125A p.G42E . . . OR5B2 390190 broad.mit.edu 36 11 57947123 57947123 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005566 exon1 c.A188G p.N63S . . . CNTF 1270 broad.mit.edu 36 11 58148505 58148505 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000614 exon2 c.T537G p.I179M . . . OR52E6 390078 broad.mit.edu 36 11 5819348 5819348 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005167 exon1 c.C356T p.A119V . . . OR52E6 390078 broad.mit.edu 36 11 5819701 5819701 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005167 exon1 c.G3T p.M1I . . . GLYATL1 92292 broad.mit.edu 36 11 58478914 58478914 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080661 exon5 c.C375A p.I125I . . . GLYATL1 92292 broad.mit.edu 36 11 58480058 58480058 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080661 exon7 c.G984T p.Q328H . . . MPEG1 219972 broad.mit.edu 36 11 58736011 58736011 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001039396 exon1 c.G904A p.A302T . . . MPEG1 219972 broad.mit.edu 36 11 58736469 58736469 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039396 exon1 c.G446A p.R149Q . . . MS4A7 58475 broad.mit.edu 36 11 59916810 59916810 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206939 exon6 c.A623C p.K208T . . . MS4A14 84689 broad.mit.edu 36 11 59940027 59940027 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032597 exon5 c.C1010A p.S337Y . . . MS4A14 84689 broad.mit.edu 36 11 59940456 59940456 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032597 exon5 c.G1439T p.R480I . . . MS4A5 64232 broad.mit.edu 36 11 59953761 59953761 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023945 exon1 c.T38G p.V13G . . . MS4A5 64232 broad.mit.edu 36 11 59954958 59954958 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023945 exon2 c.C267A p.F89L . . . MS4A5 64232 broad.mit.edu 36 11 59957827 59957827 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023945 exon4 c.G353A p.R118Q . . . MS4A1 931 broad.mit.edu 36 11 59991059 59991059 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021950 exon6 c.G625A p.A209T . . . MS4A12 54860 broad.mit.edu 36 11 60031133 60031133 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164470 exon6 c.C626A p.P209H . . . MS4A10 341116 broad.mit.edu 36 11 60315041 60315041 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206893 exon3 c.G202A p.A68T . . . MS4A10 341116 broad.mit.edu 36 11 60316331 60316331 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206893 exon4 c.C321A p.I107I . . . ZP1 22917 broad.mit.edu 36 11 60395143 60395143 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207341 exon5 c.G964T p.A322S . . . CYBASC3 220002 broad.mit.edu 36 11 60877076 60877076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161454 exon6 c.G556A p.A186T . . . C11orf10 746 broad.mit.edu 36 11 61314543 61314543 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014206 exon2 c.C111T p.F37F . . . FEN1 2237 broad.mit.edu 36 11 61319469 61319469 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004111 exon2 c.G60T p.E20D . . . C11orf42 160298 broad.mit.edu 36 11 6188833 6188833 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173525 exon3 c.C987T p.F329F . . . FAM160A2 84067 broad.mit.edu 36 11 6195620 6195620 + Missense_Mutation SNP C T T rs35946899 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098794 exon9 c.G1772A p.R591Q . . . FAM160A2 84067 broad.mit.edu 36 11 6201623 6201623 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098794 exon3 c.G570A p.E190E . . . AHNAK 79026 broad.mit.edu 36 11 62043570 62043570 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.C14895T p.I4965I . . . AHNAK 79026 broad.mit.edu 36 11 62046140 62046140 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.G12325T p.E4109X . . . AHNAK 79026 broad.mit.edu 36 11 62047476 62047476 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.G10989A p.E3663E . . . AHNAK 79026 broad.mit.edu 36 11 62047898 62047898 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.G10567A p.E3523K . . . AHNAK 79026 broad.mit.edu 36 11 62051762 62051762 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.C6703A p.H2235N . . . AHNAK 79026 broad.mit.edu 36 11 62053836 62053836 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001620 exon5 c.A4629T p.G1543G . . . ROM1 6094 broad.mit.edu 36 11 62137825 62137825 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000327 exon1 c.T496C p.Y166H . . . CNGA4 1262 broad.mit.edu 36 11 6218053 6218053 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037329 exon4 c.C453T p.F151F . . . CNGA4 1262 broad.mit.edu 36 11 6218327 6218327 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037329 exon4 c.G727A p.E243K . . . CNGA4 1262 broad.mit.edu 36 11 6222066 6222066 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037329 exon6 c.T1579C p.Y527H . . . GNG3 2785 broad.mit.edu 36 11 62232836 62232836 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012202 exon3 c.C210A p.F70L . . . HNRNPUL2 221092 broad.mit.edu 36 11 62246884 62246884 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079559 exon5 c.T959C p.V320A . . . SLC22A10 387775 broad.mit.edu 36 11 62814460 62814460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039752 exon1 c.C247A p.L83M . . . SMPD1 6609 broad.mit.edu 36 11 6372171 6372171 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007593 exon6 c.C1651T p.P551S . . . RASGRP2 10235 broad.mit.edu 36 11 64265025 64265025 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098670 exon5 c.G342A p.R114R . . . TRIM3 10612 broad.mit.edu 36 11 6426970 6426970 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006458 exon13 c.G2099A p.G700D . . . NAALADL1 10004 broad.mit.edu 36 11 64581447 64581447 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005468 exon4 c.G575A p.R192Q . . . SNX32 254122 broad.mit.edu 36 11 65375198 65375198 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152760 exon7 c.G700A p.A234T . . . DNHD1 144132 broad.mit.edu 36 11 6545247 6545247 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144666 exon36 c.C11932T p.R3978X . . . TSGA10IP 254187 broad.mit.edu 36 11 65469848 65469848 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152762 exon1 c.G126A p.S42S . . . TSGA10IP 254187 broad.mit.edu 36 11 65471694 65471694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152762 exon3 c.G822T p.K274N . . . SF3B2 10992 broad.mit.edu 36 11 65583289 65583289 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006842 exon11 c.G1224T p.E408D . . . KLC2 64837 broad.mit.edu 36 11 65787996 65787996 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134775 exon7 c.G939T p.E313D . . . ILK 3611 broad.mit.edu 36 11 6587538 6587538 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004517 exon10 c.C864T p.V288V . . . DCHS1 8642 broad.mit.edu 36 11 6601468 6601468 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003737 exon21 c.G8015A p.R2672Q . . . CCDC87 55231 broad.mit.edu 36 11 66116163 66116163 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018219 exon1 c.G900A p.S300S . . . CCS 9973 broad.mit.edu 36 11 66129539 66129539 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005125 exon7 c.T571C p.W191R . . . RBM4B 83759 broad.mit.edu 36 11 66193047 66193047 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031492 exon3 c.C704T p.A235V . . . SPTBN2 6712 broad.mit.edu 36 11 66234778 66234778 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006946 exon9 c.G924T p.E308D . . . CHKA 1119 broad.mit.edu 36 11 67594316 67594316 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212469 exon5 c.G731T p.R244I . . . SUV420H1 51111 broad.mit.edu 36 11 67682928 67682928 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017635 exon11 c.T1461G p.N487K . . . SUV420H1 51111 broad.mit.edu 36 11 67695126 67695126 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017635 exon9 c.T909G p.I303M . . . MRGPRD 116512 broad.mit.edu 36 11 68504119 68504119 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198923 exon1 c.G913A p.E305K . . . TPCN2 219931 broad.mit.edu 36 11 68587017 68587017 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139075 exon6 c.G636A p.S212S . . . OR2D3 120775 broad.mit.edu 36 11 6899383 6899383 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004684 exon1 c.A575C p.H192P . . . ANO1 55107 broad.mit.edu 36 11 69703804 69703804 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018043 exon23 c.C2397A p.I799I . . . ZNF214 7761 broad.mit.edu 36 11 6980550 6980550 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013249 exon2 c.C93A p.V31V . . . PPFIA1 8500 broad.mit.edu 36 11 69850021 69850021 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003626 exon6 c.G612T p.M204I . . . NLRP14 338323 broad.mit.edu 36 11 7024634 7024634 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176822 exon5 c.G2118A p.K706K . . . DHCR7 1717 broad.mit.edu 36 11 70826563 70826563 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163817 exon8 c.C906T p.F302F . . . KRTAP5-11 440051 broad.mit.edu 36 11 70971067 70971067 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005405 exon1 c.G465T p.K155N . . . LRTOMT 220074 broad.mit.edu 36 11 71483779 71483779 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145309 exon5 c.G23T p.R8I . . . FCHSD2 9873 broad.mit.edu 36 11 72310588 72310588 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014824 exon9 c.G761A p.R254Q . . . FCHSD2 9873 broad.mit.edu 36 11 72377669 72377669 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014824 exon6 c.A509G p.D170G . . . SYT9 143425 broad.mit.edu 36 11 7280850 7280850 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175733 exon2 c.C150T p.I50I . . . C2CD3 26005 broad.mit.edu 36 11 73467055 73467055 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015531 exon23 c.G4356T p.K1452N . . . C2CD3 26005 broad.mit.edu 36 11 73528365 73528365 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015531 exon4 c.G640A p.D214N . . . P4HA3 283208 broad.mit.edu 36 11 73665679 73665679 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182904 exon9 c.C1334T p.T445M . . . SYT9 143425 broad.mit.edu 36 11 7395870 7395870 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175733 exon5 c.C1272A p.V424V . . . RNF169 254225 broad.mit.edu 36 11 74224865 74224865 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098638 exon6 c.G1569T p.E523D . . . OR2AT4 341152 broad.mit.edu 36 11 74477953 74477953 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005285 exon1 c.A454C p.S152R . . . SLCO2B1 11309 broad.mit.edu 36 11 74593236 74593236 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145212 exon11 c.C1661T p.S554L . . . OLFML1 283298 broad.mit.edu 36 11 7487935 7487935 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198474 exon3 c.G1149A p.W383X . . . TALDO1 6888 broad.mit.edu 36 11 754308 754308 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006755 exon7 c.A856C p.K286Q . . . LRRC32 2615 broad.mit.edu 36 11 76048934 76048934 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128922 exon3 c.G1351T p.V451L . . . CAPN5 726 broad.mit.edu 36 11 76503021 76503021 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004055 exon5 c.G592A p.D198N . . . MYO7A 4647 broad.mit.edu 36 11 76602643 76602643 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000260 exon48 c.G6529A p.G2177R . . . GDPD4 220032 broad.mit.edu 36 11 76657715 76657715 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182833 exon8 c.C526A p.L176I . . . PAK1 5058 broad.mit.edu 36 11 76781119 76781119 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002576 exon2 c.G95A p.G32E . . . RSF1 51773 broad.mit.edu 36 11 77063843 77063843 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016578 exon14 c.C3448T p.R1150X . . . ALG8 79053 broad.mit.edu 36 11 77489704 77489704 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024079 exon13 c.T1535G p.V512G . . . OR5P3 120066 broad.mit.edu 36 11 7803895 7803895 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153445 exon1 c.C201A p.A67A . . . ODZ4 26011 broad.mit.edu 36 11 78059197 78059197 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098816 exon32 c.C5841T p.F1947F . . . OR10A6 390093 broad.mit.edu 36 11 7906505 7906505 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004461 exon1 c.T281G p.F94C . . . RIC3 79608 broad.mit.edu 36 11 8089140 8089140 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024557 exon6 c.G788T p.R263I . . . PRCP 5547 broad.mit.edu 36 11 82227255 82227255 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005040 exon8 c.G1096T p.E366X . . . PCF11 51585 broad.mit.edu 36 11 82552977 82552977 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015885 exon4 c.G588T p.K196N . . . PCF11 51585 broad.mit.edu 36 11 82558369 82558369 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015885 exon8 c.G3344T p.R1115I . . . PCF11 51585 broad.mit.edu 36 11 82565825 82565825 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015885 exon10 c.A3808C p.N1270H . . . ANKRD42 338699 broad.mit.edu 36 11 82616521 82616521 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182603 exon7 c.T788G p.I263S . . . CCDC90B 60492 broad.mit.edu 36 11 82667463 82667463 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021825 exon3 c.T278C p.V93A . . . STK33 65975 broad.mit.edu 36 11 8435566 8435566 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030906 exon7 c.G595T p.E199X . . . CREBZF 58487 broad.mit.edu 36 11 85053484 85053484 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039618 exon1 c.T84G p.T28T . . . EED 8726 broad.mit.edu 36 11 85666654 85666654 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152991 exon11 c.T1172C p.L391S . . . C11orf73 51501 broad.mit.edu 36 11 85733304 85733304 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016401 exon4 c.G432T p.K144N . . . CCDC81 60494 broad.mit.edu 36 11 85789386 85789386 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001156474 exon7 c.G776T p.R259I . . . PRSS23 11098 broad.mit.edu 36 11 86196511 86196511 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007173 exon2 c.G178T p.E60X . . . ST5 6764 broad.mit.edu 36 11 8695915 8695915 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005418 exon8 c.G1578A p.L526L . . . GRM5 2915 broad.mit.edu 36 11 87940698 87940698 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000842 exon8 c.T1801C p.F601L . . . GRM5 2915 broad.mit.edu 36 11 88222907 88222907 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000842 exon3 c.C726T p.I242I . . . FOLH1B 219595 broad.mit.edu 36 11 89071269 89071269 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153696 exon14 c.G1183A p.E395K . . . NAALAD2 10003 broad.mit.edu 36 11 89508416 89508416 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005467 exon2 c.C124T p.R42C . . . FAT3 120114 broad.mit.edu 36 11 91726736 91726736 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001008781 exon1 c.G1810A p.D604N . . . FAT3 120114 broad.mit.edu 36 11 91727771 91727771 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon1 c.C2845T p.L949F . . . FAT3 120114 broad.mit.edu 36 11 92171124 92171124 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon9 c.C5297T p.A1766V . . . FAT3 120114 broad.mit.edu 36 11 92216779 92216779 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008781 exon18 c.C10598T p.S3533F . . . HEPHL1 341208 broad.mit.edu 36 11 93394227 93394227 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098672 exon1 c.C45A p.F15L . . . GPR83 10888 broad.mit.edu 36 11 93773977 93773977 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016540 exon1 c.G85A p.A29T . . . ANKRD49 54851 broad.mit.edu 36 11 93870897 93870897 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017704 exon3 c.C271T p.R91W ANKRD49,central_nervous_system,brain,Substitution - Missense,0 . . PIWIL4 143689 broad.mit.edu 36 11 93950203 93950203 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152431 exon4 c.G410T p.R137I . . . AMOTL1 154810 broad.mit.edu 36 11 94222932 94222932 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130847 exon7 c.G1654T p.E552X . . . SESN3 143686 broad.mit.edu 36 11 94558273 94558273 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144665 exon5 c.C557A p.S186Y . . . MAML2 84441 broad.mit.edu 36 11 95466229 95466229 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032427 exon2 c.G614T p.R205I . . . CCDC82 79780 broad.mit.edu 36 11 95756821 95756821 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024725 exon4 c.T739G p.S247A . . . JRKL 8690 broad.mit.edu 36 11 95763555 95763555 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003772 exon1 c.G94A p.A32T . . . SBF2 81846 broad.mit.edu 36 11 9823694 9823694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030962 exon24 c.C3104A p.S1035Y . . . CNTN5 53942 broad.mit.edu 36 11 99647107 99647107 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175566 exon17 c.T2016C p.F672F . . . CNTN5 53942 broad.mit.edu 36 11 99675228 99675228 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175566 exon19 c.G2288A p.R763Q . . . CNTN5 53942 broad.mit.edu 36 11 99716476 99716476 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175566 exon21 c.C2580T p.F860F . . . DYNC2H1 79659 broad.mit.edu 36 11 102504945 102504945 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DYNC2H1 79659 broad.mit.edu 36 11 102573871 102573871 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DYNC2H1 79659 broad.mit.edu 36 11 102855032 102855032 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GRIA4 2893 broad.mit.edu 36 11 105294862 105294862 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NPAT 4863 broad.mit.edu 36 11 107561268 107561268 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KDELC2 143888 broad.mit.edu 36 11 107855226 107855226 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BTG4 54766 broad.mit.edu 36 11 110889459 110889459 + 5'Flank SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DLAT 1737 broad.mit.edu 36 11 111409469 111409469 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 11 1170301 1170301 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FXYD6 53826 broad.mit.edu 36 11 117217117 117217117 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FXYD6 53826 broad.mit.edu 36 11 117217909 117217909 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCN4B 6330 broad.mit.edu 36 11 117519994 117519994 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ABCG4 64137 broad.mit.edu 36 11 118534143 118534143 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POU2F3 25833 broad.mit.edu 36 11 119645171 119645171 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARHGEF12 23365 broad.mit.edu 36 11 119805622 119805622 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MIR100 406892 broad.mit.edu 36 11 121528203 121528203 + RNA SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 11 123799042 123799042 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CHEK1 1111 broad.mit.edu 36 11 125004570 125004570 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIRREL3 84623 broad.mit.edu 36 11 125800834 125800834 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NCAPD3 23310 broad.mit.edu 36 11 133533180 133533180 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NCAPD3 23310 broad.mit.edu 36 11 133559858 133559858 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PDE3B 5140 broad.mit.edu 36 11 14809753 14809753 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SERGEF 26297 broad.mit.edu 36 11 17766199 17766199 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC6A5 9152 broad.mit.edu 36 11 20582400 20582400 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LUZP2 338645 broad.mit.edu 36 11 24710318 24710318 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 11 30872363 30872363 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DCDC1 341019 broad.mit.edu 36 11 31069615 31069615 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HIPK3 10114 broad.mit.edu 36 11 33306624 33306624 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HIPK3 10114 broad.mit.edu 36 11 33330398 33330398 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PAMR1 25891 broad.mit.edu 36 11 35419824 35419824 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NUP98 4928 broad.mit.edu 36 11 3759843 3759843 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CKAP5 9793 broad.mit.edu 36 11 46749113 46749113 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FOLH1 2346 broad.mit.edu 36 11 49147322 49147322 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FOLH1 2346 broad.mit.edu 36 11 49178581 49178581 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OR5T3 390154 broad.mit.edu 36 11 55776240 55776240 + 5'Flank SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TRIM6-TRIM34 445372 broad.mit.edu 36 11 5582444 5582444 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 11 55900609 55900609 + IGR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRG2 5553 broad.mit.edu 36 11 56913994 56913994 + 5'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CTNND1 1500 broad.mit.edu 36 11 57339644 57339644 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . OR9Q1 219956 broad.mit.edu 36 11 57642537 57642537 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MS4A8B 83661 broad.mit.edu 36 11 60225135 60225135 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DAGLA 747 broad.mit.edu 36 11 61258893 61258893 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM160A2 84067 broad.mit.edu 36 11 6200420 6200420 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GANAB 23193 broad.mit.edu 36 11 62154419 62154419 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EHD1 10938 broad.mit.edu 36 11 64378917 64378917 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ARFIP2 23647 broad.mit.edu 36 11 6457884 6457884 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAU 2197 broad.mit.edu 36 11 64645702 64645702 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MALAT1 378938 broad.mit.edu 36 11 65023441 65023441 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MALAT1 378938 broad.mit.edu 36 11 65026832 65026832 + RNA SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MALAT1 378938 broad.mit.edu 36 11 65027367 65027367 + RNA SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MALAT1 378938 broad.mit.edu 36 11 65029862 65029862 + RNA SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNHD1 144132 broad.mit.edu 36 11 6549796 6549796 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PGM2L1 283209 broad.mit.edu 36 11 73727156 73727156 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GDPD4 220032 broad.mit.edu 36 11 76621716 76621716 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . INTS4 92105 broad.mit.edu 36 11 77367678 77367678 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TUB 7275 broad.mit.edu 36 11 8016996 8016996 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM126A 84233 broad.mit.edu 36 11 85042956 85042956 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TMEM135 65084 broad.mit.edu 36 11 86708079 86708079 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCUBE2 57758 broad.mit.edu 36 11 9008869 9008869 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAT3 120114 broad.mit.edu 36 11 92209372 92209372 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MAML2 84441 broad.mit.edu 36 11 95466336 95466336 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SYT1 6857 broad.mit.edu 36 12 78203815 78203815 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005639 exon5 c.284delA p.E95fs . . . SLC5A8 160728 broad.mit.edu 36 12 100084476 100084476 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145913 exon12 c.A1453G p.N485D . . . SLC5A8 160728 broad.mit.edu 36 12 100102129 100102129 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145913 exon8 c.C966A p.L322L . . . UTP20 27340 broad.mit.edu 36 12 100204307 100204307 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon5 c.C404T p.S135L . . . UTP20 27340 broad.mit.edu 36 12 100223892 100223892 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon16 c.G1850A p.G617D . . . UTP20 27340 broad.mit.edu 36 12 100247281 100247281 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon27 c.G3340A p.A1114T . . . UTP20 27340 broad.mit.edu 36 12 100303509 100303509 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014503 exon61 c.C8074A p.L2692I . . . ARL1 400 broad.mit.edu 36 12 100314329 100314329 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177 exon5 c.G494A p.G165D . . . GNPTAB 79158 broad.mit.edu 36 12 100682878 100682878 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024312 exon13 c.G1948A p.E650K . . . DRAM1 55332 broad.mit.edu 36 12 100826154 100826154 + Silent SNP C T T rs61748065 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018370 exon4 c.C402T p.V134V . . . CLEC9A 283420 broad.mit.edu 36 12 10096595 10096595 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207345 exon4 c.C42A p.S14R . . . NUP37 79023 broad.mit.edu 36 12 101003715 101003715 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024057 exon5 c.C499T p.P167S . . . CLEC9A 283420 broad.mit.edu 36 12 10106930 10106930 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207345 exon7 c.G329A p.S110N . . . CLEC9A 283420 broad.mit.edu 36 12 10109368 10109368 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207345 exon9 c.T596C p.L199S . . . CLEC9A 283420 broad.mit.edu 36 12 10109434 10109434 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207345 exon9 c.C662T p.S221L . . . CLEC1A 51267 broad.mit.edu 36 12 10115291 10115291 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016511 exon6 c.G751A p.E251K . . . IGF1 3479 broad.mit.edu 36 12 101398242 101398242 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001111285 exon1 c.T48G p.F16L . . . PAH 5053 broad.mit.edu 36 12 101812773 101812773 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000277 exon3 c.A222C p.K74N . . . STAB2 55576 broad.mit.edu 36 12 102617076 102617076 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017564 exon34 c.C3655T p.H1219Y . . . STAB2 55576 broad.mit.edu 36 12 102655680 102655680 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017564 exon53 c.G5689A p.D1897N . . . STAB2 55576 broad.mit.edu 36 12 102666944 102666944 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017564 exon59 c.C6318A p.V2106V . . . STAB2 55576 broad.mit.edu 36 12 102680272 102680272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017564 exon67 c.C7450T p.R2484W . . . HSP90B1 7184 broad.mit.edu 36 12 102857475 102857475 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003299 exon8 c.G1034T p.R345I . . . TDG 6996 broad.mit.edu 36 12 102901080 102901080 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003211 exon6 c.G651T p.Q217H . . . HCFC2 29915 broad.mit.edu 36 12 103021106 103021106 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013320 exon15 c.G2304T p.K768N . . . EID3 493861 broad.mit.edu 36 12 103222808 103222808 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008394 exon1 c.A966C p.E322D . . . ALDH1L2 160428 broad.mit.edu 36 12 103944646 103944646 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034173 exon22 c.C2523T p.I841I . . . ALDH1L2 160428 broad.mit.edu 36 12 103979595 103979595 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034173 exon8 c.G987A p.T329T . . . KIAA1033 23325 broad.mit.edu 36 12 104038467 104038467 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015275 exon8 c.G523A p.A175T . . . KIAA1033 23325 broad.mit.edu 36 12 104078033 104078033 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015275 exon29 c.T3037G p.F1013V . . . POLR3B 55703 broad.mit.edu 36 12 105297989 105297989 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018082 exon9 c.G665A p.R222Q . . . RFX4 5992 broad.mit.edu 36 12 105602739 105602739 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032491 exon1 c.C18T p.F6F . . . RFX4 5992 broad.mit.edu 36 12 105650095 105650095 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213594 exon14 c.C1409A p.S470Y . . . MTERFD3 80298 broad.mit.edu 36 12 105895923 105895923 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025198 exon3 c.C700A p.L234I . . . WSCD2 9671 broad.mit.edu 36 12 107145028 107145028 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014653 exon6 c.C936T p.C312C . . . CMKLR1 1240 broad.mit.edu 36 12 107210118 107210118 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004072 exon3 c.G746A p.R249H . . . FICD 11153 broad.mit.edu 36 12 107437232 107437232 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007076 exon3 c.C1227T p.G409G . . . SART3 9733 broad.mit.edu 36 12 107444151 107444151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014706 exon16 c.G2225A p.R742H . . . SSH1 54434 broad.mit.edu 36 12 107735002 107735002 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161330 exon5 c.C342T p.S114S . . . DAO 1610 broad.mit.edu 36 12 107817336 107817336 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001917 exon10 c.C868T p.R290W . . . UNG 7374 broad.mit.edu 36 12 108020783 108020783 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080911 exon2 c.A296T p.K99M . . . ACACB 32 broad.mit.edu 36 12 108061917 108061917 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon1 c.C324T p.D108D . . . ACACB 32 broad.mit.edu 36 12 108090127 108090127 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon3 c.G830A p.R277H . . . ACACB 32 broad.mit.edu 36 12 108107926 108107926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093 exon11 c.G1978A p.E660K . . . MYO1H 283446 broad.mit.edu 36 12 108318671 108318671 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001101421 exon3 c.C342A p.A114A . . . TCHP 84260 broad.mit.edu 36 12 108829731 108829731 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143852 exon6 c.G543T p.E181D . . . GIT2 9815 broad.mit.edu 36 12 108869509 108869509 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135213 exon15 c.C1432A p.L478I . . . ANKRD13A 88455 broad.mit.edu 36 12 108951753 108951753 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033121 exon11 c.G1164A p.T388T . . . ANAPC7 51434 broad.mit.edu 36 12 109303986 109303986 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001137664 exon8 c.T1188C p.F396F . . . C12orf24 29902 broad.mit.edu 36 12 109408563 109408563 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013300 exon4 c.A357C p.K119N . . . RAD9B 144715 broad.mit.edu 36 12 109437322 109437322 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152442 exon6 c.G573T p.K191N . . . TAS2R13 50838 broad.mit.edu 36 12 10952692 10952692 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_023920 exon1 c.G473A p.R158Q . . . MYL2 4633 broad.mit.edu 36 12 109835305 109835305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000432 exon6 c.C380T p.A127V . . . CUX2 23316 broad.mit.edu 36 12 110270493 110270493 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015267 exon22 c.C4442A p.A1481D . . . BRAP 8315 broad.mit.edu 36 12 110605460 110605460 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006768 exon2 c.G117A p.T39T . . . NAA25 80018 broad.mit.edu 36 12 110964246 110964246 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024953 exon20 c.C2420A p.S807Y . . . NAA25 80018 broad.mit.edu 36 12 110996917 110996917 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024953 exon9 c.G811A p.D271N . . . C12orf51 283450 broad.mit.edu 36 12 111085324 111085324 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001109662 exon74 c.G12509A p.R4170H . . . C12orf51 283450 broad.mit.edu 36 12 111172473 111172473 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001109662 exon24 c.G3292T p.E1098X . . . RPL6 6128 broad.mit.edu 36 12 111329012 111329012 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024662 exon4 c.T402C p.S134S . . . RPH3A 22895 broad.mit.edu 36 12 111787693 111787693 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143854 exon6 c.C322T p.L108L . . . OAS1 4938 broad.mit.edu 36 12 111830984 111830984 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032409 exon2 c.C441T p.F147F . . . OAS2 4939 broad.mit.edu 36 12 111917636 111917636 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002535 exon3 c.C601A p.L201I . . . OAS2 4939 broad.mit.edu 36 12 111927368 111927368 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002535 exon7 c.G1426A p.E476K . . . DTX1 1840 broad.mit.edu 36 12 111999727 111999727 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004416 exon2 c.C375A p.I125I . . . RASAL1 8437 broad.mit.edu 36 12 112043825 112043825 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004658 exon6 c.G300A p.G100G . . . TPCN1 53373 broad.mit.edu 36 12 112209199 112209199 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143819 exon20 c.C1767T p.F589F . . . SLC24A6 80024 broad.mit.edu 36 12 112243494 112243494 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024959 exon3 c.T199G p.F67V . . . PRB4 5545 broad.mit.edu 36 12 11352663 11352663 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002723 exon3 c.G521A p.R174Q . . . PRB2 653247 broad.mit.edu 36 12 11437159 11437159 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006248 exon3 c.G1120T p.G374C . . . MED13L 23389 broad.mit.edu 36 12 114905392 114905392 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015335 exon21 c.C4868T p.A1623V . . . MAP1LC3B2 643246 broad.mit.edu 36 12 115498240 115498240 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085481 exon2 c.G110A p.R37Q . . . NOS1 4842 broad.mit.edu 36 12 116148879 116148879 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000620 exon24 c.C3696T p.F1232F . . . NOS1 4842 broad.mit.edu 36 12 116233692 116233692 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000620 exon3 c.C814T p.P272S . . . NOS1 4842 broad.mit.edu 36 12 116253108 116253108 + Silent SNP G A A rs41459647 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000620 exon2 c.C150T p.G50G . . . TAOK3 51347 broad.mit.edu 36 12 117167107 117167107 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016281 exon4 c.C167A p.S56Y . . . CCDC64 92558 broad.mit.edu 36 12 118983985 118983985 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207311 exon3 c.T734G p.I245S . . . GCN1L1 10985 broad.mit.edu 36 12 119095850 119095850 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006836 exon14 c.C1356A p.A452A . . . ETV6 2120 broad.mit.edu 36 12 11928741 11928741 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001987 exon6 c.C1105T p.R369W . . . CABP1 9478 broad.mit.edu 36 12 119582407 119582407 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033677 exon3 c.C711T p.F237F . . . OASL 8638 broad.mit.edu 36 12 119953800 119953800 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003733 exon3 c.C485A p.P162H . . . P2RX4 5025 broad.mit.edu 36 12 120150972 120150972 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002560 exon7 c.A667G p.T223A . . . HPD 3242 broad.mit.edu 36 12 120779720 120779720 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002150 exon4 c.C95T p.A32V . . . WDR66 144406 broad.mit.edu 36 12 120854087 120854087 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178003 exon4 c.G800A p.R267Q . . . WDR66 144406 broad.mit.edu 36 12 120871306 120871306 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178003 exon8 c.G1225T p.E409X . . . LRRC43 254050 broad.mit.edu 36 12 121243269 121243269 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098519 exon7 c.G1114T p.E372X . . . CLIP1 6249 broad.mit.edu 36 12 121391924 121391924 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198240 exon9 c.G1642A p.A548T . . . KNTC1 9735 broad.mit.edu 36 12 121592597 121592597 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014708 exon6 c.A493G p.T165A . . . KNTC1 9735 broad.mit.edu 36 12 121641147 121641147 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014708 exon41 c.G4040A p.G1347D . . . KNTC1 9735 broad.mit.edu 36 12 121655555 121655555 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014708 exon50 c.G5354T p.R1785I . . . GPR109A 338442 broad.mit.edu 36 12 121753645 121753645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177551 exon1 c.C139T p.L47F . . . CCDC62 84660 broad.mit.edu 36 12 121851795 121851795 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201435 exon9 c.C1149T p.I383I . . . SBNO1 55206 broad.mit.edu 36 12 122361564 122361564 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018183 exon24 c.C3283A p.L1095I . . . SBNO1 55206 broad.mit.edu 36 12 122370419 122370419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018183 exon19 c.G2777A p.R926Q . . . TMED2 10959 broad.mit.edu 36 12 122635227 122635227 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006815 exon1 c.G91T p.E31X . . . GTF2H3 2967 broad.mit.edu 36 12 122698566 122698566 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001516 exon4 c.G304A p.E102K . . . DNAH10 196385 broad.mit.edu 36 12 122822185 122822185 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon3 c.A200C p.K67T . . . DNAH10 196385 broad.mit.edu 36 12 122831706 122831706 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon6 c.G565T p.E189X . . . DNAH10 196385 broad.mit.edu 36 12 122864277 122864277 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon20 c.G3291T p.K1097N . . . DNAH10 196385 broad.mit.edu 36 12 122871128 122871128 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon23 c.A3695C p.K1232T . . . DNAH10 196385 broad.mit.edu 36 12 122877271 122877271 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon24 c.G3910A p.A1304T . . . DNAH10 196385 broad.mit.edu 36 12 122886011 122886011 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon27 c.G4531A p.D1511N . . . LRP6 4040 broad.mit.edu 36 12 12288677 12288677 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002336 exon2 c.G235T p.E79X . . . DNAH10 196385 broad.mit.edu 36 12 122889102 122889102 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon28 c.C4695T p.F1565F . . . DNAH10 196385 broad.mit.edu 36 12 122907618 122907618 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon36 c.T6147C p.V2049V . . . DNAH10 196385 broad.mit.edu 36 12 122915148 122915148 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon39 c.C6608T p.S2203F . . . DNAH10 196385 broad.mit.edu 36 12 122918594 122918594 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon42 c.T7140G p.V2380V . . . DNAH10 196385 broad.mit.edu 36 12 122974265 122974265 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon65 c.C11155T p.L3719L . . . DNAH10 196385 broad.mit.edu 36 12 122981931 122981931 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207437 exon73 c.G12521A p.R4174Q . . . ZNF664 144348 broad.mit.edu 36 12 123062716 123062716 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152437 exon6 c.T72C p.I24I . . . ZNF664 144348 broad.mit.edu 36 12 123063300 123063300 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152437 exon6 c.G656A p.R219K . . . AACS 65985 broad.mit.edu 36 12 124165033 124165033 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023928 exon9 c.G973T p.D325Y . . . TMEM132D 121256 broad.mit.edu 36 12 128135060 128135060 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133448 exon6 c.C1584T p.I528I . . . APOLD1 81575 broad.mit.edu 36 12 12831622 12831622 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030817 exon2 c.C516A p.F172L . . . FZD10 11211 broad.mit.edu 36 12 129213828 129213828 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007197 exon1 c.G388T p.D130Y . . . PIWIL1 9271 broad.mit.edu 36 12 129405098 129405098 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004764 exon10 c.C1108T p.R370W . . . PIWIL1 9271 broad.mit.edu 36 12 129407996 129407996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004764 exon14 c.G1610A p.R537K . . . RIMBP2 23504 broad.mit.edu 36 12 129458227 129458227 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015347 exon16 c.C2922T p.V974V . . . RIMBP2 23504 broad.mit.edu 36 12 129463124 129463124 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015347 exon15 c.G2814T p.E938D . . . GPRC5D 55507 broad.mit.edu 36 12 12993747 12993747 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018654 exon1 c.G839A p.C280Y . . . GPR133 283383 broad.mit.edu 36 12 130005144 130005144 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198827 exon2 c.C89A p.S30X . . . SFSWAP 6433 broad.mit.edu 36 12 130815083 130815083 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004592 exon12 c.C1850A p.S617Y . . . EP400 57634 broad.mit.edu 36 12 131012341 131012341 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015409 exon2 c.G1224T p.K408N . . . EP400 57634 broad.mit.edu 36 12 131063625 131063625 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015409 exon17 c.G3557A p.R1186H . . . EP400 57634 broad.mit.edu 36 12 131064389 131064389 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015409 exon19 c.G3898A p.E1300K . . . GSG1 83445 broad.mit.edu 36 12 13133433 13133433 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080555 exon3 c.T409C p.S137P . . . POLE 5426 broad.mit.edu 36 12 131760286 131760286 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006231 exon13 c.C1307G p.P436R . . . POLE 5426 broad.mit.edu 36 12 131766169 131766169 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006231 exon6 c.G565A p.A189T . . . ANKLE2 23141 broad.mit.edu 36 12 131834494 131834494 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015114 exon5 c.G1227T p.K409N . . . Unknown 0 broad.mit.edu 36 12 132012266 132012266 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164715 exon5 c.C1785T p.S595S . . . Unknown 0 broad.mit.edu 36 12 132013161 132013161 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164715 exon5 c.C890T p.S297L . . . ZNF26 7574 broad.mit.edu 36 12 132097903 132097903 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019591 exon4 c.A1365C p.E455D . . . ZNF84 7637 broad.mit.edu 36 12 132145076 132145076 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127372 exon5 c.G1702T p.E568X . . . ZNF84 7637 broad.mit.edu 36 12 132145482 132145482 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127372 exon5 c.G2108T p.R703I . . . ZNF10 7556 broad.mit.edu 36 12 132242266 132242266 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015394 exon5 c.C361A p.L121I . . . ZNF268 10795 broad.mit.edu 36 12 132289316 132289316 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003415 exon6 c.G971T p.R324I . . . GRIN2B 2904 broad.mit.edu 36 12 13614081 13614081 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000834 exon11 c.C2309A p.S770Y . . . GRIN2B 2904 broad.mit.edu 36 12 13616072 13616072 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000834 exon10 c.A2104G p.M702V . . . IQSEC3 440073 broad.mit.edu 36 12 137015 137015 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170738 exon7 c.C2337A p.I779I . . . GRIN2B 2904 broad.mit.edu 36 12 13797808 13797808 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000834 exon3 c.C720A p.I240I . . . ATF7IP 55729 broad.mit.edu 36 12 14469347 14469347 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018179 exon2 c.A1231G p.N411D . . . ERP27 121506 broad.mit.edu 36 12 14958957 14958957 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152321 exon7 c.G801T p.K267N . . . PTPRO 5800 broad.mit.edu 36 12 15541508 15541508 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002848 exon3 c.C412A p.L138M . . . PTPRO 5800 broad.mit.edu 36 12 15609801 15609801 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030669 exon6 c.A286C p.N96H . . . SLC6A12 6539 broad.mit.edu 36 12 177416 177416 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122848 exon9 c.G861A p.A287A . . . PIK3C2G 5288 broad.mit.edu 36 12 18468225 18468225 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004570 exon17 c.C2366T p.A789V . . . PIK3C2G 5288 broad.mit.edu 36 12 18582458 18582458 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004570 exon24 c.G3302A p.R1101H . . . PLEKHA5 54477 broad.mit.edu 36 12 19366761 19366761 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019012 exon15 c.G2032T p.E678X . . . PDE3A 5139 broad.mit.edu 36 12 20681424 20681424 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000921 exon9 c.C2125A p.R709S . . . SLCO1C1 53919 broad.mit.edu 36 12 20745552 20745552 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017435 exon3 c.G163C p.A55P . . . SLCO1C1 53919 broad.mit.edu 36 12 20796710 20796710 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017435 exon15 c.G2120A p.G707D . . . SLCO1B3 28234 broad.mit.edu 36 12 20922077 20922077 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019844 exon9 c.G1075A p.V359I . . . LST-3TM12 338821 broad.mit.edu 36 12 21063501 21063501 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009562 exon2 c.A138G p.R46R . . . LST-3TM12 338821 broad.mit.edu 36 12 21087608 21087608 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009562 exon6 c.A660C p.I220I . . . SLCO1B1 10599 broad.mit.edu 36 12 21241362 21241362 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006446 exon8 c.G943T p.G315X . . . SLCO1B1 10599 broad.mit.edu 36 12 21266559 21266559 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006446 exon13 c.G1741A p.A581T . . . SLCO1A2 6579 broad.mit.edu 36 12 21336401 21336401 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134431 exon13 c.C1574A p.S525Y . . . SLCO1A2 6579 broad.mit.edu 36 12 21338199 21338199 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134431 exon12 c.C1384T p.L462L . . . SLCO1A2 6579 broad.mit.edu 36 12 21351109 21351109 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134431 exon6 c.T416G p.I139S . . . GOLT1B 51026 broad.mit.edu 36 12 21552640 21552640 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016072 exon3 c.C174A p.F58L . . . GYS2 2998 broad.mit.edu 36 12 21620199 21620199 + Silent SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021957 exon3 c.C363G p.G121G . . . KCNJ8 3764 broad.mit.edu 36 12 21810231 21810231 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004982 exon3 c.G968A p.R323H . . . ABCC9 10060 broad.mit.edu 36 12 21845379 21845379 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020297 exon38 c.C4516T p.R1506X . . . ABCC9 10060 broad.mit.edu 36 12 21856304 21856304 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020297 exon34 c.G4157A p.R1386H . . . ABCC9 10060 broad.mit.edu 36 12 21889883 21889883 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020297 exon24 c.C3017T p.S1006L . . . ABCC9 10060 broad.mit.edu 36 12 21932064 21932064 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020297 exon13 c.C1874T p.S625L . . . ABCC9 10060 broad.mit.edu 36 12 21959935 21959935 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020297 exon5 c.A750G p.K250K . . . CMAS 55907 broad.mit.edu 36 12 22105521 22105521 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018686 exon6 c.A828C p.K276N . . . CMAS 55907 broad.mit.edu 36 12 22109506 22109506 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018686 exon8 c.A1299G p.Q433Q . . . SLC6A13 6540 broad.mit.edu 36 12 222158 222158 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016615 exon4 c.A361G p.I121V . . . ST8SIA1 6489 broad.mit.edu 36 12 22245813 22245813 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003034 exon5 c.C1011T p.I337I . . . ST8SIA1 6489 broad.mit.edu 36 12 22331488 22331488 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003034 exon2 c.A243C p.Q81H . . . KIAA0528 9847 broad.mit.edu 36 12 22494083 22494083 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014802 exon25 c.C2881A p.L961I . . . KIAA0528 9847 broad.mit.edu 36 12 22515037 22515037 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014802 exon21 c.T2434G p.S812A . . . KIAA0528 9847 broad.mit.edu 36 12 22515625 22515625 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014802 exon20 c.C2333A p.S778Y . . . SOX5 6660 broad.mit.edu 36 12 23778916 23778916 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152989 exon9 c.A740G p.H247R . . . SOX5 6660 broad.mit.edu 36 12 23940153 23940153 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152989 exon5 c.G72T p.Q24H . . . BCAT1 586 broad.mit.edu 36 12 24893995 24893995 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178092 exon4 c.G483T p.K161N . . . CASC1 55259 broad.mit.edu 36 12 25163439 25163439 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082972 exon12 c.G1477A p.E493K . . . CASC1 55259 broad.mit.edu 36 12 25188640 25188640 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082972 exon9 c.G1102T p.E368X . . . CASC1 55259 broad.mit.edu 36 12 25188873 25188873 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082972 exon9 c.G869T p.R290I . . . CASC1 55259 broad.mit.edu 36 12 25202710 25202710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082972 exon4 c.G335A p.R112Q . . . LYRM5 144363 broad.mit.edu 36 12 25248418 25248418 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001660 exon3 c.G178A p.E60K . . . CACNA1C 775 broad.mit.edu 36 12 2572726 2572726 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129842 exon19 c.C2617T p.P873S . . . BHLHE41 79365 broad.mit.edu 36 12 26168974 26168974 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030762 exon1 c.C6T p.D2D . . . ITPR2 3709 broad.mit.edu 36 12 26384447 26384447 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002223 exon56 c.C7939T p.R2647W . . . ITPR2 3709 broad.mit.edu 36 12 26538359 26538359 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002223 exon39 c.A5364C p.Q1788H . . . C12orf11 55726 broad.mit.edu 36 12 26950518 26950518 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018164 exon16 c.C2065A p.L689I . . . TM7SF3 51768 broad.mit.edu 36 12 27024104 27024104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016551 exon9 c.G1069A p.V357I . . . KDM5A 5927 broad.mit.edu 36 12 272448 272448 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042603 exon27 c.A4604T p.K1535M . . . STK38L 23012 broad.mit.edu 36 12 27352597 27352597 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015000 exon4 c.G245T p.R82M . . . ARNTL2 56938 broad.mit.edu 36 12 27445777 27445777 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020183 exon12 c.G1321T p.D441Y . . . REP15 387849 broad.mit.edu 36 12 27740812 27740812 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029874 exon1 c.T50C p.V17A . . . OVCH1 341350 broad.mit.edu 36 12 29489583 29489583 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183378 exon23 c.C2776T p.L926F . . . IPO8 10526 broad.mit.edu 36 12 30678360 30678360 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190995 exon19 c.G2208A p.A736A . . . CAPRIN2 65981 broad.mit.edu 36 12 30767507 30767507 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001002259 exon11 c.G1996T p.E666X . . . CAPRIN2 65981 broad.mit.edu 36 12 30777833 30777833 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002259 exon5 c.A889G p.T297A . . . FAM60A 58516 broad.mit.edu 36 12 31338021 31338021 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135811 exon5 c.G340A p.E114K . . . DENND5B 160518 broad.mit.edu 36 12 31491965 31491965 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144973 exon6 c.C1635A p.S545S . . . H3F3C 440093 broad.mit.edu 36 12 31836101 31836101 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013699 exon1 c.C267T p.V89V . . . C12orf35 55196 broad.mit.edu 36 12 32028484 32028484 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018169 exon4 c.A3328C p.S1110R . . . C12orf35 55196 broad.mit.edu 36 12 32031512 32031512 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018169 exon5 c.G5075A p.S1692N . . . DNM1L 10059 broad.mit.edu 36 12 32784422 32784422 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012062 exon17 c.C1865T p.A622V . . . PKP2 5318 broad.mit.edu 36 12 32885392 32885392 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004572 exon7 c.T1525G p.L509V . . . SYT10 341359 broad.mit.edu 36 12 33470528 33470528 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198992 exon2 c.T321A p.V107V . . . ALG10B 144245 broad.mit.edu 36 12 37000560 37000560 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013620 exon3 c.C700A p.L234I . . . CPNE8 144402 broad.mit.edu 36 12 37334000 37334000 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153634 exon20 c.C1646T p.A549V . . . ABCD2 225 broad.mit.edu 36 12 38298815 38298815 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005164 exon1 c.C870T p.G290G . . . LRRK2 120892 broad.mit.edu 36 12 38985901 38985901 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon28 c.C3825A p.V1275V . . . LRRK2 120892 broad.mit.edu 36 12 38994146 38994146 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon32 c.A4642C p.I1548L . . . LRRK2 120892 broad.mit.edu 36 12 39036194 39036194 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198578 exon46 c.A6781C p.N2261H . . . CNTN1 1272 broad.mit.edu 36 12 39598725 39598725 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001843 exon4 c.G112T p.G38X . . . CNTN1 1272 broad.mit.edu 36 12 39694366 39694366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001843 exon18 c.C2183T p.A728V . . . CNTN1 1272 broad.mit.edu 36 12 39696850 39696850 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001843 exon19 c.C2284T p.P762S . . . PDZRN4 29951 broad.mit.edu 36 12 40118026 40118026 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013377 exon1 c.T13G p.L5V . . . PDZRN4 29951 broad.mit.edu 36 12 40252536 40252536 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164595 exon10 c.G1688A p.R563Q . . . PDZRN4 29951 broad.mit.edu 36 12 40252757 40252757 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164595 exon10 c.A1909G p.I637V . . . GXYLT1 283464 broad.mit.edu 36 12 40799108 40799108 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099650 exon2 c.T354C p.I118I . . . PRICKLE1 144165 broad.mit.edu 36 12 41140309 41140309 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144882 exon8 c.C2065A p.L689I . . . PRICKLE1 144165 broad.mit.edu 36 12 41144593 41144593 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144882 exon7 c.C1510A p.H504N . . . PRICKLE1 144165 broad.mit.edu 36 12 41149554 41149554 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144882 exon4 c.C349A p.L117M . . . ADAMTS20 80070 broad.mit.edu 36 12 42120010 42120010 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025003 exon17 c.G2420T p.R807I . . . ADAMTS20 80070 broad.mit.edu 36 12 42144762 42144762 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025003 exon10 c.G1408T p.E470X . . . ADAMTS20 80070 broad.mit.edu 36 12 42170493 42170493 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025003 exon7 c.T1089C p.C363C . . . PUS7L 83448 broad.mit.edu 36 12 42426144 42426144 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098614 exon4 c.G1235T p.R412I . . . PUS7L 83448 broad.mit.edu 36 12 42428620 42428620 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098614 exon3 c.A970G p.K324E . . . TWF1 5756 broad.mit.edu 36 12 42477451 42477451 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002822 exon7 c.G783T p.K261N . . . TMEM117 84216 broad.mit.edu 36 12 42979707 42979707 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032256 exon6 c.G686A p.R229Q . . . NELL2 4753 broad.mit.edu 36 12 43457157 43457157 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145108 exon7 c.G697T p.D233Y . . . NELL2 4753 broad.mit.edu 36 12 43459942 43459942 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145108 exon4 c.G466A p.A156T . . . ANO6 196527 broad.mit.edu 36 12 44047831 44047831 + Silent SNP C T T rs61745715 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142678 exon9 c.C1038T p.C346C . . . ARID2 196528 broad.mit.edu 36 12 44516958 44516958 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152641 exon8 c.C940T p.R314C . . . SRSF2IP 9169 broad.mit.edu 36 12 44603182 44603182 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004719 exon13 c.T3929C p.V1310A . . . SRSF2IP 9169 broad.mit.edu 36 12 44606500 44606500 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004719 exon11 c.G3251T p.R1084I . . . SRSF2IP 9169 broad.mit.edu 36 12 44606672 44606672 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004719 exon11 c.A3079C p.K1027Q . . . SRSF2IP 9169 broad.mit.edu 36 12 44606894 44606894 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004719 exon11 c.T2857C p.S953P . . . SRSF2IP 9169 broad.mit.edu 36 12 44607095 44607095 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004719 exon11 c.G2656T p.E886X . . . C12orf4 57102 broad.mit.edu 36 12 4498273 4498273 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020374 exon7 c.G763T p.E255X . . . C12orf4 57102 broad.mit.edu 36 12 4504701 4504701 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020374 exon6 c.C708A p.N236K . . . RAD51AP1 10635 broad.mit.edu 36 12 4535786 4535786 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006479 exon8 c.C728T p.S243L . . . SLC38A4 55089 broad.mit.edu 36 12 45464683 45464683 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143824 exon6 c.G402A p.G134G . . . AKAP3 10566 broad.mit.edu 36 12 4606858 4606858 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006422 exon4 c.G1471T p.D491Y . . . AKAP3 10566 broad.mit.edu 36 12 4607584 4607584 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006422 exon4 c.C745T p.R249C . . . NDUFA9 4704 broad.mit.edu 36 12 4666410 4666410 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005002 exon11 c.G1009T p.D337Y . . . OR8S1 341568 broad.mit.edu 36 12 47205977 47205977 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005203 exon1 c.C296T p.A99V . . . GALNT8 26290 broad.mit.edu 36 12 4725643 4725643 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017417 exon6 c.A1131T p.G377G . . . C12orf41 54934 broad.mit.edu 36 12 47340523 47340523 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017822 exon8 c.G1120A p.E374K . . . C12orf41 54934 broad.mit.edu 36 12 47359156 47359156 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017822 exon4 c.G475A p.D159N . . . CCNT1 904 broad.mit.edu 36 12 47374093 47374093 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001240 exon9 c.G1171T p.E391X . . . CACNB3 784 broad.mit.edu 36 12 47506417 47506417 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000725 exon10 c.C743T p.A248V . . . WNT10B 7480 broad.mit.edu 36 12 47646357 47646357 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003394 exon5 c.C958T p.R320X . . . MLL2 8085 broad.mit.edu 36 12 47728812 47728812 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003482 exon13 c.A4028G p.D1343G . . . KCNA6 3742 broad.mit.edu 36 12 4789895 4789895 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002235 exon1 c.G427A p.E143K . . . DNAJC22 79962 broad.mit.edu 36 12 48029397 48029397 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024902 exon2 c.G475A p.A159T . . . MCRS1 10445 broad.mit.edu 36 12 48238989 48238989 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001012300 exon13 c.C1245A p.F415L . . . FAM186B 84070 broad.mit.edu 36 12 48279997 48279997 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032130 exon4 c.C1693T p.R565X . . . PRPF40B 25766 broad.mit.edu 36 12 48323355 48323355 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031698 exon22 c.G2225A p.G742D . . . FMNL3 91010 broad.mit.edu 36 12 48338498 48338498 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175736 exon6 c.T599G p.V200G . . . RACGAP1 29127 broad.mit.edu 36 12 48685422 48685422 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013277 exon6 c.T309C p.I103I . . . KCNA1 3736 broad.mit.edu 36 12 4891025 4891025 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000217 exon2 c.G220A p.D74N . . . KCNA1 3736 broad.mit.edu 36 12 4891313 4891313 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000217 exon2 c.G508A p.A170T . . . KCNA1 3736 broad.mit.edu 36 12 4891689 4891689 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000217 exon2 c.G884A p.R295H . . . LARP4 113251 broad.mit.edu 36 12 49155739 49155739 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052879 exon16 c.A2000C p.K667T . . . DIP2B 57609 broad.mit.edu 36 12 49354578 49354578 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173602 exon6 c.C695A p.S232Y . . . DIP2B 57609 broad.mit.edu 36 12 49371125 49371125 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173602 exon13 c.A1578G p.V526V . . . TMPRSS12 283471 broad.mit.edu 36 12 49567465 49567465 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182559 exon5 c.T949G p.F317V . . . METTL7A 25840 broad.mit.edu 36 12 49610008 49610008 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014033 exon2 c.G543A p.S181S . . . METTL7A 25840 broad.mit.edu 36 12 49610116 49610116 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014033 exon2 c.C651A p.F217L . . . LETMD1 25875 broad.mit.edu 36 12 49736215 49736215 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024668 exon6 c.G514T p.A172S . . . TFCP2 7024 broad.mit.edu 36 12 49797780 49797780 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173452 exon3 c.C292T p.R98X . . . TFCP2 7024 broad.mit.edu 36 12 49852439 49852439 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173452 exon1 c.G34A p.E12K . . . BIN2 51411 broad.mit.edu 36 12 49983168 49983168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016293 exon3 c.G187A p.D63N . . . GALNT6 11226 broad.mit.edu 36 12 50044327 50044327 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007210 exon6 c.C894T p.I298I . . . ACVR1B 91 broad.mit.edu 36 12 50661209 50661209 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020328 exon4 c.G770A p.R257H . . . KRT75 9119 broad.mit.edu 36 12 51108701 51108701 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004693 exon6 c.C1129T p.L377L . . . KRT75 9119 broad.mit.edu 36 12 51112094 51112094 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004693 exon3 c.G737A p.R246H . . . KRT5 3852 broad.mit.edu 36 12 51197678 51197678 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000424 exon5 c.G1055A p.R352H . . . KRT73 319101 broad.mit.edu 36 12 51298354 51298354 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175068 exon1 c.C222T p.G74G . . . KRT1 3848 broad.mit.edu 36 12 51357189 51357189 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006121 exon6 c.G1175T p.R392I . . . KRT77 374454 broad.mit.edu 36 12 51377855 51377855 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175078 exon2 c.G636A p.E212E . . . KRT77 374454 broad.mit.edu 36 12 51383019 51383019 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175078 exon1 c.A467T p.E156V . . . KRT18 3875 broad.mit.edu 36 12 51630914 51630914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_199187 exon4 c.C614T p.A205V . . . MFSD5 84975 broad.mit.edu 36 12 51933404 51933404 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032889 exon2 c.G518A p.R173Q . . . AMHR2 269 broad.mit.edu 36 12 52104836 52104836 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020547 exon3 c.C309T p.G103G . . . MAP3K12 7786 broad.mit.edu 36 12 52166545 52166545 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193511 exon3 c.G574T p.E192X . . . ATF7 11016 broad.mit.edu 36 12 52197230 52197230 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006856 exon12 c.G1410A p.S470S . . . HOXC13 3229 broad.mit.edu 36 12 52625224 52625224 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017410 exon2 c.G910T p.V304L . . . HOXC8 3224 broad.mit.edu 36 12 52689683 52689683 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022658 exon1 c.C348A p.S116S . . . HOXC6 3223 broad.mit.edu 36 12 52708889 52708889 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153693 exon2 c.C71A p.S24Y . . . HOXC4 3221 broad.mit.edu 36 12 52734303 52734303 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014620 exon3 c.G330T p.P110P . . . HNRNPA1 3178 broad.mit.edu 36 12 52963929 52963929 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031157 exon9 c.T974G p.F325C . . . NFE2 4778 broad.mit.edu 36 12 52973120 52973120 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006163 exon3 c.G427T p.E143X . . . GPR84 53831 broad.mit.edu 36 12 53043584 53043584 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020370 exon2 c.T319C p.S107P . . . ITGA5 3678 broad.mit.edu 36 12 53078715 53078715 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002205 exon28 c.C2876T p.A959V . . . ITGA5 3678 broad.mit.edu 36 12 53084513 53084513 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002205 exon14 c.G1431A p.G477G . . . ITGA5 3678 broad.mit.edu 36 12 53085933 53085933 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002205 exon10 c.C951A p.F317L . . . KIAA0748 9840 broad.mit.edu 36 12 53642623 53642623 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098815 exon9 c.C1326A p.L442L . . . OR6C6 283365 broad.mit.edu 36 12 53974369 53974369 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005493 exon1 c.G915T p.K305N . . . OR6C1 390321 broad.mit.edu 36 12 54000725 54000725 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005182 exon1 c.C75A p.I25I . . . OR6C1 390321 broad.mit.edu 36 12 54001001 54001001 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005182 exon1 c.C351A p.S117S . . . OR6C70 390327 broad.mit.edu 36 12 54149487 54149487 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005499 exon1 c.G703A p.A235T . . . BLOC1S1 2647 broad.mit.edu 36 12 54399577 54399577 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001487 exon4 c.C379T p.R127W . . . CD63 967 broad.mit.edu 36 12 54406282 54406282 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001780 exon6 c.G457T p.D153Y . . . GDF11 10220 broad.mit.edu 36 12 54428963 54428963 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005811 exon2 c.G772A p.E258K . . . DNAJC14 85406 broad.mit.edu 36 12 54508030 54508030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032364 exon2 c.G680A p.R227Q . . . ERBB3 2065 broad.mit.edu 36 12 54768704 54768704 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001982 exon8 c.A985G p.K329E . . . ANKRD52 283373 broad.mit.edu 36 12 54933806 54933806 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173595 exon9 c.C952T p.R318C . . . ANKRD52 283373 broad.mit.edu 36 12 54934288 54934288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173595 exon8 c.G736A p.A246T . . . ANKRD52 283373 broad.mit.edu 36 12 54934705 54934705 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173595 exon7 c.G617A p.G206D . . . CS 1431 broad.mit.edu 36 12 54956217 54956217 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004077 exon7 c.C618T p.I206I . . . TIMELESS 8914 broad.mit.edu 36 12 55103027 55103027 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003920 exon19 c.C2309T p.A770V . . . BAZ2A 11176 broad.mit.edu 36 12 55279872 55279872 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon26 c.A5059G p.N1687D . . . BAZ2A 11176 broad.mit.edu 36 12 55280121 55280121 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon25 c.G4925A p.R1642H . . . BAZ2A 11176 broad.mit.edu 36 12 55295305 55295305 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013449 exon3 c.G496T p.E166X . . . MYO1A 4640 broad.mit.edu 36 12 55716858 55716858 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005379 exon21 c.G2239A p.V747M . . . MYO1A 4640 broad.mit.edu 36 12 55717032 55717032 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005379 exon20 c.G2166T p.K722N . . . MYO1A 4640 broad.mit.edu 36 12 55719274 55719274 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005379 exon15 c.C1321T p.L441F . . . STAT6 6778 broad.mit.edu 36 12 55786842 55786842 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178078 exon5 c.G379T p.E127X . . . LRP1 4035 broad.mit.edu 36 12 55825131 55825131 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002332 exon5 c.C558A p.R186R . . . LRP1 4035 broad.mit.edu 36 12 55853897 55853897 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002332 exon22 c.G3414T p.E1138D . . . LRP1 4035 broad.mit.edu 36 12 55855653 55855653 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002332 exon23 c.C3691A p.L1231I . . . LRP1 4035 broad.mit.edu 36 12 55865799 55865799 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002332 exon41 c.G6682A p.E2228K . . . INHBC 3626 broad.mit.edu 36 12 56115235 56115235 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005538 exon1 c.G299A p.S100N . . . GLI1 2735 broad.mit.edu 36 12 56143838 56143838 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005269 exon2 c.G97T p.E33X . . . MARS 4141 broad.mit.edu 36 12 56169126 56169126 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004990 exon2 c.G167A p.G56D . . . MBD6 114785 broad.mit.edu 36 12 56207629 56207629 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052897 exon8 c.G2155A p.A719T . . . KIF5A 3798 broad.mit.edu 36 12 56230437 56230437 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004984 exon1 c.G116T p.S39I . . . KIF5A 3798 broad.mit.edu 36 12 56249100 56249100 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004984 exon9 c.G802A p.A268T . . . PIP4K2C 79837 broad.mit.edu 36 12 56279212 56279212 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146258 exon5 c.G611A p.R204H . . . XRCC6BP1 91419 broad.mit.edu 36 12 56631868 56631868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033276 exon4 c.G376A p.E126K . . . XRCC6BP1 91419 broad.mit.edu 36 12 56633680 56633680 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033276 exon5 c.G478T p.D160Y . . . LRIG3 121227 broad.mit.edu 36 12 57554321 57554321 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153377 exon18 c.G2898T p.K966N . . . LRIG3 121227 broad.mit.edu 36 12 57567843 57567843 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153377 exon8 c.G1086T p.K362N . . . LRIG3 121227 broad.mit.edu 36 12 57568494 57568494 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153377 exon7 c.G831T p.E277D . . . SLC16A7 9194 broad.mit.edu 36 12 58455516 58455516 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004731 exon4 c.T1173C p.P391P . . . SLC16A7 9194 broad.mit.edu 36 12 58459494 58459494 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004731 exon5 c.G1204T p.E402X . . . VWF 7450 broad.mit.edu 36 12 5955644 5955644 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000552 exon43 c.G7331T p.W2444L . . . VWF 7450 broad.mit.edu 36 12 5971400 5971400 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000552 exon38 c.G6644A p.G2215D . . . FAM19A2 338811 broad.mit.edu 36 12 60547453 60547453 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178539 exon2 c.G21T p.Q7H . . . USP15 9958 broad.mit.edu 36 12 61001599 61001599 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006313 exon5 c.T563G p.F188C . . . USP15 9958 broad.mit.edu 36 12 61076407 61076407 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006313 exon19 c.C2549T p.A850V . . . MON2 23041 broad.mit.edu 36 12 61173972 61173972 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015026 exon3 c.G186T p.E62D . . . MON2 23041 broad.mit.edu 36 12 61215702 61215702 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015026 exon14 c.C1846A p.H616N . . . MON2 23041 broad.mit.edu 36 12 61225010 61225010 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015026 exon21 c.A2532C p.K844N . . . AVPR1A 552 broad.mit.edu 36 12 61827489 61827489 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000706 exon2 c.C1174T p.R392X . . . SRGAP1 57522 broad.mit.edu 36 12 62771378 62771378 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020762 exon12 c.C1492T p.Q498X . . . TBK1 29110 broad.mit.edu 36 12 63140315 63140315 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013254 exon3 c.T167G p.F56C . . . TBK1 29110 broad.mit.edu 36 12 63177242 63177242 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013254 exon18 c.C1895T p.S632L . . . LEMD3 23592 broad.mit.edu 36 12 63850563 63850563 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014319 exon1 c.A920C p.E307A . . . LEMD3 23592 broad.mit.edu 36 12 63918559 63918559 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014319 exon5 c.C1706A p.P569H . . . NCAPD2 9918 broad.mit.edu 36 12 6502277 6502277 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014865 exon16 c.C1977A p.F659L . . . NOP2 4839 broad.mit.edu 36 12 6541139 6541139 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006170 exon11 c.C1147T p.R383W . . . CHD4 1108 broad.mit.edu 36 12 6579736 6579736 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001273 exon9 c.C1150A p.L384M . . . CAND1 55832 broad.mit.edu 36 12 65985187 65985187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018448 exon10 c.C1472T p.S491L . . . IFNG 3458 broad.mit.edu 36 12 66838104 66838104 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000619 exon3 c.C222A p.S74S . . . IL26 55801 broad.mit.edu 36 12 66905211 66905211 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018402 exon3 c.G348T p.Q116H . . . SLC35E3 55508 broad.mit.edu 36 12 67426529 67426529 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018656 exon1 c.T105G p.I35M . . . MDM2 4193 broad.mit.edu 36 12 67508924 67508924 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002392 exon8 c.G630T p.E210D . . . MDM2 4193 broad.mit.edu 36 12 67519772 67519772 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002392 exon11 c.T1370C p.V457A . . . CD4 920 broad.mit.edu 36 12 6779849 6779849 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000616 exon3 c.C165T p.N55N . . . CPSF6 11052 broad.mit.edu 36 12 67940133 67940133 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007007 exon8 c.C1358A p.S453Y . . . CD4 920 broad.mit.edu 36 12 6797903 6797903 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195016 exon6 c.C393T p.G131G . . . GNB3 2784 broad.mit.edu 36 12 6822851 6822851 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002075 exon7 c.T331G p.F111V . . . USP5 8078 broad.mit.edu 36 12 6842639 6842639 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003481 exon15 c.C1791T p.L597L . . . PTPRB 5787 broad.mit.edu 36 12 69276331 69276331 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002837 exon3 c.G369A p.T123T . . . ZFC3H1 196441 broad.mit.edu 36 12 70291890 70291890 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144982 exon32 c.A5672C p.K1891T . . . ZFC3H1 196441 broad.mit.edu 36 12 70312192 70312192 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144982 exon15 c.A3187G p.T1063A . . . TMEM19 55266 broad.mit.edu 36 12 70377543 70377543 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018279 exon4 c.C599A p.S200Y . . . TPH2 121278 broad.mit.edu 36 12 70711622 70711622 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173353 exon11 c.A1353C p.T451T . . . TRHDE 29953 broad.mit.edu 36 12 71243031 71243031 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013381 exon9 c.G1851T p.Q617H . . . TRHDE 29953 broad.mit.edu 36 12 71332389 71332389 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013381 exon16 c.A2561G p.D854G . . . PEX5 5830 broad.mit.edu 36 12 7253633 7253633 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001131024 exon14 c.G1537A p.E513K . . . ACSM4 341392 broad.mit.edu 36 12 7364611 7364611 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080454 exon6 c.G945A p.T315T . . . ACSM4 341392 broad.mit.edu 36 12 7367127 7367127 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080454 exon8 c.G1156T p.E386X . . . KCNC2 3747 broad.mit.edu 36 12 73887544 73887544 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139137 exon2 c.G487A p.E163K . . . CD163L1 283316 broad.mit.edu 36 12 7412032 7412032 + Silent SNP G T T rs1129724 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174941 exon17 c.C4101A p.I1367I . . . CD163L1 283316 broad.mit.edu 36 12 7419219 7419219 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174941 exon11 c.C2926T p.L976L . . . BBS10 79738 broad.mit.edu 36 12 75264329 75264329 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024685 exon2 c.C1567T p.L523L . . . CSRP2 1466 broad.mit.edu 36 12 75781139 75781139 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001321 exon3 c.G229A p.A77T . . . CSRP2 1466 broad.mit.edu 36 12 75784077 75784077 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001321 exon2 c.G95A p.R32H . . . E2F7 144455 broad.mit.edu 36 12 75945857 75945857 + Missense_Mutation SNP T G G rs34429867 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203394 exon11 c.A2077C p.K693Q . . . NAV3 89795 broad.mit.edu 36 12 76925004 76925004 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon8 c.A1555C p.S519R . . . APOBEC1 339 broad.mit.edu 36 12 7696307 7696307 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001644 exon3 c.G436A p.A146T . . . NAV3 89795 broad.mit.edu 36 12 77107961 77107961 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon33 c.G6056A p.R2019K . . . NAV3 89795 broad.mit.edu 36 12 77117304 77117304 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon36 c.C6511T p.R2171X . . . NAV3 89795 broad.mit.edu 36 12 77117386 77117386 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014903 exon36 c.C6593T p.T2198M . . . CLEC4C 170482 broad.mit.edu 36 12 7785384 7785384 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203503 exon3 c.T42G p.N14K . . . SLC2A14 144195 broad.mit.edu 36 12 7865118 7865118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153449 exon9 c.C1004T p.A335V . . . Unknown 0 broad.mit.edu 36 12 79140120 79140120 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173591 exon6 c.G426T p.K142N . . . Unknown 0 broad.mit.edu 36 12 79156874 79156874 + IGR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173591 exon9 c.A903C p.G301G . . . Unknown 0 broad.mit.edu 36 12 79238338 79238338 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173591 exon33 c.G3781T p.A1261S . . . Unknown 0 broad.mit.edu 36 12 79285597 79285597 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173591 exon53 c.G6430A p.G2144S . . . MYF5 4617 broad.mit.edu 36 12 79635030 79635030 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005593 exon1 c.C57T p.S19S . . . PPFIA2 8499 broad.mit.edu 36 12 80212770 80212770 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003625 exon24 c.C2900A p.P967H . . . PPFIA2 8499 broad.mit.edu 36 12 80302082 80302082 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003625 exon9 c.A835C p.K279Q . . . FOXJ2 55810 broad.mit.edu 36 12 8083770 8083770 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018416 exon2 c.G75T p.E25D . . . FAM90A1 55138 broad.mit.edu 36 12 8266432 8266432 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_018088 exon7 c.G648A p.R216R . . . SLC6A15 55117 broad.mit.edu 36 12 83791146 83791146 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182767 exon7 c.T960G p.F320L . . . SLC6A15 55117 broad.mit.edu 36 12 83809769 83809769 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018057 exon2 c.C262A p.P88T . . . LRRIQ1 84125 broad.mit.edu 36 12 83974343 83974343 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon8 c.G1641T p.E547D . . . LRRIQ1 84125 broad.mit.edu 36 12 83975064 83975064 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon8 c.C2362T p.R788X . . . LRRIQ1 84125 broad.mit.edu 36 12 84016794 84016794 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon13 c.C3100A p.L1034I . . . LRRIQ1 84125 broad.mit.edu 36 12 84021926 84021926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032165 exon14 c.G3223A p.V1075I . . . LRRIQ1 84125 broad.mit.edu 36 12 84042114 84042114 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032165 exon17 c.G3693A p.Q1231Q . . . MGAT4C 25834 broad.mit.edu 36 12 84897952 84897953 + Nonsense_Mutation DNP CG TA TA novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013244 exon7 c.682_683TA . . . NA AICDA 57379 broad.mit.edu 36 12 8648675 8648675 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020661 exon4 c.C538A p.L180I . . . MFAP5 8076 broad.mit.edu 36 12 8692018 8692018 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003480 exon10 c.G458A p.R153H . . . MFAP5 8076 broad.mit.edu 36 12 8694408 8694408 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003480 exon8 c.C292A p.H98N . . . CEP290 80184 broad.mit.edu 36 12 87011736 87011736 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025114 exon28 c.G3251A p.R1084Q . . . MFAP5 8076 broad.mit.edu 36 12 8704726 8704726 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003480 exon3 c.G94T p.D32Y . . . CEP290 80184 broad.mit.edu 36 12 87057460 87057460 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025114 exon4 c.G193T p.E65X . . . WNK1 65125 broad.mit.edu 36 12 876959 876959 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213655 exon25 c.C7055A p.S2352Y . . . ATP2B1 490 broad.mit.edu 36 12 88539498 88539498 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001323 exon9 c.A1546G p.T516A . . . ATP2B1 490 broad.mit.edu 36 12 88560104 88560104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001323 exon2 c.G368A p.G123D . . . A2ML1 144568 broad.mit.edu 36 12 8867222 8867222 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144670 exon2 c.C240A p.S80S . . . A2ML1 144568 broad.mit.edu 36 12 8880125 8880125 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144670 exon7 c.G651A p.P217P . . . A2ML1 144568 broad.mit.edu 36 12 8896135 8896135 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144670 exon20 c.C2526A p.T842T . . . A2ML1 144568 broad.mit.edu 36 12 8912193 8912193 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144670 exon31 c.G4034A p.R1345Q . . . LUM 4060 broad.mit.edu 36 12 90026371 90026371 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002345 exon2 c.G517T p.E173X . . . DCN 1634 broad.mit.edu 36 12 90069569 90069569 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001920 exon7 c.A878G p.Y293C . . . A2M 2 broad.mit.edu 36 12 9150123 9150123 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000014 exon10 c.A1080G p.R360R . . . EEA1 8411 broad.mit.edu 36 12 91695557 91695557 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003566 exon27 c.G3907T p.E1303X . . . EEA1 8411 broad.mit.edu 36 12 91726956 91726956 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003566 exon18 c.A2307C p.E769D . . . EEA1 8411 broad.mit.edu 36 12 91770199 91770199 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003566 exon8 c.A525G p.I175M . . . PZP 5858 broad.mit.edu 36 12 9209151 9209151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002864 exon19 c.G2338A p.E780K . . . PZP 5858 broad.mit.edu 36 12 9240546 9240546 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002864 exon9 c.T870C p.L290L . . . PZP 5858 broad.mit.edu 36 12 9244807 9244807 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002864 exon6 c.A618G p.V206V . . . PLXNC1 10154 broad.mit.edu 36 12 93165812 93165812 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005761 exon13 c.C2391A p.V797V . . . CCDC41 51134 broad.mit.edu 36 12 93226741 93226741 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042399 exon16 c.A2085G p.E695E . . . USP44 84101 broad.mit.edu 36 12 94451617 94451617 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042403 exon2 c.A547C p.K183Q . . . NTN4 59277 broad.mit.edu 36 12 94705258 94705258 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021229 exon2 c.G175A p.E59K . . . CCDC38 120935 broad.mit.edu 36 12 94797698 94797698 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182496 exon12 c.G997T p.A333S . . . AMDHD1 144193 broad.mit.edu 36 12 94880284 94880284 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152435 exon6 c.G834A p.A278A . . . HAL 3034 broad.mit.edu 36 12 94894582 94894582 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002108 exon19 c.G1688A p.G563D . . . CDK17 5128 broad.mit.edu 36 12 95241879 95241879 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002595 exon3 c.G261T p.M87I . . . NEDD1 121441 broad.mit.edu 36 12 95869385 95869385 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152905 exon15 c.T1856G p.I619S . . . TMPO 7112 broad.mit.edu 36 12 97455449 97455449 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032283 exon4 c.A631G p.T211A . . . TMPO 7112 broad.mit.edu 36 12 97465713 97465713 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032283 exon9 c.C1311T p.N437N . . . APAF1 317 broad.mit.edu 36 12 97580450 97580450 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013229 exon6 c.G763T p.D255Y . . . APAF1 317 broad.mit.edu 36 12 97584205 97584205 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013229 exon9 c.G1268A p.R423H . . . ANKS1B 56899 broad.mit.edu 36 12 98164735 98164735 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152788 exon13 c.G1795T p.E599X . . . FAM71C 196472 broad.mit.edu 36 12 98566589 98566589 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153364 exon1 c.T506G p.L169R . . . ANKS1B 56899 broad.mit.edu 36 12 98690873 98690873 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152788 exon8 c.G1086T p.K362N . . . KLRF1 51348 broad.mit.edu 36 12 9888287 9888287 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016523 exon6 c.C594A p.F198L . . . DEPDC4 120863 broad.mit.edu 36 12 99180253 99180253 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152317 exon3 c.T620G p.L207R . . . NR1H4 9971 broad.mit.edu 36 12 99481351 99481351 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005123 exon11 c.G1372T p.D458Y . . . MYBPC1 4604 broad.mit.edu 36 12 100547342 100547342 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CLEC1A 51267 broad.mit.edu 36 12 10119365 10119365 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . STAB2 55576 broad.mit.edu 36 12 102566735 102566735 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KLRC1 3821 broad.mit.edu 36 12 10490408 10490408 + 3'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BTBD11 121551 broad.mit.edu 36 12 106560087 106560087 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ACACB 32 broad.mit.edu 36 12 108182256 108182256 + Intron SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYO1H 283446 broad.mit.edu 36 12 108364470 108364470 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NOS1 4842 broad.mit.edu 36 12 116148965 116148965 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HPD 3242 broad.mit.edu 36 12 120776984 120776984 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CLIP1 6249 broad.mit.edu 36 12 121378437 121378437 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TMEM132D 121256 broad.mit.edu 36 12 128750301 128750301 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RIMBP2 23504 broad.mit.edu 36 12 129501847 129501847 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GRIN2B 2904 broad.mit.edu 36 12 13719934 13719934 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SOX5 6660 broad.mit.edu 36 12 23619854 23619854 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SOX5 6660 broad.mit.edu 36 12 24256613 24256613 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C12orf67 144360 broad.mit.edu 36 12 24628156 24628156 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARNTL2 56938 broad.mit.edu 36 12 27444723 27444723 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAR2 55711 broad.mit.edu 36 12 29337680 29337680 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 12 31159114 31159114 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 12 31180342 31180342 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CPNE8 144402 broad.mit.edu 36 12 37410344 37410344 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIF21A 55605 broad.mit.edu 36 12 38050337 38050337 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LRRK2 120892 broad.mit.edu 36 12 39043632 39043632 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CNTN1 1272 broad.mit.edu 36 12 39604732 39604732 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PPHLN1 51535 broad.mit.edu 36 12 40997973 40997973 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PLEKHA9 51054 broad.mit.edu 36 12 43853915 43853915 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC48A1 55652 broad.mit.edu 36 12 46460617 46460617 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T C Unknown Valid Germline Phase_I Capture Illumina Illumina HiSeq . . . . . . . CACNB3 784 broad.mit.edu 36 12 47503860 47503860 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RHEBL1 121268 broad.mit.edu 36 12 47747093 47747093 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCN8A 6334 broad.mit.edu 36 12 50469323 50469323 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KRT5 3852 broad.mit.edu 36 12 51197290 51197290 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPR84 53831 broad.mit.edu 36 12 53042709 53042709 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OR10A7 121364 broad.mit.edu 36 12 53901073 53901073 + 5'Flank SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ITGA7 3679 broad.mit.edu 36 12 54375698 54375698 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OBFC2B 79035 broad.mit.edu 36 12 54905758 54905758 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MARS 4141 broad.mit.edu 36 12 56193020 56193020 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . USP15 9958 broad.mit.edu 36 12 60974365 60974365 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IRAK3 11213 broad.mit.edu 36 12 64925319 64925319 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CAND1 55832 broad.mit.edu 36 12 65972834 65972834 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NUP107 57122 broad.mit.edu 36 12 67413663 67413663 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LRRC23 10233 broad.mit.edu 36 12 6886734 6886734 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PTPRR 5801 broad.mit.edu 36 12 69444837 69444837 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZFC3H1 196441 broad.mit.edu 36 12 70318574 70318574 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PEX5 5830 broad.mit.edu 36 12 7246471 7246471 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OSBPL8 114882 broad.mit.edu 36 12 75274647 75274647 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZDHHC17 23390 broad.mit.edu 36 12 75760823 75760823 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . E2F7 144455 broad.mit.edu 36 12 75951767 75951767 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NAV3 89795 broad.mit.edu 36 12 77039839 77039839 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PPP1R12A 4659 broad.mit.edu 36 12 78711849 78711849 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 12 79172428 79172428 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PPFIA2 8499 broad.mit.edu 36 12 80179959 80179959 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PPFIA2 8499 broad.mit.edu 36 12 80357966 80357966 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SLC6A15 55117 broad.mit.edu 36 12 83791246 83791246 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC6A15 55117 broad.mit.edu 36 12 83794518 83794518 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LRRIQ1 84125 broad.mit.edu 36 12 84071056 84071056 + Splice_Site SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PHC1 1911 broad.mit.edu 36 12 8963734 8963734 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EEA1 8411 broad.mit.edu 36 12 91771821 91771821 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PZP 5858 broad.mit.edu 36 12 9201219 9201219 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PLXNC1 10154 broad.mit.edu 36 12 93127623 93127623 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CCDC38 120935 broad.mit.edu 36 12 94816381 94816381 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDK17 5128 broad.mit.edu 36 12 95231364 95231364 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NEDD1 121441 broad.mit.edu 36 12 95858310 95858310 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MIR135A2 406926 broad.mit.edu 36 12 96481801 96481801 + RNA SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANKS1B 56899 broad.mit.edu 36 12 97663641 97663641 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UHRF1BP1L 23074 broad.mit.edu 36 12 99007016 99007016 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCYL2 55681 broad.mit.edu 36 12 99209401 99209401 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GAS6 2621 broad.mit.edu 36 13 113564412 113564413 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000820 exon4 c.312_313insA p.T104fs . . . FREM2 341640 broad.mit.edu 36 13 38162943 38162944 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - G - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207361 exon1 c.3462_3463insG p.K1154fs . . . NALCN 259232 broad.mit.edu 36 13 100512453 100512453 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052867 exon41 c.C4623T p.S1541S . . . NALCN 259232 broad.mit.edu 36 13 100560993 100560993 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052867 exon20 c.C2342A p.S781Y . . . NALCN 259232 broad.mit.edu 36 13 100795706 100795706 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052867 exon7 c.C711T p.Y237Y . . . TPP2 7174 broad.mit.edu 36 13 102087540 102087540 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003291 exon14 c.A1786C p.N596H . . . TPP2 7174 broad.mit.edu 36 13 102107489 102107489 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003291 exon24 c.A3035C p.E1012A . . . KDELC1 79070 broad.mit.edu 36 13 102238229 102238229 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024089 exon8 c.C1339A p.L447I . . . DAOA 267012 broad.mit.edu 36 13 104922928 104922928 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172370 exon3 c.A174C p.K58N . . . DAOA 267012 broad.mit.edu 36 13 104940253 104940253 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161814 exon5 c.T71G p.L24R . . . DAOA 267012 broad.mit.edu 36 13 104940412 104940412 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161814 exon5 c.C230A p.T77N . . . FAM155A 728215 broad.mit.edu 36 13 107316584 107316584 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080396 exon1 c.G362T p.R121I . . . LIG4 3981 broad.mit.edu 36 13 107659207 107659207 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002312 exon2 c.C2411T p.S804F . . . LIG4 3981 broad.mit.edu 36 13 107661038 107661038 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002312 exon2 c.T580G p.L194V . . . LIG4 3981 broad.mit.edu 36 13 107661125 107661125 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002312 exon2 c.G493T p.D165Y . . . MYO16 23026 broad.mit.edu 36 13 108116377 108116377 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198950 exon2 c.G171T p.E57D . . . MYO16 23026 broad.mit.edu 36 13 108360397 108360397 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198950 exon16 c.A1823T p.Q608L . . . COL4A1 1282 broad.mit.edu 36 13 109625690 109625690 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001845 exon37 c.A3074T p.K1025I . . . ING1 3621 broad.mit.edu 36 13 110169945 110169945 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005537 exon2 c.G934A p.D312N . . . C13orf28 122258 broad.mit.edu 36 13 112095353 112095353 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145248 exon2 c.C112T p.P38S . . . TUBGCP3 10426 broad.mit.edu 36 13 112191919 112191919 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006322 exon21 c.C2542T p.R848X . . . CUL4A 8451 broad.mit.edu 36 13 112945295 112945295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008895 exon11 c.G1048A p.A350T . . . GRTP1 79774 broad.mit.edu 36 13 113047224 113047224 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024719 exon5 c.G517T p.E173X . . . TFDP1 7027 broad.mit.edu 36 13 113334039 113334039 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007111 exon5 c.A287C p.D96A . . . FAM70B 348013 broad.mit.edu 36 13 113611606 113611606 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182614 exon5 c.G368T p.R123I . . . TUBA3C 7278 broad.mit.edu 36 13 18651677 18651677 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006001 exon2 c.G30A p.G10G . . . TPTE2 93492 broad.mit.edu 36 13 18965596 18965596 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001141968 exon4 c.G57A p.A19A . . . PSPC1 55269 broad.mit.edu 36 13 19202418 19202418 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042414 exon6 c.G1119A p.R373R . . . ZMYM5 9205 broad.mit.edu 36 13 19296911 19296911 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142684 exon8 c.A1716G p.E572E . . . N6AMT2 221143 broad.mit.edu 36 13 20201263 20201263 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174928 exon5 c.C601T p.R201C . . . XPO4 64328 broad.mit.edu 36 13 20268919 20268919 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022459 exon17 c.T2600C p.I867T . . . XPO4 64328 broad.mit.edu 36 13 20281304 20281304 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022459 exon11 c.C1411T p.R471X . . . LATS2 26524 broad.mit.edu 36 13 20447231 20447231 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014572 exon8 c.C3045T p.S1015S . . . EFHA1 221154 broad.mit.edu 36 13 21011511 21011511 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152726 exon4 c.C396T p.I132I . . . SACS 26278 broad.mit.edu 36 13 22802641 22802641 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.C13374A p.F4458L . . . SACS 26278 broad.mit.edu 36 13 22804239 22804239 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G11776A p.D3926N . . . SACS 26278 broad.mit.edu 36 13 22805689 22805689 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G10326T p.E3442D . . . SACS 26278 broad.mit.edu 36 13 22808661 22808661 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.T7354G p.L2452V . . . SACS 26278 broad.mit.edu 36 13 22810323 22810323 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon10 c.G5692T p.E1898X . . . SACS 26278 broad.mit.edu 36 13 22827431 22827431 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014363 exon8 c.C1320A p.F440L . . . PARP4 143 broad.mit.edu 36 13 23907293 23907293 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006437 exon31 c.C3986T p.P1329L . . . PARP4 143 broad.mit.edu 36 13 23914101 23914101 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006437 exon30 c.G3549T p.E1183D . . . PARP4 143 broad.mit.edu 36 13 23973835 23973835 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006437 exon3 c.G270T p.K90N . . . ATP12A 479 broad.mit.edu 36 13 24163365 24163365 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001185085 exon8 c.G1063A p.E355K . . . ATP12A 479 broad.mit.edu 36 13 24179302 24179302 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185085 exon16 c.G2329A p.A777T . . . RNF17 56163 broad.mit.edu 36 13 24346298 24346298 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184993 exon33 c.G4482A p.A1494A . . . CENPJ 55835 broad.mit.edu 36 13 24384888 24384888 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018451 exon2 c.A276C p.K92N . . . CENPJ 55835 broad.mit.edu 36 13 24385030 24385030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018451 exon2 c.G134A p.R45Q . . . PABPC3 5042 broad.mit.edu 36 13 24569766 24569766 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030979 exon1 c.C1430T p.A477V . . . PABPC3 5042 broad.mit.edu 36 13 24569920 24569920 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030979 exon1 c.A1584G p.Q528Q . . . NUPL1 9818 broad.mit.edu 36 13 24781390 24781390 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014089 exon3 c.G256A p.A86T . . . ATP8A2 51761 broad.mit.edu 36 13 25027135 25027135 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016529 exon13 c.G1192A p.D398N . . . ATP8A2 51761 broad.mit.edu 36 13 25052071 25052071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016529 exon22 c.G1993A p.E665K . . . ATP8A2 51761 broad.mit.edu 36 13 25440790 25440790 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016529 exon35 c.C3350T p.A1117V . . . RNF6 6049 broad.mit.edu 36 13 25686658 25686658 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183044 exon5 c.G1361A p.R454Q . . . RNF6 6049 broad.mit.edu 36 13 25687159 25687159 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183044 exon5 c.G860T p.S287I . . . RNF6 6049 broad.mit.edu 36 13 25690691 25690691 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183044 exon4 c.A246C p.Q82H . . . GPR12 2835 broad.mit.edu 36 13 26231399 26231399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005288 exon2 c.G566A p.S189N . . . USP12 219333 broad.mit.edu 36 13 26543234 26543234 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182488 exon8 c.T985G p.L329V . . . GTF3A 2971 broad.mit.edu 36 13 26907314 26907314 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002097 exon8 c.G918T p.K306N . . . MTIF3 219402 broad.mit.edu 36 13 26912364 26912364 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152912 exon3 c.T222G p.A74A . . . FLT3 2322 broad.mit.edu 36 13 27487364 27487364 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004119 exon22 c.G2683T p.D895Y . . . FLT3 2322 broad.mit.edu 36 13 27521778 27521778 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004119 exon7 c.C876T p.L292L . . . FLT1 2321 broad.mit.edu 36 13 27775352 27775352 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002019 exon30 c.G3969A p.P1323P . . . FLT1 2321 broad.mit.edu 36 13 27939216 27939216 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002019 exon3 c.G212T p.S71I . . . SLC46A3 283537 broad.mit.edu 36 13 28185578 28185578 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181785 exon3 c.G299A p.R100Q . . . SLC46A3 283537 broad.mit.edu 36 13 28190092 28190092 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181785 exon2 c.T44C p.F15S . . . MTUS2 23281 broad.mit.edu 36 13 28496903 28496903 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033602 exon1 c.G98T p.R33I . . . MTUS2 23281 broad.mit.edu 36 13 28497705 28497705 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033602 exon1 c.G900A p.S300S . . . SLC7A1 6541 broad.mit.edu 36 13 28995582 28995582 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003045 exon7 c.C870T p.I290I . . . HMGB1 3146 broad.mit.edu 36 13 29934703 29934703 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002128 exon4 c.C443G p.A148G . . . USPL1 10208 broad.mit.edu 36 13 30130879 30130879 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005800 exon9 c.C2665T p.R889C . . . ALOX5AP 241 broad.mit.edu 36 13 30216201 30216201 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001629 exon2 c.C75A p.F25L . . . C13orf33 84935 broad.mit.edu 36 13 30393721 30393721 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032849 exon4 c.G525T p.K175N . . . HSPH1 10808 broad.mit.edu 36 13 30609477 30609477 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006644 exon18 c.C2555A p.S852Y . . . B3GALTL 145173 broad.mit.edu 36 13 30720011 30720011 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194318 exon6 c.A367G p.R123G . . . RXFP2 122042 broad.mit.edu 36 13 31263953 31263953 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166058 exon14 c.A1084C p.N362H . . . FRY 10129 broad.mit.edu 36 13 31633306 31633306 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon17 c.C1810A p.L604I . . . FRY 10129 broad.mit.edu 36 13 31700787 31700787 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon40 c.A5401G p.T1801A . . . FRY 10129 broad.mit.edu 36 13 31709933 31709933 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon44 c.C6228T p.L2076L . . . FRY 10129 broad.mit.edu 36 13 31711456 31711456 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon45 c.C6486A p.F2162L . . . FRY 10129 broad.mit.edu 36 13 31733944 31733944 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon52 c.C7608A p.H2536Q . . . FRY 10129 broad.mit.edu 36 13 31734532 31734532 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023037 exon53 c.C7699A p.H2567N . . . BRCA2 675 broad.mit.edu 36 13 31805050 31805050 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon10 c.G1435T p.D479Y . . . BRCA2 675 broad.mit.edu 36 13 31810067 31810067 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon11 c.T3575G p.F1192C . . . BRCA2 675 broad.mit.edu 36 13 31851924 31851924 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon23 c.T8991G p.Y2997X . . . BRCA2 675 broad.mit.edu 36 13 31870606 31870606 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000059 exon27 c.C9956A p.S3319Y . . . N4BP2L1 90634 broad.mit.edu 36 13 31876488 31876488 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052818 exon4 c.G443A p.R148H . . . N4BP2L2 10443 broad.mit.edu 36 13 31914916 31914916 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033111 exon7 c.C1758A p.C586X . . . N4BP2L2 10443 broad.mit.edu 36 13 31915245 31915245 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033111 exon7 c.A1429G p.N477D . . . N4BP2L2 10443 broad.mit.edu 36 13 32008158 32008158 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014887 exon2 c.A1007C p.E336A . . . NBEA 26960 broad.mit.edu 36 13 34513082 34513082 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon2 c.G307T p.E103X . . . NBEA 26960 broad.mit.edu 36 13 34570435 34570435 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon11 c.G1573A p.A525T . . . NBEA 26960 broad.mit.edu 36 13 34631384 34631384 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015678 exon22 c.G3076T p.D1026Y . . . DCLK1 9201 broad.mit.edu 36 13 35294921 35294921 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195416 exon7 c.A578G p.K193R . . . SOHLH2 54937 broad.mit.edu 36 13 35642763 35642763 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017826 exon10 c.C1162A p.H388N . . . C13orf36 400120 broad.mit.edu 36 13 36167536 36167536 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203451 exon2 c.C321A p.S107S . . . CSNK1A1L 122011 broad.mit.edu 36 13 36576626 36576626 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145203 exon1 c.C768T p.F256F . . . CSNK1A1L 122011 broad.mit.edu 36 13 36576924 36576924 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145203 exon1 c.A470G p.D157G . . . CSNK1A1L 122011 broad.mit.edu 36 13 36577040 36577040 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145203 exon1 c.C354T p.D118D . . . CSNK1A1L 122011 broad.mit.edu 36 13 36577379 36577379 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145203 exon1 c.C15T p.S5S . . . TRPC4 7223 broad.mit.edu 36 13 37127288 37127288 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135957 exon7 c.C1821A p.I607I . . . TRPC4 7223 broad.mit.edu 36 13 37135775 37135775 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135957 exon6 c.C1466A p.S489Y . . . TRPC4 7223 broad.mit.edu 36 13 37164442 37164442 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135957 exon4 c.C928A p.L310M . . . FREM2 341640 broad.mit.edu 36 13 38163305 38163305 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207361 exon1 c.A3824G p.D1275G . . . FREM2 341640 broad.mit.edu 36 13 38348512 38348512 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207361 exon20 c.T8537C p.F2846S . . . C13orf23 80209 broad.mit.edu 36 13 38485130 38485130 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025138 exon11 c.T2259A p.A753A . . . C13orf23 80209 broad.mit.edu 36 13 38485469 38485469 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025138 exon11 c.C1920T p.G640G . . . C13orf23 80209 broad.mit.edu 36 13 38498481 38498481 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025138 exon6 c.C413T p.S138F . . . NHLRC3 387921 broad.mit.edu 36 13 38514246 38514246 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012754 exon4 c.C390A p.F130L . . . KBTBD6 89890 broad.mit.edu 36 13 40602969 40602969 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152903 exon1 c.G1679T p.R560I . . . KBTBD6 89890 broad.mit.edu 36 13 40603387 40603387 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152903 exon1 c.C1261T p.R421C . . . KBTBD6 89890 broad.mit.edu 36 13 40604511 40604511 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152903 exon1 c.C137A p.S46Y . . . NAA16 79612 broad.mit.edu 36 13 40830600 40830600 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024561 exon11 c.A1248C p.K416N . . . NAA16 79612 broad.mit.edu 36 13 40839605 40839605 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024561 exon14 c.G1570A p.D524N . . . KIAA0564 23078 broad.mit.edu 36 13 41087137 41087137 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015058 exon38 c.C4695T p.G1565G . . . KIAA0564 23078 broad.mit.edu 36 13 41173627 41173627 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015058 exon28 c.A3265C p.R1089R . . . KIAA0564 23078 broad.mit.edu 36 13 41199426 41199426 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015058 exon24 c.G2662A p.E888K . . . AKAP11 11215 broad.mit.edu 36 13 41775824 41775824 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016248 exon8 c.G4942A p.A1648T . . . C13orf31 144811 broad.mit.edu 36 13 43362275 43362275 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128303 exon6 c.C1159T p.L387F . . . TSC22D1 8848 broad.mit.edu 36 13 43908694 43908694 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006022 exon1 c.C71A p.S24Y . . . TSC22D1 8848 broad.mit.edu 36 13 44046234 44046234 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183422 exon1 c.G1977T p.Q659H . . . NUFIP1 26747 broad.mit.edu 36 13 44413420 44413420 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012345 exon10 c.T1409G p.I470S . . . SLC25A30 253512 broad.mit.edu 36 13 44871114 44871114 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010875 exon8 c.A714G p.R238R . . . ZC3H13 23091 broad.mit.edu 36 13 45439928 45439928 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015070 exon15 c.C4033T p.R1345X . . . CPB2 1361 broad.mit.edu 36 13 45527918 45527918 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016413 exon9 c.G956A p.G319D . . . C13orf18 80183 broad.mit.edu 36 13 45840870 45840870 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025113 exon4 c.A617T p.K206M . . . LRCH1 23143 broad.mit.edu 36 13 46171478 46171478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164211 exon10 c.G1252A p.A418T . . . HTR2A 3356 broad.mit.edu 36 13 46307305 46307305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165947 exon3 c.C832T p.L278F . . . MED4 29079 broad.mit.edu 36 13 47558589 47558589 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014166 exon3 c.G193A p.V65I . . . RB1 5925 broad.mit.edu 36 13 47779474 47779474 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000321 exon2 c.G195T p.K65N . . . RB1 5925 broad.mit.edu 36 13 47814844 47814844 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000321 exon3 c.G373T p.E125X . . . RB1 5925 broad.mit.edu 36 13 47835071 47835071 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000321 exon8 c.G838T p.E280X . . . RCBTB2 1102 broad.mit.edu 36 13 47987772 47987772 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001268 exon5 c.T149C p.V50A . . . CAB39L 81617 broad.mit.edu 36 13 48811862 48811862 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079670 exon9 c.G642T p.E214D . . . SERPINE3 647174 broad.mit.edu 36 13 50816402 50816402 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101320 exon2 c.A270T p.K90N . . . INTS6 26512 broad.mit.edu 36 13 50846482 50846482 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012141 exon15 c.G1967T p.R656I . . . WDFY2 115825 broad.mit.edu 36 13 51230420 51230420 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052950 exon11 c.A1156G p.T386A . . . DHRS12 79758 broad.mit.edu 36 13 51271794 51271794 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024705 exon2 c.G3A p.M1I . . . ATP7B 540 broad.mit.edu 36 13 51406984 51406984 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000053 exon21 c.A4307G p.D1436G . . . UTP14C 9724 broad.mit.edu 36 13 51496490 51496490 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004127 exon3 c.C623A p.S208Y . . . UTP14C 9724 broad.mit.edu 36 13 51496793 51496793 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004127 exon3 c.T926G p.F309C . . . UTP14C 9724 broad.mit.edu 36 13 51497067 51497067 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004127 exon3 c.T1200C p.F400F . . . UTP14C 9724 broad.mit.edu 36 13 51502527 51502527 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021645 exon2 c.C1586A p.P529H . . . NEK5 341676 broad.mit.edu 36 13 51565337 51565337 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199289 exon13 c.C1062T p.V354V . . . NEK3 4752 broad.mit.edu 36 13 51605354 51605354 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146099 exon15 c.G1395T p.E465D . . . HNRNPA1L2 144983 broad.mit.edu 36 13 52115403 52115403 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001011725 exon6 c.A775C p.S259R . . . PCDH17 27253 broad.mit.edu 36 13 57106210 57106210 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040429 exon1 c.C1529A p.S510Y . . . PCDH17 27253 broad.mit.edu 36 13 57106222 57106222 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040429 exon1 c.C1541T p.S514L . . . PCDH17 27253 broad.mit.edu 36 13 57196835 57196835 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040429 exon4 c.T2886G p.N962K . . . DIAPH3 81624 broad.mit.edu 36 13 59311507 59311507 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030932 exon17 c.C2025A p.T675T . . . TDRD3 81550 broad.mit.edu 36 13 60000984 60000984 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030794 exon11 c.A1345C p.I449L . . . PCDH20 64881 broad.mit.edu 36 13 60883984 60883984 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022843 exon2 c.C2249A p.S750Y . . . PCDH20 64881 broad.mit.edu 36 13 60885704 60885704 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022843 exon2 c.C529A p.L177I . . . PCDH9 5101 broad.mit.edu 36 13 66103378 66103378 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020403 exon3 c.G3203T p.R1068M . . . PCDH9 5101 broad.mit.edu 36 13 66698977 66698977 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020403 exon2 c.G1597T p.E533X . . . PCDH9 5101 broad.mit.edu 36 13 66699620 66699620 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020403 exon2 c.A954C p.L318F . . . KLHL1 57626 broad.mit.edu 36 13 69191684 69191684 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020866 exon9 c.T1833A p.S611R . . . KLHL1 57626 broad.mit.edu 36 13 69269057 69269057 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020866 exon7 c.C1453T p.L485L . . . KLHL1 57626 broad.mit.edu 36 13 69354526 69354526 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020866 exon5 c.G1117T p.E373X . . . KLHL1 57626 broad.mit.edu 36 13 69579805 69579805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020866 exon1 c.G28A p.D10N . . . TBC1D4 9882 broad.mit.edu 36 13 74764317 74764317 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014832 exon19 c.C3408A p.S1136R . . . LMO7 4008 broad.mit.edu 36 13 75093836 75093836 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005358 exon1 c.G6T p.K2N . . . LMO7 4008 broad.mit.edu 36 13 75314069 75314069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015842 exon21 c.G3281A p.R1094H . . . FBXL3 26224 broad.mit.edu 36 13 76479819 76479819 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012158 exon5 c.T749C p.V250A . . . SCEL 8796 broad.mit.edu 36 13 77028741 77028741 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144777 exon3 c.G53T p.S18I . . . EDNRB 1910 broad.mit.edu 36 13 77372103 77372103 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122659 exon6 c.C1086A p.S362R . . . EDNRB 1910 broad.mit.edu 36 13 77375336 77375336 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122659 exon3 c.C757T p.R253X . . . RNF219 79596 broad.mit.edu 36 13 78088283 78088283 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024546 exon6 c.C1614A p.I538I . . . RBM26 64062 broad.mit.edu 36 13 78792758 78792758 + Nonstop_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022118 exon21 c.G2942T p.X981L . . . SLITRK1 114798 broad.mit.edu 36 13 83352778 83352778 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052910 exon1 c.C866A p.P289H . . . SLITRK1 114798 broad.mit.edu 36 13 83352884 83352884 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052910 exon1 c.G760T p.E254X . . . SLITRK6 84189 broad.mit.edu 36 13 85266412 85266412 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032229 exon2 c.G2233T p.E745X . . . SLITRK6 84189 broad.mit.edu 36 13 85268077 85268077 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032229 exon2 c.C568A p.L190I . . . DCT 1638 broad.mit.edu 36 13 93893842 93893842 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001922 exon7 c.T1230G p.F410L . . . DCT 1638 broad.mit.edu 36 13 93912331 93912331 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001922 exon5 c.G977A p.R326Q . . . ABCC4 10257 broad.mit.edu 36 13 94684894 94684894 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105515 exon4 c.G502A p.V168I . . . DZIP1 22873 broad.mit.edu 36 13 95039419 95039419 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon18 c.T1960C p.S654P . . . DZIP1 22873 broad.mit.edu 36 13 95040593 95040593 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon16 c.G1727A p.R576Q . . . DZIP1 22873 broad.mit.edu 36 13 95075117 95075117 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon8 c.A878G p.E293G . . . DZIP1 22873 broad.mit.edu 36 13 95080339 95080339 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014934 exon7 c.C715T p.L239F . . . DNAJC3 5611 broad.mit.edu 36 13 95210329 95210329 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006260 exon6 c.G581A p.R194Q . . . UGGT2 55757 broad.mit.edu 36 13 95463581 95463581 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020121 exon5 c.T641C p.V214A . . . FARP1 10160 broad.mit.edu 36 13 97663618 97663618 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005766 exon2 c.T121C p.S41P . . . FARP1 10160 broad.mit.edu 36 13 97694950 97694950 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001715 exon3 c.C376A p.L126I . . . STK24 8428 broad.mit.edu 36 13 97925565 97925565 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003576 exon4 c.G415T p.E139X . . . GPR183 1880 broad.mit.edu 36 13 98745643 98745643 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004951 exon2 c.T758A p.F253Y . . . ZIC2 7546 broad.mit.edu 36 13 99433373 99433373 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007129 exon1 c.A1054G p.I352V . . . NALCN 259232 broad.mit.edu 36 13 100631437 100631437 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . COL4A2 1284 broad.mit.edu 36 13 109878804 109878804 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ANKRD10 55608 broad.mit.edu 36 13 110356371 110356371 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMCO3 55002 broad.mit.edu 36 13 113212547 113212547 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EFHA1 221154 broad.mit.edu 36 13 20993373 20993373 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RXFP2 122042 broad.mit.edu 36 13 31264806 31264806 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PDS5B 23047 broad.mit.edu 36 13 32166450 32166450 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NBEA 26960 broad.mit.edu 36 13 34654666 34654666 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CCNA1 8900 broad.mit.edu 36 13 35909759 35909759 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRPC4 7223 broad.mit.edu 36 13 37111384 37111384 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FREM2 341640 broad.mit.edu 36 13 38328404 38328404 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SLC25A15 10166 broad.mit.edu 36 13 40280739 40280739 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TNFSF11 8600 broad.mit.edu 36 13 42073018 42073018 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PHF11 51131 broad.mit.edu 36 13 48993022 48993022 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . INTS6 26512 broad.mit.edu 36 13 50837886 50837886 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP7B 540 broad.mit.edu 36 13 51447312 51447312 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TBC1D4 9882 broad.mit.edu 36 13 74764420 74764420 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DCT 1638 broad.mit.edu 36 13 93910335 93910335 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DZIP1 22873 broad.mit.edu 36 13 95040703 95040703 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TM9SF2 9375 broad.mit.edu 36 13 99012937 99012937 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MIR127 406914 broad.mit.edu 36 14 100418072 100418072 + 5'Flank SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134888 exon1 c.G2807A p.R936H . . . DYNC1H1 1778 broad.mit.edu 36 14 101553246 101553246 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001376 exon39 c.C7917T p.C2639C . . . HSP90AA1 3320 broad.mit.edu 36 14 101619979 101619979 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005348 exon7 c.G1242T p.K414N . . . RAGE 5891 broad.mit.edu 36 14 101768680 101768680 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014226 exon9 c.G811A p.D271N . . . CINP 51550 broad.mit.edu 36 14 101895530 101895530 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177612 exon2 c.C155T p.A52V . . . TECPR2 9895 broad.mit.edu 36 14 101970744 101970744 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014844 exon9 c.T1837G p.L613V . . . TECPR2 9895 broad.mit.edu 36 14 101974207 101974207 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014844 exon10 c.C2490T p.G830G . . . MARK3 4140 broad.mit.edu 36 14 103001759 103001759 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128919 exon8 c.A653G p.Y218C . . . PPP1R13B 23368 broad.mit.edu 36 14 103285998 103285998 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015316 exon8 c.A855C p.Q285H . . . PPP1R13B 23368 broad.mit.edu 36 14 103314887 103314887 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015316 exon4 c.G302A p.R101Q . . . TDRD9 122402 broad.mit.edu 36 14 103550850 103550850 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153046 exon21 c.C2142A p.I714I . . . AHNAK2 113146 broad.mit.edu 36 14 104481435 104481435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.G11398T p.D3800Y . . . AHNAK2 113146 broad.mit.edu 36 14 104482182 104482182 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.G10651A p.G3551S . . . AHNAK2 113146 broad.mit.edu 36 14 104486497 104486497 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.C6336T p.V2112V . . . AHNAK2 113146 broad.mit.edu 36 14 104486812 104486812 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.C6021T p.I2007I . . . AHNAK2 113146 broad.mit.edu 36 14 104489746 104489746 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138420 exon7 c.G3087T p.E1029D . . . POTEG 404785 broad.mit.edu 36 14 18633489 18633489 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005356 exon5 c.G1003T p.D335Y . . . POTEG 404785 broad.mit.edu 36 14 18644229 18644229 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005356 exon9 c.T1286C p.F429S . . . OR4M1 441670 broad.mit.edu 36 14 19318650 19318650 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005500 exon1 c.C329T p.S110L . . . OR4K15 81127 broad.mit.edu 36 14 19513929 19513929 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005486 exon1 c.C412T p.L138F . . . OR4L1 122742 broad.mit.edu 36 14 19598498 19598498 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004717 exon1 c.G455T p.G152V . . . OR4K17 390436 broad.mit.edu 36 14 19655722 19655722 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004715 exon1 c.C317A p.S106Y . . . OR4K17 390436 broad.mit.edu 36 14 19656349 19656349 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004715 exon1 c.C944A p.P315Q . . . PARP2 10038 broad.mit.edu 36 14 19892873 19892873 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042618 exon9 c.C829T p.R277W . . . RNASE11 122651 broad.mit.edu 36 14 20122305 20122305 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145250 exon3 c.C169A p.L57M . . . RNASE6 6039 broad.mit.edu 36 14 20320070 20320070 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005615 exon2 c.C372A p.F124L . . . RNASE3 6037 broad.mit.edu 36 14 20429704 20429704 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002935 exon2 c.A19G p.T7A . . . RNASE8 122665 broad.mit.edu 36 14 20596078 20596078 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138331 exon1 c.C187T p.R63W . . . OR5AU1 390445 broad.mit.edu 36 14 20693596 20693596 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004731 exon1 c.C429A p.I143I . . . RPGRIP1 57096 broad.mit.edu 36 14 20859332 20859332 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020366 exon12 c.G1542T p.E514D . . . RPGRIP1 57096 broad.mit.edu 36 14 20866469 20866469 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020366 exon18 c.G2942A p.R981Q . . . SUPT16H 11198 broad.mit.edu 36 14 20895317 20895317 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007192 exon22 c.C2539T p.R847W . . . CHD8 57680 broad.mit.edu 36 14 20943447 20943447 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020920 exon16 c.C2231T p.A744V . . . TOX4 9878 broad.mit.edu 36 14 21033258 21033258 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014828 exon8 c.T1672G p.L558V . . . OR10G3 26533 broad.mit.edu 36 14 21108515 21108515 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005465 exon1 c.C201T p.L67L . . . OR10G2 26534 broad.mit.edu 36 14 21172218 21172218 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005466 exon1 c.C621T p.D207D . . . MMP14 4323 broad.mit.edu 36 14 22375871 22375871 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004995 exon1 c.C5A p.S2Y . . . PRMT5 10419 broad.mit.edu 36 14 22463970 22463970 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006109 exon8 c.C897A p.L299L . . . CDH24 64403 broad.mit.edu 36 14 22593216 22593216 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022478 exon6 c.C946T p.R316X . . . MYH6 4624 broad.mit.edu 36 14 22924032 22924032 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002471 exon35 c.C5222T p.S1741L . . . MYH6 4624 broad.mit.edu 36 14 22927291 22927291 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002471 exon30 c.G4272T p.Q1424H . . . MYH6 4624 broad.mit.edu 36 14 22939450 22939450 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002471 exon14 c.T1436C p.I479T . . . MYH6 4624 broad.mit.edu 36 14 22944298 22944298 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002471 exon5 c.A476G p.D159G . . . MYH7 4625 broad.mit.edu 36 14 22966702 22966702 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000257 exon16 c.G1820A p.G607D . . . NGDN 25983 broad.mit.edu 36 14 23017069 23017069 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042635 exon11 c.G942A p.R314R . . . PCK2 5106 broad.mit.edu 36 14 23639294 23639294 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018073 exon7 c.T1266C p.P422P . . . RNF31 55072 broad.mit.edu 36 14 23698914 23698914 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017999 exon19 c.C2901A p.G967G . . . IPO4 79711 broad.mit.edu 36 14 23725996 23725996 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024658 exon8 c.G684T p.L228F . . . TM9SF1 10548 broad.mit.edu 36 14 23729439 23729439 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014842 exon5 c.T1414G p.F472V . . . MDP1 145553 broad.mit.edu 36 14 23754800 23754800 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199822 exon2 c.T81C p.P27P . . . GMPR2 51292 broad.mit.edu 36 14 23777806 23777806 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016576 exon9 c.C1083A p.I361I . . . TGM1 7051 broad.mit.edu 36 14 23799683 23799683 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000359 exon4 c.T570C p.S190S . . . ADCY4 196883 broad.mit.edu 36 14 23861183 23861183 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198568 exon20 c.C2515T p.R839W . . . ADCY4 196883 broad.mit.edu 36 14 23863222 23863222 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198568 exon16 c.G1932T p.K644N . . . NFATC4 4776 broad.mit.edu 36 14 23915717 23915717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136022 exon10 c.C2623T p.R875W . . . NYNRIN 57523 broad.mit.edu 36 14 23947459 23947459 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025081 exon3 c.G743A p.G248E . . . NYNRIN 57523 broad.mit.edu 36 14 23948274 23948274 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025081 exon4 c.G1434T p.Q478H . . . STXBP6 29091 broad.mit.edu 36 14 24358166 24358166 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014178 exon5 c.C526T p.R176C . . . NOVA1 4857 broad.mit.edu 36 14 25987145 25987145 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006489 exon4 c.G1312A p.E438K . . . FOXG1 2290 broad.mit.edu 36 14 28307466 28307466 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005249 exon1 c.C1230T p.L410L . . . PRKD1 5587 broad.mit.edu 36 14 29116369 29116369 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002742 exon18 c.C2565T p.I855I . . . PRKD1 5587 broad.mit.edu 36 14 29173384 29173384 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002742 exon8 c.G1305T p.K435N . . . PRKD1 5587 broad.mit.edu 36 14 29177694 29177694 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002742 exon5 c.G864T p.K288N . . . PRKD1 5587 broad.mit.edu 36 14 29264517 29264517 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002742 exon2 c.G379A p.D127N . . . SCFD1 23256 broad.mit.edu 36 14 30246948 30246948 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182835 exon18 c.C1354A p.L452I . . . STRN3 29966 broad.mit.edu 36 14 30475580 30475580 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083893 exon6 c.T718C p.S240P . . . HECTD1 25831 broad.mit.edu 36 14 30645785 30645785 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015382 exon38 c.C7044T p.D2348D . . . HECTD1 25831 broad.mit.edu 36 14 30683774 30683774 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015382 exon16 c.C2621A p.T874K . . . HECTD1 25831 broad.mit.edu 36 14 30710879 30710879 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015382 exon8 c.G1271T p.R424I . . . AKAP6 9472 broad.mit.edu 36 14 31972591 31972591 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon2 c.C141T p.D47D . . . AKAP6 9472 broad.mit.edu 36 14 32139604 32139604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon7 c.G2585A p.R862Q . . . AKAP6 9472 broad.mit.edu 36 14 32312652 32312652 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon12 c.C3390A p.I1130I . . . AKAP6 9472 broad.mit.edu 36 14 32362095 32362095 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004274 exon13 c.C5325T p.D1775D . . . NPAS3 64067 broad.mit.edu 36 14 32754501 32754501 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173159 exon3 c.A303G p.Q101Q . . . NPAS3 64067 broad.mit.edu 36 14 33274234 33274234 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022123 exon6 c.G701A p.R234Q . . . EGLN3 112399 broad.mit.edu 36 14 33470150 33470150 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022073 exon2 c.G380A p.G127E . . . BAZ1A 11177 broad.mit.edu 36 14 34341923 34341923 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013448 exon7 c.A749C p.K250T . . . PPP2R3C 55012 broad.mit.edu 36 14 34624691 34624691 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017917 exon13 c.C1218A p.I406I . . . PPP2R3C 55012 broad.mit.edu 36 14 34630033 34630033 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017917 exon11 c.C1107A p.F369L . . . SFTA3 253970 broad.mit.edu 36 14 36052075 36052075 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101341 exon1 c.G35T p.R12M . . . CLEC14A 161198 broad.mit.edu 36 14 37793581 37793581 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175060 exon1 c.C1398T p.V466V . . . CLEC14A 161198 broad.mit.edu 36 14 37794640 37794640 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175060 exon1 c.C339A p.F113L . . . PNN 5411 broad.mit.edu 36 14 38720693 38720693 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002687 exon9 c.G2029T p.G677X . . . MIA2 117153 broad.mit.edu 36 14 38775928 38775928 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054024 exon2 c.G167A p.R56Q . . . MIA2 117153 broad.mit.edu 36 14 38786805 38786805 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054024 exon4 c.G1276T p.E426X . . . CTAGE5 4253 broad.mit.edu 36 14 38832301 38832301 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203356 exon6 c.G373A p.E125K . . . CTAGE5 4253 broad.mit.edu 36 14 38859935 38859935 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203356 exon19 c.A1509G p.R503R . . . LRFN5 145581 broad.mit.edu 36 14 41430445 41430445 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152447 exon4 c.T1628C p.V543A . . . FSCB 84075 broad.mit.edu 36 14 44044442 44044442 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032135 exon1 c.C1499A p.S500Y . . . FSCB 84075 broad.mit.edu 36 14 44045400 44045400 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032135 exon1 c.G541T p.A181S . . . KLHL28 54813 broad.mit.edu 36 14 44473143 44473143 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017658 exon3 c.G1268T p.R423I . . . KLHL28 54813 broad.mit.edu 36 14 44473308 44473308 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017658 exon3 c.C1103A p.S368Y . . . FAM179B 23116 broad.mit.edu 36 14 44502159 44502159 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015091 exon1 c.G785A p.R262Q . . . FAM179B 23116 broad.mit.edu 36 14 44612488 44612488 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015091 exon19 c.G5137A p.D1713N . . . FANCM 57697 broad.mit.edu 36 14 44714269 44714269 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020937 exon14 c.G2562T p.K854N . . . FANCM 57697 broad.mit.edu 36 14 44737845 44737845 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020937 exon22 c.A5965C p.N1989H . . . RPL10L 140801 broad.mit.edu 36 14 46190152 46190152 + Missense_Mutation SNP C T T rs61745038 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080746 exon1 c.G538A p.E180K . . . RPL10L 140801 broad.mit.edu 36 14 46190591 46190591 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080746 exon1 c.C99A p.I33I . . . MGAT2 4247 broad.mit.edu 36 14 49158243 49158243 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002408 exon1 c.C507T p.F169F . . . SDCCAG1 9147 broad.mit.edu 36 14 49365190 49365190 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004713 exon14 c.G1318T p.G440X . . . SDCCAG1 9147 broad.mit.edu 36 14 49367806 49367806 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004713 exon11 c.G906T p.K302N . . . ARF6 382 broad.mit.edu 36 14 49430295 49430295 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001663 exon2 c.T91C p.Y31H . . . SOS2 6655 broad.mit.edu 36 14 49675146 49675146 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006939 exon18 c.A2892C p.E964D . . . SOS2 6655 broad.mit.edu 36 14 49676495 49676495 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006939 exon17 c.C2700T p.D900D . . . L2HGDH 79944 broad.mit.edu 36 14 49805786 49805786 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024884 exon7 c.C751T p.R251X . . . MAP4K5 11183 broad.mit.edu 36 14 50022650 50022650 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006575 exon4 c.C179A p.S60Y . . . ATL1 51062 broad.mit.edu 36 14 50128022 50128022 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181598 exon4 c.A437G p.D146G . . . PYGL 5836 broad.mit.edu 36 14 50448265 50448265 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002863 exon16 c.C1902T p.D634D . . . PYGL 5836 broad.mit.edu 36 14 50451818 50451818 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002863 exon11 c.C1389T p.I463I . . . TRIM9 114088 broad.mit.edu 36 14 50518499 50518499 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015163 exon8 c.C1676T p.T559I . . . FRMD6 122786 broad.mit.edu 36 14 51241376 51241376 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042481 exon7 c.C507T p.F169F . . . FRMD6 122786 broad.mit.edu 36 14 51256570 51256570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042481 exon12 c.G1048A p.D350N . . . FRMD6 122786 broad.mit.edu 36 14 51262271 51262271 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042481 exon14 c.C1493A p.S498Y . . . NID2 22795 broad.mit.edu 36 14 51547441 51547441 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007361 exon18 c.A3625T p.K1209X . . . PTGER2 5732 broad.mit.edu 36 14 51851370 51851370 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000956 exon1 c.C354A p.F118L . . . GMFB 2764 broad.mit.edu 36 14 54020228 54020228 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004124 exon2 c.C11A p.S4Y . . . EXOC5 10640 broad.mit.edu 36 14 56766332 56766332 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006544 exon12 c.G1169A p.R390K . . . C14orf105 55195 broad.mit.edu 36 14 57027467 57027467 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018168 exon2 c.G299T p.R100I . . . C14orf37 145407 broad.mit.edu 36 14 57669812 57669812 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001872 exon3 c.A1370C p.D457A . . . ARID4A 5926 broad.mit.edu 36 14 57866013 57866013 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023000 exon10 c.G677A p.R226K . . . ARID4A 5926 broad.mit.edu 36 14 57890226 57890226 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023000 exon17 c.C1753T p.R585X . . . KIAA0586 9786 broad.mit.edu 36 14 57980547 57980547 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014749 exon6 c.G708T p.E236D . . . PPM1A 5494 broad.mit.edu 36 14 59819271 59819271 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021003 exon2 c.C97T p.R33C . . . PPM1A 5494 broad.mit.edu 36 14 59826309 59826309 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021003 exon4 c.G985A p.D329N . . . C14orf39 317761 broad.mit.edu 36 14 60021518 60021518 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174978 exon2 c.G32A p.R11K . . . SIX4 51804 broad.mit.edu 36 14 60250055 60250055 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017420 exon3 c.G2169T p.E723D . . . SIX4 51804 broad.mit.edu 36 14 60256396 60256396 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017420 exon2 c.G1384A p.A462T . . . KCNH5 27133 broad.mit.edu 36 14 62243998 62243998 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139318 exon11 c.A2948C p.K983T . . . SYNE2 23224 broad.mit.edu 36 14 63567500 63567500 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon45 c.G6893A p.R2298K . . . SYNE2 23224 broad.mit.edu 36 14 63610450 63610450 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon53 c.A10709C p.K3570T . . . SYNE2 23224 broad.mit.edu 36 14 63689091 63689091 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon85 c.T15696G p.S5232R . . . SYNE2 23224 broad.mit.edu 36 14 63722956 63722956 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015180 exon97 c.C17618T p.A5873V . . . ESR2 2100 broad.mit.edu 36 14 63769626 63769626 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001437 exon9 c.G1575A p.Q525Q . . . AKAP5 9495 broad.mit.edu 36 14 64005805 64005805 + Nonsense_Mutation SNP G T T rs34433837 byCluster;byFrequency TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004857 exon2 c.G940T p.E314X . . . AKAP5 9495 broad.mit.edu 36 14 64006138 64006138 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004857 exon2 c.C1273A p.L425I . . . SPTB 6710 broad.mit.edu 36 14 64306135 64306135 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000347 exon27 c.C5863T p.R1955W . . . GPHN 10243 broad.mit.edu 36 14 66460714 66460714 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020806 exon8 c.G780A p.Q260Q . . . FAM71D 161142 broad.mit.edu 36 14 66734713 66734713 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173526 exon3 c.G82T p.D28Y . . . MPP5 64398 broad.mit.edu 36 14 66838892 66838892 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022474 exon7 c.C814T p.R272C . . . EIF2S1 1965 broad.mit.edu 36 14 66918076 66918076 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004094 exon6 c.T594G p.A198A . . . ARG2 384 broad.mit.edu 36 14 67183434 67183434 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172 exon6 c.G661T p.D221Y . . . ACTN1 87 broad.mit.edu 36 14 68420778 68420778 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130005 exon14 c.C1495T p.R499W . . . DCAF5 8816 broad.mit.edu 36 14 68590794 68590794 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003861 exon9 c.C2362T p.R788W . . . GALNTL1 57452 broad.mit.edu 36 14 68870001 68870001 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020692 exon9 c.G898A p.D300N . . . SRSF5 6430 broad.mit.edu 36 14 69307498 69307498 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039465 exon7 c.G474T p.K158N . . . ADAM21 8747 broad.mit.edu 36 14 69994185 69994185 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003813 exon1 c.C216T p.H72H . . . PCNX 22990 broad.mit.edu 36 14 70514435 70514435 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014982 exon6 c.G1628A p.R543Q . . . PCNX 22990 broad.mit.edu 36 14 70645274 70645274 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014982 exon34 c.C6502T p.R2168X . . . DPF3 8110 broad.mit.edu 36 14 72229575 72229575 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012074 exon7 c.C704A p.T235N . . . DPF3 8110 broad.mit.edu 36 14 72250891 72250891 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012074 exon6 c.C597A p.V199V . . . ZFYVE1 53349 broad.mit.edu 36 14 72534557 72534557 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021260 exon3 c.G703A p.D235N . . . PSEN1 5663 broad.mit.edu 36 14 72734527 72734527 + Missense_Mutation SNP C T T rs63751019 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000021 exon8 c.C805T p.R269C . . . NUMB 8650 broad.mit.edu 36 14 72892125 72892125 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005744 exon4 c.G88T p.E30X . . . FAM161B 145483 broad.mit.edu 36 14 73481005 73481005 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152445 exon3 c.C711T p.S237S . . . C14orf45 80127 broad.mit.edu 36 14 73559454 73559454 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025057 exon2 c.G139A p.E47K . . . LTBP2 4053 broad.mit.edu 36 14 74039342 74039342 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000428 exon34 c.A4937C p.E1646A . . . LTBP2 4053 broad.mit.edu 36 14 74047773 74047773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000428 exon19 c.G2956A p.V986I . . . YLPM1 56252 broad.mit.edu 36 14 74314963 74314963 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019589 exon2 c.C934A p.H312N . . . YLPM1 56252 broad.mit.edu 36 14 74335243 74335243 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019589 exon5 c.C3490T p.R1164C . . . YLPM1 56252 broad.mit.edu 36 14 74346722 74346722 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019589 exon9 c.C5074T p.R1692C . . . MLH3 27030 broad.mit.edu 36 14 74585077 74585077 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040108 exon2 c.A1035C p.K345N . . . FAM164C 79696 broad.mit.edu 36 14 74607894 74607894 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024643 exon2 c.G865T p.E289X . . . NEK9 91754 broad.mit.edu 36 14 74646201 74646201 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033116 exon10 c.C1122A p.V374V . . . C14orf118 55668 broad.mit.edu 36 14 75707974 75707974 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017926 exon4 c.G763T p.E255X . . . C14orf166B 145497 broad.mit.edu 36 14 76367470 76367470 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194287 exon3 c.T389C p.V130A . . . TMEM63C 57156 broad.mit.edu 36 14 76792790 76792790 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020431 exon24 c.C2389T p.L797L . . . SAMD15 161394 broad.mit.edu 36 14 76914613 76914613 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010860 exon1 c.T1099G p.S367A . . . SAMD15 161394 broad.mit.edu 36 14 76915086 76915086 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010860 exon1 c.C1572A p.V524V . . . C14orf148 122945 broad.mit.edu 36 14 76930862 76930862 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113475 exon6 c.G945T p.K315N . . . SPTLC2 9517 broad.mit.edu 36 14 77115184 77115184 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004863 exon3 c.G349T p.D117Y . . . NRXN3 9369 broad.mit.edu 36 14 79233890 79233890 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004796 exon15 c.C2662T p.R888W . . . NRXN3 9369 broad.mit.edu 36 14 79234005 79234005 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004796 exon15 c.G2777A p.R926H . . . C14orf145 145508 broad.mit.edu 36 14 80321633 80321633 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152446 exon14 c.G1570T p.E524X . . . TSHR 7253 broad.mit.edu 36 14 80679878 80679878 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000369 exon10 c.G1723A p.E575K . . . SEL1L 6400 broad.mit.edu 36 14 81035751 81035751 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005065 exon7 c.C786A p.G262G . . . FLRT2 23768 broad.mit.edu 36 14 85158647 85158647 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013231 exon2 c.C1036T p.R346W . . . PTPN21 11099 broad.mit.edu 36 14 88016423 88016423 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007039 exon13 c.G1105A p.G369R . . . EML5 161436 broad.mit.edu 36 14 88152286 88152286 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183387 exon42 c.T5850C p.F1950F . . . EML5 161436 broad.mit.edu 36 14 88194399 88194399 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183387 exon26 c.T3762G p.V1254V . . . EML5 161436 broad.mit.edu 36 14 88223356 88223356 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183387 exon19 c.G2811T p.K937N . . . EML5 161436 broad.mit.edu 36 14 88276506 88276506 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183387 exon5 c.G689A p.R230Q . . . TTC8 123016 broad.mit.edu 36 14 88407647 88407647 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198309 exon11 c.C1021T p.R341W . . . C14orf102 55051 broad.mit.edu 36 14 89852739 89852739 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017970 exon3 c.G343A p.D115N . . . CALM1 801 broad.mit.edu 36 14 89940056 89940056 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006888 exon4 c.C276A p.V92V . . . C14orf159 80017 broad.mit.edu 36 14 90696461 90696461 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024952 exon3 c.C70T p.P24S . . . CATSPERB 79820 broad.mit.edu 36 14 91124115 91124115 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024764 exon25 c.C3017T p.A1006V . . . TC2N 123036 broad.mit.edu 36 14 91323679 91323679 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152332 exon10 c.A1093C p.N365H . . . TC2N 123036 broad.mit.edu 36 14 91338367 91338367 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152332 exon4 c.G453A p.K151K . . . TRIP11 9321 broad.mit.edu 36 14 91539908 91539908 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004239 exon11 c.G4165A p.E1389K . . . TRIP11 9321 broad.mit.edu 36 14 91541763 91541763 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004239 exon11 c.G2310T p.K770N . . . ATXN3 4287 broad.mit.edu 36 14 91632784 91632784 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127696 exon2 c.G176A p.R59H . . . SLC24A4 123041 broad.mit.edu 36 14 91979559 91979559 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153648 exon7 c.C453T p.I151I . . . ITPK1 3705 broad.mit.edu 36 14 92552818 92552818 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142593 exon4 c.G202A p.D68N . . . BTBD7 55727 broad.mit.edu 36 14 92784625 92784625 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002860 exon9 c.C2071T p.R691X . . . BTBD7 55727 broad.mit.edu 36 14 92799948 92799948 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002860 exon4 c.C1307T p.S436L . . . KIAA1409 57578 broad.mit.edu 36 14 93074182 93074182 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon12 c.G686T p.R229M . . . KIAA1409 57578 broad.mit.edu 36 14 93129808 93129808 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon23 c.C2531T p.S844F . . . KIAA1409 57578 broad.mit.edu 36 14 93157795 93157795 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon30 c.G3932T p.S1311I . . . KIAA1409 57578 broad.mit.edu 36 14 93177323 93177323 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon34 c.G5466T p.E1822D . . . KIAA1409 57578 broad.mit.edu 36 14 93191350 93191350 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon39 c.G5886T p.K1962N . . . KIAA1409 57578 broad.mit.edu 36 14 93224814 93224814 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020818 exon45 c.A6546G p.G2182G . . . DDX24 57062 broad.mit.edu 36 14 93598307 93598307 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020414 exon3 c.G1132A p.A378T . . . PPP4R4 57718 broad.mit.edu 36 14 93801509 93801509 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058237 exon21 c.C2230A p.P744T . . . SERPINA11 256394 broad.mit.edu 36 14 93984347 93984347 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080451 exon2 c.C518A p.S173Y . . . SERPINA11 256394 broad.mit.edu 36 14 93984540 93984540 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080451 exon2 c.G325T p.E109X . . . SERPINA12 145264 broad.mit.edu 36 14 94032492 94032492 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173850 exon4 c.C876A p.F292L . . . SERPINA12 145264 broad.mit.edu 36 14 94032619 94032619 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173850 exon4 c.G749A p.G250D . . . SERPINA12 145264 broad.mit.edu 36 14 94034023 94034023 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173850 exon3 c.G465T p.K155N . . . DICER1 23405 broad.mit.edu 36 14 94626691 94626691 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177438 exon27 c.A5666C p.K1889T . . . DICER1 23405 broad.mit.edu 36 14 94643770 94643770 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177438 exon17 c.G2732T p.S911I . . . CLMN 79789 broad.mit.edu 36 14 94746933 94746933 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024734 exon7 c.G645A p.W215X . . . ATG2B 55102 broad.mit.edu 36 14 95847667 95847667 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018036 exon27 c.A3955G p.I1319V . . . AK7 122481 broad.mit.edu 36 14 95956944 95956944 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152327 exon5 c.T531G p.D177E . . . EML1 2009 broad.mit.edu 36 14 99434379 99434379 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008707 exon9 c.C941T p.S314L . . . EML1 2009 broad.mit.edu 36 14 99473920 99473920 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008707 exon21 c.C2166A p.A722A . . . EVL 51466 broad.mit.edu 36 14 99673691 99673691 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016337 exon10 c.C988T p.R330W . . . SNORD113-5 767565 broad.mit.edu 36 14 100472605 100472605 + 5'Flank SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MIR369 442914 broad.mit.edu 36 14 100601559 100601559 + 5'Flank SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ADAM6 8755 broad.mit.edu 36 14 105162588 105162588 + RNA SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ADAM6 8755 broad.mit.edu 36 14 105712612 105712612 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADAM6 8755 broad.mit.edu 36 14 105738630 105738630 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ADAM6 8755 broad.mit.edu 36 14 105916628 105916628 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SUPT16H 11198 broad.mit.edu 36 14 20901025 20901025 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CHD8 57680 broad.mit.edu 36 14 20932203 20932203 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21306630 21306630 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21379760 21379760 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21391000 21391000 + IGR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21426420 21426420 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21650769 21650769 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 21852752 21852752 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 22001879 22001879 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 22005250 22005250 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 22074404 22074404 + IGR SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 22090392 22090392 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYH6 4624 broad.mit.edu 36 14 22946061 22946061 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AKAP6 9472 broad.mit.edu 36 14 31972442 31972442 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SNX6 58533 broad.mit.edu 36 14 34106981 34106981 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PSMA6 5687 broad.mit.edu 36 14 34853307 34853307 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 14 37381117 37381117 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MDGA2 161357 broad.mit.edu 36 14 46394111 46394111 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C14orf104 55172 broad.mit.edu 36 14 49164479 49164479 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDKL1 8814 broad.mit.edu 36 14 49933583 49933583 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRIM9 114088 broad.mit.edu 36 14 50516029 50516029 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DDHD1 80821 broad.mit.edu 36 14 52628245 52628245 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DLGAP5 9787 broad.mit.edu 36 14 54684950 54684950 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C14orf135 64430 broad.mit.edu 36 14 59644780 59644780 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MED6 10001 broad.mit.edu 36 14 70129468 70129468 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RGS6 9628 broad.mit.edu 36 14 71994845 71994845 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RGS6 9628 broad.mit.edu 36 14 72054800 72054800 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SEL1L 6400 broad.mit.edu 36 14 81034597 81034597 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EML5 161436 broad.mit.edu 36 14 88151958 88151958 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C14orf48 256369 broad.mit.edu 36 14 93537345 93537345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SERPINA10 51156 broad.mit.edu 36 14 93820252 93820252 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CYP46A1 10858 broad.mit.edu 36 14 99261477 99261477 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TARSL2 123283 broad.mit.edu 36 15 100014684 100014684 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152334 exon18 c.C2224T p.R742X . . . OR4M2 390538 broad.mit.edu 36 15 19870639 19870639 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004719 exon1 c.A700G p.N234D . . . OR4N4 283694 broad.mit.edu 36 15 19884500 19884500 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005241 exon1 c.C664A p.L222I . . . MKRN3 7681 broad.mit.edu 36 15 21363065 21363065 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005664 exon1 c.G1043T p.R348I . . . C15orf2 23742 broad.mit.edu 36 15 22473835 22473835 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018958 exon1 c.T1728G p.V576V . . . SNURF 8926 broad.mit.edu 36 15 22764259 22764259 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022804 exon3 c.G198T p.E66D . . . UBE3A 7337 broad.mit.edu 36 15 23171855 23171855 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000462 exon3 c.G220A p.E74K . . . ATP10A 57194 broad.mit.edu 36 15 23510009 23510009 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024490 exon10 c.C2249A p.S750X . . . ATP10A 57194 broad.mit.edu 36 15 23522191 23522191 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024490 exon5 c.G979A p.G327R . . . ATP10A 57194 broad.mit.edu 36 15 23577454 23577454 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024490 exon2 c.G459A p.K153K . . . GABRA5 2558 broad.mit.edu 36 15 24679628 24679628 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165037 exon6 c.C328T p.R110W . . . OCA2 4948 broad.mit.edu 36 15 25943641 25943641 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000275 exon5 c.G518A p.R173H . . . HERC2 8924 broad.mit.edu 36 15 26120253 26120253 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004667 exon48 c.C7660T p.R2554X . . . HERC2 8924 broad.mit.edu 36 15 26181731 26181731 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004667 exon15 c.G2050T p.G684C . . . HERC2 8924 broad.mit.edu 36 15 26193040 26193040 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004667 exon7 c.C792T p.V264V . . . MTMR10 54893 broad.mit.edu 36 15 29038565 29038565 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017762 exon8 c.G810T p.K270N . . . TRPM1 4308 broad.mit.edu 36 15 29081546 29081546 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002420 exon27 c.G4583T p.R1528I . . . TRPM1 4308 broad.mit.edu 36 15 29117307 29117307 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002420 exon19 c.G2404A p.G802R . . . ARHGAP11A 9824 broad.mit.edu 36 15 30703030 30703030 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199357 exon3 c.C246T p.T82T . . . FMN1 342184 broad.mit.edu 36 15 30878312 30878312 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103184 exon15 c.A3446C p.N1149T . . . RYR3 6263 broad.mit.edu 36 15 31811108 31811108 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon48 c.A7345C p.I2449L . . . RYR3 6263 broad.mit.edu 36 15 31906188 31906188 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001036 exon84 c.G11188A p.E3730K . . . SLC12A6 9990 broad.mit.edu 36 15 32338434 32338434 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042497 exon3 c.G370T p.E124X . . . SLC12A6 9990 broad.mit.edu 36 15 32416103 32416103 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042497 exon1 c.A71C p.D24A . . . C15orf55 256646 broad.mit.edu 36 15 32427626 32427626 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175741 exon2 c.C181T p.L61L . . . AQR 9716 broad.mit.edu 36 15 32983900 32983900 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014691 exon19 c.A1930C p.N644H . . . ZNF770 54989 broad.mit.edu 36 15 33061024 33061024 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014106 exon3 c.G1904A p.R635Q . . . ZNF770 54989 broad.mit.edu 36 15 33061607 33061607 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014106 exon3 c.T1321C p.S441P . . . ZNF770 54989 broad.mit.edu 36 15 33062335 33062335 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014106 exon3 c.G593A p.R198Q . . . TMCO5A 145942 broad.mit.edu 36 15 36016363 36016363 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152453 exon3 c.C164T p.T55M . . . SPRED1 161742 broad.mit.edu 36 15 36378943 36378943 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152594 exon2 c.G110A p.S37N . . . SPRED1 161742 broad.mit.edu 36 15 36419236 36419236 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152594 exon5 c.G430T p.E144X . . . THBS1 7057 broad.mit.edu 36 15 37668453 37668453 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003246 exon11 c.T1647C p.D549D . . . THBS1 7057 broad.mit.edu 36 15 37668823 37668823 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003246 exon12 c.C1902T p.V634V . . . THBS1 7057 broad.mit.edu 36 15 37669309 37669309 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003246 exon13 c.C1938T p.P646P . . . BMF 90427 broad.mit.edu 36 15 38171368 38171368 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033503 exon4 c.A467G p.Q156R . . . CASC5 57082 broad.mit.edu 36 15 38698463 38698463 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170589 exon10 c.C415A p.L139I . . . CASC5 57082 broad.mit.edu 36 15 38700758 38700758 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170589 exon11 c.A1082C p.N361T . . . CASC5 57082 broad.mit.edu 36 15 38704037 38704037 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170589 exon11 c.A4361G p.D1454G . . . CASC5 57082 broad.mit.edu 36 15 38708798 38708798 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170589 exon14 c.C5697A p.F1899L . . . DNAJC17 55192 broad.mit.edu 36 15 38853914 38853914 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018163 exon9 c.C613A p.L205I . . . VPS18 57617 broad.mit.edu 36 15 38978680 38978680 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020857 exon4 c.G372T p.V124V . . . INO80 54617 broad.mit.edu 36 15 39077082 39077082 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017553 exon29 c.C3507A p.I1169I . . . TYRO3 7301 broad.mit.edu 36 15 39657440 39657440 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006293 exon19 c.C2347T p.R783X . . . MGA 23269 broad.mit.edu 36 15 39749206 39749206 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080541 exon2 c.G822T p.K274N . . . MGA 23269 broad.mit.edu 36 15 39815984 39815984 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080541 exon13 c.G4230T p.E1410D . . . MAPKBP1 23005 broad.mit.edu 36 15 39903454 39903454 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014994 exon29 c.C4116A p.L1372L . . . JMJD7-PLA2G4B 8681 broad.mit.edu 36 15 39925223 39925223 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114633 exon15 c.C1453A p.L485M . . . EHD4 30844 broad.mit.edu 36 15 39980634 39980634 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139265 exon6 c.C1127T p.S376L . . . VPS39 23339 broad.mit.edu 36 15 40253232 40253232 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015289 exon11 c.C1071A p.V357V . . . CAPN3 825 broad.mit.edu 36 15 40439305 40439305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173087 exon1 c.G10A p.V4I . . . ZFP106 64397 broad.mit.edu 36 15 40497381 40497381 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022473 exon18 c.G5509A p.D1837N . . . ZFP106 64397 broad.mit.edu 36 15 40526088 40526088 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022473 exon4 c.G3127T p.G1043X . . . ZFP106 64397 broad.mit.edu 36 15 40529642 40529642 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022473 exon2 c.A2051C p.K684T . . . TTBK2 146057 broad.mit.edu 36 15 40825739 40825739 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173500 exon15 c.G3281T p.R1094I . . . TGM5 9333 broad.mit.edu 36 15 41318347 41318347 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004245 exon8 c.C1059T p.D353D . . . TGM7 116179 broad.mit.edu 36 15 41359240 41359240 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052955 exon10 c.G1553A p.S518N . . . LCMT2 9836 broad.mit.edu 36 15 41408077 41408077 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014793 exon1 c.C1903T p.P635S . . . TUBGCP4 27229 broad.mit.edu 36 15 41465803 41465803 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014444 exon9 c.C997T p.R333C . . . TUBGCP4 27229 broad.mit.edu 36 15 41479568 41479568 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014444 exon14 c.C1453T p.R485C . . . TP53BP1 7158 broad.mit.edu 36 15 41495850 41495850 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005657 exon22 c.G4723T p.E1575X . . . TP53BP1 7158 broad.mit.edu 36 15 41560424 41560424 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005657 exon5 c.G445T p.D149Y . . . MAP1A 4130 broad.mit.edu 36 15 41603760 41603760 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002373 exon4 c.T2797C p.S933P . . . MAP1A 4130 broad.mit.edu 36 15 41604584 41604584 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002373 exon4 c.G3621A p.E1207E . . . MAP1A 4130 broad.mit.edu 36 15 41606788 41606788 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002373 exon4 c.C5825T p.A1942V . . . PPIP5K1 9677 broad.mit.edu 36 15 41619049 41619049 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130859 exon28 c.G3335A p.S1112N . . . ELL3 80237 broad.mit.edu 36 15 41855256 41855256 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025165 exon4 c.T439C p.S147P . . . ELL3 80237 broad.mit.edu 36 15 41855411 41855411 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025165 exon4 c.C284A p.S95Y . . . FRMD5 84978 broad.mit.edu 36 15 41953598 41953598 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032892 exon14 c.T1490G p.F497C . . . CASC4 113201 broad.mit.edu 36 15 42417258 42417258 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177974 exon5 c.G582T p.E194D . . . SPG11 80208 broad.mit.edu 36 15 42680074 42680074 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160227 exon21 c.A3569G p.K1190R . . . B2M 567 broad.mit.edu 36 15 42795821 42795821 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004048 exon3 c.C349T p.R117X . . . TRIM69 140691 broad.mit.edu 36 15 42847051 42847051 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182985 exon7 c.C1292T p.S431F . . . DUOX2 50506 broad.mit.edu 36 15 43183464 43183464 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014080 exon20 c.C2640A p.F880L . . . DUOXA2 405753 broad.mit.edu 36 15 43195705 43195705 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207581 exon3 c.C297T p.V99V . . . DUOXA1 90527 broad.mit.edu 36 15 43197555 43197555 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144565 exon10 c.C996T p.R332R . . . DUOX1 53905 broad.mit.edu 36 15 43231783 43231783 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017434 exon26 c.C3201A p.A1067A . . . DUOX1 53905 broad.mit.edu 36 15 43235361 43235361 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017434 exon29 c.G3644A p.R1215H . . . DUOX1 53905 broad.mit.edu 36 15 43244280 43244280 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017434 exon35 c.C4545T p.I1515I . . . GATM 2628 broad.mit.edu 36 15 43441644 43441644 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001482 exon9 c.C1227T p.T409T . . . SPATA5L1 79029 broad.mit.edu 36 15 43495089 43495089 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024063 exon5 c.G1657C p.A553P . . . PLDN 26258 broad.mit.edu 36 15 43682629 43682629 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012388 exon3 c.G264T p.E88D . . . SEMA6D 80031 broad.mit.edu 36 15 45843413 45843413 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153619 exon10 c.G822T p.W274C . . . MYEF2 50804 broad.mit.edu 36 15 46222483 46222483 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016132 exon17 c.G1717T p.E573X . . . SLC12A1 6557 broad.mit.edu 36 15 46287412 46287412 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184832 exon2 c.G204T p.E68D . . . SLC12A1 6557 broad.mit.edu 36 15 46309892 46309892 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184832 exon7 c.C875T p.S292L . . . FBN1 2200 broad.mit.edu 36 15 46524961 46524961 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon48 c.C5821A p.L1941I . . . FBN1 2200 broad.mit.edu 36 15 46542670 46542670 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000138 exon42 c.G5125T p.E1709X . . . CEP152 22995 broad.mit.edu 36 15 46821578 46821578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194998 exon25 c.C3847T p.R1283C . . . CEP152 22995 broad.mit.edu 36 15 46841913 46841913 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194998 exon18 c.G2529T p.L843F . . . SECISBP2L 9728 broad.mit.edu 36 15 47097047 47097047 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014701 exon8 c.C1106A p.S369Y . . . GABPB1 2553 broad.mit.edu 36 15 48365595 48365595 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002041 exon8 c.G997A p.E333K . . . TRPM7 54822 broad.mit.edu 36 15 48641181 48641181 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017672 exon39 c.C5584T p.R1862C . . . TRPM7 54822 broad.mit.edu 36 15 48692277 48692277 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017672 exon16 c.A1812C p.K604N . . . AP4E1 23431 broad.mit.edu 36 15 49008514 49008514 + Nonsense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007347 exon6 c.A559T p.K187X . . . AP4E1 23431 broad.mit.edu 36 15 49021016 49021016 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007347 exon9 c.A1029C p.K343N . . . CYP19A1 1588 broad.mit.edu 36 15 49322300 49322300 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031226 exon3 c.T102C p.L34L . . . DMXL2 23312 broad.mit.edu 36 15 49538055 49538055 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon35 c.C8072A p.S2691Y . . . DMXL2 23312 broad.mit.edu 36 15 49553908 49553908 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon28 c.C7135T p.R2379X . . . DMXL2 23312 broad.mit.edu 36 15 49579418 49579418 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon18 c.G3295T p.E1099X . . . DMXL2 23312 broad.mit.edu 36 15 49626740 49626740 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon7 c.A725C p.K242T . . . DMXL2 23312 broad.mit.edu 36 15 49647996 49647996 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015263 exon3 c.A265C p.N89H . . . MYO5C 55930 broad.mit.edu 36 15 50349269 50349269 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018728 exon8 c.G913T p.E305X . . . MYO5A 4644 broad.mit.edu 36 15 50468797 50468797 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000259 exon13 c.A1598G p.N533S . . . KIAA1370 56204 broad.mit.edu 36 15 50690626 50690626 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019600 exon5 c.C523A p.L175I . . . WDR72 256764 broad.mit.edu 36 15 51695241 51695241 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182758 exon15 c.C2454T p.H818H . . . WDR72 256764 broad.mit.edu 36 15 51802320 51802320 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182758 exon3 c.G231A p.Q77Q . . . UNC13C 440279 broad.mit.edu 36 15 52093223 52093223 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon1 c.C831A p.I277I . . . UNC13C 440279 broad.mit.edu 36 15 52095319 52095319 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon1 c.C2927T p.A976V . . . UNC13C 440279 broad.mit.edu 36 15 52329803 52329803 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon6 c.C3317T p.T1106I . . . UNC13C 440279 broad.mit.edu 36 15 52413346 52413346 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon14 c.G4584T p.K1528N . . . UNC13C 440279 broad.mit.edu 36 15 52612518 52612518 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080534 exon24 c.G5658T p.E1886D . . . RAB27A 5873 broad.mit.edu 36 15 53285143 53285143 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004580 exon6 c.A520C p.I174L . . . CCPG1 9236 broad.mit.edu 36 15 53439237 53439237 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020739 exon8 c.G2026A p.E676K . . . PRTG 283659 broad.mit.edu 36 15 53819908 53819908 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173814 exon2 c.G361A p.A121T . . . NEDD4 4734 broad.mit.edu 36 15 53927883 53927883 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006154 exon17 c.G1521T p.E507D . . . NEDD4 4734 broad.mit.edu 36 15 53942444 53942444 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006154 exon9 c.C633A p.N211K . . . RFX7 64864 broad.mit.edu 36 15 54175674 54175674 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022841 exon9 c.C1544T p.S515F . . . MNS1 55329 broad.mit.edu 36 15 54522967 54522967 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018365 exon7 c.G964T p.E322X . . . CGNL1 84952 broad.mit.edu 36 15 55518516 55518516 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032866 exon2 c.C1027T p.R343W . . . CGNL1 84952 broad.mit.edu 36 15 55596422 55596422 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032866 exon9 c.C2556T p.I852I . . . GCOM1 145781 broad.mit.edu 36 15 55719016 55719016 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152451 exon10 c.T1100G p.V367G . . . GCOM1 145781 broad.mit.edu 36 15 55794146 55794146 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018102 exon4 c.G613A p.D205N . . . ALDH1A2 8854 broad.mit.edu 36 15 56093447 56093447 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170696 exon3 c.C264A p.F88L . . . AQP9 366 broad.mit.edu 36 15 56246203 56246203 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020980 exon2 c.C151T p.R51X . . . AQP9 366 broad.mit.edu 36 15 56263478 56263478 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020980 exon6 c.C740A p.P247H . . . LIPC 3990 broad.mit.edu 36 15 56622120 56622120 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000236 exon4 c.G552A p.T184T . . . SLTM 79811 broad.mit.edu 36 15 56969783 56969783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024755 exon15 c.C2068T p.R690C . . . SLTM 79811 broad.mit.edu 36 15 56973464 56973464 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024755 exon12 c.T1496C p.V499A . . . FAM81A 145773 broad.mit.edu 36 15 57588358 57588358 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152450 exon6 c.C548A p.S183Y . . . GCNT3 9245 broad.mit.edu 36 15 57698687 57698687 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004751 exon3 c.G958T p.E320X . . . RORA 6095 broad.mit.edu 36 15 58583038 58583038 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134261 exon7 c.C1063A p.L355I . . . VPS13C 54832 broad.mit.edu 36 15 59960387 59960387 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017684 exon70 c.G9706A p.A3236T . . . VPS13C 54832 broad.mit.edu 36 15 60038189 60038189 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017684 exon35 c.G3946T p.D1316Y . . . USP3 9960 broad.mit.edu 36 15 61653377 61653377 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006537 exon10 c.G988A p.E330K . . . USP3 9960 broad.mit.edu 36 15 61668050 61668050 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006537 exon13 c.A1312G p.K438E . . . HERC1 8925 broad.mit.edu 36 15 61741046 61741046 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003922 exon45 c.C9129A p.Y3043X . . . HERC1 8925 broad.mit.edu 36 15 61828965 61828965 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003922 exon9 c.G1981T p.E661X . . . SNX1 6642 broad.mit.edu 36 15 62191871 62191871 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148955 exon2 c.A206T p.N69I . . . SNX22 79856 broad.mit.edu 36 15 62232569 62232569 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024798 exon4 c.G337T p.D113Y . . . CSNK1G1 53944 broad.mit.edu 36 15 62286790 62286790 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022048 exon7 c.C736T p.R246X . . . TRIP4 9325 broad.mit.edu 36 15 62480029 62480029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016213 exon5 c.G653A p.R218H . . . CILP 8483 broad.mit.edu 36 15 63277004 63277004 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003613 exon9 c.G2673A p.G891G . . . CILP 8483 broad.mit.edu 36 15 63283724 63283724 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003613 exon6 c.T854G p.I285S . . . DPP8 54878 broad.mit.edu 36 15 63535633 63535633 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_197961 exon17 c.G2149A p.A717T . . . DPP8 54878 broad.mit.edu 36 15 63558297 63558297 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_197961 exon12 c.G1478A p.R493Q . . . DENND4A 10260 broad.mit.edu 36 15 63831789 63831789 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144823 exon4 c.G543T p.K181N . . . DIS3L 115752 broad.mit.edu 36 15 64398002 64398002 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133375 exon8 c.A907G p.T303A . . . ZWILCH 55055 broad.mit.edu 36 15 64593455 64593455 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017975 exon3 c.G181T p.V61L . . . LCTL 197021 broad.mit.edu 36 15 64627886 64627886 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_207338 exon13 c.G1700A p.S567N . . . LCTL 197021 broad.mit.edu 36 15 64642991 64642991 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207338 exon4 c.G397A p.E133K . . . SMAD3 4088 broad.mit.edu 36 15 65269903 65269903 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145103 exon9 c.G1121T p.S374I . . . AAGAB 79719 broad.mit.edu 36 15 65288923 65288923 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024666 exon6 c.C549A p.G183G . . . AAGAB 79719 broad.mit.edu 36 15 65311278 65311278 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024666 exon5 c.G463T p.E155X . . . ITGA11 22801 broad.mit.edu 36 15 66411318 66411318 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004439 exon14 c.A1703G p.D568G . . . CORO2B 10391 broad.mit.edu 36 15 66793395 66793395 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006091 exon6 c.C726A p.V242V . . . CORO2B 10391 broad.mit.edu 36 15 66793975 66793975 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006091 exon7 c.C789T p.I263I . . . CORO2B 10391 broad.mit.edu 36 15 66798093 66798093 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006091 exon9 c.G970A p.V324I . . . SPESP1 246777 broad.mit.edu 36 15 67025544 67025544 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145658 exon2 c.C617A p.T206N . . . GLCE 26035 broad.mit.edu 36 15 67340669 67340669 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015554 exon4 c.C776T p.A259V . . . PAQR5 54852 broad.mit.edu 36 15 67476888 67476888 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001104554 exon7 c.C540A p.L180L . . . UACA 55075 broad.mit.edu 36 15 68748214 68748214 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018003 exon16 c.G1863A p.A621A . . . LRRC49 54839 broad.mit.edu 36 15 69059506 69059506 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199018 exon11 c.C802T p.R268C . . . LRRC49 54839 broad.mit.edu 36 15 69089266 69089266 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199018 exon14 c.C1342T p.R448C . . . MYO9A 4649 broad.mit.edu 36 15 69906338 69906338 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006901 exon42 c.C7284T p.V2428V . . . MYO9A 4649 broad.mit.edu 36 15 69977477 69977477 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006901 exon25 c.T4421G p.I1474S . . . TMEM202 338949 broad.mit.edu 36 15 70478182 70478182 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080462 exon2 c.C216T p.I72I . . . HCN4 10021 broad.mit.edu 36 15 71408983 71408983 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005477 exon4 c.G1574A p.R525H . . . PML 5371 broad.mit.edu 36 15 72077469 72077469 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033238 exon2 c.G201A p.P67P . . . ISLR 3671 broad.mit.edu 36 15 72254352 72254352 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201526 exon2 c.G100A p.A34T . . . ISLR 3671 broad.mit.edu 36 15 72254546 72254546 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201526 exon2 c.C294A p.S98R . . . EDC3 80153 broad.mit.edu 36 15 72751165 72751165 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025083 exon3 c.A168T p.A56A . . . C15orf39 56905 broad.mit.edu 36 15 73285730 73285730 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015492 exon2 c.G288A p.S96S . . . SIN3A 25942 broad.mit.edu 36 15 73455071 73455071 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145358 exon20 c.C3579T p.L1193L . . . SIN3A 25942 broad.mit.edu 36 15 73474096 73474096 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145358 exon14 c.A2255T p.E752V . . . SIN3A 25942 broad.mit.edu 36 15 73481331 73481331 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145358 exon10 c.G1441A p.E481K . . . PTPN9 5780 broad.mit.edu 36 15 73553106 73553106 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002833 exon10 c.C1185A p.V395V . . . SNX33 257364 broad.mit.edu 36 15 73729644 73729644 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153271 exon1 c.G1146T p.K382N . . . FBXO22 26263 broad.mit.edu 36 15 73996770 73996770 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012170 exon5 c.G608T p.R203I . . . FBXO22 26263 broad.mit.edu 36 15 74012269 74012269 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147188 exon7 c.G983T p.G328V . . . ETFA 2108 broad.mit.edu 36 15 74372087 74372087 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127716 exon2 c.G49T p.D17Y . . . SCAPER 49855 broad.mit.edu 36 15 74513637 74513637 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145923 exon26 c.A2410G p.T804A . . . SCAPER 49855 broad.mit.edu 36 15 74851170 74851170 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145923 exon10 c.G478T p.E160X . . . SCAPER 49855 broad.mit.edu 36 15 74941815 74941815 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020843 exon2 c.G121T p.D41Y . . . RCN2 5955 broad.mit.edu 36 15 75028529 75028529 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002902 exon7 c.C865A p.L289M . . . HMG20A 10363 broad.mit.edu 36 15 75557011 75557011 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018200 exon8 c.C675A p.F225L . . . LINGO1 84894 broad.mit.edu 36 15 75694656 75694656 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032808 exon2 c.C648T p.G216G . . . ACSBG1 23205 broad.mit.edu 36 15 76259025 76259025 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199377 exon10 c.G1394A p.R465H . . . ACSBG1 23205 broad.mit.edu 36 15 76262167 76262167 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199377 exon6 c.C667T p.P223S . . . ACSBG1 23205 broad.mit.edu 36 15 76313801 76313801 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199377 exon1 c.T98A p.I33N . . . IREB2 3658 broad.mit.edu 36 15 76542463 76542463 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004136 exon3 c.G251A p.R84H . . . CHRNA5 1138 broad.mit.edu 36 15 76667782 76667782 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000745 exon4 c.A375C p.S125S . . . KIAA1024 23251 broad.mit.edu 36 15 77535667 77535667 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015206 exon2 c.G123A p.S41S . . . KIAA1024 23251 broad.mit.edu 36 15 77536711 77536711 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015206 exon2 c.C1167T p.S389S . . . BCL2A1 597 broad.mit.edu 36 15 78050106 78050106 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004049 exon1 c.C411T p.N137N . . . FAH 2184 broad.mit.edu 36 15 78254472 78254472 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000137 exon10 c.C897A p.L299L . . . C15orf26 161502 broad.mit.edu 36 15 79214704 79214704 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173528 exon2 c.G108A p.G36G . . . C15orf26 161502 broad.mit.edu 36 15 79227316 79227316 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173528 exon6 c.T699C p.H233H . . . STARD5 80765 broad.mit.edu 36 15 79397822 79397822 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181900 exon5 c.C477T p.F159F . . . TMC3 342125 broad.mit.edu 36 15 79423315 79423315 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080532 exon14 c.T1645G p.F549V . . . EFTUD1 79631 broad.mit.edu 36 15 80231354 80231354 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024580 exon18 c.G2496A p.G832G . . . FAM154B 283726 broad.mit.edu 36 15 80362292 80362292 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008226 exon3 c.C1031A p.S344Y . . . CPEB1 64506 broad.mit.edu 36 15 81015377 81015377 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079535 exon7 c.C1062T p.V354V . . . WHAMM 123720 broad.mit.edu 36 15 81292633 81292633 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080435 exon8 c.G1622A p.R541Q . . . BNC1 646 broad.mit.edu 36 15 81717266 81717266 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001717 exon5 c.C2917T p.R973X . . . BNC1 646 broad.mit.edu 36 15 81722812 81722812 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001717 exon4 c.C2195A p.A732D . . . BNC1 646 broad.mit.edu 36 15 81723153 81723153 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001717 exon4 c.T1854A p.S618R . . . BNC1 646 broad.mit.edu 36 15 81723362 81723362 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001717 exon4 c.G1645T p.E549X . . . SH3GL3 6457 broad.mit.edu 36 15 82028321 82028321 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003027 exon4 c.C224T p.S75L . . . ADAMTSL3 57188 broad.mit.edu 36 15 82496711 82496711 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207517 exon29 c.C4937A p.S1646Y . . . WDR73 84942 broad.mit.edu 36 15 82990533 82990533 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032856 exon6 c.C403A p.L135I . . . SLC28A1 9154 broad.mit.edu 36 15 83239643 83239643 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201651 exon7 c.G492A p.P164P . . . PDE8A 5151 broad.mit.edu 36 15 83470530 83470530 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002605 exon20 c.C2174T p.A725V . . . AKAP13 11214 broad.mit.edu 36 15 84026418 84026418 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006738 exon15 c.C5139A p.F1713L . . . NTRK3 4916 broad.mit.edu 36 15 86471456 86471456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007156 exon11 c.G1234A p.E412K . . . NTRK3 4916 broad.mit.edu 36 15 86480840 86480840 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007156 exon7 c.T627C p.L209L . . . MRPL46 26589 broad.mit.edu 36 15 86809968 86809968 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022163 exon2 c.G269A p.R90H . . . ACAN 176 broad.mit.edu 36 15 87201979 87201979 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135 exon12 c.C5159A p.S1720Y . . . MFGE8 4240 broad.mit.edu 36 15 87250893 87250893 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005928 exon4 c.G508A p.D170N . . . POLG 5428 broad.mit.edu 36 15 87661056 87661056 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126131 exon23 c.C3650T p.A1217V . . . C15orf42 90381 broad.mit.edu 36 15 87920354 87920354 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152259 exon1 c.C533T p.A178V . . . C15orf42 90381 broad.mit.edu 36 15 87963967 87963967 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152259 exon18 c.G3044A p.R1015Q . . . C15orf42 90381 broad.mit.edu 36 15 87968371 87968371 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152259 exon20 c.C3826T p.R1276W . . . ANPEP 290 broad.mit.edu 36 15 88136489 88136489 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001150 exon18 c.G2434A p.A812T . . . AP3S2 10239 broad.mit.edu 36 15 88252595 88252595 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182616 exon3 c.C222T p.F74F . . . ZNF710 374655 broad.mit.edu 36 15 88411414 88411414 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198526 exon2 c.T41C p.V14A . . . IQGAP1 8826 broad.mit.edu 36 15 88797090 88797090 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003870 exon12 c.C1242T p.P414P . . . BLM 641 broad.mit.edu 36 15 89107256 89107256 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000057 exon8 c.C1939A p.L647I . . . ST8SIA2 8128 broad.mit.edu 36 15 90778590 90778590 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006011 exon3 c.A271G p.T91A . . . C15orf32 145858 broad.mit.edu 36 15 90816746 90816746 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153040 exon1 c.C364A p.L122I . . . CHD2 1106 broad.mit.edu 36 15 91337106 91337106 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001271 exon28 c.G3469T p.A1157S . . . FAM169B 283777 broad.mit.edu 36 15 96800467 96800467 + Missense_Mutation SNP C A A rs34036460 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182562 exon7 c.G495T p.K165N . . . PGPEP1L 145814 broad.mit.edu 36 15 97331908 97331908 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102612 exon3 c.G24A p.E8E . . . SYNM 23336 broad.mit.edu 36 15 97488882 97488882 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015286 exon4 c.G2793T p.T931T . . . LYSMD4 145748 broad.mit.edu 36 15 98089108 98089108 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152449 exon4 c.G237T p.Q79H . . . ADAMTS17 170691 broad.mit.edu 36 15 98332153 98332153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139057 exon22 c.C3265T p.R1089C . . . LASS3 204219 broad.mit.edu 36 15 98830654 98830654 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178842 exon10 c.G736A p.E246K . . . LASS3 204219 broad.mit.edu 36 15 98837769 98837769 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178842 exon7 c.G413A p.R138K . . . LINS 55180 broad.mit.edu 36 15 98927184 98927184 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040616 exon7 c.G2056T p.E686X . . . LINS 55180 broad.mit.edu 36 15 98931968 98931968 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040616 exon5 c.A633C p.E211D . . . LINS 55180 broad.mit.edu 36 15 98932743 98932743 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040616 exon4 c.C603A p.I201I . . . LRRK1 79705 broad.mit.edu 36 15 99369825 99369825 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024652 exon10 c.C1371A p.F457L . . . LRRK1 79705 broad.mit.edu 36 15 99415818 99415818 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024652 exon29 c.C4628T p.S1543F . . . LRRK1 79705 broad.mit.edu 36 15 99423415 99423415 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024652 exon32 c.C5250T p.V1750V . . . CHSY1 22856 broad.mit.edu 36 15 99535373 99535373 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014918 exon3 c.C2152T p.L718L . . . CHSY1 22856 broad.mit.edu 36 15 99535970 99535970 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014918 exon3 c.C1555T p.L519F . . . Unknown 0 broad.mit.edu 36 15 18903915 18903915 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POTEB 339010 broad.mit.edu 36 15 19307299 19307299 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 15 19967488 19967488 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 15 19984446 19984446 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SNORD116-4 100033416 broad.mit.edu 36 15 22879087 22879087 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SNORD116-4 100033416 broad.mit.edu 36 15 22890353 22890353 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SNORD116-4 100033416 broad.mit.edu 36 15 22897891 22897891 + RNA SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PAR4 347745 broad.mit.edu 36 15 22993865 22993865 + RNA SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SNORD115-43 100033817 broad.mit.edu 36 15 23043638 23043638 + 5'Flank SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBE3A 7337 broad.mit.edu 36 15 23153143 23153143 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OCA2 4948 broad.mit.edu 36 15 25937305 25937305 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TRPM1 4308 broad.mit.edu 36 15 29146693 29146693 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LPCAT4 254531 broad.mit.edu 36 15 32443811 32443811 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AQR 9716 broad.mit.edu 36 15 32939654 32939654 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . BUB1B 701 broad.mit.edu 36 15 38281893 38281893 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TP53BP1 7158 broad.mit.edu 36 15 41554258 41554258 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC28A2 9153 broad.mit.edu 36 15 43347146 43347146 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SEMA6D 80031 broad.mit.edu 36 15 45849974 45849974 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CEP152 22995 broad.mit.edu 36 15 46877145 46877145 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CEP152 22995 broad.mit.edu 36 15 46885149 46885149 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SHC4 399694 broad.mit.edu 36 15 46970306 46970306 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GABPB1 2553 broad.mit.edu 36 15 48389174 48389174 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . USP8 9101 broad.mit.edu 36 15 48563758 48563758 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRPM7 54822 broad.mit.edu 36 15 48703796 48703796 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYO5C 55930 broad.mit.edu 36 15 50331013 50331013 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NEDD4 4734 broad.mit.edu 36 15 53910087 53910087 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TEX9 374618 broad.mit.edu 36 15 54444940 54444940 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . USP3 9960 broad.mit.edu 36 15 61667687 61667687 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CLPX 10845 broad.mit.edu 36 15 63231933 63231933 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DIS3L 115752 broad.mit.edu 36 15 64408358 64408358 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TIPIN 54962 broad.mit.edu 36 15 64416585 64416585 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PKM2 5315 broad.mit.edu 36 15 70289066 70289066 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BBS4 585 broad.mit.edu 36 15 70814577 70814577 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TBC1D21 161514 broad.mit.edu 36 15 71960784 71960784 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IL16 3603 broad.mit.edu 36 15 79349056 79349056 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AP3B2 8120 broad.mit.edu 36 15 81132746 81132746 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SH3GL3 6457 broad.mit.edu 36 15 81950581 81950581 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AGBL1 123624 broad.mit.edu 36 15 85332333 85332333 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NTRK3 4916 broad.mit.edu 36 15 86284989 86284989 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NTRK3 4916 broad.mit.edu 36 15 86481801 86481801 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IQGAP1 8826 broad.mit.edu 36 15 88800376 88800376 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IGF1R 3480 broad.mit.edu 36 15 97277418 97277418 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C15orf51 196968 broad.mit.edu 36 15 98158785 98158785 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CLEC16A 23274 broad.mit.edu 36 16 11179760 11179760 + Silent SNP G T T rs61744091 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015226 exon23 c.G2874T p.T958T . . . TNP2 7142 broad.mit.edu 36 16 11270360 11270360 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005425 exon1 c.C261T p.N87N . . . PRM1 5619 broad.mit.edu 36 16 11282548 11282548 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002761 exon1 c.C49T p.R17C . . . TXNDC11 51061 broad.mit.edu 36 16 11680567 11680567 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015914 exon12 c.G2862T p.E954D . . . PARN 5073 broad.mit.edu 36 16 14484153 14484153 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002582 exon22 c.C1513T p.R505W . . . RRN3 54700 broad.mit.edu 36 16 15087749 15087749 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018427 exon4 c.T316G p.F106V . . . MYH11 4629 broad.mit.edu 36 16 15721012 15721012 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040114 exon36 c.C5034A p.I1678I . . . MYH11 4629 broad.mit.edu 36 16 15757813 15757813 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040114 exon15 c.G1656A p.T552T . . . ABCC1 4363 broad.mit.edu 36 16 16057478 16057478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019862 exon12 c.G1502A p.R501Q . . . ABCC1 4363 broad.mit.edu 36 16 16069553 16069553 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019862 exon13 c.G1717A p.E573K . . . ABCC6 368 broad.mit.edu 36 16 16210177 16210177 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171 exon7 c.G703T p.D235Y . . . SMG1 23049 broad.mit.edu 36 16 18748841 18748841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon53 c.G9041A p.R3014Q . . . SMG1 23049 broad.mit.edu 36 16 18754857 18754857 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015092 exon48 c.G7956A p.P2652P . . . CP110 9738 broad.mit.edu 36 16 19451255 19451255 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014711 exon4 c.G158T p.R53I . . . RPS2 6187 broad.mit.edu 36 16 1953211 1953211 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002952 exon4 c.G315A p.E105E . . . C16orf62 57020 broad.mit.edu 36 16 19587986 19587986 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020314 exon27 c.A2492C p.D831A . . . GPRC5B 51704 broad.mit.edu 36 16 19790745 19790745 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016235 exon2 c.C924T p.F308F . . . UMOD 7369 broad.mit.edu 36 16 20260071 20260071 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003361 exon7 c.G1420T p.G474C . . . PDILT 204474 broad.mit.edu 36 16 20303589 20303589 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174924 exon3 c.C288T p.I96I . . . ACSM2B 348158 broad.mit.edu 36 16 20474208 20474208 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105069 exon4 c.G480A p.G160G . . . ACSM1 116285 broad.mit.edu 36 16 20580644 20580644 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052956 exon6 c.G965A p.R322Q . . . ERI2 112479 broad.mit.edu 36 16 20709736 20709736 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080663 exon9 c.C752T p.S251L . . . ERI2 112479 broad.mit.edu 36 16 20718804 20718804 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080663 exon7 c.G619T p.E207X . . . LOC81691 81691 broad.mit.edu 36 16 20735014 20735014 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199053 exon5 c.G454A p.D152N . . . DNAH3 55567 broad.mit.edu 36 16 21023370 21023370 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017539 exon16 c.G2289A p.Q763Q . . . DNAH3 55567 broad.mit.edu 36 16 21059387 21059387 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017539 exon5 c.G667T p.E223X . . . TMEM159 57146 broad.mit.edu 36 16 21092938 21092938 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020422 exon4 c.C372A p.V124V . . . ZP2 7783 broad.mit.edu 36 16 21116328 21116328 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003460 exon19 c.G2212A p.E738K . . . ZP2 7783 broad.mit.edu 36 16 21120823 21120823 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003460 exon12 c.A1310G p.Y437C . . . ZP2 7783 broad.mit.edu 36 16 21121037 21121037 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003460 exon11 c.C1176T p.D392D . . . ZP2 7783 broad.mit.edu 36 16 21121952 21121952 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003460 exon10 c.C1094A p.S365Y . . . ZP2 7783 broad.mit.edu 36 16 21125681 21125681 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003460 exon5 c.C462A p.I154I . . . OTOA 146183 broad.mit.edu 36 16 21597861 21597861 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144672 exon3 c.G124T p.E42X . . . OTOA 146183 broad.mit.edu 36 16 21649749 21649749 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144672 exon20 c.A2298T p.T766T . . . OTOA 146183 broad.mit.edu 36 16 21655170 21655170 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144672 exon21 c.C2389T p.R797W . . . UQCRC2 7385 broad.mit.edu 36 16 21894998 21894998 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003366 exon12 c.G1057T p.A353S . . . USP31 57478 broad.mit.edu 36 16 22987077 22987077 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020718 exon16 c.A3850C p.N1284H . . . USP31 57478 broad.mit.edu 36 16 23021204 23021204 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020718 exon6 c.G1171A p.D391N . . . GGA2 23062 broad.mit.edu 36 16 23405554 23405554 + Nonsense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015044 exon7 c.T638G p.L213X . . . UBFD1 56061 broad.mit.edu 36 16 23489380 23489380 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019116 exon7 c.G898T p.D300Y . . . PRKCB 5579 broad.mit.edu 36 16 24133503 24133503 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002738 exon17 c.C1887T p.F629F . . . CACNG3 10368 broad.mit.edu 36 16 24280530 24280530 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006539 exon4 c.T793G p.F265V . . . TNRC6A 27327 broad.mit.edu 36 16 24696050 24696050 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014494 exon5 c.G459T p.Q153H . . . TNRC6A 27327 broad.mit.edu 36 16 24723555 24723555 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014494 exon13 c.A3866G p.N1289S . . . SLC5A11 115584 broad.mit.edu 36 16 24829298 24829298 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052944 exon15 c.C1821G p.S607R . . . ZKSCAN2 342357 broad.mit.edu 36 16 25159205 25159205 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012981 exon7 c.C2337T p.V779V . . . Unknown 0 broad.mit.edu 36 16 26986145 26986145 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145545 exon1 c.C328T p.R110W . . . PRSS27 83886 broad.mit.edu 36 16 2703577 2703577 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031948 exon5 c.A632G p.D211G . . . GTF3C1 2975 broad.mit.edu 36 16 27416618 27416618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001520 exon14 c.C2191T p.P731S . . . SRRM2 23524 broad.mit.edu 36 16 2752047 2752047 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016333 exon11 c.C1517A p.S506Y . . . SRRM2 23524 broad.mit.edu 36 16 2759047 2759047 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016333 exon12 c.T7782C p.R2594R . . . XPO6 23214 broad.mit.edu 36 16 28074903 28074903 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015171 exon7 c.G1090A p.D364N . . . ATP2A1 487 broad.mit.edu 36 16 28798339 28798339 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173201 exon3 c.G153T p.E51D . . . ATP2A1 487 broad.mit.edu 36 16 28821050 28821050 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173201 exon17 c.C2366T p.P789L . . . CD19 930 broad.mit.edu 36 16 28851806 28851806 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178098 exon3 c.C429T p.G143G . . . ASPHD1 253982 broad.mit.edu 36 16 29820083 29820083 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181718 exon1 c.G290A p.R97H . . . ASPHD1 253982 broad.mit.edu 36 16 29820629 29820629 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181718 exon1 c.G836A p.R279Q . . . TAOK2 9344 broad.mit.edu 36 16 29902387 29902387 + Silent SNP G A A rs61739161 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004783 exon13 c.G1323A p.P441P . . . HIRIP3 8479 broad.mit.edu 36 16 29913298 29913298 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003609 exon4 c.T669G p.S223R . . . MAPK3 5595 broad.mit.edu 36 16 30036014 30036014 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002746 exon6 c.T869C p.V290A . . . THOC6 79228 broad.mit.edu 36 16 3016525 3016525 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024339 exon7 c.C419T p.S140F . . . CD2BP2 10421 broad.mit.edu 36 16 30273104 30273104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006110 exon3 c.G119A p.R40H . . . ITGAL 3683 broad.mit.edu 36 16 30440380 30440380 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114380 exon29 c.C3154A p.P1052T . . . IL32 9235 broad.mit.edu 36 16 3059041 3059041 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004221 exon7 c.G251A p.G84D . . . SRCAP 10847 broad.mit.edu 36 16 30643028 30643028 + Missense_Mutation SNP G T T rs9652695 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006662 exon25 c.G4782T p.Q1594H . . . SRCAP 10847 broad.mit.edu 36 16 30655213 30655213 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006662 exon32 c.A6921G p.E2307E . . . PHKG2 5261 broad.mit.edu 36 16 30670043 30670043 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172432 exon3 c.C211T p.R71W . . . RNF40 9810 broad.mit.edu 36 16 30682066 30682066 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014771 exon3 c.G259T p.D87Y . . . RNF40 9810 broad.mit.edu 36 16 30684089 30684089 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014771 exon7 c.C858T p.I286I . . . PRSS8 5652 broad.mit.edu 36 16 31051022 31051022 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002773 exon6 c.A841G p.I281V . . . PRSS36 146547 broad.mit.edu 36 16 31058046 31058046 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173502 exon15 c.C2482A p.L828I . . . ZNF205 7755 broad.mit.edu 36 16 3109812 3109812 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042428 exon7 c.C1150T p.R384C . . . ZNF267 10308 broad.mit.edu 36 16 31803394 31803394 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon2 c.G78T p.K26N . . . ZNF267 10308 broad.mit.edu 36 16 31833475 31833475 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.A404C p.K135T . . . ZNF267 10308 broad.mit.edu 36 16 31833710 31833710 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.G639T p.E213D . . . ZNF267 10308 broad.mit.edu 36 16 31834014 31834014 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.A943C p.I315L . . . ZNF267 10308 broad.mit.edu 36 16 31834354 31834354 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003414 exon4 c.G1283A p.R428Q . . . ZNF267 10308 broad.mit.edu 36 16 31835026 31835026 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003414 exon4 c.G1955T p.R652I . . . MEFV 4210 broad.mit.edu 36 16 3237167 3237167 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000243 exon5 c.C1437A p.F479L . . . AXIN1 8312 broad.mit.edu 36 16 336835 336835 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003502 exon2 c.G192A p.S64S . . . NLRC3 197358 broad.mit.edu 36 16 3546965 3546965 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178844 exon8 c.G2131A p.A711T . . . SLX4 84464 broad.mit.edu 36 16 3580649 3580649 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032444 exon12 c.G2991A p.P997P . . . SLX4 84464 broad.mit.edu 36 16 3581201 3581201 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032444 exon12 c.G2439T p.E813D . . . CREBBP 1387 broad.mit.edu 36 16 3721828 3721828 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079846 exon28 c.T4726C p.S1576P . . . CREBBP 1387 broad.mit.edu 36 16 3729694 3729694 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079846 exon24 c.T4052C p.F1351S . . . CREBBP 1387 broad.mit.edu 36 16 3840827 3840827 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079846 exon2 c.C270T p.S90S . . . VPS35 55737 broad.mit.edu 36 16 45260365 45260365 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018206 exon13 c.G1625A p.R542Q . . . C16orf87 388272 broad.mit.edu 36 16 45394406 45394406 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001436 exon4 c.G424T p.E142X . . . PHKB 5257 broad.mit.edu 36 16 46088826 46088826 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001031835 exon3 c.C71A p.P24H . . . PHKB 5257 broad.mit.edu 36 16 46257356 46257356 + Missense_Mutation SNP C T T rs17413450 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031835 exon26 c.C2318T p.S773L . . . ABCC12 94160 broad.mit.edu 36 16 46675461 46675461 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033226 exon28 c.G3853A p.A1285T . . . ABCC12 94160 broad.mit.edu 36 16 46702884 46702884 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033226 exon16 c.G2245T p.E749X . . . ABCC12 94160 broad.mit.edu 36 16 46732165 46732165 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033226 exon4 c.G591A p.A197A . . . CBLN1 869 broad.mit.edu 36 16 47870971 47870971 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004352 exon3 c.G427A p.A143T . . . UBN1 29855 broad.mit.edu 36 16 4848612 4848612 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016936 exon3 c.G379A p.D127N . . . PPL 5493 broad.mit.edu 36 16 4875681 4875681 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002705 exon22 c.C2976T p.Y992Y . . . CYLD 1540 broad.mit.edu 36 16 49341588 49341588 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015247 exon4 c.G478A p.G160R . . . SALL1 6299 broad.mit.edu 36 16 49730650 49730650 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002968 exon2 c.G2984A p.R995Q . . . SALL1 6299 broad.mit.edu 36 16 49731399 49731399 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002968 exon2 c.G2235A p.T745T . . . SALL1 6299 broad.mit.edu 36 16 49732807 49732807 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002968 exon2 c.G827A p.R276Q . . . SEC14L5 9717 broad.mit.edu 36 16 4998625 4998625 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014692 exon14 c.T1775C p.V592A . . . FAM86A 196483 broad.mit.edu 36 16 5085471 5085471 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201400 exon2 c.C142T p.R48W . . . CHD9 80205 broad.mit.edu 36 16 51817836 51817836 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025134 exon5 c.A1954C p.K652Q . . . CHD9 80205 broad.mit.edu 36 16 51899198 51899198 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025134 exon33 c.C6885A p.F2295L . . . CHD9 80205 broad.mit.edu 36 16 51909662 51909662 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025134 exon37 c.G7574T p.R2525I . . . RBL2 5934 broad.mit.edu 36 16 52034078 52034078 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005611 exon3 c.G379A p.E127K . . . RPGRIP1L 23322 broad.mit.edu 36 16 52250205 52250205 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127897 exon11 c.C1330T p.R444C . . . IRX6 79190 broad.mit.edu 36 16 53918782 53918782 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024335 exon3 c.C377T p.P126L . . . LPCAT2 54947 broad.mit.edu 36 16 54170561 54170561 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017839 exon13 c.G1354T p.E452X . . . SLC6A2 6530 broad.mit.edu 36 16 54248278 54248278 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172504 exon1 c.G171A p.E57E . . . SLC6A2 6530 broad.mit.edu 36 16 54291645 54291645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172504 exon12 c.G1684A p.A562T . . . CES1 1066 broad.mit.edu 36 16 54401939 54401939 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025194 exon11 c.A1306C p.N436H . . . CES5A 221223 broad.mit.edu 36 16 54437980 54437980 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143685 exon13 c.T1612G p.F538V . . . CES5A 221223 broad.mit.edu 36 16 54441103 54441103 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143685 exon11 c.G1357A p.D453N . . . CES5A 221223 broad.mit.edu 36 16 54451048 54451048 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143685 exon8 c.C968A p.P323H . . . GNAO1 2775 broad.mit.edu 36 16 54942827 54942827 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020988 exon7 c.G754A p.D252N . . . NUDT21 11051 broad.mit.edu 36 16 55039322 55039322 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007006 exon2 c.G197A p.R66H . . . BBS2 583 broad.mit.edu 36 16 55094211 55094211 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031885 exon8 c.G815A p.R272Q . . . MT1B 4490 broad.mit.edu 36 16 55244474 55244474 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005947 exon3 c.C182G p.A61G . . . CETP 1071 broad.mit.edu 36 16 55561057 55561057 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000078 exon4 c.C402T p.I134I . . . CETP 1071 broad.mit.edu 36 16 55572606 55572606 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000078 exon12 c.G1182T p.K394N . . . NLRC5 84166 broad.mit.edu 36 16 55618368 55618368 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032206 exon6 c.G2012T p.G671V . . . NLRC5 84166 broad.mit.edu 36 16 55619791 55619791 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032206 exon8 c.G2236T p.E746X . . . COQ9 57017 broad.mit.edu 36 16 56042592 56042592 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020312 exon2 c.T213C p.P71P . . . GPR114 221188 broad.mit.edu 36 16 56159431 56159431 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153837 exon9 c.C984T p.C328C . . . GPR114 221188 broad.mit.edu 36 16 56166855 56166855 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153837 exon12 c.C1491A p.F497L . . . CNOT1 23019 broad.mit.edu 36 16 57114802 57114802 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016284 exon47 c.C6890T p.T2297M . . . CNOT1 23019 broad.mit.edu 36 16 57117407 57117407 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016284 exon45 c.G6590A p.R2197H . . . CNOT1 23019 broad.mit.edu 36 16 57125625 57125625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016284 exon40 c.G5822A p.R1941Q . . . CNOT1 23019 broad.mit.edu 36 16 57128617 57128617 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016284 exon39 c.A5423G p.Q1808R . . . CNOT1 23019 broad.mit.edu 36 16 57135109 57135109 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206999 exon31 c.G4337A p.R1446H . . . CNOT1 23019 broad.mit.edu 36 16 57142588 57142588 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206999 exon24 c.G3291T p.E1097D . . . CNOT1 23019 broad.mit.edu 36 16 57170341 57170341 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206999 exon13 c.G1347T p.K449N . . . CMTM1 113540 broad.mit.edu 36 16 65170314 65170314 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181271 exon3 c.G278T p.R93I . . . CDH16 1014 broad.mit.edu 36 16 65507749 65507749 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004062 exon4 c.G214A p.D72N . . . CES3 23491 broad.mit.edu 36 16 65563823 65563823 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185177 exon11 c.A1355C p.K452T . . . C16orf70 80262 broad.mit.edu 36 16 65722695 65722695 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025187 exon4 c.C237T p.I79I . . . PLEKHG4 25894 broad.mit.edu 36 16 65871629 65871629 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129727 exon3 c.C181A p.L61I . . . PLEKHG4 25894 broad.mit.edu 36 16 65879308 65879308 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129727 exon20 c.G3110A p.R1037H . . . KCTD19 146212 broad.mit.edu 36 16 65890955 65890955 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100915 exon6 c.T798G p.C266W . . . KCTD19 146212 broad.mit.edu 36 16 65912215 65912215 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100915 exon2 c.T78C p.V26V . . . TPPP3 51673 broad.mit.edu 36 16 65981713 65981713 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016140 exon5 c.G396A p.T132T . . . CTCF 10664 broad.mit.edu 36 16 66208230 66208230 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006565 exon5 c.A1034G p.H345R . . . C16orf48 84080 broad.mit.edu 36 16 66254599 66254599 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032140 exon7 c.C1007A p.S336Y . . . THAP11 57215 broad.mit.edu 36 16 66434734 66434734 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020457 exon1 c.G776A p.R259H . . . NFATC3 4775 broad.mit.edu 36 16 66758296 66758296 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173163 exon5 c.C1651T p.R551X . . . NFATC3 4775 broad.mit.edu 36 16 66782934 66782934 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173163 exon9 c.C2861A p.S954Y . . . ESRP2 80004 broad.mit.edu 36 16 66823660 66823660 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024939 exon9 c.G987T p.K329N . . . PRMT7 54496 broad.mit.edu 36 16 66916088 66916088 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019023 exon5 c.A134G p.N45S . . . ZFP90 146198 broad.mit.edu 36 16 67154691 67154691 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133458 exon4 c.A500G p.N167S . . . CDH3 1001 broad.mit.edu 36 16 67287309 67287309 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001793 exon15 c.C2262T p.I754I . . . TMCO7 79613 broad.mit.edu 36 16 67472006 67472006 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024562 exon7 c.T1349A p.L450H . . . HAS3 3038 broad.mit.edu 36 16 67705997 67705997 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005329 exon4 c.G989A p.R330Q . . . CIRH1A 84916 broad.mit.edu 36 16 67742017 67742017 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032830 exon7 c.G815T p.S272I . . . COG8 84342 broad.mit.edu 36 16 67926513 67926513 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032382 exon3 c.C825T p.I275I . . . COG8 84342 broad.mit.edu 36 16 67928043 67928043 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032382 exon2 c.G451T p.E151X . . . NIP7 51388 broad.mit.edu 36 16 67932602 67932602 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016101 exon4 c.C301T p.P101S . . . NFAT5 10725 broad.mit.edu 36 16 68261427 68261427 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138714 exon9 c.C1134A p.S378R . . . NFAT5 10725 broad.mit.edu 36 16 68283861 68283861 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138714 exon14 c.T2350G p.L784V . . . NFAT5 10725 broad.mit.edu 36 16 68284090 68284090 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138714 exon14 c.C2579T p.S860F . . . NFAT5 10725 broad.mit.edu 36 16 68285087 68285087 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138714 exon14 c.T3576G p.I1192M . . . WWP2 11060 broad.mit.edu 36 16 68509279 68509279 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007014 exon11 c.C1171A p.L391I . . . WWP2 11060 broad.mit.edu 36 16 68523257 68523257 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199424 exon6 c.C328T p.R110C . . . WWP2 11060 broad.mit.edu 36 16 68528987 68528987 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199424 exon11 c.C957T p.S319S . . . PDPR 55066 broad.mit.edu 36 16 68730392 68730392 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017990 exon11 c.G1280A p.R427H . . . AARS 16 broad.mit.edu 36 16 68850472 68850472 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001605 exon14 c.G1904T p.R635I . . . DDX19B 11269 broad.mit.edu 36 16 68917047 68917047 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014449 exon5 c.T235A p.F79I . . . DDX19A 55308 broad.mit.edu 36 16 68962801 68962801 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018332 exon11 c.C1209T p.V403V . . . COG4 25839 broad.mit.edu 36 16 69099818 69099818 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015386 exon8 c.C1053T p.I351I . . . SF3B3 23450 broad.mit.edu 36 16 69151931 69151931 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012426 exon16 c.G2069A p.R690H . . . HYDIN 54768 broad.mit.edu 36 16 69424322 69424322 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon80 c.A13826G p.Y4609C . . . HYDIN 54768 broad.mit.edu 36 16 69457603 69457603 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon67 c.A11438G p.E3813G . . . HYDIN 54768 broad.mit.edu 36 16 69495151 69495151 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon52 c.C8724A p.S2908R . . . HYDIN 54768 broad.mit.edu 36 16 69512566 69512566 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon46 c.C7211A p.S2404Y . . . HYDIN 54768 broad.mit.edu 36 16 69530033 69530033 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon44 c.G6977A p.R2326H . . . HYDIN 54768 broad.mit.edu 36 16 69546936 69546936 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon40 c.C6156T p.A2052A . . . HYDIN 54768 broad.mit.edu 36 16 69551221 69551221 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon39 c.A5969G p.D1990G . . . HYDIN 54768 broad.mit.edu 36 16 69565942 69565942 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon32 c.G4902T p.E1634D . . . HYDIN 54768 broad.mit.edu 36 16 69570338 69570338 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon30 c.C4615T p.P1539S . . . HYDIN 54768 broad.mit.edu 36 16 69579361 69579361 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032821 exon27 c.C4158A p.S1386S . . . CALB2 794 broad.mit.edu 36 16 69969130 69969130 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007088 exon4 c.C321T p.G107G . . . ZNF19 7567 broad.mit.edu 36 16 70066905 70066905 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006961 exon6 c.G1046T p.R349I . . . DHX38 9785 broad.mit.edu 36 16 70703822 70703822 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014003 exon27 c.G3609T p.K1203N . . . ZFHX3 463 broad.mit.edu 36 16 71551362 71551362 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006885 exon2 c.G184A p.A62T . . . GLG1 2734 broad.mit.edu 36 16 73048101 73048101 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145666 exon24 c.G3286A p.E1096K . . . WDR59 79726 broad.mit.edu 36 16 73481212 73481212 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030581 exon21 c.T2085G p.V695V . . . ZFP1 162239 broad.mit.edu 36 16 73761046 73761046 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153688 exon4 c.C537A p.N179K . . . ZFP1 162239 broad.mit.edu 36 16 73761120 73761120 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153688 exon4 c.G611T p.R204I . . . ZFP1 162239 broad.mit.edu 36 16 73761372 73761372 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153688 exon4 c.G863T p.R288I . . . CNTNAP4 85445 broad.mit.edu 36 16 75112668 75112668 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033401 exon16 c.G2495T p.R832I . . . ADAMTS18 170692 broad.mit.edu 36 16 75882766 75882766 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199355 exon21 c.G3300T p.K1100N . . . ADAMTS18 170692 broad.mit.edu 36 16 75947456 75947456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199355 exon9 c.G1342A p.G448R . . . ADAMTS18 170692 broad.mit.edu 36 16 75958975 75958975 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199355 exon4 c.C642A p.Y214X . . . ADAMTS18 170692 broad.mit.edu 36 16 76022921 76022921 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199355 exon3 c.G267A p.S89S . . . NUDT7 283927 broad.mit.edu 36 16 76333277 76333277 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105663 exon4 c.C646A p.L216I . . . VAT1L 57687 broad.mit.edu 36 16 76416655 76416655 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020927 exon3 c.T375G p.R125R . . . CDYL2 124359 broad.mit.edu 36 16 79224628 79224628 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152342 exon3 c.C623A p.A208D . . . CDYL2 124359 broad.mit.edu 36 16 79276142 79276142 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152342 exon2 c.A410G p.Y137C . . . ATMIN 23300 broad.mit.edu 36 16 79634830 79634830 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015251 exon4 c.C1226A p.S409Y . . . PKD1L2 114780 broad.mit.edu 36 16 79692310 79692310 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052892 exon43 c.G7298T p.S2433I . . . PKD1L2 114780 broad.mit.edu 36 16 79708479 79708479 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052892 exon39 c.G6770A p.R2257K . . . PKD1L2 114780 broad.mit.edu 36 16 79738518 79738518 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052892 exon30 c.G5074A p.A1692T . . . PKD1L2 114780 broad.mit.edu 36 16 79739345 79739345 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052892 exon29 c.G4872T p.K1624N . . . BCMO1 53630 broad.mit.edu 36 16 79881561 79881561 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017429 exon11 c.G1522A p.D508N . . . GAN 8139 broad.mit.edu 36 16 79968685 79968685 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022041 exon11 c.C1777T p.R593C . . . PLCG2 5336 broad.mit.edu 36 16 80527434 80527434 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002661 exon27 c.G3002A p.R1001H . . . CDH13 1012 broad.mit.edu 36 16 81808592 81808592 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001257 exon5 c.G625A p.A209T . . . CDH13 1012 broad.mit.edu 36 16 82077705 82077705 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001257 exon7 c.G904A p.D302N . . . KCNG4 93107 broad.mit.edu 36 16 82827898 82827898 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172347 exon2 c.C695T p.A232V . . . USP10 9100 broad.mit.edu 36 16 83351048 83351048 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005153 exon7 c.G1445T p.R482L . . . FOXL1 2300 broad.mit.edu 36 16 85170153 85170153 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005250 exon1 c.T323C p.V108A . . . C16orf68 79091 broad.mit.edu 36 16 8643861 8643861 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024109 exon9 c.G948A p.T316T . . . ABAT 18 broad.mit.edu 36 16 8774262 8774262 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127448 exon12 c.A941G p.D314G . . . ZNF778 197320 broad.mit.edu 36 16 87820691 87820691 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182531 exon6 c.G410T p.R137I . . . SPG7 6687 broad.mit.edu 36 16 88118047 88118047 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003119 exon4 c.T509C p.F170S . . . NPRL3 8131 broad.mit.edu 36 16 88266 88266 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039476 exon6 c.G264T p.E88D . . . USP7 7874 broad.mit.edu 36 16 8903753 8903753 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003470 exon17 c.G1927A p.D643N . . . GRIN2A 2903 broad.mit.edu 36 16 9765750 9765750 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134408 exon13 c.A3152G p.Y1051C . . . C16orf62 57020 broad.mit.edu 36 16 19547452 19547452 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ERI2 112479 broad.mit.edu 36 16 20721757 20721757 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNAH3 55567 broad.mit.edu 36 16 21055140 21055140 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VWA3A 146177 broad.mit.edu 36 16 22057343 22057343 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ABCA3 21 broad.mit.edu 36 16 2293963 2293963 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PALB2 79728 broad.mit.edu 36 16 23541781 23541781 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CHP2 63928 broad.mit.edu 36 16 23675022 23675022 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TNRC6A 27327 broad.mit.edu 36 16 24734138 24734138 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STX4 6810 broad.mit.edu 36 16 30958630 30958630 + 3'UTR SNP G A A rs34576482 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BCKDK 10295 broad.mit.edu 36 16 31029909 31029909 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CLUAP1 23059 broad.mit.edu 36 16 3494836 3494836 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LONP2 83752 broad.mit.edu 36 16 46868744 46868744 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . N4BP1 9683 broad.mit.edu 36 16 47139527 47139527 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NKD1 85407 broad.mit.edu 36 16 49216885 49216885 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C16orf89 146556 broad.mit.edu 36 16 5037978 5037978 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MMP2 4313 broad.mit.edu 36 16 54094184 54094184 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CES5A 221223 broad.mit.edu 36 16 54454756 54454756 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MT1G 4495 broad.mit.edu 36 16 55258802 55258802 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NUP93 9688 broad.mit.edu 36 16 55421935 55421935 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC12A3 6559 broad.mit.edu 36 16 55504819 55504819 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CNGB1 1258 broad.mit.edu 36 16 56540751 56540751 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LOC283867 283867 broad.mit.edu 36 16 63876814 63876814 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CES4A 283848 broad.mit.edu 36 16 65594467 65594467 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HYDIN 54768 broad.mit.edu 36 16 69509839 69509839 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HYDIN 54768 broad.mit.edu 36 16 69721039 69721039 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIAA0174 9798 broad.mit.edu 36 16 70513873 70513873 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TXNL4B 54957 broad.mit.edu 36 16 70678031 70678031 + 3'UTR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADAMTS18 170692 broad.mit.edu 36 16 75886535 75886535 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SPATA22 84690 broad.mit.edu 36 17 3290261 3290262 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170697 exon9 c.1022_1023insA p.T341fs . . . MYH13 8735 broad.mit.edu 36 17 10156735 10156735 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003802 exon31 c.G4246A p.A1416T . . . MYH8 4626 broad.mit.edu 36 17 10236648 10236648 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002472 exon38 c.G5504A p.R1835H . . . MYH8 4626 broad.mit.edu 36 17 10250847 10250847 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002472 exon19 c.G2056A p.A686T . . . MYH8 4626 broad.mit.edu 36 17 10256756 10256756 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002472 exon13 c.G1162T p.A388S . . . MYH8 4626 broad.mit.edu 36 17 10259531 10259531 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002472 exon7 c.G631A p.E211K . . . MYH8 4626 broad.mit.edu 36 17 10262784 10262784 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002472 exon5 c.G414A p.K138K . . . MYH4 4622 broad.mit.edu 36 17 10289143 10289143 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017533 exon37 c.G5341A p.A1781T . . . MYH4 4622 broad.mit.edu 36 17 10299888 10299888 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017533 exon18 c.G2024A p.R675Q . . . MYH1 4619 broad.mit.edu 36 17 10341410 10341410 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005963 exon32 c.G4450T p.E1484X . . . MYH1 4619 broad.mit.edu 36 17 10345722 10345722 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005963 exon26 c.G3262T p.E1088X . . . MYH1 4619 broad.mit.edu 36 17 10345854 10345854 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005963 exon25 c.A3211G p.M1071V . . . MYH1 4619 broad.mit.edu 36 17 10360329 10360329 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005963 exon4 c.A260C p.K87T . . . MYH2 4620 broad.mit.edu 36 17 10373939 10373939 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon23 c.G2875T p.D959Y . . . MYH2 4620 broad.mit.edu 36 17 10379117 10379117 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon19 c.G2178A p.Q726Q . . . MYH2 4620 broad.mit.edu 36 17 10379405 10379405 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100112 exon18 c.G1977T p.E659D . . . C17orf48 56985 broad.mit.edu 36 17 10554979 10554979 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020233 exon4 c.C822A p.F274L . . . TUSC5 286753 broad.mit.edu 36 17 1130189 1130189 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172367 exon1 c.G144A p.S48S . . . DNAH9 1770 broad.mit.edu 36 17 11473575 11473575 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon7 c.G1467A p.M489I . . . DNAH9 1770 broad.mit.edu 36 17 11496874 11496874 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon14 c.G2425T p.D809Y . . . DNAH9 1770 broad.mit.edu 36 17 11508964 11508964 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon15 c.C2685A p.F895L . . . DNAH9 1770 broad.mit.edu 36 17 11513810 11513810 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon17 c.G3327T p.Q1109H . . . DNAH9 1770 broad.mit.edu 36 17 11548418 11548418 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon25 c.G5325T p.K1775N . . . DNAH9 1770 broad.mit.edu 36 17 11549088 11549088 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon26 c.C5413A p.L1805I . . . DNAH9 1770 broad.mit.edu 36 17 11627707 11627707 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001372 exon40 c.T7738C p.S2580P . . . MAP2K4 6416 broad.mit.edu 36 17 11969382 11969382 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003010 exon8 c.G860A p.R287H . . . MYOCD 93649 broad.mit.edu 36 17 12607359 12607359 + Silent SNP C T T rs28730829 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146312 exon14 c.C2634T p.S878S . . . INPP5K 51763 broad.mit.edu 36 17 1348156 1348156 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016532 exon8 c.C787T p.R263C . . . PRPF8 10594 broad.mit.edu 36 17 1506523 1506523 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006445 exon36 c.C5706T p.F1902F . . . TEKT3 64518 broad.mit.edu 36 17 15175456 15175456 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031898 exon3 c.G172T p.V58F . . . PRPF8 10594 broad.mit.edu 36 17 1531681 1531681 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006445 exon6 c.C707T p.S236L . . . ZNF286A 57335 broad.mit.edu 36 17 15560968 15560968 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020652 exon6 c.G1205T p.R402I . . . ZNF286A 57335 broad.mit.edu 36 17 15561136 15561136 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020652 exon6 c.G1373T p.R458I . . . NCOR1 9611 broad.mit.edu 36 17 15909729 15909729 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190440 exon32 c.G4794A p.A1598A . . . SERPINF1 5176 broad.mit.edu 36 17 1621130 1621130 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002615 exon4 c.G341A p.S114N . . . SERPINF1 5176 broad.mit.edu 36 17 1626641 1626641 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002615 exon7 c.G852T p.Q284H . . . ZNF624 57547 broad.mit.edu 36 17 16468073 16468073 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020787 exon6 c.C852T p.A284A . . . TNFRSF13B 23495 broad.mit.edu 36 17 16796497 16796497 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012452 exon2 c.G187A p.A63T . . . TOM1L2 146691 broad.mit.edu 36 17 17728725 17728725 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082968 exon5 c.A449C p.E150A . . . FLII 2314 broad.mit.edu 36 17 18089811 18089811 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002018 exon27 c.G3475A p.E1159K . . . SMCR8 140775 broad.mit.edu 36 17 18160222 18160222 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144775 exon1 c.G394A p.A132T . . . TBC1D28 254272 broad.mit.edu 36 17 18481950 18481950 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039397 exon9 c.G449T p.S150I . . . TBC1D28 254272 broad.mit.edu 36 17 18482422 18482422 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039397 exon8 c.G316A p.V106M . . . TRIM16L 147166 broad.mit.edu 36 17 18571639 18571639 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037330 exon2 c.C44T p.A15V . . . FBXW10 10517 broad.mit.edu 36 17 18622573 18622573 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031456 exon14 c.G2393T p.S798I . . . SMG6 23293 broad.mit.edu 36 17 1915553 1915553 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170957 exon17 c.G3913A p.E1305K . . . SLC47A1 55244 broad.mit.edu 36 17 19393550 19393550 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018242 exon5 c.A466G p.T156A . . . ALDH3A2 224 broad.mit.edu 36 17 19500274 19500274 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031806 exon4 c.C475A p.L159I . . . LGALS9B 284194 broad.mit.edu 36 17 20302187 20302187 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042685 exon3 c.G234T p.Q78H . . . TSR1 55720 broad.mit.edu 36 17 2182214 2182214 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018128 exon8 c.C1495T p.R499X . . . TSR1 55720 broad.mit.edu 36 17 2184702 2184702 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018128 exon5 c.G795T p.E265D . . . METT10D 79066 broad.mit.edu 36 17 2288190 2288190 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024086 exon8 c.C851T p.A284V . . . NOS2 4843 broad.mit.edu 36 17 23140083 23140083 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000625 exon4 c.A197T p.K66M . . . TNFAIP1 7126 broad.mit.edu 36 17 23693431 23693431 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021137 exon6 c.G550A p.E184K . . . SEBOX 645832 broad.mit.edu 36 17 23715698 23715698 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080837 exon3 c.G370A p.D124N . . . VTN 7448 broad.mit.edu 36 17 23720038 23720038 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000638 exon5 c.C808T p.R270W . . . SLC13A2 9058 broad.mit.edu 36 17 23842926 23842926 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145976 exon5 c.C678T p.F226F . . . SPAG5 10615 broad.mit.edu 36 17 23936688 23936688 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006461 exon8 c.G1851T p.Q617H . . . SPAG5 10615 broad.mit.edu 36 17 23944201 23944201 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006461 exon3 c.A188G p.N63S . . . SGK494 124923 broad.mit.edu 36 17 23964288 23964288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174103 exon4 c.G412A p.V138M . . . KIAA0100 9703 broad.mit.edu 36 17 23990491 23990491 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014680 exon11 c.A1198C p.S400R . . . RAB34 83871 broad.mit.edu 36 17 24066233 24066233 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142625 exon9 c.C722G p.A241G . . . NEK8 284086 broad.mit.edu 36 17 24089844 24089844 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178170 exon9 c.C1251T p.S417S . . . SEZ6 124925 broad.mit.edu 36 17 24333050 24333050 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178860 exon2 c.C189A p.T63T . . . PIPOX 51268 broad.mit.edu 36 17 24406353 24406353 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016518 exon6 c.C954A p.S318R . . . MYO18A 399687 broad.mit.edu 36 17 24462894 24462894 + Nonsense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203318 exon16 c.T2712G p.Y904X . . . TAOK1 57551 broad.mit.edu 36 17 24846811 24846811 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020791 exon11 c.G939T p.K313N . . . TAOK1 57551 broad.mit.edu 36 17 24885385 24885385 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020791 exon19 c.C2485T p.R829X . . . EFCAB5 374786 broad.mit.edu 36 17 25351118 25351118 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145053 exon7 c.G874T p.E292X . . . EFCAB5 374786 broad.mit.edu 36 17 25404479 25404479 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145053 exon10 c.T1213G p.F405V . . . EFCAB5 374786 broad.mit.edu 36 17 25404950 25404950 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145053 exon10 c.C1684T p.R562X . . . SLC6A4 6532 broad.mit.edu 36 17 25561686 25561686 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045 exon11 c.C1422A p.F474L . . . BLMH 642 broad.mit.edu 36 17 25600284 25600284 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000386 exon12 c.C1245A p.F415L . . . BLMH 642 broad.mit.edu 36 17 25625274 25625274 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000386 exon7 c.A713G p.K238R . . . CPD 1362 broad.mit.edu 36 17 25793569 25793569 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199775 exon10 c.G1607T p.R536I . . . CPD 1362 broad.mit.edu 36 17 25796917 25796917 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199775 exon12 c.G1885T p.D629Y . . . ATAD5 79915 broad.mit.edu 36 17 26186247 26186247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024857 exon2 c.G1022A p.R341Q . . . ATAD5 79915 broad.mit.edu 36 17 26211718 26211718 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024857 exon10 c.G3098T p.R1033I . . . NF1 4763 broad.mit.edu 36 17 26700285 26700285 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000267 exon48 c.C7148T p.A2383V . . . LRRC37B 114659 broad.mit.edu 36 17 27373820 27373820 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052888 exon1 c.C1542T p.A514A . . . C17orf75 64149 broad.mit.edu 36 17 27682918 27682918 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022344 exon10 c.G1168A p.E390K . . . PSMD11 5717 broad.mit.edu 36 17 27815665 27815665 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002815 exon5 c.C404A p.S135Y . . . MYO1D 4642 broad.mit.edu 36 17 28072246 28072246 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015194 exon15 c.G1821A p.R607R . . . TMEM98 26022 broad.mit.edu 36 17 28287543 28287543 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033504 exon5 c.C378T p.S126S . . . SPACA3 124912 broad.mit.edu 36 17 28348874 28348874 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173847 exon5 c.G613T p.D205Y . . . ACCN1 40 broad.mit.edu 36 17 28368756 28368756 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183377 exon8 c.C1501T p.L501F . . . OR1G1 8390 broad.mit.edu 36 17 2976852 2976852 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003555 exon1 c.C744A p.V248V . . . TMEM132E 124842 broad.mit.edu 36 17 29983956 29983956 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207313 exon7 c.C1333T p.P445S . . . RAD51L3 5892 broad.mit.edu 36 17 30469668 30469668 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002878 exon3 c.G228T p.K76N . . . FNDC8 54752 broad.mit.edu 36 17 30473008 30473008 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017559 exon1 c.C183A p.F61L . . . OR1A2 26189 broad.mit.edu 36 17 3048462 3048462 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012352 exon1 c.G900T p.Q300H . . . UNC45B 146862 broad.mit.edu 36 17 30501185 30501185 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033576 exon4 c.G211A p.D71N . . . UNC45B 146862 broad.mit.edu 36 17 30504104 30504104 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033576 exon5 c.A461C p.K154T . . . UNC45B 146862 broad.mit.edu 36 17 30519375 30519375 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033576 exon10 c.T1334A p.L445H . . . UNC45B 146862 broad.mit.edu 36 17 30525420 30525420 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033576 exon14 c.C1877T p.A626V . . . SLFN5 162394 broad.mit.edu 36 17 30616376 30616376 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144975 exon5 c.G2032T p.V678F . . . AP2B1 163 broad.mit.edu 36 17 30977905 30977905 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001282 exon7 c.C869A p.T290N . . . GAS2L2 246176 broad.mit.edu 36 17 31097282 31097282 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139285 exon6 c.G1347T p.G449G . . . C17orf66 256957 broad.mit.edu 36 17 31206826 31206826 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152781 exon14 c.C1320A p.L440L . . . MYO19 80179 broad.mit.edu 36 17 31955206 31955206 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033580 exon7 c.C380T p.S127F . . . AATF 26574 broad.mit.edu 36 17 32452425 32452425 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012138 exon10 c.C1546T p.R516W . . . ACACA 31 broad.mit.edu 36 17 32623179 32623179 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198839 exon41 c.C4270T p.R1424C . . . ACACA 31 broad.mit.edu 36 17 32666104 32666104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198839 exon29 c.G3034A p.A1012T . . . ACACA 31 broad.mit.edu 36 17 32694764 32694764 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198839 exon15 c.G1155T p.Q385H . . . OR3A3 8392 broad.mit.edu 36 17 3271474 3271474 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012373 exon1 c.C863A p.T288N . . . OR1E2 8388 broad.mit.edu 36 17 3283859 3283859 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003554 exon1 c.C27A p.I9I . . . SYNRG 11276 broad.mit.edu 36 17 32976455 32976455 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007247 exon15 c.G2934A p.K978K . . . SPATA22 84690 broad.mit.edu 36 17 3299074 3299074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170696 exon5 c.C320T p.S107L . . . SYNRG 11276 broad.mit.edu 36 17 32995468 32995468 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007247 exon13 c.T1605A p.P535P . . . ASPA 443 broad.mit.edu 36 17 3331721 3331721 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128085 exon3 c.A311G p.D104G . . . C17orf98 388381 broad.mit.edu 36 17 34246952 34246952 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080465 exon2 c.G275T p.R92I . . . FBXO47 494188 broad.mit.edu 36 17 34354784 34354784 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008777 exon7 c.G748A p.A250T . . . STAC2 342667 broad.mit.edu 36 17 34624901 34624901 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198993 exon5 c.G695A p.S232N . . . CDK12 51755 broad.mit.edu 36 17 34881115 34881115 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016507 exon2 c.G1504T p.D502Y . . . GRB7 2886 broad.mit.edu 36 17 35153211 35153211 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005310 exon6 c.G625A p.D209N . . . IKZF3 22806 broad.mit.edu 36 17 35241915 35241915 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183230 exon2 c.C23T p.A8V . . . ZPBP2 124626 broad.mit.edu 36 17 35286477 35286477 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199321 exon8 c.G906A p.A302A . . . PSMD3 5709 broad.mit.edu 36 17 35399521 35399521 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002809 exon5 c.C690A p.F230L . . . THRA 7067 broad.mit.edu 36 17 35498151 35498151 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199334 exon8 c.A854G p.E285G . . . MSL1 339287 broad.mit.edu 36 17 35543342 35543342 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012241 exon8 c.G797T p.R266I . . . KRT222 125113 broad.mit.edu 36 17 36066325 36066325 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152349 exon6 c.C743A p.S248Y . . . KRT28 162605 broad.mit.edu 36 17 36206781 36206781 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181535 exon5 c.C891T p.G297G . . . KRTAP4-3 85290 broad.mit.edu 36 17 36577407 36577407 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033187 exon1 c.A544G p.T182A . . . KRT33A 3883 broad.mit.edu 36 17 36760391 36760391 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004138 exon1 c.T155C p.F52S . . . KRT33B 3884 broad.mit.edu 36 17 36774776 36774776 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002279 exon6 c.G878A p.R293Q . . . KRT33B 3884 broad.mit.edu 36 17 36779404 36779404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002279 exon1 c.G125A p.S42N . . . KRT31 3881 broad.mit.edu 36 17 36807255 36807255 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002277 exon1 c.C63T p.C21C . . . KRT32 3882 broad.mit.edu 36 17 36877008 36877008 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002278 exon1 c.G96A p.R32R . . . KRT19 3880 broad.mit.edu 36 17 36933602 36933602 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002276 exon6 c.G1122T p.E374D . . . KRT9 3857 broad.mit.edu 36 17 36977325 36977325 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000226 exon7 c.G1598T p.G533V . . . DNAJC7 7266 broad.mit.edu 36 17 37401911 37401911 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144766 exon4 c.C181T p.R61C . . . NKIRAS2 28511 broad.mit.edu 36 17 37428066 37428066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017595 exon3 c.G218A p.R73Q . . . KCNH4 23415 broad.mit.edu 36 17 37577509 37577509 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012285 exon7 c.C1018T p.R340W . . . STAT5B 6777 broad.mit.edu 36 17 37613266 37613266 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012448 exon16 c.G1913T p.R638I . . . STAT3 6774 broad.mit.edu 36 17 37739464 37739464 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213662 exon9 c.C927T p.I309I . . . STAT3 6774 broad.mit.edu 36 17 37753987 37753987 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213662 exon2 c.G74A p.S25N . . . MLX 6945 broad.mit.edu 36 17 37975687 37975687 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198204 exon7 c.C638T p.A213V . . . CNTNAP1 8506 broad.mit.edu 36 17 38093332 38093332 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003632 exon8 c.C1113T p.F371F . . . CNTNAP1 8506 broad.mit.edu 36 17 38098112 38098112 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003632 exon17 c.A2600G p.D867G . . . EZH1 2145 broad.mit.edu 36 17 38110658 38110658 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001991 exon17 c.G1909A p.E637K . . . G6PC 2538 broad.mit.edu 36 17 38313158 38313158 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000151 exon3 c.A433G p.T145A . . . AARSD1 80755 broad.mit.edu 36 17 38384786 38384786 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142654 exon3 c.G230A p.R77H . . . RUNDC1 146923 broad.mit.edu 36 17 38396898 38396898 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173079 exon5 c.G1481A p.R494Q . . . BRCA1 672 broad.mit.edu 36 17 38498613 38498613 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007294 exon10 c.G2461T p.D821Y . . . ZZEF1 23140 broad.mit.edu 36 17 3882278 3882278 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015113 exon42 c.C6783T p.C2261C . . . DHX8 1659 broad.mit.edu 36 17 38925904 38925904 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004941 exon6 c.T833C p.F278S . . . ETV4 2118 broad.mit.edu 36 17 38965708 38965708 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001986 exon8 c.G671T p.S224I . . . MPP3 4356 broad.mit.edu 36 17 39241960 39241960 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001932 exon19 c.C1471T p.L491L . . . LSM12 124801 broad.mit.edu 36 17 39470418 39470418 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152344 exon5 c.A383C p.K128T . . . C17orf53 78995 broad.mit.edu 36 17 39581576 39581576 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171251 exon3 c.A879C p.Q293H . . . UBTF 7343 broad.mit.edu 36 17 39644216 39644216 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001076683 exon10 c.G946T p.D316Y . . . UBTF 7343 broad.mit.edu 36 17 39644544 39644544 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001076683 exon9 c.C892A p.L298M . . . ITGA2B 3674 broad.mit.edu 36 17 39813532 39813532 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000419 exon14 c.C1401T p.I467I . . . ITGA2B 3674 broad.mit.edu 36 17 39817858 39817858 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000419 exon7 c.C783A p.Y261X . . . FZD2 2535 broad.mit.edu 36 17 39990855 39990855 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001466 exon1 c.C273T p.F91F . . . FZD2 2535 broad.mit.edu 36 17 39991881 39991881 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001466 exon1 c.C1299T p.A433A . . . C17orf104 284071 broad.mit.edu 36 17 40100275 40100275 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145080 exon5 c.T1470G p.P490P . . . DBF4B 80174 broad.mit.edu 36 17 40162853 40162853 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025104 exon4 c.G280T p.E94X . . . DBF4B 80174 broad.mit.edu 36 17 40174277 40174277 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025104 exon10 c.C761A p.S254Y . . . ADAM11 4185 broad.mit.edu 36 17 40209066 40209066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002390 exon18 c.G1531A p.D511N . . . GJC1 10052 broad.mit.edu 36 17 40237805 40237805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005497 exon3 c.G907A p.E303K . . . ANKFY1 51479 broad.mit.edu 36 17 4023993 4023993 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016376 exon20 c.T2886G p.N962K . . . KIF18B 146909 broad.mit.edu 36 17 40368964 40368964 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080443 exon2 c.G275A p.S92N . . . C17orf46 124783 broad.mit.edu 36 17 40688459 40688459 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152343 exon4 c.T873G p.N291K . . . MAP3K14 9020 broad.mit.edu 36 17 40719760 40719760 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003954 exon5 c.C972T p.L324L . . . IMP5 162540 broad.mit.edu 36 17 41278904 41278904 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175882 exon1 c.C852A p.I284I . . . UBE2G1 7326 broad.mit.edu 36 17 4132938 4132938 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003342 exon5 c.G454T p.E152X . . . MAPT 4137 broad.mit.edu 36 17 41416996 41416996 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001123066 exon6 c.C989T p.A330V . . . LRRC37A2 474170 broad.mit.edu 36 17 41981501 41981501 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006607 exon9 c.C3680T p.A1227V . . . WNT3 7473 broad.mit.edu 36 17 42201131 42201131 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030753 exon4 c.G792A p.S264S . . . CDC27 996 broad.mit.edu 36 17 42554857 42554857 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114091 exon18 c.C2362T p.R788C . . . CDC27 996 broad.mit.edu 36 17 42556280 42556280 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114091 exon17 c.G2224T p.E742X . . . ITGB3 3690 broad.mit.edu 36 17 42716913 42716913 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000212 exon4 c.G467T p.S156I . . . ITGB3 3690 broad.mit.edu 36 17 42722133 42722133 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000212 exon7 c.C1027A p.L343I . . . ITGB3 3690 broad.mit.edu 36 17 42739961 42739961 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000212 exon14 c.G2260A p.A754T . . . ITGB3 3690 broad.mit.edu 36 17 42742511 42742511 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000212 exon15 c.A2309G p.N770S . . . C17orf57 124989 broad.mit.edu 36 17 42776656 42776656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195192 exon7 c.C433T p.R145W . . . C17orf57 124989 broad.mit.edu 36 17 42777398 42777398 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195192 exon8 c.C452A p.S151Y . . . OSBPL7 114881 broad.mit.edu 36 17 43241770 43241770 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145798 exon19 c.G1954A p.E652K . . . CDK5RAP3 80279 broad.mit.edu 36 17 43407564 43407564 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176096 exon6 c.G375T p.E125D . . . SPNS2 124976 broad.mit.edu 36 17 4380779 4380779 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001124758 exon4 c.C677T p.T226M . . . TTLL6 284076 broad.mit.edu 36 17 44202377 44202377 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130918 exon14 c.A2122G p.T708A . . . DLX4 1748 broad.mit.edu 36 17 45406122 45406122 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001934 exon2 c.C323A p.S108Y . . . DLX4 1748 broad.mit.edu 36 17 45406290 45406290 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001934 exon2 c.C491T p.S164L . . . DLX3 1747 broad.mit.edu 36 17 45424205 45424205 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005220 exon3 c.G539A p.R180H . . . SAMD14 201191 broad.mit.edu 36 17 45546563 45546563 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174920 exon9 c.A1013C p.Q338P . . . MRPL27 51264 broad.mit.edu 36 17 45800515 45800515 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016504 exon4 c.G384T p.K128N . . . LRRC59 55379 broad.mit.edu 36 17 45820471 45820471 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018509 exon5 c.G451A p.V151M . . . CHAD 1101 broad.mit.edu 36 17 45898228 45898228 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001267 exon2 c.C777A p.F259L . . . MYCBPAP 84073 broad.mit.edu 36 17 45955989 45955989 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032133 exon12 c.A1609G p.T537A . . . WFIKKN2 124857 broad.mit.edu 36 17 46272023 46272023 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175575 exon2 c.C375A p.I125I . . . GLTPD2 388323 broad.mit.edu 36 17 4639574 4639574 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014985 exon3 c.C200T p.A67V . . . MBTD1 54799 broad.mit.edu 36 17 46639279 46639279 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017643 exon7 c.C573T p.V191V . . . PLD2 5338 broad.mit.edu 36 17 4668818 4668818 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002663 exon20 c.C2073A p.I691I . . . ENO3 2027 broad.mit.edu 36 17 4797350 4797350 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053013 exon5 c.T278G p.F93C . . . CAMTA2 23125 broad.mit.edu 36 17 4824196 4824196 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171167 exon9 c.A1214G p.N405S . . . KIF2B 84643 broad.mit.edu 36 17 49255743 49255743 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032559 exon1 c.C350T p.A117V . . . KIF2B 84643 broad.mit.edu 36 17 49255913 49255913 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032559 exon1 c.C520T p.R174C . . . KIF2B 84643 broad.mit.edu 36 17 49256920 49256920 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032559 exon1 c.C1527T p.G509G . . . ZFP3 124961 broad.mit.edu 36 17 4935784 4935784 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153018 exon2 c.G261T p.E87D . . . ZFP3 124961 broad.mit.edu 36 17 4936135 4936135 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153018 exon2 c.G612T p.K204N . . . ZFP3 124961 broad.mit.edu 36 17 4936862 4936862 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153018 exon2 c.A1339G p.K447E . . . HLF 3131 broad.mit.edu 36 17 50700226 50700226 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002126 exon2 c.C231T p.D77D . . . ANKFN1 162282 broad.mit.edu 36 17 51786318 51786318 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153228 exon5 c.C522A p.G174G . . . DERL2 51009 broad.mit.edu 36 17 5324525 5324525 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016041 exon5 c.C429A p.F143L . . . RNF43 54894 broad.mit.edu 36 17 53794944 53794944 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017763 exon6 c.C647T p.S216L . . . HSF5 124535 broad.mit.edu 36 17 53895362 53895362 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080439 exon4 c.C1322A p.S441Y . . . C17orf47 284083 broad.mit.edu 36 17 53976429 53976429 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001038704 exon1 c.C118T p.R40X . . . NLRP1 22861 broad.mit.edu 36 17 5426789 5426789 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033004 exon2 c.C373T p.P125S . . . PPM1E 22843 broad.mit.edu 36 17 54397884 54397884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014906 exon3 c.G631A p.E211K . . . TRIM37 4591 broad.mit.edu 36 17 54511897 54511897 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015294 exon7 c.G616T p.G206C . . . C17orf71 55181 broad.mit.edu 36 17 54643776 54643776 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018149 exon1 c.C1582T p.L528F . . . YPEL2 388403 broad.mit.edu 36 17 54829260 54829260 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005404 exon5 c.G287A p.S96N . . . CLTC 1213 broad.mit.edu 36 17 55113071 55113071 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004859 exon19 c.T2936C p.L979S . . . PTRH2 51651 broad.mit.edu 36 17 55130008 55130008 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016077 exon2 c.G114T p.G38G . . . RPS6KB1 6198 broad.mit.edu 36 17 55372990 55372990 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003161 exon13 c.G1131A p.E377E . . . CA4 762 broad.mit.edu 36 17 55589659 55589659 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000717 exon4 c.G358A p.D120N . . . USP32 84669 broad.mit.edu 36 17 55612765 55612765 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032582 exon33 c.C4564A p.L1522M . . . USP32 84669 broad.mit.edu 36 17 55726940 55726940 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032582 exon4 c.T297G p.I99M . . . TBX4 9496 broad.mit.edu 36 17 56910883 56910883 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018488 exon5 c.G663T p.E221D . . . MED13 9969 broad.mit.edu 36 17 57383126 57383126 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005121 exon28 c.C6133T p.R2045W . . . MED13 9969 broad.mit.edu 36 17 57393869 57393869 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005121 exon22 c.C5118A p.I1706I . . . MED13 9969 broad.mit.edu 36 17 57443084 57443084 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005121 exon9 c.G1576A p.E526K . . . MED13 9969 broad.mit.edu 36 17 57461705 57461705 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005121 exon8 c.G1262T p.R421I . . . MARCH10 162333 broad.mit.edu 36 17 58167537 58167537 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100875 exon6 c.C1424A p.S475X . . . TANC2 26115 broad.mit.edu 36 17 58836331 58836331 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025185 exon18 c.C3226T p.R1076C . . . TANC2 26115 broad.mit.edu 36 17 58851098 58851098 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025185 exon25 c.C4023T p.F1341F . . . KCNH6 81033 broad.mit.edu 36 17 58973420 58973420 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030779 exon9 c.G2041A p.D681N . . . MAP3K3 4215 broad.mit.edu 36 17 59122253 59122253 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203351 exon14 c.C1365T p.I455I . . . PSMC5 5705 broad.mit.edu 36 17 59262703 59262703 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002805 exon10 c.G1075T p.V359L . . . SCN4A 6329 broad.mit.edu 36 17 59372817 59372817 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000334 exon24 c.C4557T p.F1519F . . . ERN1 2081 broad.mit.edu 36 17 59479070 59479070 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001433 exon19 c.C2409A p.V803V . . . PECAM1 5175 broad.mit.edu 36 17 59760811 59760811 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000442 exon14 c.C1895T p.A632V . . . RGS9 8787 broad.mit.edu 36 17 60634558 60634558 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003835 exon16 c.T1260A p.A420A . . . AXIN2 8313 broad.mit.edu 36 17 60968078 60968078 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004655 exon4 c.G1016A p.R339H . . . CCDC46 201134 broad.mit.edu 36 17 61278435 61278435 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199165 exon21 c.A2343C p.K781N . . . CCDC46 201134 broad.mit.edu 36 17 61388077 61388077 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199165 exon18 c.A1838G p.N613S . . . CCDC46 201134 broad.mit.edu 36 17 61496519 61496519 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199165 exon9 c.G831T p.Q277H . . . PRKCA 5578 broad.mit.edu 36 17 62169259 62169259 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002737 exon13 c.C1443A p.D481E . . . HELZ 9931 broad.mit.edu 36 17 62536180 62536180 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014877 exon29 c.G4003T p.D1335Y . . . AIPL1 23746 broad.mit.edu 36 17 6269686 6269686 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033054 exon5 c.A784G p.N262D . . . PITPNC1 26207 broad.mit.edu 36 17 63004813 63004813 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181671 exon5 c.A344G p.D115G . . . PITPNM3 83394 broad.mit.edu 36 17 6322099 6322099 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165966 exon7 c.G712A p.D238N . . . FAM20A 54757 broad.mit.edu 36 17 64051424 64051424 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017565 exon5 c.C753A p.F251L . . . ABCA8 10351 broad.mit.edu 36 17 64376077 64376077 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007168 exon37 c.A4607C p.D1536A . . . KIAA0753 9851 broad.mit.edu 36 17 6439059 6439059 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014804 exon16 c.C2397T p.I799I . . . ABCA8 10351 broad.mit.edu 36 17 64415517 64415517 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007168 exon16 c.T2117G p.L706R . . . ABCA9 10350 broad.mit.edu 36 17 64497549 64497549 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080283 exon30 c.G3955T p.G1319C . . . KIAA0753 9851 broad.mit.edu 36 17 6452506 6452506 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014804 exon10 c.C1715A p.A572D . . . ABCA9 10350 broad.mit.edu 36 17 64535382 64535382 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080283 exon13 c.G1785T p.E595D . . . ABCA9 10350 broad.mit.edu 36 17 64539874 64539874 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080283 exon10 c.C1415A p.S472Y . . . ABCA10 10349 broad.mit.edu 36 17 64664575 64664575 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080282 exon29 c.G3448A p.V1150I . . . ABCA10 10349 broad.mit.edu 36 17 64709322 64709322 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080282 exon11 c.C1089A p.I363I . . . ABCA10 10349 broad.mit.edu 36 17 64709401 64709401 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080282 exon11 c.A1010C p.K337T . . . ABCA5 23461 broad.mit.edu 36 17 64762081 64762081 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon32 c.G4214T p.S1405I . . . ABCA5 23461 broad.mit.edu 36 17 64762152 64762152 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon32 c.G4143T p.Q1381H . . . ABCA5 23461 broad.mit.edu 36 17 64797714 64797714 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172232 exon13 c.A1666C p.K556Q . . . ABCA5 23461 broad.mit.edu 36 17 64802393 64802393 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172232 exon11 c.G1493T p.R498I . . . MAP2K6 5608 broad.mit.edu 36 17 65027081 65027081 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002758 exon5 c.G279T p.Q93H . . . KCNJ16 3773 broad.mit.edu 36 17 65640643 65640643 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170742 exon4 c.G820T p.D274Y . . . TEKT1 83659 broad.mit.edu 36 17 6644168 6644168 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053285 exon8 c.G1159A p.E387K . . . COG1 9382 broad.mit.edu 36 17 68709595 68709595 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018714 exon7 c.C2034T p.S678S . . . COG1 9382 broad.mit.edu 36 17 68711461 68711461 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018714 exon9 c.G2316A p.M772I . . . C17orf80 55028 broad.mit.edu 36 17 68750703 68750703 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100622 exon5 c.C1695T p.F565F . . . SDK2 54549 broad.mit.edu 36 17 68909843 68909843 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144952 exon19 c.G2517T p.E839D . . . TTYH2 94015 broad.mit.edu 36 17 69760870 69760870 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032646 exon12 c.C1315T p.R439C . . . CD300LD 100131439 broad.mit.edu 36 17 70087740 70087740 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115152 exon4 c.C581A p.S194Y . . . FDXR 2232 broad.mit.edu 36 17 70372634 70372634 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024417 exon7 c.G624A p.T208T . . . OTOP3 347741 broad.mit.edu 36 17 70450985 70450985 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178233 exon4 c.C637T p.L213F . . . ACADVL 37 broad.mit.edu 36 17 7067764 7067764 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000018 exon12 c.C1260A p.I420I . . . CTDNEP1 23399 broad.mit.edu 36 17 7090398 7090398 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015343 exon6 c.G376A p.E126K . . . RECQL5 9400 broad.mit.edu 36 17 71172767 71172767 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003716 exon3 c.G211T p.G71C . . . SLC2A4 6517 broad.mit.edu 36 17 7128537 7128537 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042 exon7 c.G737A p.R246H . . . YBX2 51087 broad.mit.edu 36 17 7135188 7135188 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015982 exon4 c.G407A p.R136H . . . SRP68 6730 broad.mit.edu 36 17 71547496 71547496 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014230 exon16 c.C1770A p.F590L . . . GPS2 2874 broad.mit.edu 36 17 7157158 7157158 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004489 exon10 c.C814T p.R272C . . . NEURL4 84461 broad.mit.edu 36 17 7162134 7162134 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032442 exon25 c.G4034A p.R1345H . . . NEURL4 84461 broad.mit.edu 36 17 7168950 7168950 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032442 exon9 c.C1705T p.R569C . . . ST6GALNAC1 55808 broad.mit.edu 36 17 72136713 72136713 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018414 exon2 c.C807A p.S269R . . . MXRA7 439921 broad.mit.edu 36 17 72185301 72185301 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008528 exon4 c.C579T p.G193G . . . JMJD6 23210 broad.mit.edu 36 17 72233423 72233423 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015167 exon2 c.C239A p.S80Y . . . CHRNB1 1140 broad.mit.edu 36 17 7290127 7290127 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000747 exon3 c.G214T p.E72X . . . SEPT9 10801 broad.mit.edu 36 17 72909745 72909745 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113493 exon2 c.G65T p.R22I . . . AMAC1L3 643664 broad.mit.edu 36 17 7326144 7326144 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102614 exon2 c.C117T p.G39G . . . POLR2A 5430 broad.mit.edu 36 17 7357196 7357196 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000937 exon29 c.C4889A p.S1630Y . . . Unknown 0 broad.mit.edu 36 17 73934777 73934777 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173628 exon78 c.C12596T p.A4199V . . . Unknown 0 broad.mit.edu 36 17 74065878 74065878 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173628 exon14 c.G2085T p.E695D . . . USP36 57602 broad.mit.edu 36 17 74306158 74306158 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025090 exon20 c.G3311A p.R1104Q . . . C1QTNF1 114897 broad.mit.edu 36 17 74555558 74555558 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198594 exon3 c.G393T p.K131N . . . SAT2 112483 broad.mit.edu 36 17 7471030 7471030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133491 exon4 c.G260A p.R87H . . . SHBG 6462 broad.mit.edu 36 17 7474290 7474290 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040 exon1 c.C75T p.R25R . . . TP53 7157 broad.mit.edu 36 17 7519132 7519132 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126114 exon5 c.C523T p.R175C TP53,lung,NS,Substitution - Missense,+1 . . CBX8 57332 broad.mit.edu 36 17 75383033 75383033 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020649 exon5 c.G1166T p.R389I . . . RNF213 57674 broad.mit.edu 36 17 75931556 75931556 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020914 exon28 c.G6166A p.D2056N . . . RNF213 57674 broad.mit.edu 36 17 75933820 75933820 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020914 exon30 c.G7237A p.D2413N . . . DNAH2 146754 broad.mit.edu 36 17 7608175 7608175 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon19 c.G3195A p.P1065P . . . DNAH2 146754 broad.mit.edu 36 17 7622401 7622401 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon34 c.C5430T p.T1810T . . . DNAH2 146754 broad.mit.edu 36 17 7640626 7640626 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon49 c.C7794T p.T2598T . . . DNAH2 146754 broad.mit.edu 36 17 7645675 7645675 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon56 c.C8754A p.F2918L . . . DNAH2 146754 broad.mit.edu 36 17 7645750 7645750 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon56 c.G8829T p.E2943D . . . DNAH2 146754 broad.mit.edu 36 17 7663093 7663093 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon70 c.A10802G p.D3601G . . . DNAH2 146754 broad.mit.edu 36 17 7675465 7675465 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020877 exon80 c.G12492T p.K4164N . . . SLC38A10 124565 broad.mit.edu 36 17 76840730 76840730 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037984 exon13 c.G1805A p.G602D . . . NPLOC4 55666 broad.mit.edu 36 17 77174729 77174729 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017921 exon10 c.G973A p.V325I . . . CHD3 1107 broad.mit.edu 36 17 7735068 7735068 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005852 exon4 c.A470C p.H157P . . . P4HB 5034 broad.mit.edu 36 17 77406709 77406709 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000918 exon3 c.G395A p.R132H . . . NARF 26502 broad.mit.edu 36 17 78023751 78023751 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031968 exon5 c.G408A p.T136T . . . ALOXE3 59344 broad.mit.edu 36 17 7952572 7952572 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021628 exon13 c.G1623A p.S541S . . . AURKB 9212 broad.mit.edu 36 17 8051249 8051249 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004217 exon5 c.G368A p.R123H . . . ARHGEF15 22899 broad.mit.edu 36 17 8163369 8163369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025014 exon14 c.G2201A p.R734H . . . ODF4 146852 broad.mit.edu 36 17 8189737 8189737 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153007 exon3 c.A616C p.S206R . . . KRBA2 124751 broad.mit.edu 36 17 8213380 8213380 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213597 exon2 c.C1276A p.P426T . . . NDEL1 81565 broad.mit.edu 36 17 8292649 8292649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025579 exon5 c.G446A p.R149Q . . . NTN1 9423 broad.mit.edu 36 17 9065274 9065274 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004822 exon6 c.G1476T p.K492N . . . DHRS7C 201140 broad.mit.edu 36 17 9624026 9624026 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105571 exon3 c.C319A p.P107T . . . MYH13 8735 broad.mit.edu 36 17 10189500 10189500 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYH2 4620 broad.mit.edu 36 17 10377685 10377685 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DNAH9 1770 broad.mit.edu 36 17 11463831 11463831 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARHGAP44 9912 broad.mit.edu 36 17 12759941 12759941 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SERPINF1 5176 broad.mit.edu 36 17 1625090 1625090 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CCDC144A 9720 broad.mit.edu 36 17 16551590 16551590 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SMCR8 140775 broad.mit.edu 36 17 18167113 18167113 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC5A10 125206 broad.mit.edu 36 17 18864184 18864184 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SGSM2 9905 broad.mit.edu 36 17 2217453 2217453 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EFCAB5 374786 broad.mit.edu 36 17 25444089 25444089 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CRLF3 51379 broad.mit.edu 36 17 26148448 26148448 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ACCN1 40 broad.mit.edu 36 17 28463209 28463209 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AP2B1 163 broad.mit.edu 36 17 31008934 31008934 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GGNBP2 79893 broad.mit.edu 36 17 31997730 31997730 + Splice_Site SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRPV3 162514 broad.mit.edu 36 17 3371089 3371089 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRPV3 162514 broad.mit.edu 36 17 3374232 3374232 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NR1D1 9572 broad.mit.edu 36 17 35506210 35506210 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KRT14 3861 broad.mit.edu 36 17 36994030 36994030 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MBTD1 54799 broad.mit.edu 36 17 46634062 46634062 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CHRNE 1145 broad.mit.edu 36 17 4746162 4746162 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . STXBP4 252983 broad.mit.edu 36 17 50510430 50510430 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TEX14 56155 broad.mit.edu 36 17 54093386 54093386 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DHX40 79665 broad.mit.edu 36 17 55034655 55034655 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . BCAS3 54828 broad.mit.edu 36 17 56356540 56356540 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TBX4 9496 broad.mit.edu 36 17 56912469 56912469 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BRIP1 83990 broad.mit.edu 36 17 57117969 57117969 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MARCH10 162333 broad.mit.edu 36 17 58219698 58219698 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TEX2 55852 broad.mit.edu 36 17 59591891 59591891 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 17 59739635 59739635 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LRRC37A3 374819 broad.mit.edu 36 17 60281235 60281235 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AMZ2 51321 broad.mit.edu 36 17 63758715 63758715 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ABCA8 10351 broad.mit.edu 36 17 64440012 64440012 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ABCA10 10349 broad.mit.edu 36 17 64683137 64683137 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C17orf86 654434 broad.mit.edu 36 17 72597001 72597001 + RNA SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . BIRC5 332 broad.mit.edu 36 17 73731335 73731335 + 3'UTR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RNF213 57674 broad.mit.edu 36 17 75950295 75950295 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AFG3L2 10939 broad.mit.edu 36 18 12348777 12348777 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006796 exon8 c.G918A p.K306K . . . SPIRE1 56907 broad.mit.edu 36 18 12439710 12439710 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128627 exon16 c.C1796T p.T599M . . . CEP76 79959 broad.mit.edu 36 18 12691088 12691088 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024899 exon2 c.G88T p.E30X . . . SEH1L 81929 broad.mit.edu 36 18 12976900 12976900 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013437 exon9 c.G1110A p.S370S . . . CEP192 55125 broad.mit.edu 36 18 13104134 13104134 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032142 exon42 c.C7173T p.I2391I . . . C18orf19 125228 broad.mit.edu 36 18 13671792 13671792 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152352 exon2 c.T285G p.V95V . . . MC5R 4161 broad.mit.edu 36 18 13816667 13816667 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005913 exon1 c.G903T p.E301D . . . MC2R 4158 broad.mit.edu 36 18 13875284 13875284 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000529 exon2 c.C234A p.I78I . . . ZNF519 162655 broad.mit.edu 36 18 14095755 14095755 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145287 exon3 c.G784T p.E262X . . . ROCK1 6093 broad.mit.edu 36 18 16793845 16793845 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005406 exon29 c.G3466A p.E1156K . . . ROCK1 6093 broad.mit.edu 36 18 16801023 16801023 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005406 exon27 c.G3205A p.E1069K . . . ROCK1 6093 broad.mit.edu 36 18 16825176 16825176 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005406 exon18 c.A2102C p.K701T . . . NPC1 4864 broad.mit.edu 36 18 19366223 19366223 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000271 exon25 c.A3778C p.S1260R . . . LAMA3 3909 broad.mit.edu 36 18 19783847 19783847 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127718 exon33 c.G4477T p.G1493C . . . TTC39C 125488 broad.mit.edu 36 18 19914870 19914870 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135993 exon5 c.G784A p.E262K . . . CABYR 26256 broad.mit.edu 36 18 19990214 19990214 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153768 exon3 c.G697T p.E233X . . . OSBPL1A 114876 broad.mit.edu 36 18 20166958 20166958 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080597 exon7 c.T571G p.C191G . . . OSBPL1A 114876 broad.mit.edu 36 18 20202293 20202293 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080597 exon3 c.G163T p.A55S . . . ZNF521 25925 broad.mit.edu 36 18 21059937 21059937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015461 exon4 c.G1943A p.S648N . . . ZNF521 25925 broad.mit.edu 36 18 21060177 21060177 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015461 exon4 c.C1703T p.S568L . . . TAF4B 6875 broad.mit.edu 36 18 22061083 22061083 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005640 exon1 c.G188A p.R63Q . . . CDH2 1000 broad.mit.edu 36 18 23819516 23819516 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001792 exon12 c.G1949T p.R650I . . . CDH2 1000 broad.mit.edu 36 18 23822588 23822588 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001792 exon11 c.G1639T p.D547Y . . . CDH2 1000 broad.mit.edu 36 18 23836972 23836972 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001792 exon7 c.G1007T p.G336V . . . NDC80 10403 broad.mit.edu 36 18 2568011 2568011 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006101 exon5 c.C347A p.S116Y . . . SMCHD1 23347 broad.mit.edu 36 18 2678712 2678712 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015295 exon7 c.G840T p.E280D . . . DSG1 1828 broad.mit.edu 36 18 27173973 27173973 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001942 exon11 c.C1674A p.F558L . . . DSG1 1828 broad.mit.edu 36 18 27188326 27188326 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001942 exon15 c.C2169T p.I723I . . . DSG3 1830 broad.mit.edu 36 18 27298207 27298207 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001944 exon9 c.G1135T p.E379X . . . DSG3 1830 broad.mit.edu 36 18 27299372 27299372 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001944 exon10 c.T1365G p.T455T . . . SMCHD1 23347 broad.mit.edu 36 18 2733877 2733877 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015295 exon29 c.C3752A p.S1251Y . . . DSG2 1829 broad.mit.edu 36 18 27370264 27370264 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001943 exon11 c.G1525A p.D509N . . . B4GALT6 9331 broad.mit.edu 36 18 27461020 27461020 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004775 exon7 c.T839G p.I280S . . . RNF138 51444 broad.mit.edu 36 18 27947798 27947798 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016271 exon4 c.C369A p.I123I . . . EMILIN2 84034 broad.mit.edu 36 18 2880629 2880629 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032048 exon4 c.G504T p.W168C . . . C18orf34 374864 broad.mit.edu 36 18 29058884 29058884 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198995 exon17 c.C1671A p.S557S . . . C18orf34 374864 broad.mit.edu 36 18 29079350 29079350 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198995 exon15 c.T1450G p.L484V . . . LPIN2 9663 broad.mit.edu 36 18 2911621 2911621 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014646 exon18 c.G2352T p.E784D . . . ASXL3 80816 broad.mit.edu 36 18 29495691 29495691 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030632 exon5 c.C469A p.L157I . . . ASXL3 80816 broad.mit.edu 36 18 29568353 29568353 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030632 exon10 c.T1058C p.F353S . . . ASXL3 80816 broad.mit.edu 36 18 29573967 29573967 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030632 exon11 c.C2601T p.S867S . . . ASXL3 80816 broad.mit.edu 36 18 29577743 29577743 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030632 exon12 c.C3933A p.G1311G . . . ASXL3 80816 broad.mit.edu 36 18 29579054 29579054 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030632 exon12 c.G5244A p.P1748P . . . MYOM1 8736 broad.mit.edu 36 18 3057390 3057390 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003803 exon38 c.A4928G p.K1643R . . . MAPRE2 10982 broad.mit.edu 36 18 30904249 30904249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143827 exon3 c.C179A p.S60Y . . . MAPRE2 10982 broad.mit.edu 36 18 30931545 30931545 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143827 exon4 c.G352A p.V118I . . . ZSCAN30 100101467 broad.mit.edu 36 18 31088302 31088302 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166012 exon5 c.G595T p.E199X . . . ZNF24 7572 broad.mit.edu 36 18 31171253 31171253 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006965 exon4 c.C1048A p.L350I . . . ZNF396 252884 broad.mit.edu 36 18 31203322 31203322 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145756 exon4 c.T863C p.F288S . . . MYOM1 8736 broad.mit.edu 36 18 3154279 3154279 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003803 exon10 c.C1498T p.R500X . . . SLC39A6 25800 broad.mit.edu 36 18 31948125 31948125 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099406 exon6 c.C951T p.V317V . . . ELP2 55250 broad.mit.edu 36 18 31998581 31998581 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018255 exon18 c.G1907A p.R636Q . . . MOCOS 55034 broad.mit.edu 36 18 32029270 32029270 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017947 exon2 c.C195T p.L65L . . . FHOD3 80206 broad.mit.edu 36 18 32436715 32436715 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025135 exon8 c.A799C p.T267P . . . KIAA1328 57536 broad.mit.edu 36 18 32793374 32793374 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020776 exon6 c.C554T p.A185V . . . COLEC12 81035 broad.mit.edu 36 18 336877 336877 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130386 exon5 c.C745A p.L249I . . . COLEC12 81035 broad.mit.edu 36 18 338071 338071 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130386 exon4 c.A274C p.K92Q . . . SYT4 6860 broad.mit.edu 36 18 39104447 39104447 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020783 exon4 c.T1135G p.S379A . . . SYT4 6860 broad.mit.edu 36 18 39108125 39108125 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020783 exon2 c.G267T p.K89N . . . SYT4 6860 broad.mit.edu 36 18 39108302 39108302 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020783 exon2 c.C90A p.V30V . . . SETBP1 26040 broad.mit.edu 36 18 40784437 40784437 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015559 exon4 c.A1134C p.Q378H . . . SETBP1 26040 broad.mit.edu 36 18 40897263 40897263 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015559 exon6 c.G4393A p.D1465N . . . SLC14A2 8170 broad.mit.edu 36 18 41501875 41501875 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007163 exon14 c.C1797T p.S599S . . . KIAA1632 57724 broad.mit.edu 36 18 41762944 41762944 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon13 c.G2442T p.E814D . . . KIAA1632 57724 broad.mit.edu 36 18 41773588 41773588 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon10 c.T2075C p.V692A . . . KIAA1632 57724 broad.mit.edu 36 18 41785188 41785188 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020964 exon4 c.G1267T p.E423X . . . ATP5A1 498 broad.mit.edu 36 18 41925722 41925722 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004046 exon3 c.G233A p.G78D . . . RNF165 494470 broad.mit.edu 36 18 42290532 42290532 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152470 exon8 c.G976A p.A326T . . . TCEB3B 51224 broad.mit.edu 36 18 42813700 42813700 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016427 exon1 c.A1934C p.K645T . . . TCEB3B 51224 broad.mit.edu 36 18 42815206 42815206 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016427 exon1 c.A428G p.H143R . . . KATNAL2 83473 broad.mit.edu 36 18 42838697 42838697 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031303 exon4 c.G210A p.S70S . . . KATNAL2 83473 broad.mit.edu 36 18 42881363 42881363 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031303 exon15 c.G1390A p.E464K . . . DYM 54808 broad.mit.edu 36 18 45160061 45160061 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017653 exon4 c.G259T p.E87X . . . CCDC11 220136 broad.mit.edu 36 18 46007913 46007913 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145020 exon8 c.T1381A p.S461T . . . CCDC11 220136 broad.mit.edu 36 18 46031931 46031931 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145020 exon4 c.T695A p.L232Q . . . CCDC11 220136 broad.mit.edu 36 18 46032088 46032088 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145020 exon4 c.C538T p.R180W . . . MBD1 4152 broad.mit.edu 36 18 46054011 46054011 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015845 exon11 c.T1298G p.L433R . . . MBD1 4152 broad.mit.edu 36 18 46054162 46054162 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015845 exon11 c.C1147T p.R383X . . . CXXC1 30827 broad.mit.edu 36 18 46063280 46063280 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101654 exon14 c.G1778A p.R593H . . . ELAC1 55520 broad.mit.edu 36 18 46764824 46764824 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018696 exon3 c.T518G p.F173C . . . DCC 1630 broad.mit.edu 36 18 48686438 48686438 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005215 exon3 c.G439T p.E147X . . . DCC 1630 broad.mit.edu 36 18 48988114 48988114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005215 exon11 c.G1790A p.R597Q . . . DCC 1630 broad.mit.edu 36 18 49177741 49177741 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005215 exon18 c.C2754A p.F918L . . . POLI 11201 broad.mit.edu 36 18 50074200 50074200 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007195 exon10 c.G1588T p.E530X . . . POLI 11201 broad.mit.edu 36 18 50074303 50074303 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007195 exon10 c.C1691T p.A564V . . . POLI 11201 broad.mit.edu 36 18 50074530 50074530 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007195 exon10 c.G1918T p.E640X . . . RAB27B 5874 broad.mit.edu 36 18 50695932 50695932 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004163 exon2 c.A118C p.T40P . . . RAB27B 5874 broad.mit.edu 36 18 50702659 50702659 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004163 exon4 c.T337G p.W113G . . . WDR7 23335 broad.mit.edu 36 18 52490843 52490843 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015285 exon2 c.G99A p.T33T . . . WDR7 23335 broad.mit.edu 36 18 52501046 52501046 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015285 exon5 c.A484C p.S162R . . . WDR7 23335 broad.mit.edu 36 18 52536250 52536250 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015285 exon13 c.A1636C p.S546R . . . ATP8B1 5205 broad.mit.edu 36 18 53473644 53473644 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005603 exon23 c.C2711T p.A904V . . . EPB41L3 23136 broad.mit.edu 36 18 5400588 5400588 + Missense_Mutation SNP C T T rs61731698 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012307 exon14 c.G2098A p.D700N . . . EPB41L3 23136 broad.mit.edu 36 18 5406169 5406169 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012307 exon13 c.C1715A p.A572D . . . EPB41L3 23136 broad.mit.edu 36 18 5406244 5406244 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012307 exon13 c.C1640A p.A547D . . . NEDD4L 23327 broad.mit.edu 36 18 54148971 54148971 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015277 exon11 c.G835A p.E279K . . . ALPK2 115701 broad.mit.edu 36 18 54353357 54353357 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052947 exon5 c.C5042T p.A1681V . . . ALPK2 115701 broad.mit.edu 36 18 54398670 54398670 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052947 exon4 c.C318T p.C106C . . . MALT1 10892 broad.mit.edu 36 18 54499512 54499512 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173844 exon2 c.G340T p.E114X . . . MALT1 10892 broad.mit.edu 36 18 54527603 54527603 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173844 exon5 c.C663T p.G221G . . . SEC11C 90701 broad.mit.edu 36 18 54973970 54973970 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033280 exon4 c.G418T p.E140X . . . CPLX4 339302 broad.mit.edu 36 18 55115032 55115032 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181654 exon3 c.G361T p.D121Y . . . MC4R 4160 broad.mit.edu 36 18 56189744 56189744 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005912 exon1 c.G819T p.Q273H . . . MC4R 4160 broad.mit.edu 36 18 56190141 56190141 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005912 exon1 c.T422A p.L141H . . . CDH20 28316 broad.mit.edu 36 18 57372646 57372646 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031891 exon11 c.C2144T p.T715M . . . ZCCHC2 54877 broad.mit.edu 36 18 58393279 58393279 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017742 exon13 c.G2985A p.T995T . . . TMEM200C 645369 broad.mit.edu 36 18 5880223 5880223 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080209 exon1 c.G1840T p.E614X . . . SERPINB4 6318 broad.mit.edu 36 18 59461708 59461708 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002974 exon2 c.C84A p.F28L . . . SERPINB11 89778 broad.mit.edu 36 18 59538232 59538232 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080475 exon6 c.G481T p.V161F . . . SERPINB7 8710 broad.mit.edu 36 18 59622688 59622688 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003784 exon8 c.G982T p.E328X . . . SERPINB2 5055 broad.mit.edu 36 18 59716035 59716035 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002575 exon5 c.C512T p.S171F . . . SERPINB2 5055 broad.mit.edu 36 18 59721474 59721474 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002575 exon8 c.G1203A p.K401K . . . SERPINB10 5273 broad.mit.edu 36 18 59748379 59748379 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005024 exon5 c.A611G p.E204G . . . HMSD 284293 broad.mit.edu 36 18 59778488 59778488 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001123366 exon4 c.A339C p.K113N . . . SERPINB8 5271 broad.mit.edu 36 18 59805247 59805247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002640 exon7 c.G880A p.E294K . . . CLUL1 27098 broad.mit.edu 36 18 608037 608037 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199167 exon2 c.C37T p.L13L . . . CDH19 28513 broad.mit.edu 36 18 62362221 62362221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021153 exon7 c.C1181T p.A394V . . . DSEL 92126 broad.mit.edu 36 18 63330929 63330929 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032160 exon2 c.A1927G p.K643E . . . DSEL 92126 broad.mit.edu 36 18 63331831 63331831 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032160 exon2 c.C1025A p.S342Y . . . CCDC102B 79839 broad.mit.edu 36 18 64655494 64655494 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093729 exon4 c.G514T p.D172Y . . . DOK6 220164 broad.mit.edu 36 18 65516708 65516708 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152721 exon5 c.C498A p.L166L . . . RTTN 25914 broad.mit.edu 36 18 65822423 65822423 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173630 exon49 c.A6625C p.N2209H . . . NETO1 81832 broad.mit.edu 36 18 68601958 68601958 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138966 exon7 c.G803A p.R268H . . . ARHGAP28 79822 broad.mit.edu 36 18 6866132 6866132 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010000 exon9 c.T738G p.F246L . . . LAMA1 284217 broad.mit.edu 36 18 6939109 6939109 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon59 c.A8547C p.K2849N . . . LAMA1 284217 broad.mit.edu 36 18 6940820 6940820 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon58 c.C8358A p.V2786V . . . LAMA1 284217 broad.mit.edu 36 18 6961976 6961976 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon48 c.C6779A p.S2260Y . . . LAMA1 284217 broad.mit.edu 36 18 6968322 6968322 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon43 c.C6063T p.S2021S . . . LAMA1 284217 broad.mit.edu 36 18 6972583 6972583 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005559 exon41 c.G5803T p.E1935X . . . CYB5A 1528 broad.mit.edu 36 18 70110043 70110043 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148923 exon1 c.G48T p.E16D . . . CNDP1 84735 broad.mit.edu 36 18 70377564 70377564 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032649 exon3 c.G180T p.E60D . . . CNDP1 84735 broad.mit.edu 36 18 70396489 70396489 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032649 exon9 c.A1114C p.K372Q . . . ZADH2 284273 broad.mit.edu 36 18 71042484 71042484 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175907 exon2 c.C1009A p.L337M . . . TSHZ1 10194 broad.mit.edu 36 18 71127224 71127225 + Missense_Mutation DNP CG TA TA novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005786 exon2 c.739_740TA . . . NA LRRC30 339291 broad.mit.edu 36 18 7221664 7221664 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105581 exon1 c.G528A p.A176A . . . SALL3 27164 broad.mit.edu 36 18 74858070 74858070 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_171999 exon3 c.C3663T p.N1221N . . . NFATC1 4772 broad.mit.edu 36 18 75312020 75312020 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006162 exon5 c.G1668T p.K556N . . . TXNL4A 10907 broad.mit.edu 36 18 75834829 75834829 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006701 exon3 c.G273T p.M91I . . . ADNP2 22850 broad.mit.edu 36 18 75995205 75995205 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014913 exon4 c.A918T p.G306G . . . PTPRM 5797 broad.mit.edu 36 18 7878178 7878178 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon3 c.G271T p.E91X . . . PTPRM 5797 broad.mit.edu 36 18 8075801 8075801 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon10 c.A1684G p.T562A . . . PTPRM 5797 broad.mit.edu 36 18 8286396 8286396 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon18 c.G2746A p.D916N . . . PTPRM 5797 broad.mit.edu 36 18 8370349 8370349 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002845 exon27 c.T3803C p.V1268A . . . KIAA0802 23255 broad.mit.edu 36 18 8710369 8710369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015210 exon4 c.G232A p.E78K . . . KIAA0802 23255 broad.mit.edu 36 18 8774266 8774266 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015210 exon6 c.G1156A p.D386N . . . KIAA0802 23255 broad.mit.edu 36 18 8774467 8774467 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015210 exon6 c.T1357C p.Y453H . . . ADCYAP1 116 broad.mit.edu 36 18 895390 895390 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001117 exon1 c.G3T p.M1I . . . ANKRD12 23253 broad.mit.edu 36 18 9244528 9244528 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083625 exon8 c.C1194A p.V398V . . . ANKRD12 23253 broad.mit.edu 36 18 9247181 9247181 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083625 exon8 c.G3847T p.E1283X . . . TWSG1 57045 broad.mit.edu 36 18 9386361 9386361 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020648 exon4 c.C307A p.L103I . . . PPP4R1 9989 broad.mit.edu 36 18 9567098 9567098 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042388 exon10 c.A1010C p.K337T . . . PPP4R1 9989 broad.mit.edu 36 18 9578179 9578179 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042388 exon6 c.G493A p.E165K . . . RAB31 11031 broad.mit.edu 36 18 9804084 9804084 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006868 exon4 c.A269C p.K90T . . . NAPG 8774 broad.mit.edu 36 18 10536407 10536407 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C18orf8 29919 broad.mit.edu 36 18 19343247 19343247 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C18orf8 29919 broad.mit.edu 36 18 19353020 19353020 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LAMA3 3909 broad.mit.edu 36 18 19673900 19673900 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LAMA3 3909 broad.mit.edu 36 18 19705383 19705383 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MCART2 147407 broad.mit.edu 36 18 27594632 27594632 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRAPPC8 22878 broad.mit.edu 36 18 27704464 27704464 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF397 84307 broad.mit.edu 36 18 31076431 31076431 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MOCOS 55034 broad.mit.edu 36 18 32047323 32047323 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FLJ35776 649446 broad.mit.edu 36 18 3587204 3587204 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PIK3C3 5289 broad.mit.edu 36 18 37854593 37854593 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP5A1 498 broad.mit.edu 36 18 41922063 41922063 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RPL17 6139 broad.mit.edu 36 18 45272048 45272048 + 5'UTR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DCC 1630 broad.mit.edu 36 18 49102530 49102530 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DCC 1630 broad.mit.edu 36 18 49239836 49239836 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NEDD4L 23327 broad.mit.edu 36 18 54169267 54169267 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SEC11C 90701 broad.mit.edu 36 18 54976903 54976903 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDH20 28316 broad.mit.edu 36 18 57368443 57368443 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RTTN 25914 broad.mit.edu 36 18 65987064 65987064 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LAMA1 284217 broad.mit.edu 36 18 6970512 6970512 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FBXO15 201456 broad.mit.edu 36 18 69941580 69941580 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LAMA1 284217 broad.mit.edu 36 18 7039265 7039265 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C18orf62 284274 broad.mit.edu 36 18 71259718 71259718 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MBP 4155 broad.mit.edu 36 18 72829819 72829819 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . YES1 7525 broad.mit.edu 36 18 741701 741701 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CTDP1 9150 broad.mit.edu 36 18 75571324 75571324 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF600 162966 broad.mit.edu 36 19 57962626 57962627 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - T - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198457 exon3 c.195_196insA p.K65fs . . . OR7A10 390892 broad.mit.edu 36 19 14813379 14813379 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005190 exon1 c.311delT p.F104fs . . . ABCA7 10347 broad.mit.edu 36 19 1009663 1009663 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019112 exon38 c.G5196T p.K1732N . . . DNMT1 1786 broad.mit.edu 36 19 10111770 10111770 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001379 exon32 c.C3710T p.S1237L . . . ILF3 3609 broad.mit.edu 36 19 10642702 10642702 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153464 exon3 c.C56A p.S19Y . . . DNM2 1785 broad.mit.edu 36 19 10773967 10773967 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190716 exon12 c.C1426A p.L476I . . . SMARCA4 6597 broad.mit.edu 36 19 10961016 10961016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003072 exon7 c.G1142A p.R381Q . . . CCDC159 126075 broad.mit.edu 36 19 11325144 11325144 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080503 exon8 c.G585A p.K195K . . . CCDC151 115948 broad.mit.edu 36 19 11402756 11402756 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145045 exon2 c.C329A p.T110N . . . ZNF441 126068 broad.mit.edu 36 19 11752817 11752817 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152355 exon4 c.A1178C p.K393T . . . ZNF491 126069 broad.mit.edu 36 19 11778053 11778053 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152356 exon3 c.G285A p.R95R . . . ZNF491 126069 broad.mit.edu 36 19 11778722 11778722 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152356 exon3 c.A954C p.E318D . . . ZNF440 126070 broad.mit.edu 36 19 11804731 11804731 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152357 exon4 c.G1740T p.S580S . . . ZNF439 90594 broad.mit.edu 36 19 11839601 11839601 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152262 exon3 c.G717T p.E239D . . . ZNF439 90594 broad.mit.edu 36 19 11839669 11839669 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152262 exon3 c.G785T p.R262I . . . ZNF439 90594 broad.mit.edu 36 19 11840154 11840154 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152262 exon3 c.A1270C p.N424H . . . ZNF700 90592 broad.mit.edu 36 19 11920282 11920282 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144566 exon4 c.A443G p.D148G . . . ZNF700 90592 broad.mit.edu 36 19 11920434 11920434 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144566 exon4 c.T595G p.C199G . . . ZNF700 90592 broad.mit.edu 36 19 11920804 11920804 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144566 exon4 c.G965A p.R322H . . . ZNF700 90592 broad.mit.edu 36 19 11921566 11921566 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144566 exon4 c.C1727T p.A576V . . . ZNF625 90589 broad.mit.edu 36 19 12118020 12118020 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145233 exon4 c.C13A p.L5I . . . ZNF799 90576 broad.mit.edu 36 19 12362457 12362457 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080821 exon4 c.G1755T p.E585D . . . ZNF799 90576 broad.mit.edu 36 19 12363322 12363322 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080821 exon4 c.G890A p.R297Q . . . ZNF443 10224 broad.mit.edu 36 19 12403084 12403084 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005815 exon4 c.G902T p.R301I . . . ZNF443 10224 broad.mit.edu 36 19 12403152 12403152 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005815 exon4 c.G834T p.E278D . . . ZNF709 163051 broad.mit.edu 36 19 12436345 12436345 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152601 exon4 c.G1391T p.R464L . . . ZNF709 163051 broad.mit.edu 36 19 12436753 12436753 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152601 exon4 c.G983T p.R328I . . . ZNF564 163050 broad.mit.edu 36 19 12498516 12498516 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144976 exon4 c.G1406T p.R469I . . . ZNF564 163050 broad.mit.edu 36 19 12498939 12498939 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144976 exon4 c.A983G p.E328G . . . ZNF564 163050 broad.mit.edu 36 19 12499272 12499272 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144976 exon4 c.G650T p.R217I . . . ZNF490 57474 broad.mit.edu 36 19 12552324 12552324 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020714 exon5 c.G1565T p.R522M . . . MAN2B1 4125 broad.mit.edu 36 19 12636720 12636720 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000528 exon4 c.G516T p.M172I . . . HOOK2 29911 broad.mit.edu 36 19 12744482 12744482 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100176 exon6 c.G401T p.R134I . . . MAST1 22983 broad.mit.edu 36 19 12819856 12819856 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014975 exon7 c.G759T p.E253D . . . SYCE2 256126 broad.mit.edu 36 19 12876377 12876377 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105578 exon3 c.G235A p.E79K . . . MUM1 84939 broad.mit.edu 36 19 1311462 1311462 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032853 exon5 c.G545A p.R182K . . . CACNA1A 773 broad.mit.edu 36 19 13275397 13275397 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127222 exon17 c.C2135A p.A712D . . . ZSWIM4 65249 broad.mit.edu 36 19 13802063 13802063 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023072 exon13 c.G2169T p.E723D . . . CD97 976 broad.mit.edu 36 19 14368207 14368207 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025160 exon5 c.G400A p.V134I . . . PKN1 5585 broad.mit.edu 36 19 14435934 14435934 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213560 exon12 c.C1718T p.S573L . . . EMR3 84658 broad.mit.edu 36 19 14610127 14610127 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032571 exon11 c.C1274T p.A425V . . . EMR3 84658 broad.mit.edu 36 19 14626878 14626878 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032571 exon6 c.C493A p.L165I . . . EMR3 84658 broad.mit.edu 36 19 14633866 14633866 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032571 exon4 c.C264T p.V88V . . . ZNF333 84449 broad.mit.edu 36 19 14690331 14690331 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032433 exon12 c.G1192T p.E398X . . . OR7C1 26664 broad.mit.edu 36 19 14771661 14771661 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198944 exon1 c.C288T p.G96G . . . OR7C2 26658 broad.mit.edu 36 19 14913758 14913758 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012377 exon1 c.T458C p.V153A . . . OR7C2 26658 broad.mit.edu 36 19 14913825 14913825 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012377 exon1 c.G525A p.P175P . . . SYDE1 85360 broad.mit.edu 36 19 15085460 15085460 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033025 exon8 c.G1894A p.E632K . . . CYP4F22 126410 broad.mit.edu 36 19 15512471 15512471 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173483 exon8 c.G882A p.W294X . . . CYP4F8 11283 broad.mit.edu 36 19 15591531 15591531 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007253 exon5 c.C483T p.S161S . . . CYP4F8 11283 broad.mit.edu 36 19 15600620 15600620 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007253 exon12 c.C1363A p.L455I . . . OR10H1 26539 broad.mit.edu 36 19 15779780 15779780 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013940 exon1 c.T68A p.L23H . . . CYP4F2 8529 broad.mit.edu 36 19 15850717 15850717 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082 exon13 c.C1427T p.A476V . . . CYP4F2 8529 broad.mit.edu 36 19 15867435 15867435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001082 exon3 c.G224T p.R75I . . . OR10H4 126541 broad.mit.edu 36 19 15921354 15921354 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004465 exon1 c.C537A p.F179L . . . CALR3 125972 broad.mit.edu 36 19 16462306 16462306 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145046 exon3 c.C269T p.T90I . . . NWD1 284434 broad.mit.edu 36 19 16721402 16721402 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007525 exon6 c.G949A p.E317K . . . SIN3B 23309 broad.mit.edu 36 19 16824895 16824895 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015260 exon7 c.C865T p.R289C . . . SIN3B 23309 broad.mit.edu 36 19 16835595 16835595 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015260 exon11 c.C1467T p.D489D . . . CPAMD8 27151 broad.mit.edu 36 19 16899885 16899885 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015692 exon25 c.G3445C p.A1149P . . . CPAMD8 27151 broad.mit.edu 36 19 16974097 16974097 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015692 exon9 c.A878G p.E293G . . . MYO9B 4650 broad.mit.edu 36 19 17125832 17125832 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130065 exon5 c.G1054T p.E352X . . . USHBP1 83878 broad.mit.edu 36 19 17234556 17234556 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031941 exon4 c.C447T p.F149F . . . UNC13A 23025 broad.mit.edu 36 19 17604591 17604591 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080421 exon27 c.C3428T p.A1143V . . . UNC13A 23025 broad.mit.edu 36 19 17613275 17613275 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080421 exon20 c.G2563A p.D855N . . . UNC13A 23025 broad.mit.edu 36 19 17646522 17646522 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080421 exon3 c.G96A p.K32K . . . FCHO1 23149 broad.mit.edu 36 19 17738511 17738511 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161358 exon6 c.C228A p.V76V . . . B3GNT3 10331 broad.mit.edu 36 19 17783427 17783427 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014256 exon3 c.C615T p.F205F . . . IL12RB1 3594 broad.mit.edu 36 19 18041498 18041498 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005535 exon10 c.C1047T p.V349V . . . UPF1 5976 broad.mit.edu 36 19 18826416 18826416 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002911 exon9 c.G1163A p.G388D . . . UPF1 5976 broad.mit.edu 36 19 18835259 18835259 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002911 exon19 c.C2613A p.I871I . . . SUGP2 10147 broad.mit.edu 36 19 19002867 19002867 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014884 exon2 c.G14A p.R5Q . . . ZNF101 94039 broad.mit.edu 36 19 19651703 19651703 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033204 exon4 c.G905T p.R302I . . . ZNF14 7561 broad.mit.edu 36 19 19684039 19684039 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021030 exon4 c.C1051T p.R351X . . . ZNF506 440515 broad.mit.edu 36 19 19766835 19766835 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145404 exon3 c.T765C p.C255C . . . ZNF506 440515 broad.mit.edu 36 19 19767097 19767097 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145404 exon3 c.G503A p.R168H . . . ZNF253 56242 broad.mit.edu 36 19 19850320 19850320 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021047 exon2 c.G34T p.E12X . . . ZNF682 91120 broad.mit.edu 36 19 19978756 19978756 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033196 exon4 c.C555T p.H185H . . . ZNF85 7639 broad.mit.edu 36 19 20923825 20923825 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003429 exon4 c.G665T p.R222I . . . ZNF430 80264 broad.mit.edu 36 19 21031712 21031712 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025189 exon5 c.G758T p.R253I . . . ZNF714 148206 broad.mit.edu 36 19 21092876 21092876 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182515 exon5 c.C1566T p.I522I . . . ZNF431 170959 broad.mit.edu 36 19 21158576 21158576 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133473 exon5 c.G1630T p.E544X . . . ZNF708 7562 broad.mit.edu 36 19 21267971 21267971 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021269 exon4 c.A1637G p.N546S . . . ZNF708 7562 broad.mit.edu 36 19 21268109 21268109 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021269 exon4 c.G1499A p.G500E . . . ZNF708 7562 broad.mit.edu 36 19 21268973 21268973 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021269 exon4 c.C635T p.T212M . . . ZNF429 353088 broad.mit.edu 36 19 21512010 21512010 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001415 exon4 c.A1315G p.T439A . . . ZNF43 7594 broad.mit.edu 36 19 21782609 21782609 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003423 exon4 c.C2070A p.S690S . . . ZNF43 7594 broad.mit.edu 36 19 21783542 21783542 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003423 exon4 c.T1137C p.F379F . . . ZNF43 7594 broad.mit.edu 36 19 21784344 21784344 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003423 exon4 c.T335C p.V112A . . . ZNF208 7757 broad.mit.edu 36 19 21947036 21947036 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007153 exon4 c.G2640T p.K880N . . . ZNF208 7757 broad.mit.edu 36 19 21947855 21947855 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007153 exon4 c.A1821T p.K607N . . . ZNF257 113835 broad.mit.edu 36 19 22062961 22062961 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.G569A p.R190Q . . . ZNF257 113835 broad.mit.edu 36 19 22063390 22063390 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.G998A p.R333Q . . . ZNF257 113835 broad.mit.edu 36 19 22063657 22063657 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.A1265C p.K422T . . . ZNF257 113835 broad.mit.edu 36 19 22064005 22064005 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033468 exon4 c.C1613T p.A538V . . . ZNF676 163223 broad.mit.edu 36 19 22154887 22154887 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001411 exon3 c.T1472C p.I491T . . . ZNF676 163223 broad.mit.edu 36 19 22155652 22155652 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001411 exon3 c.G707A p.R236Q . . . ZNF676 163223 broad.mit.edu 36 19 22167706 22167706 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001411 exon2 c.A82C p.K28Q . . . ZNF98 148198 broad.mit.edu 36 19 22366347 22366347 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098626 exon4 c.G1530T p.M510I . . . ZNF98 148198 broad.mit.edu 36 19 22367188 22367188 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098626 exon4 c.G689T p.R230I . . . ZNF98 148198 broad.mit.edu 36 19 22367568 22367568 + Nonsense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098626 exon4 c.T309G p.Y103X . . . ZNF492 57615 broad.mit.edu 36 19 22639381 22639381 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020855 exon4 c.G1070T p.R357I . . . ZNF99 7652 broad.mit.edu 36 19 22731949 22731949 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon6 c.C2222T p.T741I . . . ZNF99 7652 broad.mit.edu 36 19 22732631 22732631 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon5 c.G1647T p.E549D . . . ZNF99 7652 broad.mit.edu 36 19 22733242 22733242 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon5 c.T1036G p.F346V . . . ZNF99 7652 broad.mit.edu 36 19 22733434 22733434 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon5 c.G844T p.E282X . . . ZNF99 7652 broad.mit.edu 36 19 22734154 22734154 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080409 exon4 c.C460A p.L154I . . . ZNF91 7644 broad.mit.edu 36 19 23334412 23334412 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003430 exon4 c.G3209T p.R1070I . . . ZNF91 7644 broad.mit.edu 36 19 23336829 23336829 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003430 exon4 c.A792C p.K264N . . . ZNF675 171392 broad.mit.edu 36 19 23628377 23628377 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138330 exon4 c.G1198T p.E400X . . . ZNF675 171392 broad.mit.edu 36 19 23628975 23628975 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138330 exon4 c.C600T p.C200C . . . ZNF681 148213 broad.mit.edu 36 19 23729508 23729508 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138286 exon3 c.G183A p.E61E . . . GNG7 2788 broad.mit.edu 36 19 2466025 2466025 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052847 exon5 c.T202G p.L68V . . . GNA15 2769 broad.mit.edu 36 19 3106875 3106875 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002068 exon5 c.C669T p.F223F . . . UQCRFS1 7386 broad.mit.edu 36 19 34390305 34390305 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006003 exon2 c.T815C p.I272T . . . DOHH 83475 broad.mit.edu 36 19 3447671 3447671 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031304 exon2 c.G142A p.D48N . . . TSHZ3 57616 broad.mit.edu 36 19 36460472 36460472 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020856 exon2 c.G2067T p.E689D . . . TSHZ3 57616 broad.mit.edu 36 19 36461287 36461287 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020856 exon2 c.G1252A p.A418T . . . TSHZ3 57616 broad.mit.edu 36 19 36461599 36461599 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020856 exon2 c.G940A p.A314T . . . TSHZ3 57616 broad.mit.edu 36 19 36461925 36461925 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020856 exon2 c.G614A p.G205D . . . ZNF507 22847 broad.mit.edu 36 19 37537210 37537210 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136156 exon3 c.C1634T p.S545L . . . SLC7A9 11136 broad.mit.edu 36 19 38015985 38015985 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126335 exon12 c.T1309C p.Y437H . . . CCDC123 84902 broad.mit.edu 36 19 38082686 38082686 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032816 exon16 c.G1792A p.E598K . . . RHPN2 85415 broad.mit.edu 36 19 38185699 38185699 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033103 exon8 c.G808A p.D270N . . . ATCAY 85300 broad.mit.edu 36 19 3856547 3856547 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033064 exon4 c.C252A p.F84L . . . ATCAY 85300 broad.mit.edu 36 19 3861830 3861830 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033064 exon8 c.T809C p.I270T . . . KIAA0355 9710 broad.mit.edu 36 19 39513062 39513062 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014686 exon7 c.G1233A p.A411A . . . KIAA0355 9710 broad.mit.edu 36 19 39524194 39524194 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014686 exon10 c.C1515T p.I505I . . . UBA2 10054 broad.mit.edu 36 19 39634736 39634736 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005499 exon10 c.G882A p.T294T . . . UBA2 10054 broad.mit.edu 36 19 39637079 39637079 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005499 exon11 c.G1113T p.K371N . . . ZNF30 90075 broad.mit.edu 36 19 40126031 40126031 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099437 exon5 c.T324G p.S108S . . . ZNF792 126375 broad.mit.edu 36 19 40142250 40142250 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175872 exon4 c.G349T p.A117S . . . ZNF792 126375 broad.mit.edu 36 19 40143732 40143732 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175872 exon2 c.G40A p.V14M . . . MAG 4099 broad.mit.edu 36 19 40485204 40485204 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199216 exon7 c.G909T p.K303N . . . MAG 4099 broad.mit.edu 36 19 40496090 40496090 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199216 exon11 c.G1699T p.E567X . . . CD22 933 broad.mit.edu 36 19 40523796 40523796 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185101 exon5 c.C891T p.N297N . . . ZBTB32 27033 broad.mit.edu 36 19 40897661 40897661 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014383 exon2 c.G293T p.R98M . . . ZBTB32 27033 broad.mit.edu 36 19 40898048 40898048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014383 exon2 c.G680A p.R227H . . . MLL4 9757 broad.mit.edu 36 19 40902528 40902528 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014727 exon3 c.C439T p.R147X . . . C19orf55 148137 broad.mit.edu 36 19 40947815 40947815 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039887 exon7 c.G667T p.D223Y . . . ARHGAP33 115703 broad.mit.edu 36 19 40966969 40966969 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052948 exon16 c.C1477T p.R493W . . . KIRREL2 84063 broad.mit.edu 36 19 41041527 41041527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199180 exon4 c.G443A p.S148N . . . KIRREL2 84063 broad.mit.edu 36 19 41043366 41043366 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199180 exon7 c.C885T p.N295N . . . APLP1 333 broad.mit.edu 36 19 41054681 41054681 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024807 exon6 c.G753A p.Q251Q . . . APLP1 333 broad.mit.edu 36 19 41054771 41054771 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024807 exon6 c.C843T p.V281V . . . ZNF529 57711 broad.mit.edu 36 19 41729807 41729807 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020951 exon5 c.G1493T p.R498I . . . ZNF382 84911 broad.mit.edu 36 19 41809019 41809019 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032825 exon5 c.G380A p.R127H . . . ZNF382 84911 broad.mit.edu 36 19 41809586 41809586 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032825 exon5 c.G947A p.R316Q . . . EBI3 10148 broad.mit.edu 36 19 4188074 4188074 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005755 exon5 c.C679A p.L227M . . . ZNF567 163081 broad.mit.edu 36 19 41902473 41902473 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152603 exon4 c.C914T p.S305L . . . ZNF567 163081 broad.mit.edu 36 19 41903208 41903208 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152603 exon4 c.G1649T p.R550I . . . ZNF790 388536 broad.mit.edu 36 19 42002097 42002097 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206894 exon5 c.G989T p.R330I . . . ZNF790 388536 broad.mit.edu 36 19 42002829 42002829 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_206894 exon5 c.A257C p.K86T . . . ZNF345 25850 broad.mit.edu 36 19 42059733 42059733 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003419 exon3 c.G161T p.R54I . . . ZNF345 25850 broad.mit.edu 36 19 42060311 42060311 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003419 exon3 c.C739T p.R247W . . . ZNF829 374899 broad.mit.edu 36 19 42074707 42074707 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037232 exon6 c.G826A p.A276T . . . ZNF829 374899 broad.mit.edu 36 19 42091166 42091166 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037232 exon4 c.C132A p.F44L . . . ZNF829 374899 broad.mit.edu 36 19 42097896 42097896 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037232 exon2 c.C14A p.P5H . . . ZNF568 374900 broad.mit.edu 36 19 42132972 42132972 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198539 exon7 c.G1077T p.E359D . . . ZNF420 147923 broad.mit.edu 36 19 42311189 42311189 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144689 exon5 c.C1456T p.R486C . . . ZNF585A 199704 broad.mit.edu 36 19 42334848 42334848 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199126 exon6 c.G1628A p.R543K . . . ZNF585A 199704 broad.mit.edu 36 19 42335653 42335653 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199126 exon6 c.G823A p.E275K . . . ZNF585B 92285 broad.mit.edu 36 19 42368988 42368988 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152279 exon5 c.A1291C p.I431L . . . ZNF585B 92285 broad.mit.edu 36 19 42369982 42369982 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152279 exon5 c.G297T p.E99D . . . HKR1 284459 broad.mit.edu 36 19 42545562 42545562 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_181786 exon6 c.C1025T p.S342L . . . ZNF527 84503 broad.mit.edu 36 19 42572573 42572573 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032453 exon5 c.C1782A p.V594V . . . ZNF569 148266 broad.mit.edu 36 19 42595439 42595439 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152484 exon6 c.G1961T p.R654I . . . ZNF569 148266 broad.mit.edu 36 19 42595746 42595746 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152484 exon6 c.T1654C p.C552R . . . ZNF569 148266 broad.mit.edu 36 19 42596486 42596486 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152484 exon6 c.A914G p.K305R . . . ZNF571 51276 broad.mit.edu 36 19 42748395 42748395 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016536 exon4 c.G775A p.A259T . . . ZNF540 163255 broad.mit.edu 36 19 42795565 42795565 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172226 exon4 c.G1448T p.R483I . . . ZFP30 22835 broad.mit.edu 36 19 42818422 42818422 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014898 exon6 c.G860A p.R287Q . . . ZNF781 163115 broad.mit.edu 36 19 42852732 42852732 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152605 exon4 c.G158A p.R53Q . . . ZNF607 84775 broad.mit.edu 36 19 42882624 42882624 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032689 exon5 c.G248T p.R83I . . . ZNF573 126231 broad.mit.edu 36 19 42921391 42921391 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172691 exon5 c.G1834T p.E612X . . . CATSPERG 57828 broad.mit.edu 36 19 43549759 43549759 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021185 exon23 c.A2737G p.N913D . . . RASGRP4 115727 broad.mit.edu 36 19 43595152 43595152 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146206 exon10 c.C1113T p.F371F . . . RASGRP4 115727 broad.mit.edu 36 19 43602432 43602432 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146206 exon6 c.C571T p.R191C . . . RYR1 6261 broad.mit.edu 36 19 43671674 43671674 + Silent SNP C T T rs61750975 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000540 exon35 c.C5565T p.G1855G . . . RYR1 6261 broad.mit.edu 36 19 43672573 43672573 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000540 exon36 c.G5832A p.E1944E . . . RYR1 6261 broad.mit.edu 36 19 43694838 43694838 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000540 exon63 c.C9347T p.S3116L . . . RYR1 6261 broad.mit.edu 36 19 43754501 43754501 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000540 exon95 c.C13749A p.V4583V . . . HNRNPL 3191 broad.mit.edu 36 19 44020931 44020931 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001533 exon10 c.C1503T p.N501N . . . UBXN6 80700 broad.mit.edu 36 19 4404935 4404935 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025241 exon2 c.G239A p.R80Q . . . FBXO27 126433 broad.mit.edu 36 19 44207912 44207912 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178820 exon6 c.C831T p.I277I . . . PAPL 390928 broad.mit.edu 36 19 44281445 44281445 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004318 exon4 c.C328T p.R110C . . . NCCRP1 342897 broad.mit.edu 36 19 44383188 44383188 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001414 exon6 c.G780A p.R260R . . . IL28B 282617 broad.mit.edu 36 19 44426169 44426169 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172139 exon5 c.C534A p.L178L . . . GMFG 9535 broad.mit.edu 36 19 44517929 44517929 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004877 exon2 c.A86C p.N29T . . . SUPT5H 6829 broad.mit.edu 36 19 44641346 44641346 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003169 exon5 c.G368A p.R123H . . . DLL3 10683 broad.mit.edu 36 19 44687832 44687832 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203486 exon6 c.G994T p.D332Y . . . EID2 163126 broad.mit.edu 36 19 44722278 44722278 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153232 exon1 c.C282T p.S94S . . . LRG1 116844 broad.mit.edu 36 19 4489472 4489472 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052972 exon2 c.G524A p.R175H . . . FCGBP 8857 broad.mit.edu 36 19 45115935 45115935 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003890 exon4 c.A2108C p.D703A . . . ZNF546 339327 broad.mit.edu 36 19 45211432 45211432 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.A415G p.T139A . . . ZNF546 339327 broad.mit.edu 36 19 45211921 45211921 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.G904A p.E302K . . . ZNF546 339327 broad.mit.edu 36 19 45212257 45212257 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.G1240A p.E414K . . . ZNF546 339327 broad.mit.edu 36 19 45212651 45212651 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178544 exon7 c.G1634T p.R545I . . . ZNF546 339327 broad.mit.edu 36 19 45212873 45212873 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.G1856A p.R619Q . . . ZNF546 339327 broad.mit.edu 36 19 45212987 45212987 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178544 exon7 c.G1970T p.R657I . . . ZNF780B 163131 broad.mit.edu 36 19 45232525 45232525 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005851 exon5 c.C2081T p.A694V . . . ZNF780A 284323 broad.mit.edu 36 19 45272546 45272546 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010880 exon6 c.G1643A p.R548Q . . . ZNF780A 284323 broad.mit.edu 36 19 45273502 45273502 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010880 exon6 c.C687A p.A229A . . . ZNF780A 284323 broad.mit.edu 36 19 45273581 45273581 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010880 exon6 c.G608A p.R203Q . . . AKT2 208 broad.mit.edu 36 19 45439802 45439802 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001626 exon6 c.C456T p.F152F . . . PLD3 23646 broad.mit.edu 36 19 45574403 45574403 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031696 exon11 c.G1067A p.R356H . . . SHKBP1 92799 broad.mit.edu 36 19 45788843 45788843 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138392 exon18 c.C2014T p.R672W . . . LTBP4 8425 broad.mit.edu 36 19 45824768 45824768 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042544 exon31 c.C4234A p.P1412T . . . ITPKC 80271 broad.mit.edu 36 19 45927105 45927105 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025194 exon3 c.G1414T p.D472Y . . . CYP2A6 1548 broad.mit.edu 36 19 46043728 46043728 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000762 exon6 c.C946T p.L316L . . . CYP2A6 1548 broad.mit.edu 36 19 46044782 46044782 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000762 exon5 c.C669A p.F223L . . . CYP2A7 1549 broad.mit.edu 36 19 46077888 46077888 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000764 exon4 c.C595A p.L199M . . . CYP2A13 1553 broad.mit.edu 36 19 46291401 46291401 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000766 exon6 c.C858A p.F286L . . . CYP2S1 29785 broad.mit.edu 36 19 46401245 46401245 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030622 exon7 c.A1027C p.S343R . . . DPP9 91039 broad.mit.edu 36 19 4653059 4653059 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139159 exon9 c.C992T p.S331L . . . BCKDHA 593 broad.mit.edu 36 19 46608529 46608529 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164783 exon2 c.G256T p.G86C . . . CEACAM7 1087 broad.mit.edu 36 19 46873213 46873213 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006890 exon4 c.G765T p.M255I . . . CEACAM5 1048 broad.mit.edu 36 19 46910978 46910978 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004363 exon3 c.C673T p.R225C . . . CEACAM5 1048 broad.mit.edu 36 19 46916828 46916828 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004363 exon8 c.C1918A p.L640I . . . ATP1A3 478 broad.mit.edu 36 19 47177520 47177520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152296 exon11 c.C1411T p.P471S . . . GRIK5 2901 broad.mit.edu 36 19 47249851 47249851 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002088 exon9 c.G1127A p.R376H . . . ZNF574 64763 broad.mit.edu 36 19 47275433 47275433 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022752 exon2 c.C835T p.R279C . . . PRR19 284338 broad.mit.edu 36 19 47506048 47506048 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199285 exon2 c.C472T p.P158S . . . TMEM145 284339 broad.mit.edu 36 19 47511244 47511244 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173633 exon7 c.C570T p.Y190Y . . . MEGF8 1954 broad.mit.edu 36 19 47532855 47532855 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001410 exon7 c.C1301T p.T434M . . . CEACAM1 634 broad.mit.edu 36 19 47707593 47707593 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001712 exon7 c.G1404A p.E468E . . . PSG3 5671 broad.mit.edu 36 19 47934992 47934992 + Missense_Mutation SNP G T T rs35100282 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021016 exon2 c.C154A p.L52I . . . PSG6 5675 broad.mit.edu 36 19 48106765 48106765 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031850 exon3 c.G513T p.E171D . . . PSG7 5676 broad.mit.edu 36 19 48125463 48125463 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002783 exon3 c.G680A p.R227H . . . IRGC 56269 broad.mit.edu 36 19 48915478 48915478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019612 exon2 c.G928A p.D310N . . . ZNF283 284349 broad.mit.edu 36 19 49043098 49043098 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181845 exon7 c.G505T p.G169X . . . ZNF283 284349 broad.mit.edu 36 19 49043861 49043861 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181845 exon7 c.G1268T p.R423I . . . ZNF404 342908 broad.mit.edu 36 19 49068857 49068857 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033719 exon2 c.T1340G p.L447R . . . ZNF221 7638 broad.mit.edu 36 19 49162921 49162921 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013359 exon6 c.G1427A p.R476K . . . ZNF230 7773 broad.mit.edu 36 19 49205114 49205114 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006300 exon4 c.G181T p.E61X . . . ZNF222 7673 broad.mit.edu 36 19 49228102 49228102 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129996 exon4 c.T555C p.H185H . . . ZNF222 7673 broad.mit.edu 36 19 49228513 49228513 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001129996 exon4 c.G966T p.E322D . . . ZNF224 7767 broad.mit.edu 36 19 49304067 49304067 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013398 exon6 c.C1914T p.F638F . . . ZNF226 7769 broad.mit.edu 36 19 49372487 49372487 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032372 exon6 c.G1232T p.R411I . . . MARK4 57787 broad.mit.edu 36 19 50458261 50458261 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199867 exon3 c.G303A p.Q101Q . . . GPR4 2828 broad.mit.edu 36 19 50786412 50786412 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005282 exon2 c.C553T p.R185W . . . SNRPD2 6633 broad.mit.edu 36 19 50883490 50883490 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004597 exon2 c.C177T p.F59F . . . SYMPK 8189 broad.mit.edu 36 19 51022688 51022688 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004819 exon16 c.G2101T p.D701Y . . . SYMPK 8189 broad.mit.edu 36 19 51039167 51039167 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004819 exon8 c.T808C p.F270L . . . SYMPK 8189 broad.mit.edu 36 19 51043930 51043930 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004819 exon6 c.A344G p.N115S . . . HIF3A 64344 broad.mit.edu 36 19 51517062 51517062 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152795 exon10 c.C1334T p.S445L . . . PPP5C 5536 broad.mit.edu 36 19 51582230 51582230 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006247 exon8 c.C945T p.F315F . . . GRLF1 2909 broad.mit.edu 36 19 52116120 52116120 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004491 exon1 c.G2348A p.R783Q . . . GRLF1 2909 broad.mit.edu 36 19 52117205 52117205 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004491 exon1 c.C3433T p.R1145X . . . CCDC9 26093 broad.mit.edu 36 19 52455691 52455691 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015603 exon5 c.A217G p.N73D . . . EHD2 30846 broad.mit.edu 36 19 52936429 52936429 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014601 exon6 c.C1560T p.H520H . . . TPRX1 284355 broad.mit.edu 36 19 52997051 52997051 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198479 exon2 c.C1029A p.F343L . . . PLA2G4C 8605 broad.mit.edu 36 19 53262868 53262868 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159322 exon13 c.A1124G p.Y375C . . . LIG1 3978 broad.mit.edu 36 19 53352207 53352207 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000234 exon5 c.G246T p.K82N . . . ZNF114 163071 broad.mit.edu 36 19 53481201 53481201 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153608 exon5 c.A508G p.T170A . . . KDELR1 10945 broad.mit.edu 36 19 53579428 53579428 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006801 exon4 c.C475T p.R159C . . . GRIN2D 2906 broad.mit.edu 36 19 53637226 53637226 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000836 exon12 c.C2448T p.I816I . . . CA11 770 broad.mit.edu 36 19 53834660 53834660 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001217 exon6 c.C598T p.R200C . . . FUT1 2523 broad.mit.edu 36 19 53945786 53945786 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000148 exon4 c.G565A p.D189N . . . HRC 3270 broad.mit.edu 36 19 54349521 54349521 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002152 exon1 c.C786A p.V262V . . . SLC6A16 28968 broad.mit.edu 36 19 54485818 54485818 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014037 exon11 c.G1797A p.T599T . . . CD37 951 broad.mit.edu 36 19 54530800 54530800 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001774 exon2 c.C87A p.I29I . . . TEAD2 8463 broad.mit.edu 36 19 54536403 54536403 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003598 exon12 c.T1334C p.V445A . . . TEAD2 8463 broad.mit.edu 36 19 54542262 54542262 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003598 exon9 c.C906A p.F302L . . . TSKS 60385 broad.mit.edu 36 19 54939389 54939389 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021733 exon8 c.C1272T p.F424F . . . TSKS 60385 broad.mit.edu 36 19 54958157 54958157 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021733 exon1 c.T160C p.S54P . . . SIGLEC11 114132 broad.mit.edu 36 19 55147390 55147390 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135163 exon8 c.C1437T p.F479F . . . SIGLEC11 114132 broad.mit.edu 36 19 55154116 55154116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135163 exon6 c.C1088T p.S363F . . . MYH14 79784 broad.mit.edu 36 19 55444812 55444812 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077186 exon14 c.T1576C p.Y526H . . . SAFB2 9667 broad.mit.edu 36 19 5555658 5555658 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014649 exon11 c.G1495A p.E499K . . . MYBPC2 4606 broad.mit.edu 36 19 55638583 55638583 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004533 exon10 c.G923A p.G308D . . . LRRC4B 94030 broad.mit.edu 36 19 55714173 55714173 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080457 exon3 c.C609T p.F203F . . . KLK1 3816 broad.mit.edu 36 19 56014271 56014271 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002257 exon5 c.G780T p.E260D . . . KLK1 3816 broad.mit.edu 36 19 56015041 56015041 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002257 exon4 c.A559C p.K187Q . . . KLK1 3816 broad.mit.edu 36 19 56016926 56016926 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002257 exon2 c.G60A p.P20P . . . KLK3 354 broad.mit.edu 36 19 56051411 56051411 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030048 exon2 c.C150T p.C50C . . . KLK4 9622 broad.mit.edu 36 19 56104479 56104479 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004917 exon2 c.C65A p.S22X . . . SIGLEC9 27180 broad.mit.edu 36 19 56321160 56321160 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198558 exon3 c.G711A p.Q237Q . . . SIGLEC7 27036 broad.mit.edu 36 19 56337744 56337744 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014385 exon1 c.G306T p.Q102H . . . ETFB 2109 broad.mit.edu 36 19 56548323 56548323 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014763 exon2 c.G523T p.D175Y . . . SIGLEC10 89790 broad.mit.edu 36 19 56608843 56608843 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171159 exon9 c.C1297T p.P433S . . . CEACAM18 729767 broad.mit.edu 36 19 56675455 56675455 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080405 exon3 c.A292C p.T98P . . . SIGLEC5 8778 broad.mit.edu 36 19 56807348 56807348 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003830 exon9 c.A1604G p.D535G . . . SIGLEC5 8778 broad.mit.edu 36 19 56824572 56824572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003830 exon3 c.C551T p.A184V . . . ZNF577 84765 broad.mit.edu 36 19 57068186 57068186 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032679 exon7 c.G869T p.R290I . . . ZNF350 59348 broad.mit.edu 36 19 57160407 57160407 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021632 exon5 c.G1111T p.E371X . . . ZNF615 284370 broad.mit.edu 36 19 57188104 57188104 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198480 exon6 c.G2037A p.P679P . . . ZNF615 284370 broad.mit.edu 36 19 57188714 57188714 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198480 exon6 c.G1427A p.R476Q . . . ZNF614 80110 broad.mit.edu 36 19 57211659 57211659 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025040 exon5 c.G1004A p.R335Q . . . ZNF614 80110 broad.mit.edu 36 19 57213124 57213124 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025040 exon4 c.G187T p.G63X . . . ZNF432 9668 broad.mit.edu 36 19 57229902 57229902 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014650 exon5 c.G842A p.R281Q . . . ZNF432 9668 broad.mit.edu 36 19 57230248 57230248 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014650 exon5 c.C496T p.L166F . . . ZNF616 90317 broad.mit.edu 36 19 57310087 57310087 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178523 exon4 c.G2142T p.E714D . . . ZNF836 162962 broad.mit.edu 36 19 57351572 57351572 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102657 exon5 c.A1176G p.G392G . . . ZNF836 162962 broad.mit.edu 36 19 57352460 57352460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102657 exon5 c.G288T p.Q96H . . . ZNF480 147657 broad.mit.edu 36 19 57517487 57517487 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144684 exon5 c.G1172T p.R391I . . . ZNF610 162963 broad.mit.edu 36 19 57548777 57548777 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161425 exon4 c.G94A p.E32K . . . ZNF610 162963 broad.mit.edu 36 19 57561198 57561198 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161425 exon6 c.G755T p.R252I . . . ZNF610 162963 broad.mit.edu 36 19 57561569 57561569 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161425 exon6 c.G1126A p.E376K . . . ZNF880 400713 broad.mit.edu 36 19 57579473 57579473 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145434 exon4 c.C828A p.V276V . . . ZNF528 84436 broad.mit.edu 36 19 57611639 57611639 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032423 exon7 c.G1722T p.K574N . . . ZNF534 147658 broad.mit.edu 36 19 57632844 57632844 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143938 exon4 c.A319G p.N107D . . . ZNF808 388558 broad.mit.edu 36 19 57750497 57750497 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039886 exon5 c.G2516T p.R839I . . . ZNF83 55769 broad.mit.edu 36 19 57809378 57809378 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105550 exon5 c.G252T p.E84D . . . ZNF611 81856 broad.mit.edu 36 19 57900460 57900460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161499 exon6 c.G1660T p.A554S . . . ZNF600 162966 broad.mit.edu 36 19 57960848 57960848 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198457 exon3 c.G1973T p.R658I . . . ZNF600 162966 broad.mit.edu 36 19 57961829 57961829 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198457 exon3 c.A992G p.K331R . . . ZNF28 7576 broad.mit.edu 36 19 57995114 57995114 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006969 exon4 c.G1796T p.R599I . . . ZNF28 7576 broad.mit.edu 36 19 57995329 57995329 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006969 exon4 c.A1581T p.E527D . . . ZNF28 7576 broad.mit.edu 36 19 57996472 57996472 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006969 exon4 c.G438A p.S146S . . . ZNF468 90333 broad.mit.edu 36 19 58036690 58036690 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199132 exon5 c.C510A p.S170S . . . ZNF320 162967 broad.mit.edu 36 19 58075902 58075902 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207333 exon4 c.G1289T p.R430I . . . ZNF320 162967 broad.mit.edu 36 19 58076092 58076092 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207333 exon4 c.C1099T p.R367W . . . ZNF816 125893 broad.mit.edu 36 19 58145785 58145785 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031665 exon5 c.G1055A p.R352Q . . . ZNF347 84671 broad.mit.edu 36 19 58336303 58336303 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032584 exon5 c.T1590G p.N530K . . . ZNF347 84671 broad.mit.edu 36 19 58337106 58337106 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032584 exon5 c.T787G p.S263A . . . ZNF665 79788 broad.mit.edu 36 19 58360021 58360021 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024733 exon4 c.A1534C p.K512Q . . . ZNF665 79788 broad.mit.edu 36 19 58360457 58360457 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024733 exon4 c.A1098C p.R366R . . . ZNF665 79788 broad.mit.edu 36 19 58361046 58361046 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024733 exon4 c.C509A p.S170Y . . . ZNF677 342926 broad.mit.edu 36 19 58432085 58432085 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182609 exon5 c.A1707G p.K569K . . . ZNF677 342926 broad.mit.edu 36 19 58432340 58432340 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182609 exon5 c.G1452T p.E484D . . . VN1R2 317701 broad.mit.edu 36 19 58453813 58453813 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173856 exon1 c.G373T p.D125Y . . . VN1R4 317703 broad.mit.edu 36 19 58462499 58462499 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173857 exon1 c.C232A p.L78I . . . BIRC8 112401 broad.mit.edu 36 19 58484995 58484995 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033341 exon1 c.C445A p.L149I . . . ZNF761 388561 broad.mit.edu 36 19 58651030 58651030 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008401 exon6 c.G1458T p.E486D . . . RANBP3 8498 broad.mit.edu 36 19 5874291 5874291 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003624 exon13 c.G1108A p.A370T . . . ZNF331 55422 broad.mit.edu 36 19 58772662 58772662 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079906 exon6 c.G1036A p.E346K . . . ZNF331 55422 broad.mit.edu 36 19 58772814 58772814 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079906 exon6 c.G1188A p.S396S . . . NLRP12 91662 broad.mit.edu 36 19 59005077 59005077 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144687 exon3 c.T1648C p.F550L . . . NLRP12 91662 broad.mit.edu 36 19 59006288 59006288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144687 exon3 c.G437A p.R146H . . . PRKCG 5582 broad.mit.edu 36 19 59093545 59093545 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002739 exon11 c.G1132A p.A378T . . . VSTM1 284415 broad.mit.edu 36 19 59253460 59253460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198481 exon3 c.G267T p.K89N . . . MBOAT7 79143 broad.mit.edu 36 19 59369881 59369881 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146056 exon6 c.A869G p.Y290C . . . LILRB5 10990 broad.mit.edu 36 19 59452169 59452169 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081442 exon3 c.C350T p.A117V . . . LILRA5 353514 broad.mit.edu 36 19 59514566 59514566 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181986 exon4 c.C606A p.C202X . . . LAIR1 3903 broad.mit.edu 36 19 59558722 59558722 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021706 exon9 c.G780T p.E260D . . . LENG8 114823 broad.mit.edu 36 19 59661150 59661150 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052925 exon14 c.G1959T p.E653D . . . LAIR2 3904 broad.mit.edu 36 19 59711055 59711055 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002288 exon3 c.G208T p.D70Y . . . LILRA1 11024 broad.mit.edu 36 19 59797990 59797990 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006863 exon4 c.C119T p.T40I . . . LILRA1 11024 broad.mit.edu 36 19 59798609 59798609 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006863 exon5 c.C591A p.C197X . . . LILRA1 11024 broad.mit.edu 36 19 59799015 59799015 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006863 exon6 c.G761A p.R254K . . . LILRB1 10859 broad.mit.edu 36 19 59840067 59840067 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006669 exon16 c.A1879G p.T627A . . . LILRB4 11006 broad.mit.edu 36 19 59866322 59866322 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006847 exon1 c.C25T p.L9F . . . LILRB4 11006 broad.mit.edu 36 19 59869509 59869509 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006847 exon8 c.G881A p.R294K . . . KIR2DL4 3805 broad.mit.edu 36 19 60008097 60008097 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002255 exon3 c.C114T p.S38S . . . FCAR 2204 broad.mit.edu 36 19 60088556 60088556 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002000 exon3 c.C168A p.Y56X . . . NLRP7 199713 broad.mit.edu 36 19 60141248 60141248 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139176 exon5 c.G2021T p.S674I . . . NLRP7 199713 broad.mit.edu 36 19 60141377 60141377 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127255 exon5 c.G1976A p.R659H . . . NLRP7 199713 broad.mit.edu 36 19 60142429 60142429 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139176 exon4 c.G1570A p.G524S . . . NLRP2 55655 broad.mit.edu 36 19 60184843 60184843 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174083 exon6 c.C375T p.V125V . . . NLRP2 55655 broad.mit.edu 36 19 60193252 60193252 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174083 exon10 c.C2348T p.A783V . . . PTPRH 5794 broad.mit.edu 36 19 60401983 60401983 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002842 exon8 c.C1530A p.V510V . . . RPL28 6158 broad.mit.edu 36 19 60591217 60591217 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136135 exon4 c.G313A p.D105N . . . NLRP9 338321 broad.mit.edu 36 19 60941448 60941448 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176820 exon1 c.G105A p.E35E . . . NLRP4 147945 broad.mit.edu 36 19 61061385 61061385 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon3 c.G814A p.E272K . . . NLRP4 147945 broad.mit.edu 36 19 61061550 61061550 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon3 c.C979A p.L327I . . . NLRP4 147945 broad.mit.edu 36 19 61061649 61061649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon3 c.G1078A p.D360N . . . NLRP4 147945 broad.mit.edu 36 19 61061935 61061935 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134444 exon3 c.T1364C p.I455T . . . NLRP13 126204 broad.mit.edu 36 19 61115332 61115332 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176810 exon5 c.G1663A p.E555K . . . NLRP13 126204 broad.mit.edu 36 19 61135292 61135292 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176810 exon1 c.G198T p.L66F . . . NLRP5 126206 broad.mit.edu 36 19 61235898 61235898 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153447 exon8 c.C2386T p.R796W . . . ZSCAN5B 342933 broad.mit.edu 36 19 61393089 61393089 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080456 exon4 c.T1407C p.C469C . . . ACSBG2 81616 broad.mit.edu 36 19 6141668 6141668 + Nonstop_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030924 exon14 c.A2001C p.X667C . . . ZNF583 147949 broad.mit.edu 36 19 61626737 61626737 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159860 exon5 c.G898T p.E300X . . . ZNF583 147949 broad.mit.edu 36 19 61626870 61626870 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159860 exon5 c.G1031T p.R344I . . . ZNF583 147949 broad.mit.edu 36 19 61627206 61627206 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159860 exon5 c.G1367T p.R456I . . . ZNF667 63934 broad.mit.edu 36 19 61645190 61645190 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022103 exon5 c.C986A p.P329H . . . ZFP28 140612 broad.mit.edu 36 19 61758296 61758296 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020828 exon8 c.G2330T p.R777I . . . ZNF470 388566 broad.mit.edu 36 19 61781531 61781531 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001668 exon6 c.G1922T p.R641I . . . ZNF835 90485 broad.mit.edu 36 19 61868396 61868396 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005850 exon2 c.G49T p.A17S . . . ZIM2 23619 broad.mit.edu 36 19 61977902 61977902 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146326 exon12 c.C1550A p.S517Y . . . PEG3 5178 broad.mit.edu 36 19 62018233 62018233 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146184 exon9 c.G3389A p.S1130N . . . PEG3 5178 broad.mit.edu 36 19 62018761 62018761 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146184 exon9 c.C2861A p.S954Y . . . PEG3 5178 broad.mit.edu 36 19 62024898 62024898 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146184 exon6 c.C602T p.A201V . . . USP29 57663 broad.mit.edu 36 19 62332098 62332098 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020903 exon4 c.C243A p.F81L . . . USP29 57663 broad.mit.edu 36 19 62332525 62332525 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020903 exon4 c.C670T p.L224F . . . USP29 57663 broad.mit.edu 36 19 62332761 62332761 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020903 exon4 c.G906A p.S302S . . . ZIM3 114026 broad.mit.edu 36 19 62338463 62338463 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052882 exon5 c.G1054A p.D352N . . . DUXA 503835 broad.mit.edu 36 19 62362443 62362443 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012729 exon3 c.C196T p.R66X . . . ZNF264 9422 broad.mit.edu 36 19 62414948 62414948 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003417 exon4 c.T671G p.I224S . . . ZNF264 9422 broad.mit.edu 36 19 62415860 62415860 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003417 exon4 c.G1583A p.R528Q . . . AURKC 6795 broad.mit.edu 36 19 62435243 62435243 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001015879 exon3 c.C78T p.I26I . . . ZNF543 125919 broad.mit.edu 36 19 62531604 62531604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213598 exon4 c.G962A p.R321Q . . . ZNF304 57343 broad.mit.edu 36 19 62559963 62559963 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020657 exon3 c.G914T p.R305I . . . ZNF548 147694 broad.mit.edu 36 19 62602299 62602299 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172773 exon4 c.G868T p.E290X . . . ZNF548 147694 broad.mit.edu 36 19 62602390 62602390 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172773 exon4 c.C959T p.P320L . . . ZNF548 147694 broad.mit.edu 36 19 62602471 62602471 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172773 exon4 c.G1040T p.R347I . . . ZNF548 147694 broad.mit.edu 36 19 62602739 62602739 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172773 exon4 c.C1308T p.S436S . . . ZNF17 7565 broad.mit.edu 36 19 62624477 62624477 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006959 exon3 c.G1805T p.R602I . . . ZNF749 388567 broad.mit.edu 36 19 62647202 62647202 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001023561 exon3 c.C874T p.L292F . . . ZNF749 388567 broad.mit.edu 36 19 62647498 62647498 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001023561 exon3 c.C1170A p.F390L . . . ZNF749 388567 broad.mit.edu 36 19 62647968 62647968 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001023561 exon3 c.A1640C p.K547T . . . ZNF749 388567 broad.mit.edu 36 19 62648366 62648366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001023561 exon3 c.C2038T p.R680C . . . ZNF772 400720 broad.mit.edu 36 19 62678946 62678946 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024596 exon3 c.C93T p.D31D . . . ZNF549 256051 broad.mit.edu 36 19 62741317 62741317 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199295 exon4 c.G1133A p.R378Q . . . ZNF416 55659 broad.mit.edu 36 19 62775877 62775877 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017879 exon4 c.A1207T p.I403F . . . ZIK1 284307 broad.mit.edu 36 19 62793242 62793242 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010879 exon4 c.C251A p.S84Y . . . ZIK1 284307 broad.mit.edu 36 19 62793605 62793605 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010879 exon4 c.G614A p.R205H . . . ZNF530 348327 broad.mit.edu 36 19 62809411 62809411 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020880 exon3 c.G706T p.E236X . . . ZNF211 10520 broad.mit.edu 36 19 62844934 62844934 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198855 exon3 c.G1268T p.R423I . . . ZNF211 10520 broad.mit.edu 36 19 62845341 62845341 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198855 exon3 c.C1675A p.H559N . . . ZSCAN4 201516 broad.mit.edu 36 19 62879364 62879364 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152677 exon3 c.A39C p.P13P . . . ZSCAN4 201516 broad.mit.edu 36 19 62879429 62879429 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152677 exon3 c.G104T p.R35I . . . ZNF551 90233 broad.mit.edu 36 19 62890603 62890603 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138347 exon3 c.G1100T p.R367I . . . ZNF551 90233 broad.mit.edu 36 19 62890832 62890832 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138347 exon3 c.C1329A p.F443L . . . ZNF154 7710 broad.mit.edu 36 19 62905549 62905549 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085384 exon3 c.T580C p.C194R . . . ZNF154 7710 broad.mit.edu 36 19 62908131 62908131 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085384 exon2 c.T62C p.V21A . . . ZNF776 284309 broad.mit.edu 36 19 62957328 62957328 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173632 exon3 c.C1018T p.R340X . . . ZNF586 54807 broad.mit.edu 36 19 62982136 62982136 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017652 exon3 c.G369T p.E123D . . . ZNF256 10172 broad.mit.edu 36 19 63145261 63145261 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005773 exon3 c.G727T p.E243X . . . ZNF606 80095 broad.mit.edu 36 19 63182357 63182357 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025027 exon7 c.A1503G p.G501G . . . ZSCAN1 284312 broad.mit.edu 36 19 63256709 63256709 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182572 exon6 c.C705A p.I235I . . . ZNF329 79673 broad.mit.edu 36 19 63331595 63331595 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024620 exon4 c.G1088T p.R363M . . . ZNF329 79673 broad.mit.edu 36 19 63331931 63331931 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024620 exon4 c.G752T p.R251I . . . ZNF132 7691 broad.mit.edu 36 19 63636886 63636886 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003433 exon3 c.C1737A p.F579L . . . ZNF324 25799 broad.mit.edu 36 19 63674404 63674404 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014347 exon4 c.G733A p.E245K . . . SLC27A5 10998 broad.mit.edu 36 19 63703852 63703852 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012254 exon5 c.G1216A p.A406T . . . TUBB4 10382 broad.mit.edu 36 19 6446415 6446415 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006087 exon4 c.G1095A p.A365A . . . C3 718 broad.mit.edu 36 19 6631227 6631227 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000064 exon36 c.C4398A p.Y1466X . . . C3 718 broad.mit.edu 36 19 6641655 6641655 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000064 exon27 c.C3474T p.C1158C . . . C3 718 broad.mit.edu 36 19 6660782 6660782 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000064 exon14 c.G1758T p.E586D . . . GPR108 56927 broad.mit.edu 36 19 6687634 6687634 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080452 exon2 c.G209A p.G70D . . . SH2D3A 10045 broad.mit.edu 36 19 6705673 6705673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005490 exon6 c.C1051T p.L351F . . . VAV1 7409 broad.mit.edu 36 19 6787519 6787519 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005428 exon20 c.G1854A p.R618R . . . VAV1 7409 broad.mit.edu 36 19 6803999 6803999 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005428 exon25 c.G2241T p.Q747H . . . INSR 3643 broad.mit.edu 36 19 7079909 7079909 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000208 exon15 c.C2899A p.L967I . . . INSR 3643 broad.mit.edu 36 19 7117391 7117391 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000208 exon8 c.C1635T p.F545F . . . PNPLA6 10908 broad.mit.edu 36 19 7512889 7512889 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166114 exon10 c.A1188G p.T396T . . . PNPLA6 10908 broad.mit.edu 36 19 7529982 7529982 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166114 exon28 c.G3644A p.R1215H . . . CLEC4M 10332 broad.mit.edu 36 19 7737627 7737627 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144904 exon5 c.C717T p.H239H . . . LRRC8E 80131 broad.mit.edu 36 19 7866608 7866608 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025061 exon2 c.C120A p.V40V . . . LRRC8E 80131 broad.mit.edu 36 19 7870496 7870496 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025061 exon3 c.C1089T p.F363F . . . TIMM44 10469 broad.mit.edu 36 19 7904827 7904827 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006351 exon6 c.G605A p.R202Q . . . ELAVL1 1994 broad.mit.edu 36 19 7938484 7938484 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001419 exon5 c.C621T p.F207F . . . FBN3 84467 broad.mit.edu 36 19 8042996 8042996 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032447 exon62 c.A8024G p.E2675G . . . FBN3 84467 broad.mit.edu 36 19 8058975 8058975 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032447 exon51 c.C6465A p.G2155G . . . ELANE 1991 broad.mit.edu 36 19 806986 806986 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001972 exon5 c.A626T p.N209I . . . FBN3 84467 broad.mit.edu 36 19 8081808 8081808 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032447 exon33 c.C4254T p.S1418S . . . LASS4 79603 broad.mit.edu 36 19 8227862 8227862 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024552 exon9 c.C642T p.F214F . . . PRAM1 84106 broad.mit.edu 36 19 8468678 8468678 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032152 exon4 c.G1546A p.D516N . . . MYO1F 4542 broad.mit.edu 36 19 8518995 8518995 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012335 exon12 c.C1194T p.F398F . . . ADAMTS10 81794 broad.mit.edu 36 19 8557510 8557510 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030957 exon20 c.C2335T p.R779X . . . MUC16 94025 broad.mit.edu 36 19 8855424 8855424 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon64 c.A41468G p.Q13823R . . . MUC16 94025 broad.mit.edu 36 19 8899096 8899096 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon8 c.C36180A p.S12060S . . . MUC16 94025 broad.mit.edu 36 19 8907860 8907860 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon5 c.A34771G p.T11591A . . . MUC16 94025 broad.mit.edu 36 19 8907998 8907998 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon5 c.C34633A p.L11545M . . . MUC16 94025 broad.mit.edu 36 19 8908191 8908191 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon5 c.G34440A p.E11480E . . . MUC16 94025 broad.mit.edu 36 19 8911067 8911067 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon5 c.G31564A p.E10522K . . . MUC16 94025 broad.mit.edu 36 19 8917181 8917181 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G31265A p.R10422Q . . . MUC16 94025 broad.mit.edu 36 19 8918842 8918842 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G29604A p.P9868P . . . MUC16 94025 broad.mit.edu 36 19 8919483 8919483 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.A28963G p.T9655A . . . MUC16 94025 broad.mit.edu 36 19 8920422 8920422 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.T28024C p.S9342P . . . MUC16 94025 broad.mit.edu 36 19 8920881 8920881 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.T27565C p.L9189L . . . MUC16 94025 broad.mit.edu 36 19 8921517 8921517 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G26929T p.D8977Y . . . MUC16 94025 broad.mit.edu 36 19 8921948 8921948 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G26498A p.S8833N . . . MUC16 94025 broad.mit.edu 36 19 8922323 8922323 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.C26123A p.S8708Y . . . MUC16 94025 broad.mit.edu 36 19 8922629 8922629 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.G25817A p.R8606H . . . MUC16 94025 broad.mit.edu 36 19 8923923 8923923 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.T24523C p.S8175P . . . MUC16 94025 broad.mit.edu 36 19 8928487 8928487 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.C19959A p.F6653L . . . MUC16 94025 broad.mit.edu 36 19 8929997 8929997 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.C18449A p.S6150Y . . . MUC16 94025 broad.mit.edu 36 19 8933831 8933831 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.T14615A p.I4872N . . . MUC16 94025 broad.mit.edu 36 19 8938467 8938467 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.A9979G p.T3327A . . . MUC16 94025 broad.mit.edu 36 19 8938775 8938775 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon3 c.T9671C p.V3224A . . . MUC16 94025 broad.mit.edu 36 19 8944660 8944660 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.G8155T p.E2719X . . . MUC16 94025 broad.mit.edu 36 19 8948546 8948546 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.C4269A p.T1423T . . . MUC16 94025 broad.mit.edu 36 19 8949784 8949784 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024690 exon1 c.G3031A p.A1011T . . . OR7G2 390882 broad.mit.edu 36 19 9074100 9074100 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005193 exon1 c.G883A p.A295T . . . ZNF699 374879 broad.mit.edu 36 19 9274107 9274107 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198535 exon2 c.G122T p.R41I . . . ZNF559 84527 broad.mit.edu 36 19 9314161 9314161 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032497 exon6 c.G1034A p.R345Q . . . ZNF560 147741 broad.mit.edu 36 19 9438789 9438789 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152476 exon10 c.C1834T p.R612C . . . ZNF560 147741 broad.mit.edu 36 19 9439758 9439758 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152476 exon10 c.G865T p.D289Y . . . ZNF560 147741 broad.mit.edu 36 19 9445928 9445928 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152476 exon4 c.G104T p.R35I . . . ZNF121 7675 broad.mit.edu 36 19 9537710 9537710 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008727 exon4 c.G1079T p.R360I . . . ZNF846 162993 broad.mit.edu 36 19 9729897 9729897 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077624 exon6 c.G856T p.E286X . . . OLFM2 93145 broad.mit.edu 36 19 9826191 9826191 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058164 exon6 c.G1036A p.V346M . . . ICAM3 3385 broad.mit.edu 36 19 10310350 10310350 + Intron SNP C T T rs2304239 byFrequency;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CNN1 1264 broad.mit.edu 36 19 11521622 11521622 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF833P 401898 broad.mit.edu 36 19 11657230 11657230 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZNF878 729747 broad.mit.edu 36 19 12018584 12018584 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EMR3 84658 broad.mit.edu 36 19 14626792 14626792 + Splice_Site SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NOTCH3 4854 broad.mit.edu 36 19 15156104 15156104 + Splice_Site SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CYP4F12 66002 broad.mit.edu 36 19 15645549 15645549 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NWD1 284434 broad.mit.edu 36 19 16763440 16763440 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CPAMD8 27151 broad.mit.edu 36 19 16992137 16992137 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HAUS8 93323 broad.mit.edu 36 19 17040905 17040905 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYO9B 4650 broad.mit.edu 36 19 17169594 17169594 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM161A 54929 broad.mit.edu 36 19 19104151 19104151 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF431 170959 broad.mit.edu 36 19 21142210 21142210 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DOT1L 84444 broad.mit.edu 36 19 2136843 2136843 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF536 9745 broad.mit.edu 36 19 35739897 35739897 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIRREL2 84063 broad.mit.edu 36 19 41040075 41040075 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CATSPERG 57828 broad.mit.edu 36 19 43547540 43547540 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HNRNPL 3191 broad.mit.edu 36 19 44020067 44020067 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MIA 8190 broad.mit.edu 36 19 45973425 45973425 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF137P 7696 broad.mit.edu 36 19 57792213 57792213 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 19 58889551 58889551 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 19 58916186 58916186 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PRKCG 5582 broad.mit.edu 36 19 59084697 59084697 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PRKCG 5582 broad.mit.edu 36 19 59095295 59095295 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KIR3DX1 90011 broad.mit.edu 36 19 59737018 59737018 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NLRP11 204801 broad.mit.edu 36 19 60989055 60989055 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF773 374928 broad.mit.edu 36 19 62716240 62716240 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C3 718 broad.mit.edu 36 19 6637914 6637914 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CD209 30835 broad.mit.edu 36 19 7718184 7718184 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF559 84527 broad.mit.edu 36 19 9313360 9313360 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MIA3 375056 broad.mit.edu 36 1 220870099 220870100 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198551 exon4 c.2914_2915insA p.E972fs . . . KIAA0754 643314 broad.mit.edu 36 1 39651623 39651624 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015038 exon1 c.3099_3100insC p.V1033fs . . . MIER1 57708 broad.mit.edu 36 1 67214913 67214914 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077700 exon12 c.1149_1150insA p.W383fs . . . OR2L3 391192 broad.mit.edu 36 1 246291000 246291000 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C - C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004687 exon1 c.394delC p.P132fs . . . AGL 178 broad.mit.edu 36 1 100119523 100119523 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000645 exon14 c.G2038A p.G680S . . . CCDC76 54482 broad.mit.edu 36 1 100379012 100379012 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019083 exon7 c.A518G p.N173S . . . UBE4B 10277 broad.mit.edu 36 1 10085734 10085734 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105562 exon5 c.G577T p.E193X . . . COL11A1 1301 broad.mit.edu 36 1 103116202 103116202 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080630 exon65 c.G5034A p.K1678K . . . COL11A1 1301 broad.mit.edu 36 1 103119857 103119857 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080630 exon63 c.T4676G p.F1559C . . . COL11A1 1301 broad.mit.edu 36 1 103256993 103256993 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080630 exon8 c.T971G p.V324G . . . COL11A1 1301 broad.mit.edu 36 1 103263675 103263675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001854 exon7 c.G980A p.G327E . . . KIF1B 23095 broad.mit.edu 36 1 10345937 10345937 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015074 exon39 c.C4176A p.V1392V . . . PGD 5226 broad.mit.edu 36 1 10395810 10395810 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002631 exon8 c.G759T p.K253N . . . AMY2A 279 broad.mit.edu 36 1 103964697 103964697 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000699 exon5 c.T746G p.V249G . . . PRMT6 55170 broad.mit.edu 36 1 107401403 107401403 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018137 exon1 c.C543T p.G181G . . . VAV3 10451 broad.mit.edu 36 1 107947271 107947271 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079874 exon6 c.G373A p.E125K . . . VAV3 10451 broad.mit.edu 36 1 107961736 107961736 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079874 exon4 c.T276G p.S92R . . . VAV3 10451 broad.mit.edu 36 1 108219159 108219159 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006113 exon2 c.C208A p.L70I . . . CLCC1 23155 broad.mit.edu 36 1 109284238 109284238 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001048210 exon8 c.C846A p.Y282X . . . KIAA1324 57535 broad.mit.edu 36 1 109517877 109517877 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020775 exon7 c.T847C p.Y283H . . . SARS 6301 broad.mit.edu 36 1 109580139 109580139 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006513 exon8 c.C987T p.Y329Y . . . CELSR2 1952 broad.mit.edu 36 1 109613935 109613935 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001408 exon22 c.C7077T p.F2359F . . . PSMA5 5686 broad.mit.edu 36 1 109754134 109754134 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199774 exon8 c.A413C p.K138T . . . SYPL2 284612 broad.mit.edu 36 1 109823540 109823540 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040709 exon6 c.C666A p.N222K . . . ATXN7L2 127002 broad.mit.edu 36 1 109831843 109831843 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153340 exon5 c.C594T p.I198I . . . ATXN7L2 127002 broad.mit.edu 36 1 109833068 109833068 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153340 exon7 c.C860T p.A287V . . . GSTM2 2946 broad.mit.edu 36 1 110015460 110015460 + Missense_Mutation SNP C G G rs1056795 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000848 exon6 c.C389G p.A130G . . . EPS8L3 79574 broad.mit.edu 36 1 110094894 110094894 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139053 exon18 c.C1684T p.R562C . . . FAM40A 85369 broad.mit.edu 36 1 110390880 110390880 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033088 exon13 c.G1472A p.R491H . . . SLC6A17 388662 broad.mit.edu 36 1 110536188 110536188 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010898 exon7 c.C936A p.G312G . . . KCNC4 3749 broad.mit.edu 36 1 110567378 110567378 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004978 exon2 c.C948A p.I316I . . . RBM15 64783 broad.mit.edu 36 1 110683939 110683939 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022768 exon1 c.G389A p.S130N . . . KCNA10 3744 broad.mit.edu 36 1 110862435 110862435 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005549 exon1 c.C498A p.I166I . . . KCNA10 3744 broad.mit.edu 36 1 110862857 110862857 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005549 exon1 c.C76T p.P26S . . . KCNA3 3738 broad.mit.edu 36 1 111017359 111017359 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002232 exon1 c.C1596T p.I532I . . . KCNA3 3738 broad.mit.edu 36 1 111018031 111018031 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002232 exon1 c.C924T p.F308F . . . CD53 963 broad.mit.edu 36 1 111236600 111236600 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040033 exon4 c.C174T p.I58I . . . CHI3L2 1117 broad.mit.edu 36 1 111575005 111575005 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004000 exon3 c.C189T p.F63F . . . CHI3L2 1117 broad.mit.edu 36 1 111579072 111579072 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004000 exon5 c.C350A p.S117Y . . . CHI3L2 1117 broad.mit.edu 36 1 111585498 111585498 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004000 exon9 c.G945T p.K315N . . . CHIA 27159 broad.mit.edu 36 1 111656397 111656397 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201653 exon4 c.C118T p.R40C . . . CHIA 27159 broad.mit.edu 36 1 111664508 111664508 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201653 exon12 c.A1328G p.N443S . . . C1orf88 128344 broad.mit.edu 36 1 111691055 111691055 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181643 exon2 c.A20G p.D7G . . . DDX20 11218 broad.mit.edu 36 1 112106845 112106845 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007204 exon9 c.G1128A p.E376E . . . DDX20 11218 broad.mit.edu 36 1 112110196 112110196 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007204 exon11 c.G1627A p.E543K . . . KCND3 3752 broad.mit.edu 36 1 112124893 112124893 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004980 exon4 c.C1313T p.S438L . . . MTOR 2475 broad.mit.edu 36 1 11216053 11216053 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004958 exon15 c.G2410T p.E804X . . . KCND3 3752 broad.mit.edu 36 1 112326629 112326629 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004980 exon2 c.G243T p.E81D . . . UBIAD1 29914 broad.mit.edu 36 1 11256464 11256464 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013319 exon1 c.G289A p.A97T . . . WNT2B 7482 broad.mit.edu 36 1 112859171 112859171 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004185 exon3 c.G278A p.R93H . . . ST7L 54879 broad.mit.edu 36 1 112900052 112900052 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138728 exon12 c.G1357T p.E453X . . . RHOC 389 broad.mit.edu 36 1 113046758 113046758 + Missense_Mutation SNP C T T rs11538959 byCluster;byFrequency;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175744 exon5 c.G358A p.D120N . . . MAGI3 260425 broad.mit.edu 36 1 114028122 114028122 + 3'UTR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142782 exon21 c.T4409G p.V1470G . . . PHTF1 10745 broad.mit.edu 36 1 114050108 114050108 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006608 exon12 c.A1598C p.N533T . . . PHTF1 10745 broad.mit.edu 36 1 114101861 114101861 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006608 exon2 c.G85A p.E29K . . . RSBN1 54665 broad.mit.edu 36 1 114141716 114141716 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018364 exon2 c.G1169T p.R390I . . . PTPN22 26191 broad.mit.edu 36 1 114182151 114182151 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012411 exon11 c.G1229T p.S410I . . . AP4B1 10717 broad.mit.edu 36 1 114240516 114240516 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006594 exon9 c.C1397T p.S466L . . . HIPK1 204851 broad.mit.edu 36 1 114307540 114307540 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198269 exon9 c.T990C p.C330C . . . HIPK1 204851 broad.mit.edu 36 1 114312748 114312748 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198269 exon12 c.G1604A p.R535Q . . . TRIM33 51592 broad.mit.edu 36 1 114749730 114749730 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015906 exon15 c.C2593T p.R865X . . . DENND2C 163259 broad.mit.edu 36 1 114967235 114967235 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198459 exon4 c.A952G p.K318E . . . CSDE1 7812 broad.mit.edu 36 1 115074547 115074547 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007158 exon11 c.G1118T p.R373I . . . CSDE1 7812 broad.mit.edu 36 1 115076753 115076753 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007158 exon9 c.G952T p.E318X . . . SYCP1 6847 broad.mit.edu 36 1 115229744 115229744 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003176 exon13 c.G976T p.D326Y . . . SYCP1 6847 broad.mit.edu 36 1 115267618 115267618 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003176 exon21 c.G1744T p.E582X . . . SYCP1 6847 broad.mit.edu 36 1 115288551 115288551 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003176 exon24 c.G1995T p.Q665H . . . CD58 965 broad.mit.edu 36 1 116888721 116888721 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001779 exon2 c.A99G p.I33M . . . CD2 914 broad.mit.edu 36 1 117098781 117098781 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001767 exon2 c.G67T p.V23F . . . CD101 9398 broad.mit.edu 36 1 117357556 117357556 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004258 exon4 c.G847T p.D283Y . . . CD101 9398 broad.mit.edu 36 1 117362469 117362469 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004258 exon6 c.G1781A p.R594Q . . . TTF2 8458 broad.mit.edu 36 1 117419218 117419218 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003594 exon5 c.C489T p.F163F . . . TTF2 8458 broad.mit.edu 36 1 117419345 117419345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003594 exon5 c.G616A p.A206T . . . VTCN1 79679 broad.mit.edu 36 1 117500794 117500794 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024626 exon3 c.G370T p.D124Y . . . MAN1A2 10905 broad.mit.edu 36 1 117786463 117786463 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006699 exon6 c.T943G p.L315V . . . GDAP2 54834 broad.mit.edu 36 1 118256139 118256139 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017686 exon5 c.C559T p.R187C . . . WDR3 10885 broad.mit.edu 36 1 118301281 118301281 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006784 exon25 c.G2521A p.E841K . . . SPAG17 200162 broad.mit.edu 36 1 118352271 118352271 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon31 c.C4506T p.I1502I . . . SPAG17 200162 broad.mit.edu 36 1 118398214 118398214 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon20 c.G2748T p.E916D . . . SPAG17 200162 broad.mit.edu 36 1 118437386 118437386 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206996 exon8 c.G1089T p.Q363H . . . ZNF697 90874 broad.mit.edu 36 1 119970208 119970208 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080470 exon2 c.G39T p.Q13H . . . NBPF7 343505 broad.mit.edu 36 1 120185663 120185663 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001047980 exon3 c.A422C p.H141P . . . ADAM30 11085 broad.mit.edu 36 1 120239853 120239853 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021794 exon1 c.C630A p.L210L . . . ADAM30 11085 broad.mit.edu 36 1 120240216 120240216 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021794 exon1 c.C267T p.R89R . . . NOTCH2 4853 broad.mit.edu 36 1 120263716 120263716 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024408 exon31 c.C5523T p.S1841S . . . NOTCH2 4853 broad.mit.edu 36 1 120284706 120284706 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024408 exon19 c.T3178G p.C1060G . . . VPS13D 55187 broad.mit.edu 36 1 12260250 12260250 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon19 c.G4018A p.V1340I . . . VPS13D 55187 broad.mit.edu 36 1 12338600 12338600 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon47 c.A9662C p.Q3221P . . . VPS13D 55187 broad.mit.edu 36 1 12356494 12356494 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018156 exon54 c.A10836G p.K3612K . . . DHRS3 9249 broad.mit.edu 36 1 12562016 12562016 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004753 exon3 c.C351A p.I117I . . . HNRNPCL1 343069 broad.mit.edu 36 1 12830700 12830700 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146181 exon1 c.T30C p.D10D . . . PRAMEF2 65122 broad.mit.edu 36 1 12841493 12841493 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023014 exon2 c.G42A p.G14G . . . PRAMEF10 343071 broad.mit.edu 36 1 12877218 12877218 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039361 exon3 c.C652T p.L218F . . . PRAMEF22 653606 broad.mit.edu 36 1 12959225 12959225 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100631 exon2 c.G710A p.R237H . . . PRAMEF20 645425 broad.mit.edu 36 1 13615637 13615637 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099852 exon2 c.C239T p.A80V . . . PDE4DIP 9659 broad.mit.edu 36 1 143642004 143642004 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002811 exon1 c.G1062T p.E354D . . . PDE4DIP 9659 broad.mit.edu 36 1 143642398 143642398 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002811 exon1 c.G668T p.S223I . . . PDE4DIP 9659 broad.mit.edu 36 1 143642857 143642857 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002811 exon1 c.G209T p.R70L . . . PDE4DIP 9659 broad.mit.edu 36 1 143643057 143643057 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002811 exon1 c.G9A p.E3E . . . SEC22B 9554 broad.mit.edu 36 1 143823747 143823747 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004892 exon4 c.A364G p.T122A . . . SEC22B 9554 broad.mit.edu 36 1 143827149 143827149 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004892 exon5 c.C551T p.A184V . . . NOTCH2NL 388677 broad.mit.edu 36 1 143984791 143984791 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203458 exon3 c.C288T p.V96V . . . TXNIP 10628 broad.mit.edu 36 1 144150185 144150185 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006472 exon1 c.C26A p.S9Y . . . ANKRD34A 284615 broad.mit.edu 36 1 144186058 144186058 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039888 exon4 c.C1373T p.A458V . . . PEX11B 8799 broad.mit.edu 36 1 144234220 144234220 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184795 exon4 c.T682C p.S228P . . . ITGA10 8515 broad.mit.edu 36 1 144249620 144249620 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003637 exon23 c.G2790T p.Q930H . . . ANKRD35 148741 broad.mit.edu 36 1 144267165 144267165 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144698 exon2 c.G156A p.S52S . . . ANKRD35 148741 broad.mit.edu 36 1 144273213 144273213 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144698 exon10 c.G1544T p.R515I . . . ANKRD35 148741 broad.mit.edu 36 1 144273531 144273531 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144698 exon10 c.G1862T p.R621I . . . CD160 11126 broad.mit.edu 36 1 144415607 144415607 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007053 exon4 c.T167G p.F56C . . . PRKAB2 5565 broad.mit.edu 36 1 145100644 145100644 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005399 exon6 c.C671A p.S224Y . . . BCL9 607 broad.mit.edu 36 1 145557278 145557278 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004326 exon8 c.G693A p.P231P . . . BCL9 607 broad.mit.edu 36 1 145557755 145557755 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004326 exon8 c.G1170T p.Q390H . . . BCL9 607 broad.mit.edu 36 1 145557867 145557867 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004326 exon8 c.G1282T p.A428S . . . NBPF15 284565 broad.mit.edu 36 1 146857888 146857888 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001102663 exon12 c.T1329G p.C443W . . . SV2A 9900 broad.mit.edu 36 1 148146344 148146344 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014849 exon9 c.G1418A p.R473H . . . MTMR11 10903 broad.mit.edu 36 1 148172430 148172430 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181873 exon7 c.G497A p.R166Q . . . OTUD7B 56957 broad.mit.edu 36 1 148209780 148209780 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020205 exon3 c.G109A p.A37T . . . PLEKHO1 51177 broad.mit.edu 36 1 148389830 148389830 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016274 exon2 c.T135C p.Y45Y . . . CA14 23632 broad.mit.edu 36 1 148500628 148500628 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012113 exon3 c.G223A p.E75K . . . TARS2 80222 broad.mit.edu 36 1 148743437 148743437 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025150 exon14 c.T1620G p.I540M . . . HORMAD1 84072 broad.mit.edu 36 1 148956319 148956319 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199829 exon3 c.C97T p.L33F . . . ZNF687 57592 broad.mit.edu 36 1 149529588 149529588 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020832 exon8 c.T3134C p.V1045A . . . PI4KB 5298 broad.mit.edu 36 1 149554762 149554762 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198773 exon4 c.C820T p.R274C . . . CGN 57530 broad.mit.edu 36 1 149773185 149773185 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020770 exon15 c.G2853T p.E951D . . . TCHHL1 126637 broad.mit.edu 36 1 150324238 150324238 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008536 exon3 c.C2544A p.V848V . . . TCHH 7062 broad.mit.edu 36 1 150346952 150346952 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007113 exon2 c.C5365T p.R1789C . . . FLG 2312 broad.mit.edu 36 1 150548149 150548149 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002016 exon3 c.C5837T p.A1946V . . . KPRP 448834 broad.mit.edu 36 1 151000096 151000096 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025231 exon2 c.C1408A p.P470T . . . SPRR2E 6704 broad.mit.edu 36 1 151332723 151332723 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024209 exon2 c.G129A p.Q43Q . . . PGLYRP4 57115 broad.mit.edu 36 1 151579494 151579494 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020393 exon7 c.G811A p.D271N . . . S100A7L2 645922 broad.mit.edu 36 1 151677390 151677390 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045479 exon2 c.G73T p.V25F . . . S100A2 6273 broad.mit.edu 36 1 151800622 151800622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005978 exon3 c.G211A p.D71N . . . DENND4B 9909 broad.mit.edu 36 1 152180357 152180357 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014856 exon8 c.G1155C p.Q385H . . . DENND4B 9909 broad.mit.edu 36 1 152181186 152181186 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014856 exon6 c.G838A p.E280K . . . NUP210L 91181 broad.mit.edu 36 1 152269028 152269028 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon28 c.T3823G p.L1275V . . . NUP210L 91181 broad.mit.edu 36 1 152296004 152296004 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon23 c.C3151T p.R1051X . . . NUP210L 91181 broad.mit.edu 36 1 152357785 152357785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon11 c.C1450T p.R484C . . . NUP210L 91181 broad.mit.edu 36 1 152366452 152366452 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207308 exon9 c.G1144T p.D382Y . . . C1orf189 388701 broad.mit.edu 36 1 152439650 152439650 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010979 exon3 c.C113A p.A38E . . . AQP10 89872 broad.mit.edu 36 1 152562390 152562390 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080429 exon4 c.G420T p.K140N . . . AQP10 89872 broad.mit.edu 36 1 152562728 152562728 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080429 exon5 c.A529G p.I177V . . . ATP8B2 57198 broad.mit.edu 36 1 152569513 152569513 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005855 exon3 c.C49T p.R17W . . . ATP8B2 57198 broad.mit.edu 36 1 152576741 152576741 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005855 exon12 c.G1131T p.E377D . . . SHE 126669 broad.mit.edu 36 1 152723362 152723362 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010846 exon6 c.G1375A p.A459T . . . UBE2Q1 55585 broad.mit.edu 36 1 152793845 152793845 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017582 exon4 c.A578C p.E193A . . . PBXIP1 57326 broad.mit.edu 36 1 153190403 153190403 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020524 exon5 c.G338A p.G113D . . . DCST2 127579 broad.mit.edu 36 1 153265490 153265490 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144622 exon10 c.G1523A p.G508D . . . ADAM15 8751 broad.mit.edu 36 1 153293508 153293508 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207196 exon6 c.C514A p.L172I . . . ASH1L 55870 broad.mit.edu 36 1 153715368 153715368 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018489 exon3 c.G3917A p.R1306Q . . . ASH1L 55870 broad.mit.edu 36 1 153717508 153717508 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018489 exon3 c.G1777A p.E593K . . . GON4L 54856 broad.mit.edu 36 1 153996906 153996906 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037533 exon24 c.G5062T p.D1688Y . . . GON4L 54856 broad.mit.edu 36 1 154002166 154002166 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032292 exon21 c.C3722T p.A1241V . . . PMF1 11243 broad.mit.edu 36 1 154472746 154472746 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199654 exon4 c.G418T p.A140S . . . SMG5 23381 broad.mit.edu 36 1 154487873 154487873 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015327 exon20 c.G2773T p.E925X . . . C1orf61 10485 broad.mit.edu 36 1 154643572 154643572 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006365 exon6 c.T347G p.F116C . . . IQGAP3 128239 broad.mit.edu 36 1 154764449 154764449 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178229 exon37 c.G4701A p.T1567T . . . IQGAP3 128239 broad.mit.edu 36 1 154773691 154773691 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178229 exon27 c.G3328A p.E1110K . . . NES 10763 broad.mit.edu 36 1 154906016 154906016 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006617 exon4 c.G4588A p.A1530T . . . NES 10763 broad.mit.edu 36 1 154908112 154908112 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006617 exon4 c.C2492A p.S831Y . . . NTRK1 4914 broad.mit.edu 36 1 155112512 155112512 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012331 exon12 c.G1500A p.K500K . . . ARHGEF11 9826 broad.mit.edu 36 1 155173311 155173311 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014784 exon39 c.C4431A p.G1477G . . . FCRL5 83416 broad.mit.edu 36 1 155757556 155757556 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031281 exon11 c.C2390T p.S797L . . . FCRL3 115352 broad.mit.edu 36 1 155933567 155933567 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052939 exon6 c.G831T p.Q277H . . . CD5L 922 broad.mit.edu 36 1 156069829 156069829 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005894 exon5 c.C816T p.N272N . . . CD5L 922 broad.mit.edu 36 1 156072270 156072270 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005894 exon3 c.G355T p.D119Y . . . KIRREL 55243 broad.mit.edu 36 1 156324196 156324196 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018240 exon6 c.A689G p.E230G . . . KIRREL 55243 broad.mit.edu 36 1 156324483 156324483 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018240 exon7 c.T831G p.D277E . . . CD1D 912 broad.mit.edu 36 1 156419461 156419461 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001766 exon5 c.G777T p.E259D . . . OR6Y1 391112 broad.mit.edu 36 1 156783882 156783882 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005189 exon1 c.C638T p.A213V . . . SPTA1 6708 broad.mit.edu 36 1 156850682 156850682 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon49 c.T6827G p.F2276C . . . SPTA1 6708 broad.mit.edu 36 1 156851801 156851801 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon48 c.T6617C p.I2206T . . . SPTA1 6708 broad.mit.edu 36 1 156889048 156889048 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon23 c.C3208A p.R1070R . . . SPTA1 6708 broad.mit.edu 36 1 156899179 156899179 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon17 c.G2401T p.D801Y . . . SPTA1 6708 broad.mit.edu 36 1 156905931 156905931 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon14 c.G1724A p.R575H . . . SPTA1 6708 broad.mit.edu 36 1 156911024 156911024 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003126 exon9 c.T1178G p.I393S . . . OR6K3 391114 broad.mit.edu 36 1 156954360 156954360 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005327 exon1 c.A170C p.N57T . . . OR6K3 391114 broad.mit.edu 36 1 156954446 156954446 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005327 exon1 c.C84A p.F28L . . . OR6K6 128371 broad.mit.edu 36 1 156991986 156991986 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005184 exon1 c.C757A p.L253M . . . OR6N2 81442 broad.mit.edu 36 1 157013414 157013414 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005278 exon1 c.C636A p.F212L . . . MNDA 4332 broad.mit.edu 36 1 157082186 157082186 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002432 exon5 c.C756T p.F252F . . . PYHIN1 149628 broad.mit.edu 36 1 157173418 157173418 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198930 exon2 c.G94A p.D32N . . . PYHIN1 149628 broad.mit.edu 36 1 157180357 157180357 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198930 exon6 c.T1129C p.S377P . . . PYHIN1 149628 broad.mit.edu 36 1 157210107 157210107 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152501 exon8 c.G1406T p.R469I . . . AIM2 9447 broad.mit.edu 36 1 157302590 157302590 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004833 exon4 c.G550T p.E184X . . . DNAJC16 23341 broad.mit.edu 36 1 15735560 15735560 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015291 exon4 c.C238A p.L80I . . . CADM3 57863 broad.mit.edu 36 1 157429036 157429036 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021189 exon4 c.G376A p.E126K . . . AGMAT 79814 broad.mit.edu 36 1 15776800 15776800 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024758 exon5 c.G867A p.G289G . . . APCS 325 broad.mit.edu 36 1 157824862 157824862 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001639 exon2 c.C412T p.L138L . . . CCDC19 25790 broad.mit.edu 36 1 158113144 158113144 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012337 exon10 c.G1178A p.R393H . . . CCDC19 25790 broad.mit.edu 36 1 158124840 158124840 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012337 exon4 c.G343A p.A115T . . . KCNJ10 3766 broad.mit.edu 36 1 158278841 158278841 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002241 exon2 c.C106T p.R36C . . . ATP1A2 477 broad.mit.edu 36 1 158365104 158365104 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000702 exon9 c.G1056T p.K352N . . . ATP1A4 480 broad.mit.edu 36 1 158395918 158395918 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144699 exon6 c.C756A p.F252L . . . ATP1A4 480 broad.mit.edu 36 1 158411076 158411076 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144699 exon15 c.C2226T p.I742I . . . CASQ1 844 broad.mit.edu 36 1 158432319 158432319 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001231 exon6 c.G660T p.K220N . . . CD84 8832 broad.mit.edu 36 1 158789895 158789895 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184879 exon4 c.C657T p.F219F . . . SLAMF7 57823 broad.mit.edu 36 1 158986274 158986274 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021181 exon3 c.G416A p.S139N . . . CD244 51744 broad.mit.edu 36 1 159078126 159078126 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166664 exon2 c.G251A p.S84N . . . ITLN2 142683 broad.mit.edu 36 1 159187022 159187022 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080878 exon5 c.G545A p.R182H . . . USF1 7391 broad.mit.edu 36 1 159277075 159277075 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007122 exon9 c.G629A p.R210H . . . USF1 7391 broad.mit.edu 36 1 159278128 159278128 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007122 exon6 c.G409T p.A137S . . . ARHGAP30 257106 broad.mit.edu 36 1 159289748 159289748 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181720 exon6 c.G588T p.E196D . . . NIT1 4817 broad.mit.edu 36 1 159356992 159356992 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005600 exon7 c.G797T p.R266I . . . USP21 27005 broad.mit.edu 36 1 159397589 159397589 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012475 exon2 c.T535C p.S179P . . . B4GALT3 8703 broad.mit.edu 36 1 159408298 159408298 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199874 exon8 c.C1114T p.R372C . . . ADAMTS4 9507 broad.mit.edu 36 1 159434576 159434576 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005099 exon1 c.C466T p.R156W . . . C1orf192 257177 broad.mit.edu 36 1 159601513 159601513 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013625 exon5 c.A400G p.T134A . . . FCGR3A 2214 broad.mit.edu 36 1 159779537 159779537 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127595 exon6 c.T654G p.L218L . . . FCGR2C 9103 broad.mit.edu 36 1 159826166 159826166 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201563 exon3 c.C324T p.S108S . . . FCGR2B 2213 broad.mit.edu 36 1 159908035 159908035 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190828 exon2 c.C342T p.S114S . . . OLFML2B 25903 broad.mit.edu 36 1 160236561 160236561 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015441 exon5 c.G915T p.K305N . . . NOS1AP 9722 broad.mit.edu 36 1 160591711 160591711 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164757 exon7 c.G691T p.G231C . . . NOS1AP 9722 broad.mit.edu 36 1 160601979 160601979 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164757 exon9 c.C1086T p.N362N . . . DDR2 4921 broad.mit.edu 36 1 161006855 161006855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014796 exon13 c.G1433A p.R478H . . . DDR2 4921 broad.mit.edu 36 1 161008558 161008558 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014796 exon14 c.C1625T p.A542V . . . SPEN 23013 broad.mit.edu 36 1 16130545 16130545 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015001 exon11 c.G5223A p.S1741S . . . RGS4 5999 broad.mit.edu 36 1 161309906 161309906 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113380 exon4 c.A194G p.E65G . . . NUF2 83540 broad.mit.edu 36 1 161563956 161563956 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031423 exon3 c.C178T p.R60X . . . NUF2 83540 broad.mit.edu 36 1 161584247 161584247 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031423 exon12 c.C1019T p.S340L . . . LMX1A 4009 broad.mit.edu 36 1 163439866 163439866 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177398 exon9 c.G1024A p.D342N . . . RXRG 6258 broad.mit.edu 36 1 163637145 163637145 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006917 exon10 c.G1371T p.E457D . . . RXRG 6258 broad.mit.edu 36 1 163645436 163645436 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006917 exon7 c.C1029T p.V343V . . . ALDH9A1 223 broad.mit.edu 36 1 163903274 163903274 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000696 exon9 c.G1245T p.E415D . . . DUSP27 92235 broad.mit.edu 36 1 165362978 165362978 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080426 exon5 c.C1986A p.F662L . . . ADCY10 55811 broad.mit.edu 36 1 166045557 166045557 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167749 exon30 c.C4356T p.T1452T . . . ADCY10 55811 broad.mit.edu 36 1 166045650 166045650 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167749 exon30 c.G4263A p.T1421T . . . ADCY10 55811 broad.mit.edu 36 1 166065230 166065230 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167749 exon23 c.C3190T p.R1064C . . . ADCY10 55811 broad.mit.edu 36 1 166068908 166068908 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167749 exon22 c.C3075T p.V1025V . . . ADCY10 55811 broad.mit.edu 36 1 166082121 166082121 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167749 exon17 c.C1983A p.I661I . . . GPR161 23432 broad.mit.edu 36 1 166340444 166340444 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153832 exon4 c.G269A p.R90H . . . TBX19 9095 broad.mit.edu 36 1 166527163 166527163 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005149 exon2 c.G345T p.E115D . . . TBX19 9095 broad.mit.edu 36 1 166544734 166544734 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005149 exon7 c.G1047A p.G349G . . . ATP1B1 481 broad.mit.edu 36 1 167363110 167363110 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001677 exon4 c.G407A p.R136Q . . . NME7 29922 broad.mit.edu 36 1 167534428 167534428 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_197972 exon6 c.C530A p.S177Y . . . BLZF1 8548 broad.mit.edu 36 1 167616446 167616446 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003666 exon5 c.C772T p.R258C . . . F5 2153 broad.mit.edu 36 1 167788547 167788547 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000130 exon8 c.C1168A p.H390N . . . F5 2153 broad.mit.edu 36 1 167822225 167822225 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000130 exon1 c.C24T p.L8L . . . SELP 6403 broad.mit.edu 36 1 167829482 167829482 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003005 exon14 c.C2392T p.R798C . . . SELP 6403 broad.mit.edu 36 1 167853218 167853218 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003005 exon3 c.C153A p.Y51X . . . C1orf156 92342 broad.mit.edu 36 1 168028797 168028797 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033418 exon2 c.G664A p.V222M . . . SCYL3 57147 broad.mit.edu 36 1 168098390 168098390 + Silent SNP G T T rs61734335 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181093 exon10 c.C1128A p.V376V . . . PRRX1 5396 broad.mit.edu 36 1 168962036 168962036 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006902 exon3 c.C469A p.L157I . . . C1orf129 80133 broad.mit.edu 36 1 169197699 169197699 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025063 exon6 c.G333A p.T111T . . . C1orf129 80133 broad.mit.edu 36 1 169234007 169234007 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025063 exon15 c.G1564T p.D522Y . . . FMO2 2327 broad.mit.edu 36 1 169429258 169429258 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001460 exon3 c.T293G p.F98C . . . FMO2 2327 broad.mit.edu 36 1 169432527 169432527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001460 exon4 c.G437A p.C146Y . . . BAT2L2 23215 broad.mit.edu 36 1 169777514 169777514 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015172 exon16 c.C4279T p.R1427X . . . BAT2L2 23215 broad.mit.edu 36 1 169777662 169777662 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015172 exon16 c.C4427T p.S1476F . . . BAT2L2 23215 broad.mit.edu 36 1 169820212 169820212 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015172 exon30 c.C7666A p.L2556I . . . SLC9A11 284525 broad.mit.edu 36 1 171771612 171771612 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon15 c.G1755T p.K585N . . . SLC9A11 284525 broad.mit.edu 36 1 171809079 171809079 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon9 c.G911A p.R304K . . . SLC9A11 284525 broad.mit.edu 36 1 171823543 171823543 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178527 exon5 c.G407A p.G136E . . . KLHL20 27252 broad.mit.edu 36 1 172020949 172020949 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014458 exon12 c.C1771T p.R591W . . . SERPINC1 462 broad.mit.edu 36 1 172139813 172139813 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000488 exon7 c.G1232T p.G411V . . . SERPINC1 462 broad.mit.edu 36 1 172150655 172150655 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000488 exon2 c.C67T p.L23F . . . RC3H1 149041 broad.mit.edu 36 1 172182358 172182358 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172071 exon16 c.C2840A p.S947Y . . . SDHB 6390 broad.mit.edu 36 1 17226883 17226883 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003000 exon5 c.C488A p.S163Y . . . CACYBP 27101 broad.mit.edu 36 1 173240416 173240416 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014412 exon2 c.C59T p.A20V . . . MRPS14 63931 broad.mit.edu 36 1 173250506 173250506 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022100 exon3 c.C309A p.R103R . . . TNN 63923 broad.mit.edu 36 1 173313525 173313525 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022093 exon2 c.G348T p.E116D . . . TNN 63923 broad.mit.edu 36 1 173316132 173316132 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022093 exon4 c.G995A p.R332H . . . PAPPA2 60676 broad.mit.edu 36 1 174938403 174938403 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020318 exon9 c.C3274A p.L1092I . . . PAPPA2 60676 broad.mit.edu 36 1 175078213 175078213 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020318 exon23 c.A5376G p.X1792X . . . ASTN1 460 broad.mit.edu 36 1 175193544 175193544 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004319 exon11 c.C1780T p.L594F . . . ASTN1 460 broad.mit.edu 36 1 175400181 175400181 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004319 exon1 c.G255T p.E85D . . . FAM5B 57795 broad.mit.edu 36 1 175491817 175491817 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021165 exon3 c.A409C p.N137H . . . PADI6 353238 broad.mit.edu 36 1 17587602 17587602 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207421 exon7 c.C819A p.I273I . . . SEC16B 89866 broad.mit.edu 36 1 176183652 176183652 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033127 exon13 c.A1594T p.I532F . . . RASAL2 9462 broad.mit.edu 36 1 176681402 176681402 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004841 exon7 c.T1165A p.Y389N . . . C1orf49 84066 broad.mit.edu 36 1 176757019 176757019 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170723 exon8 c.C583T p.R195W . . . RALGPS2 55103 broad.mit.edu 36 1 177142540 177142540 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152663 exon19 c.C1637T p.S546L . . . C1orf125 126859 broad.mit.edu 36 1 177769627 177769627 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144696 exon24 c.G2790T p.E930D . . . C1orf125 126859 broad.mit.edu 36 1 177770542 177770542 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144696 exon25 c.G2853T p.E951D . . . TDRD5 163589 broad.mit.edu 36 1 177886634 177886634 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199092 exon9 c.A475G p.T159A . . . CEP350 9857 broad.mit.edu 36 1 178329849 178329849 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014810 exon34 c.T7986G p.S2662S . . . QSOX1 5768 broad.mit.edu 36 1 178414579 178414579 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002826 exon5 c.G543A p.A181A . . . QSOX1 5768 broad.mit.edu 36 1 178421817 178421817 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002826 exon8 c.G894T p.K298N . . . XPR1 9213 broad.mit.edu 36 1 179070637 179070637 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135669 exon10 c.G1139A p.R380Q . . . XPR1 9213 broad.mit.edu 36 1 179072376 179072376 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004736 exon11 c.C1402T p.R468X . . . CACNA1E 777 broad.mit.edu 36 1 179955581 179955581 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon13 c.C1710A p.V570V . . . CACNA1E 777 broad.mit.edu 36 1 179987919 179987919 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000721 exon27 c.A3749C p.D1250A . . . ZNF648 127665 broad.mit.edu 36 1 180293538 180293538 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009992 exon2 c.G231T p.E77D . . . GLUL 2752 broad.mit.edu 36 1 180624397 180624397 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002065 exon3 c.C99T p.I33I . . . RGS8 85397 broad.mit.edu 36 1 180902712 180902712 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033345 exon3 c.C100T p.R34X . . . DHX9 1660 broad.mit.edu 36 1 181117092 181117092 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001357 exon23 c.C2695T p.R899W . . . LAMC1 3915 broad.mit.edu 36 1 181352413 181352413 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002293 exon7 c.C1407T p.V469V . . . LAMC1 3915 broad.mit.edu 36 1 181357662 181357662 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002293 exon12 c.C2172T p.C724C . . . LAMC1 3915 broad.mit.edu 36 1 181370424 181370424 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002293 exon23 c.G3856A p.A1286T . . . LAMC1 3915 broad.mit.edu 36 1 181372325 181372325 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002293 exon25 c.C4296T p.I1432I . . . APOBEC4 403314 broad.mit.edu 36 1 181883572 181883572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203454 exon2 c.C968T p.P323L . . . EDEM3 80267 broad.mit.edu 36 1 182947539 182947539 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025191 exon15 c.T1632C p.S544S . . . FAM129A 116496 broad.mit.edu 36 1 183039421 183039421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052966 exon12 c.G1475A p.R492Q . . . FAM129A 116496 broad.mit.edu 36 1 183129912 183129912 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052966 exon3 c.T238G p.S80A . . . C1orf26 54823 broad.mit.edu 36 1 183420552 183420552 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105518 exon9 c.G1295A p.R432H . . . C1orf26 54823 broad.mit.edu 36 1 183457675 183457675 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105518 exon15 c.G2193T p.K731N . . . C1orf26 54823 broad.mit.edu 36 1 183526470 183526470 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105518 exon19 c.A2615G p.E872G . . . HMCN1 83872 broad.mit.edu 36 1 184218122 184218122 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031935 exon18 c.G2768A p.R923Q . . . HMCN1 83872 broad.mit.edu 36 1 184251185 184251185 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031935 exon31 c.T4902G p.D1634E . . . HMCN1 83872 broad.mit.edu 36 1 184417992 184417992 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031935 exon105 c.G16364A p.C5455Y . . . PRG4 10216 broad.mit.edu 36 1 184542416 184542416 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127708 exon6 c.G819T p.E273D . . . PRG4 10216 broad.mit.edu 36 1 184544542 184544542 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127708 exon6 c.A2945T p.K982M . . . TPR 7175 broad.mit.edu 36 1 184572347 184572347 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003292 exon33 c.A4609G p.T1537A . . . TPR 7175 broad.mit.edu 36 1 184582027 184582027 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003292 exon23 c.C2959T p.R987C . . . PLA2G4A 5321 broad.mit.edu 36 1 185201182 185201182 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024420 exon15 c.G1598A p.R533Q . . . FAM5C 339479 broad.mit.edu 36 1 188334171 188334171 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199051 exon8 c.A1901G p.K634R . . . RGS18 64407 broad.mit.edu 36 1 190420197 190420197 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130782 exon5 c.G598T p.D200Y . . . RGS21 431704 broad.mit.edu 36 1 190583122 190583122 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039152 exon3 c.A68G p.D23G . . . UBR4 23352 broad.mit.edu 36 1 19371950 19371950 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020765 exon25 c.C3516A p.F1172L . . . CFH 3075 broad.mit.edu 36 1 194982989 194982989 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000186 exon22 c.C3619A p.L1207I . . . CFHR1 3078 broad.mit.edu 36 1 195061345 195061345 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002113 exon2 c.T174C p.N58N . . . CFHR1 3078 broad.mit.edu 36 1 195062685 195062685 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002113 exon3 c.A357G p.R119R . . . F13B 2165 broad.mit.edu 36 1 195286567 195286567 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001994 exon10 c.G1621T p.D541Y . . . ASPM 259266 broad.mit.edu 36 1 195329005 195329005 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018136 exon21 c.G9094A p.A3032T . . . ASPM 259266 broad.mit.edu 36 1 195337108 195337108 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018136 exon18 c.G7896T p.Q2632H . . . ASPM 259266 broad.mit.edu 36 1 195353624 195353624 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018136 exon17 c.G3983T p.R1328I . . . ZBTB41 360023 broad.mit.edu 36 1 195395365 195395365 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194314 exon10 c.G2477A p.R826H . . . ZBTB41 360023 broad.mit.edu 36 1 195412329 195412329 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194314 exon7 c.A1867G p.K623E . . . ZBTB41 360023 broad.mit.edu 36 1 195436014 195436014 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194314 exon1 c.G213T p.K71N . . . CRB1 23418 broad.mit.edu 36 1 195663368 195663368 + Missense_Mutation SNP C T T rs62635654 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201253 exon7 c.C2290T p.R764C . . . NEK7 140609 broad.mit.edu 36 1 196513741 196513741 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133494 exon6 c.C400T p.P134S . . . ATP6V1G3 127124 broad.mit.edu 36 1 196759220 196759220 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133262 exon4 c.G281A p.S94N . . . PTPRC 5788 broad.mit.edu 36 1 196942623 196942623 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002838 exon9 c.G817T p.E273X . . . PTPRC 5788 broad.mit.edu 36 1 196948783 196948783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002838 exon12 c.G1244A p.R415K . . . NR5A2 2494 broad.mit.edu 36 1 198263631 198263631 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205860 exon1 c.A33C p.Q11H . . . NR5A2 2494 broad.mit.edu 36 1 198281228 198281228 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205860 exon4 c.G356T p.R119M . . . NR5A2 2494 broad.mit.edu 36 1 198409854 198409854 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205860 exon8 c.C1519T p.R507W . . . ZNF281 23528 broad.mit.edu 36 1 198644514 198644514 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012482 exon2 c.A943T p.K315X . . . KIF14 9928 broad.mit.edu 36 1 198805730 198805730 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014875 exon23 c.G3593T p.R1198I . . . KIF14 9928 broad.mit.edu 36 1 198835854 198835854 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014875 exon13 c.G2311T p.E771X . . . KIF14 9928 broad.mit.edu 36 1 198850118 198850118 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014875 exon4 c.G1406T p.R469I . . . KIF21B 23046 broad.mit.edu 36 1 199232048 199232048 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017596 exon15 c.G2176A p.A726T . . . KIF21B 23046 broad.mit.edu 36 1 199236479 199236479 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017596 exon10 c.C1455T p.I485I . . . LAD1 3898 broad.mit.edu 36 1 199618050 199618050 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005558 exon9 c.G1501A p.E501K . . . CSRP1 1465 broad.mit.edu 36 1 199724631 199724631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193572 exon4 c.C386T p.A129V . . . CSRP1 1465 broad.mit.edu 36 1 199725980 199725980 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193572 exon3 c.C228T p.G76G . . . NAV1 89796 broad.mit.edu 36 1 200019367 200019367 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167738 exon5 c.C1395A p.F465L . . . NAV1 89796 broad.mit.edu 36 1 200019475 200019475 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167738 exon5 c.G1503T p.M501I . . . GPR37L1 9283 broad.mit.edu 36 1 200364045 200364045 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004767 exon2 c.A1184T p.D395V . . . SYT2 127833 broad.mit.edu 36 1 200840270 200840270 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136504 exon3 c.A281G p.N94S . . . OTUD3 23252 broad.mit.edu 36 1 20104062 20104062 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015207 exon6 c.G830T p.R277I . . . ADORA1 134 broad.mit.edu 36 1 201401225 201401225 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000674 exon4 c.C555A p.F185L . . . ADORA1 134 broad.mit.edu 36 1 201401470 201401470 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000674 exon4 c.G800T p.S267I . . . CHIT1 1118 broad.mit.edu 36 1 201461422 201461422 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003465 exon3 c.G255T p.K85N . . . OPTC 26254 broad.mit.edu 36 1 201732801 201732801 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014359 exon3 c.C305T p.S102L . . . ATP2B4 493 broad.mit.edu 36 1 201919116 201919116 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001396 exon2 c.C160A p.L54I . . . ATP2B4 493 broad.mit.edu 36 1 201942887 201942887 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001396 exon9 c.C1227A p.F409L . . . LAX1 54900 broad.mit.edu 36 1 202010219 202010219 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017773 exon5 c.C984T p.P328P . . . ZC3H11A 9877 broad.mit.edu 36 1 202083138 202083138 + Missense_Mutation SNP C T T rs4019824 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014827 exon15 c.C1246T p.R416W . . . MDM4 4194 broad.mit.edu 36 1 202785071 202785071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002393 exon11 c.G1111A p.V371I . . . NFASC 23114 broad.mit.edu 36 1 203190081 203190081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160331 exon3 c.G340A p.A114T . . . CNTN2 6900 broad.mit.edu 36 1 203300461 203300461 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005076 exon12 c.C1479A p.F493L . . . RBBP5 5929 broad.mit.edu 36 1 203332589 203332589 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005057 exon12 c.A1240C p.N414H . . . NUAK2 81788 broad.mit.edu 36 1 203539576 203539576 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030952 exon7 c.C1512A p.L504L . . . RAB7L1 8934 broad.mit.edu 36 1 204006114 204006114 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135662 exon6 c.C591A p.S197S . . . SLC41A1 254428 broad.mit.edu 36 1 204045879 204045879 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173854 exon2 c.C314A p.P105Q . . . AVPR1B 553 broad.mit.edu 36 1 204391687 204391687 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000707 exon1 c.C624T p.F208F . . . DYRK3 8444 broad.mit.edu 36 1 204888500 204888500 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003582 exon3 c.C1334T p.S445F . . . DYRK3 8444 broad.mit.edu 36 1 204888589 204888589 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003582 exon3 c.C1423T p.R475W . . . IL20 50604 broad.mit.edu 36 1 205105861 205105861 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018724 exon1 c.C41T p.A14V . . . FAIM3 9214 broad.mit.edu 36 1 205153939 205153939 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193338 exon2 c.G161A p.G54E . . . PIGR 5284 broad.mit.edu 36 1 205177201 205177201 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002644 exon4 c.G907A p.D303N . . . CR2 1380 broad.mit.edu 36 1 205715157 205715157 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006658 exon14 c.C2689T p.P897S . . . CR1 1378 broad.mit.edu 36 1 205807796 205807796 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000651 exon25 c.C3957A p.I1319I . . . CR1L 1379 broad.mit.edu 36 1 205939212 205939212 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175710 exon8 c.C1198A p.L400I . . . CR1L 1379 broad.mit.edu 36 1 205957512 205957512 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175710 exon11 c.G1495T p.E499X . . . CD46 4179 broad.mit.edu 36 1 206023282 206023282 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172359 exon10 c.A1011C p.G337G . . . CD46 4179 broad.mit.edu 36 1 206025645 206025645 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172359 exon12 c.G1122T p.K374N . . . LAMB3 3914 broad.mit.edu 36 1 207869868 207869868 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017402 exon9 c.G969T p.E323D . . . HSD11B1 3290 broad.mit.edu 36 1 207946752 207946752 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005525 exon3 c.G295A p.A99T . . . C1orf107 27042 broad.mit.edu 36 1 208083616 208083616 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014388 exon11 c.G1979T p.G660V . . . PINK1 65018 broad.mit.edu 36 1 20837159 20837159 + Missense_Mutation SNP C T T rs17852513 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032409 exon2 c.C625T p.P209S PINK1,ovary,NS,Substitution - coding silent,-2 . . SYT14 255928 broad.mit.edu 36 1 208400782 208400782 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153262 exon8 c.T1440C p.N480N . . . KIF17 57576 broad.mit.edu 36 1 20863803 20863803 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020816 exon15 c.G2951A p.S984N . . . KIF17 57576 broad.mit.edu 36 1 20871249 20871249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020816 exon12 c.G2491T p.D831Y . . . TRAF5 7188 broad.mit.edu 36 1 209596357 209596357 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004619 exon4 c.G302T p.R101I . . . HP1BP3 50809 broad.mit.edu 36 1 20979489 20979489 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016287 exon2 c.T32C p.V11A . . . SLC30A1 7779 broad.mit.edu 36 1 209815802 209815802 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021194 exon2 c.G1075T p.E359X . . . SLC30A1 7779 broad.mit.edu 36 1 209815928 209815928 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021194 exon2 c.G949T p.D317Y . . . INTS7 25896 broad.mit.edu 36 1 210221094 210221094 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199812 exon10 c.T1194G p.S398R . . . INTS7 25896 broad.mit.edu 36 1 210256929 210256929 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199812 exon4 c.G431A p.R144H . . . C1orf227 149643 broad.mit.edu 36 1 211076077 211076077 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024601 exon2 c.A38T p.K13I . . . EIF4G3 8672 broad.mit.edu 36 1 21141127 21141127 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003760 exon9 c.A939G p.I313M . . . RPS6KC1 26750 broad.mit.edu 36 1 211480670 211480670 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012424 exon11 c.G1228A p.G410S . . . PROX1 5629 broad.mit.edu 36 1 212237184 212237184 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002763 exon2 c.G683A p.R228Q . . . CENPF 1063 broad.mit.edu 36 1 212881894 212881894 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon12 c.A3590C p.E1197A . . . CENPF 1063 broad.mit.edu 36 1 212882114 212882114 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon12 c.A3810G p.E1270E . . . CENPF 1063 broad.mit.edu 36 1 212883008 212883008 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon12 c.G4704T p.E1568D . . . CENPF 1063 broad.mit.edu 36 1 212883137 212883137 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon12 c.G4833T p.Q1611H . . . CENPF 1063 broad.mit.edu 36 1 212885422 212885422 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon13 c.G5886A p.Q1962Q . . . CENPF 1063 broad.mit.edu 36 1 212887038 212887038 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016343 exon13 c.C7502A p.S2501Y . . . KCNK2 3776 broad.mit.edu 36 1 213326613 213326613 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017425 exon2 c.T326C p.V109A . . . KCTD3 51133 broad.mit.edu 36 1 213818978 213818978 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016121 exon7 c.G410A p.R137H . . . USH2A 7399 broad.mit.edu 36 1 213910983 213910983 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon64 c.C14087A p.S4696Y . . . USH2A 7399 broad.mit.edu 36 1 214038911 214038911 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon50 c.T9919C p.C3307R . . . USH2A 7399 broad.mit.edu 36 1 214436565 214436565 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon19 c.C4204A p.L1402I . . . USH2A 7399 broad.mit.edu 36 1 214438286 214438286 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon18 c.G4075A p.E1359K . . . USH2A 7399 broad.mit.edu 36 1 214490934 214490934 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon12 c.A2101G p.T701A . . . USH2A 7399 broad.mit.edu 36 1 214563552 214563552 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon8 c.C1437T p.F479F . . . USH2A 7399 broad.mit.edu 36 1 214604983 214604983 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon4 c.G719T p.R240I . . . USH2A 7399 broad.mit.edu 36 1 214661866 214661866 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206933 exon2 c.G436T p.A146S . . . ESRRG 2104 broad.mit.edu 36 1 214759265 214759265 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206594 exon8 c.C915T p.D305D . . . ESRRG 2104 broad.mit.edu 36 1 214804325 214804325 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206594 exon7 c.T652A p.L218M . . . ALPL 249 broad.mit.edu 36 1 21776679 21776679 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000478 exon12 c.G1526A p.G509D . . . EPRS 2058 broad.mit.edu 36 1 218237015 218237015 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004446 exon18 c.C2474T p.S825F . . . EPRS 2058 broad.mit.edu 36 1 218274944 218274944 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004446 exon3 c.C166T p.R56C . . . IARS2 55699 broad.mit.edu 36 1 218377955 218377955 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018060 exon17 c.G2122A p.E708K . . . USP48 84196 broad.mit.edu 36 1 21914519 21914519 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032236 exon15 c.G1913T p.R638I . . . HHIPL2 79802 broad.mit.edu 36 1 220762661 220762661 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024746 exon9 c.G2080A p.V694I . . . MIA3 375056 broad.mit.edu 36 1 220861136 220861136 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198551 exon2 c.G146A p.R49H . . . MIA3 375056 broad.mit.edu 36 1 220888804 220888804 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198551 exon8 c.G3620T p.R1207I . . . C1orf58 148362 broad.mit.edu 36 1 220970034 220970034 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144695 exon11 c.C881T p.T294I . . . DISP1 84976 broad.mit.edu 36 1 221183201 221183201 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon2 c.C413T p.T138M . . . DISP1 84976 broad.mit.edu 36 1 221243105 221243105 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon8 c.G1743A p.W581X . . . DISP1 84976 broad.mit.edu 36 1 221243822 221243822 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon8 c.C2460T p.S820S . . . DISP1 84976 broad.mit.edu 36 1 221244439 221244439 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon8 c.C3077A p.S1026Y . . . DISP1 84976 broad.mit.edu 36 1 221245592 221245592 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon8 c.G4230T p.E1410D . . . DISP1 84976 broad.mit.edu 36 1 221245805 221245805 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032890 exon8 c.A4443G p.Q1481Q . . . TLR5 7100 broad.mit.edu 36 1 221351478 221351478 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003268 exon6 c.C1519A p.L507M . . . CAPN2 824 broad.mit.edu 36 1 222015913 222015913 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146068 exon13 c.G1303A p.D435N . . . NVL 4931 broad.mit.edu 36 1 222481957 222481957 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002533 exon23 c.C2565T p.S855S . . . NVL 4931 broad.mit.edu 36 1 222542181 222542181 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002533 exon14 c.C1713T p.G571G . . . NVL 4931 broad.mit.edu 36 1 222559478 222559478 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002533 exon7 c.C629A p.S210Y . . . WDR26 80232 broad.mit.edu 36 1 222653251 222653251 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025160 exon10 c.C1528T p.R510W . . . LBR 3930 broad.mit.edu 36 1 223658785 223658785 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002296 exon13 c.G1631A p.R544H . . . LBR 3930 broad.mit.edu 36 1 223664670 223664670 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002296 exon10 c.G1260T p.M420I . . . EPHX1 2052 broad.mit.edu 36 1 224083069 224083069 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136018 exon2 c.C16A p.L6I . . . C1orf55 163859 broad.mit.edu 36 1 224246799 224246799 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152608 exon4 c.A443C p.K148T . . . LIN9 286826 broad.mit.edu 36 1 224487763 224487763 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173083 exon13 c.C1378T p.R460W . . . LIN9 286826 broad.mit.edu 36 1 224540682 224540682 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173083 exon6 c.C547T p.R183W . . . PARP1 142 broad.mit.edu 36 1 224618368 224618368 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001618 exon20 c.C2685T p.I895I . . . PARP1 142 broad.mit.edu 36 1 224619421 224619421 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001618 exon19 c.C2563A p.H855N . . . ITPKB 3707 broad.mit.edu 36 1 224893921 224893921 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002221 exon6 c.A2513G p.E838G . . . ITPKB 3707 broad.mit.edu 36 1 224989946 224989946 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002221 exon2 c.G1837A p.E613K . . . ITPKB 3707 broad.mit.edu 36 1 224990147 224990147 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002221 exon2 c.G1636A p.E546K . . . PSEN2 5664 broad.mit.edu 36 1 225138187 225138187 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000447 exon5 c.C300T p.I100I . . . CDC42BPA 8476 broad.mit.edu 36 1 225326575 225326575 + Silent SNP G A A rs55845581 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014826 exon19 c.C2541T p.I847I . . . ZNF678 339500 broad.mit.edu 36 1 225909715 225909715 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178549 exon4 c.G1306T p.E436X . . . ARF1 375 broad.mit.edu 36 1 226352277 226352277 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024226 exon5 c.C486T p.S162S . . . HIST3H3 8290 broad.mit.edu 36 1 226679432 226679432 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003493 exon1 c.G218A p.R73H . . . NUP133 55746 broad.mit.edu 36 1 227669088 227669088 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018230 exon16 c.G2115A p.E705E . . . EPHA8 2046 broad.mit.edu 36 1 22788379 22788379 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006943 exon5 c.C1408A p.L470M . . . GALNT2 2590 broad.mit.edu 36 1 228467675 228467675 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004481 exon14 c.T1379A p.L460X . . . EXOC8 149371 broad.mit.edu 36 1 229538544 229538544 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175876 exon1 c.T1571C p.V524A . . . EPHB2 2048 broad.mit.edu 36 1 23062158 23062158 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017449 exon4 c.G853A p.A285T . . . EPHB2 2048 broad.mit.edu 36 1 23064164 23064164 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017449 exon5 c.G1175A p.R392H . . . SIPA1L2 57568 broad.mit.edu 36 1 230667637 230667637 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020808 exon7 c.C2392T p.R798X . . . SIPA1L2 57568 broad.mit.edu 36 1 230716803 230716803 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020808 exon1 c.C906T p.H302H . . . KIAA1383 54627 broad.mit.edu 36 1 231008888 231008888 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019090 exon1 c.C1496T p.S499F . . . PCNXL2 80003 broad.mit.edu 36 1 231200666 231200666 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon32 c.C5745T p.G1915G . . . PCNXL2 80003 broad.mit.edu 36 1 231201733 231201733 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014801 exon31 c.G5344A p.V1782I . . . KIAA1804 84451 broad.mit.edu 36 1 231557367 231557367 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032435 exon4 c.G1298A p.R433K . . . KIAA1804 84451 broad.mit.edu 36 1 231564424 231564424 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032435 exon5 c.G1314T p.E438D . . . TARBP1 6894 broad.mit.edu 36 1 232669882 232669882 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005646 exon4 c.G1237T p.E413X . . . LUZP1 7798 broad.mit.edu 36 1 23293301 23293301 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142546 exon3 c.G41A p.R14H . . . ARID4B 51742 broad.mit.edu 36 1 233443808 233443808 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016374 exon17 c.A1740G p.G580G . . . B3GALNT2 148789 broad.mit.edu 36 1 233684187 233684187 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152490 exon10 c.C1215T p.P405P . . . LYST 1130 broad.mit.edu 36 1 233927191 233927191 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000081 exon46 c.C10379A p.P3460H . . . LYST 1130 broad.mit.edu 36 1 234010825 234010825 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000081 exon16 c.T5177G p.F1726C . . . LYST 1130 broad.mit.edu 36 1 234039215 234039215 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000081 exon5 c.T1526G p.F509C . . . ERO1LB 56605 broad.mit.edu 36 1 234456400 234456400 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019891 exon12 c.G844T p.E282X . . . ERO1LB 56605 broad.mit.edu 36 1 234499809 234499809 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019891 exon2 c.C211T p.R71C . . . HEATR1 55127 broad.mit.edu 36 1 234795927 234795927 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018072 exon31 c.C4350A p.V1450V . . . HEATR1 55127 broad.mit.edu 36 1 234825553 234825553 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018072 exon8 c.C1000T p.L334F . . . HEATR1 55127 broad.mit.edu 36 1 234827851 234827851 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018072 exon5 c.G553T p.D185Y . . . MTR 4548 broad.mit.edu 36 1 235042681 235042681 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000254 exon6 c.G523A p.A175T . . . MTR 4548 broad.mit.edu 36 1 235082520 235082520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000254 exon17 c.G1772A p.R591Q . . . RYR2 6262 broad.mit.edu 36 1 235726485 235726485 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon20 c.G2013T p.K671N . . . RYR2 6262 broad.mit.edu 36 1 235733330 235733330 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon22 c.G2515A p.E839K . . . RYR2 6262 broad.mit.edu 36 1 235821771 235821771 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon32 c.T4270C p.S1424P . . . RYR2 6262 broad.mit.edu 36 1 235844540 235844540 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon37 c.T5489C p.I1830T . . . RYR2 6262 broad.mit.edu 36 1 235844650 235844650 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon37 c.G5599T p.E1867X . . . RYR2 6262 broad.mit.edu 36 1 235864895 235864895 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon44 c.C6772T p.R2258C . . . RYR2 6262 broad.mit.edu 36 1 235884333 235884333 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon52 c.A7961G p.Q2654R . . . RYR2 6262 broad.mit.edu 36 1 235908026 235908026 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon61 c.C8886A p.F2962L . . . RYR2 6262 broad.mit.edu 36 1 235960187 235960187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon77 c.C10843T p.R3615W . . . RYR2 6262 broad.mit.edu 36 1 236001993 236001993 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001035 exon86 c.C11616A p.I3872I . . . RYR2 6262 broad.mit.edu 36 1 236008678 236008678 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon88 c.G11865T p.Q3955H . . . RYR2 6262 broad.mit.edu 36 1 236015938 236015938 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon91 c.A13307C p.K4436T . . . RYR2 6262 broad.mit.edu 36 1 236049018 236049018 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035 exon101 c.C14493T p.I4831I . . . ZP4 57829 broad.mit.edu 36 1 236115222 236115222 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021186 exon9 c.G1177T p.D393Y . . . ZP4 57829 broad.mit.edu 36 1 236115797 236115797 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021186 exon7 c.C852T p.S284S . . . TCEA3 6920 broad.mit.edu 36 1 23616441 23616441 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003196 exon4 c.G268T p.G90X . . . E2F2 1870 broad.mit.edu 36 1 23709003 23709003 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004091 exon7 c.G1270A p.D424N . . . FMN2 56776 broad.mit.edu 36 1 238564104 238564104 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020066 exon13 c.T4717G p.F1573V . . . KMO 8564 broad.mit.edu 36 1 239818722 239818722 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003679 exon12 c.G1065A p.A355A . . . EXO1 9156 broad.mit.edu 36 1 240115382 240115382 + Silent SNP G A A rs61751859 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130398 exon15 c.G2355A p.P785P . . . PLD5 200150 broad.mit.edu 36 1 240518347 240518347 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195811 exon3 c.G249A p.K83K . . . C1orf101 257044 broad.mit.edu 36 1 242790605 242790605 + Nonsense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173807 exon10 c.A1042T p.R348X . . . C1orf101 257044 broad.mit.edu 36 1 242840189 242840189 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173807 exon19 c.A2428G p.T810A . . . IL22RA1 58985 broad.mit.edu 36 1 24320095 24320095 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021258 exon7 c.C1512T p.I504I . . . SMYD3 64754 broad.mit.edu 36 1 243979517 243979517 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022743 exon12 c.G1081T p.E361X . . . CNST 163882 broad.mit.edu 36 1 244821499 244821499 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001139459 exon2 c.C12T p.S4S . . . AHCTF1 25909 broad.mit.edu 36 1 245080340 245080340 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015446 exon33 c.T5618G p.V1873G . . . ZNF124 7678 broad.mit.edu 36 1 245387106 245387106 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003431 exon4 c.G255A p.E85E . . . GRHL3 57822 broad.mit.edu 36 1 24541802 24541802 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198173 exon10 c.G1238A p.R413Q . . . ZNF496 84838 broad.mit.edu 36 1 245558776 245558776 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032752 exon4 c.G406T p.D136Y . . . NLRP3 114548 broad.mit.edu 36 1 245653248 245653248 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079821 exon4 c.G377A p.R126K . . . NLRP3 114548 broad.mit.edu 36 1 245655150 245655150 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079821 exon5 c.G1782T p.K594N . . . NLRP3 114548 broad.mit.edu 36 1 245666036 245666036 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079821 exon8 c.G2640T p.K880N . . . NLRP3 114548 broad.mit.edu 36 1 245674613 245674613 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079821 exon10 c.G2878A p.D960N . . . OR6F1 343169 broad.mit.edu 36 1 245942631 245942631 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005286 exon1 c.T50G p.F17C . . . OR1C1 26188 broad.mit.edu 36 1 245987522 245987522 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012353 exon1 c.C810T p.S270S . . . OR14A16 284532 broad.mit.edu 36 1 246045450 246045450 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001966 exon1 c.C205A p.L69I . . . OR2M5 127059 broad.mit.edu 36 1 246375775 246375775 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004690 exon1 c.C703T p.R235C . . . OR2M2 391194 broad.mit.edu 36 1 246410922 246410922 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004688 exon1 c.A1012G p.K338E . . . NIPAL3 57185 broad.mit.edu 36 1 24641254 24641254 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020448 exon4 c.C285A p.A95A . . . OR2M4 26245 broad.mit.edu 36 1 246469739 246469739 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017504 exon1 c.G886T p.E296X . . . OR2T33 391195 broad.mit.edu 36 1 246502810 246502810 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004695 exon1 c.A930C p.K310N . . . OR2T4 127074 broad.mit.edu 36 1 246592050 246592050 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004696 exon1 c.T545C p.F182S . . . OR2T34 127068 broad.mit.edu 36 1 246804045 246804045 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001821 exon1 c.C637A p.L213I . . . OR2T27 403239 broad.mit.edu 36 1 246880395 246880395 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001824 exon1 c.C414T p.R138R . . . OR2T27 403239 broad.mit.edu 36 1 246880565 246880565 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001824 exon1 c.C244T p.L82L . . . SH3BP5L 80851 broad.mit.edu 36 1 247073857 247073857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030645 exon6 c.G665A p.S222N . . . SRRM1 10250 broad.mit.edu 36 1 24850632 24850632 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005839 exon6 c.C667T p.L223F . . . SYF2 25949 broad.mit.edu 36 1 25422401 25422401 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207170 exon6 c.C549A p.F183L . . . RHD 6007 broad.mit.edu 36 1 25483756 25483756 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127691 exon2 c.C254A p.A85E . . . TMEM50A 23585 broad.mit.edu 36 1 25539622 25539622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014313 exon2 c.C58T p.R20C . . . TMEM50A 23585 broad.mit.edu 36 1 25550759 25550759 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014313 exon4 c.C262A p.L88M . . . MAN1C1 57134 broad.mit.edu 36 1 25885575 25885575 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020379 exon2 c.C598T p.R200C . . . FAM54B 56181 broad.mit.edu 36 1 26028708 26028708 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099627 exon6 c.G464T p.R155M . . . C1orf135 79000 broad.mit.edu 36 1 26034516 26034516 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024037 exon3 c.G629T p.S210I . . . PAQR7 164091 broad.mit.edu 36 1 26062369 26062369 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178422 exon2 c.G549A p.W183X . . . STMN1 3925 broad.mit.edu 36 1 26102813 26102813 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203399 exon3 c.C92A p.S31Y . . . EXTL1 2134 broad.mit.edu 36 1 26228310 26228310 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004455 exon2 c.C819T p.C273C . . . EXTL1 2134 broad.mit.edu 36 1 26230276 26230276 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004455 exon5 c.G1168A p.A390T . . . EXTL1 2134 broad.mit.edu 36 1 26232921 26232921 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004455 exon9 c.G1666A p.A556T . . . TRIM63 84676 broad.mit.edu 36 1 26257535 26257535 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032588 exon5 c.A764C p.K255T . . . PDIK1L 149420 broad.mit.edu 36 1 26321245 26321245 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152835 exon3 c.G616T p.E206X . . . PDIK1L 149420 broad.mit.edu 36 1 26321349 26321349 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152835 exon3 c.C720A p.I240I . . . ARID1A 8289 broad.mit.edu 36 1 26972017 26972017 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139135 exon14 c.C3667T p.R1223C . . . ARID1A 8289 broad.mit.edu 36 1 26978137 26978137 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139135 exon20 c.C4510T p.R1504X . . . PIGV 55650 broad.mit.edu 36 1 26993829 26993829 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017837 exon3 c.C717T p.A239A . . . STX12 23673 broad.mit.edu 36 1 28018813 28018813 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177424 exon8 c.C715T p.R239X . . . PTAFR 5724 broad.mit.edu 36 1 28349162 28349162 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164721 exon3 c.G958A p.A320T . . . PTAFR 5724 broad.mit.edu 36 1 28349460 28349460 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164721 exon3 c.G660A p.Q220Q . . . DNAJC8 22826 broad.mit.edu 36 1 28400465 28400465 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014280 exon9 c.A643C p.S215R . . . PHACTR4 65979 broad.mit.edu 36 1 28664905 28664905 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023923 exon4 c.C424A p.L142I . . . RCC1 1104 broad.mit.edu 36 1 28736992 28736992 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001048195 exon11 c.C1203T p.D401D . . . YTHDF2 51441 broad.mit.edu 36 1 28943052 28943052 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016258 exon4 c.G1683T p.E561D . . . SRSF4 6429 broad.mit.edu 36 1 29347585 29347585 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005626 exon6 c.C1409A p.S470Y . . . PTPRU 10076 broad.mit.edu 36 1 29524719 29524719 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005704 exon31 c.G4300A p.D1434N . . . SDC3 9672 broad.mit.edu 36 1 31124062 31124062 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014654 exon2 c.C251T p.S84L . . . ZCCHC17 51538 broad.mit.edu 36 1 31555562 31555562 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016505 exon2 c.A30C p.E10D . . . COL16A1 1307 broad.mit.edu 36 1 31936095 31936095 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001856 exon6 c.C656T p.S219L . . . COL16A1 1307 broad.mit.edu 36 1 31936297 31936297 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001856 exon6 c.G454A p.D152N . . . SPOCD1 90853 broad.mit.edu 36 1 32052715 32052715 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144569 exon2 c.A807G p.G269G . . . SPOCD1 90853 broad.mit.edu 36 1 32052901 32052901 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144569 exon2 c.G621T p.K207N . . . SPOCD1 90853 broad.mit.edu 36 1 32053511 32053511 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144569 exon2 c.C11T p.A4V . . . PRDM16 63976 broad.mit.edu 36 1 3318517 3318517 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022114 exon9 c.C1896T p.D632D . . . TRIM62 55223 broad.mit.edu 36 1 33397970 33397970 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018207 exon3 c.C667T p.R223C . . . ZSCAN20 7579 broad.mit.edu 36 1 33733489 33733489 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145238 exon8 c.G2958A p.P986P . . . CSMD2 114784 broad.mit.edu 36 1 33759666 33759666 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon67 c.C10149T p.F3383F . . . CSMD2 114784 broad.mit.edu 36 1 33819016 33819016 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon49 c.C7317A p.S2439R . . . CSMD2 114784 broad.mit.edu 36 1 33852732 33852732 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon40 c.A5972G p.N1991S . . . CSMD2 114784 broad.mit.edu 36 1 33884899 33884899 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon29 c.C4590T p.S1530S . . . CSMD2 114784 broad.mit.edu 36 1 33981470 33981470 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052896 exon14 c.C2051T p.T684I . . . C1orf94 84970 broad.mit.edu 36 1 34439176 34439176 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032884 exon3 c.C656T p.P219L . . . DLGAP3 58512 broad.mit.edu 36 1 35138347 35138347 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080418 exon2 c.G1222T p.D408Y . . . DLGAP3 58512 broad.mit.edu 36 1 35142906 35142906 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080418 exon1 c.C666A p.S222S . . . ZMYM1 79830 broad.mit.edu 36 1 35352055 35352055 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024772 exon10 c.C2037A p.F679L . . . ZMYM1 79830 broad.mit.edu 36 1 35352467 35352467 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024772 exon10 c.C2449T p.L817L . . . SFPQ 6421 broad.mit.edu 36 1 35425235 35425235 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005066 exon9 c.G1940A p.G647D . . . SFPQ 6421 broad.mit.edu 36 1 35425423 35425423 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005066 exon8 c.G1832A p.R611Q . . . KIAA0319L 79932 broad.mit.edu 36 1 35709143 35709143 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024874 exon6 c.A1021C p.T341P . . . TFAP2E 339488 broad.mit.edu 36 1 35828850 35828850 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178548 exon6 c.C933T p.F311F . . . EIF2C1 26523 broad.mit.edu 36 1 36131370 36131370 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012199 exon4 c.G416A p.R139Q . . . TRAPPC3 27095 broad.mit.edu 36 1 36378345 36378345 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014408 exon2 c.C52T p.L18F . . . THRAP3 9967 broad.mit.edu 36 1 36527731 36527731 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005119 exon5 c.C1524T p.S508S . . . C1orf113 79729 broad.mit.edu 36 1 36558037 36558037 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024676 exon11 c.G853T p.A285S . . . C1orf113 79729 broad.mit.edu 36 1 36558360 36558360 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024676 exon11 c.C1176A p.F392L . . . CCDC27 148870 broad.mit.edu 36 1 3660596 3660596 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152492 exon2 c.C373T p.R125X . . . CCDC27 148870 broad.mit.edu 36 1 3663214 3663214 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152492 exon4 c.G611T p.R204I . . . CSF3R 1441 broad.mit.edu 36 1 36710851 36710851 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172313 exon7 c.C697T p.R233W . . . CSF3R 1441 broad.mit.edu 36 1 36711673 36711673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172313 exon6 c.C623T p.A208V . . . KIAA0562 9731 broad.mit.edu 36 1 3737618 3737618 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014704 exon13 c.C1688A p.S563Y . . . KIAA0562 9731 broad.mit.edu 36 1 3741436 3741436 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014704 exon11 c.T1398A p.P466P . . . KIAA0562 9731 broad.mit.edu 36 1 3755042 3755042 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014704 exon3 c.C277T p.R93X . . . KIAA0562 9731 broad.mit.edu 36 1 3755156 3755156 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014704 exon3 c.C163T p.R55X . . . MEAF6 64769 broad.mit.edu 36 1 37740009 37740009 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022756 exon5 c.G516T p.K172N . . . SNIP1 79753 broad.mit.edu 36 1 37792374 37792374 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024700 exon1 c.G44T p.R15I . . . GNL2 29889 broad.mit.edu 36 1 37805043 37805043 + Nonstop_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013285 exon16 c.A2196C p.X732Y . . . GNL2 29889 broad.mit.edu 36 1 37806494 37806494 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013285 exon14 c.A1920G p.R640R . . . GNL2 29889 broad.mit.edu 36 1 37813863 37813863 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013285 exon10 c.C1063T p.R355C . . . GNL2 29889 broad.mit.edu 36 1 37830916 37830916 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013285 exon3 c.A228G p.P76P . . . C1orf174 339448 broad.mit.edu 36 1 3797017 3797017 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207356 exon3 c.C594A p.F198L . . . MACF1 23499 broad.mit.edu 36 1 39322656 39322656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012090 exon3 c.C179T p.S60L . . . MACF1 23499 broad.mit.edu 36 1 39521719 39521719 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012090 exon10 c.C875T p.S292L . . . MACF1 23499 broad.mit.edu 36 1 39572803 39572803 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033044 exon1 c.C3276A p.F1092L . . . MACF1 23499 broad.mit.edu 36 1 39573689 39573689 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033044 exon1 c.G4162T p.E1388X . . . MACF1 23499 broad.mit.edu 36 1 39617524 39617524 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012090 exon50 c.G7153T p.V2385L . . . KIAA0754 643314 broad.mit.edu 36 1 39649060 39649060 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015038 exon1 c.C536A p.S179Y . . . PABPC4 8761 broad.mit.edu 36 1 39810840 39810840 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135653 exon2 c.C199T p.R67W . . . NT5C1A 84618 broad.mit.edu 36 1 39899380 39899380 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032526 exon5 c.C699T p.F233F . . . PPIE 10450 broad.mit.edu 36 1 39987310 39987310 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006112 exon8 c.C657T p.F219F . . . TRIT1 54802 broad.mit.edu 36 1 40080159 40080159 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017646 exon11 c.C1248A p.S416S . . . MYCL1 4610 broad.mit.edu 36 1 40136152 40136152 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033082 exon3 c.C664T p.R222X . . . MFSD2A 84879 broad.mit.edu 36 1 40205183 40205183 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136493 exon8 c.G958A p.A320T . . . TMCO2 127391 broad.mit.edu 36 1 40489598 40489598 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008740 exon2 c.T294G p.I98M . . . SMAP2 64744 broad.mit.edu 36 1 40648069 40648069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198979 exon4 c.G362A p.R121Q . . . SMAP2 64744 broad.mit.edu 36 1 40654581 40654581 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198979 exon8 c.G813A p.T271T . . . ZNF643 65243 broad.mit.edu 36 1 40701139 40701139 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023070 exon5 c.G896T p.R299I . . . ZNF643 65243 broad.mit.edu 36 1 40701825 40701825 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023070 exon5 c.A1582C p.N528H . . . RIMS3 9783 broad.mit.edu 36 1 40880061 40880061 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014747 exon3 c.G124A p.A42T . . . CTPS 1503 broad.mit.edu 36 1 41226933 41226933 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001905 exon5 c.G519T p.E173D . . . CTPS 1503 broad.mit.edu 36 1 41240474 41240474 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001905 exon11 c.G1150T p.A384S . . . CTPS 1503 broad.mit.edu 36 1 41245791 41245791 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001905 exon14 c.G1380A p.K460K . . . SLFNL1 200172 broad.mit.edu 36 1 41255962 41255962 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144990 exon3 c.T889G p.F297V . . . HIVEP3 59269 broad.mit.edu 36 1 41822564 41822564 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024503 exon4 c.C492T p.F164F . . . GUCA2A 2980 broad.mit.edu 36 1 42401803 42401803 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033553 exon2 c.G141A p.E47E . . . CCDC30 728621 broad.mit.edu 36 1 42783811 42783811 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080850 exon4 c.C399T p.S133S . . . LEPRE1 64175 broad.mit.edu 36 1 42993839 42993839 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022356 exon6 c.T1137G p.A379A . . . EBNA1BP2 10969 broad.mit.edu 36 1 43409096 43409096 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006824 exon4 c.G365A p.R122H . . . WDR65 149465 broad.mit.edu 36 1 43448274 43448274 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152498 exon11 c.C2029A p.L677I . . . TIE1 7075 broad.mit.edu 36 1 43556285 43556285 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005424 exon17 c.C2877T p.F959F . . . KIAA0467 23334 broad.mit.edu 36 1 43670540 43670540 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015284 exon22 c.G2588A p.R863H . . . HYI 81888 broad.mit.edu 36 1 43690217 43690217 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031207 exon4 c.T481C p.Y161H . . . PTPRF 5792 broad.mit.edu 36 1 43858743 43858743 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130440 exon30 c.G5243A p.R1748H . . . B4GALT2 8704 broad.mit.edu 36 1 44223179 44223179 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005417 exon4 c.C605T p.A202V . . . B4GALT2 8704 broad.mit.edu 36 1 44223817 44223817 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005417 exon6 c.G905A p.R302Q . . . SLC6A9 6536 broad.mit.edu 36 1 44235978 44235978 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201649 exon14 c.G1947A p.K649K . . . KIF2C 11004 broad.mit.edu 36 1 44994478 44994478 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006845 exon10 c.C959T p.S320L . . . TESK2 10420 broad.mit.edu 36 1 45583702 45583702 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007170 exon11 c.C1113A p.I371I . . . NASP 4678 broad.mit.edu 36 1 45852396 45852396 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195193 exon6 c.G1356A p.E452E . . . CCDC17 149483 broad.mit.edu 36 1 45859245 45859245 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114938 exon11 c.C1516A p.L506I . . . MAST2 23139 broad.mit.edu 36 1 46273092 46273092 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015112 exon29 c.C4164T p.L1388L . . . MAST2 23139 broad.mit.edu 36 1 46273423 46273423 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015112 exon29 c.C4495T p.R1499C . . . MAST2 23139 broad.mit.edu 36 1 46273565 46273565 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015112 exon29 c.C4637A p.P1546H . . . CYP4B1 1580 broad.mit.edu 36 1 47037491 47037491 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099772 exon1 c.A151G p.T51A . . . AJAP1 55966 broad.mit.edu 36 1 4729800 4729800 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042478 exon3 c.T857C p.I286T . . . AJAP1 55966 broad.mit.edu 36 1 4732373 4732373 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042478 exon4 c.C1091A p.S364Y . . . CYP4A22 284541 broad.mit.edu 36 1 47381572 47381572 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010969 exon5 c.C555A p.V185V . . . STIL 6491 broad.mit.edu 36 1 47539879 47539879 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003035 exon5 c.G394T p.E132X . . . CMPK1 51727 broad.mit.edu 36 1 47606830 47606830 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016308 exon2 c.G274T p.G92X . . . BEND5 79656 broad.mit.edu 36 1 48997377 48997377 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024603 exon3 c.C527A p.A176D . . . ELAVL4 1996 broad.mit.edu 36 1 50439193 50439193 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144774 exon7 c.T857C p.F286S . . . RNF11 26994 broad.mit.edu 36 1 51508310 51508310 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014372 exon2 c.G218T p.R73I . . . EPS15 2060 broad.mit.edu 36 1 51660112 51660112 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159969 exon1 c.G105T p.K35N . . . OSBPL9 114883 broad.mit.edu 36 1 51983809 51983809 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024586 exon5 c.G332T p.G111V . . . NRD1 4898 broad.mit.edu 36 1 52027831 52027831 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101662 exon30 c.T3255C p.V1085V . . . ZFYVE9 9372 broad.mit.edu 36 1 52477604 52477604 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004799 exon4 c.G1927A p.D643N . . . ZFYVE9 9372 broad.mit.edu 36 1 52534156 52534156 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004799 exon12 c.T3252G p.L1084L . . . CC2D1B 200014 broad.mit.edu 36 1 52594664 52594664 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032449 exon17 c.C1935T p.G645G . . . ZCCHC11 23318 broad.mit.edu 36 1 52696708 52696708 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon20 c.G3323A p.R1108Q . . . ZCCHC11 23318 broad.mit.edu 36 1 52733707 52733707 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon6 c.G1246T p.D416Y . . . ZCCHC11 23318 broad.mit.edu 36 1 52735279 52735279 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon5 c.G1164A p.T388T . . . ZCCHC11 23318 broad.mit.edu 36 1 52754189 52754189 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon3 c.G844T p.E282X . . . ZCCHC11 23318 broad.mit.edu 36 1 52763829 52763829 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon2 c.G712A p.D238N . . . ZCCHC11 23318 broad.mit.edu 36 1 52764288 52764288 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015269 exon2 c.G253T p.D85Y . . . ZYG11B 79699 broad.mit.edu 36 1 53018245 53018245 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024646 exon4 c.A1084C p.I362L . . . PODN 127435 broad.mit.edu 36 1 53319102 53319102 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199081 exon10 c.G1714A p.D572N . . . TMEM48 55706 broad.mit.edu 36 1 54039009 54039009 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018087 exon11 c.G1167A p.T389T . . . LDLRAD1 388633 broad.mit.edu 36 1 54250443 54250443 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010978 exon4 c.A301C p.T101P . . . DHCR24 1718 broad.mit.edu 36 1 55103657 55103657 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014762 exon6 c.G927T p.E309D . . . USP24 23358 broad.mit.edu 36 1 55310122 55310122 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015306 exon67 c.T7753C p.S2585P USP24,kidney,NS,Substitution - coding silent,+2 . . PRKAA2 5563 broad.mit.edu 36 1 56932072 56932072 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006252 exon5 c.C522T p.C174C . . . C1orf168 199920 broad.mit.edu 36 1 56958482 56958482 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004303 exon18 c.G2083A p.D695N . . . C8A 731 broad.mit.edu 36 1 57144942 57144942 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000562 exon8 c.G1111T p.D371Y . . . DAB1 1600 broad.mit.edu 36 1 57374833 57374833 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021080 exon6 c.G277T p.G93X . . . OMA1 115209 broad.mit.edu 36 1 58719357 58719357 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145243 exon9 c.G1443A p.T481T . . . HOOK1 51361 broad.mit.edu 36 1 60101057 60101057 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015888 exon16 c.C1546T p.R516C . . . NFIA 4774 broad.mit.edu 36 1 61621527 61621527 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145512 exon8 c.C1112T p.S371L . . . INADL 10207 broad.mit.edu 36 1 62004655 62004655 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176877 exon4 c.G306A p.S102S . . . L1TD1 54596 broad.mit.edu 36 1 62445170 62445170 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164835 exon4 c.G282T p.E94D . . . KANK4 163782 broad.mit.edu 36 1 62491418 62491418 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181712 exon8 c.T2591C p.I864T . . . DOCK7 85440 broad.mit.edu 36 1 62712266 62712266 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033407 exon47 c.C6094A p.L2032I . . . ALG6 29929 broad.mit.edu 36 1 63652326 63652326 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013339 exon10 c.G823T p.V275L . . . UBE2U 148581 broad.mit.edu 36 1 64443975 64443975 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152489 exon2 c.G132T p.Q44H . . . CACHD1 57685 broad.mit.edu 36 1 64841126 64841126 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020925 exon4 c.C307T p.R103X . . . RAVER2 55225 broad.mit.edu 36 1 65051060 65051060 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018211 exon10 c.C1693T p.R565W . . . AK4 205 broad.mit.edu 36 1 65464373 65464373 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005353 exon6 c.G597A p.T199T . . . TAS1R1 80835 broad.mit.edu 36 1 6557540 6557540 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138697 exon3 c.A761G p.E254G . . . DNAJC6 9829 broad.mit.edu 36 1 65630869 65630869 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014787 exon12 c.G1465A p.A489T . . . C1orf141 400757 broad.mit.edu 36 1 67331567 67331567 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013674 exon7 c.G912A p.Q304Q . . . C1orf141 400757 broad.mit.edu 36 1 67333645 67333645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013674 exon6 c.C464T p.S155L . . . IL23R 149233 broad.mit.edu 36 1 67496909 67496909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144701 exon11 c.C1400T p.S467L . . . IL23R 149233 broad.mit.edu 36 1 67497071 67497071 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144701 exon11 c.A1562T p.N521I . . . IL12RB2 3595 broad.mit.edu 36 1 67610900 67610900 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001559 exon12 c.A1563C p.P521P . . . IL12RB2 3595 broad.mit.edu 36 1 67634278 67634278 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001559 exon16 c.C2507A p.S836Y . . . RPE65 6121 broad.mit.edu 36 1 68682809 68682809 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000329 exon5 c.T488G p.I163S . . . LRRC7 57554 broad.mit.edu 36 1 70224652 70224652 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020794 exon8 c.C812A p.S271Y . . . LRRC7 57554 broad.mit.edu 36 1 70274852 70274852 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020794 exon18 c.A2131G p.T711A . . . LRRC7 57554 broad.mit.edu 36 1 70276958 70276958 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020794 exon19 c.G2749A p.E917K . . . PTGER3 5733 broad.mit.edu 36 1 71285151 71285151 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198715 exon1 c.C698T p.A233V . . . ZRANB2 9406 broad.mit.edu 36 1 71305154 71305154 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203350 exon9 c.T822C p.Y274Y . . . LRRIQ3 127255 broad.mit.edu 36 1 74394111 74394111 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001105659 exon4 c.A601T p.N201Y . . . ACADM 34 broad.mit.edu 36 1 75971183 75971183 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000016 exon4 c.C274A p.P92T . . . MSH4 4438 broad.mit.edu 36 1 76035402 76035402 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002440 exon1 c.C144T p.V48V . . . MSH4 4438 broad.mit.edu 36 1 76045366 76045366 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002440 exon3 c.C540A p.N180K . . . MSH4 4438 broad.mit.edu 36 1 76116443 76116443 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002440 exon11 c.G1392T p.K464N . . . AK5 26289 broad.mit.edu 36 1 77655928 77655928 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012093 exon8 c.T921C p.D307D . . . AK5 26289 broad.mit.edu 36 1 77756951 77756951 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012093 exon11 c.G1184T p.R395I . . . ZZZ3 26009 broad.mit.edu 36 1 77814387 77814387 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015534 exon12 c.G2285A p.R762Q . . . USP33 23032 broad.mit.edu 36 1 77935719 77935719 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015017 exon25 c.A2700C p.E900D . . . USP33 23032 broad.mit.edu 36 1 77963952 77963952 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015017 exon12 c.G1312A p.A438T . . . NEXN 91624 broad.mit.edu 36 1 78163494 78163494 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144573 exon6 c.G481T p.A161S . . . GIPC2 54810 broad.mit.edu 36 1 78374002 78374002 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017655 exon6 c.G935A p.R312Q . . . PTGFR 5737 broad.mit.edu 36 1 78736154 78736154 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039585 exon3 c.G806T p.R269I . . . IFI44L 10964 broad.mit.edu 36 1 78873645 78873645 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006820 exon5 c.A759G p.G253G . . . ELTD1 64123 broad.mit.edu 36 1 79176088 79176088 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022159 exon6 c.C752T p.T251M . . . LPHN2 23266 broad.mit.edu 36 1 82188664 82188664 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012302 exon6 c.T1402C p.F468L . . . LPHN2 23266 broad.mit.edu 36 1 82229214 82229214 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012302 exon20 c.G4009A p.D1337N . . . TTLL7 79739 broad.mit.edu 36 1 84108249 84108249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024686 exon21 c.G2648T p.R883I . . . SSX2IP 117178 broad.mit.edu 36 1 84885792 84885792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166294 exon13 c.C1676T p.A559V . . . MCOLN2 255231 broad.mit.edu 36 1 85167836 85167836 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153259 exon13 c.C1657T p.R553W . . . MCOLN3 55283 broad.mit.edu 36 1 85267445 85267445 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018298 exon7 c.G764T p.R255I . . . MCOLN3 55283 broad.mit.edu 36 1 85272439 85272439 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018298 exon4 c.G480T p.Q160H . . . MCOLN3 55283 broad.mit.edu 36 1 85283453 85283453 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018298 exon2 c.C179A p.P60Q . . . WDR63 126820 broad.mit.edu 36 1 85368381 85368381 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145172 exon22 c.G2530A p.V844I . . . RERE 473 broad.mit.edu 36 1 8540079 8540079 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012102 exon6 c.C613T p.R205X . . . SYDE2 84144 broad.mit.edu 36 1 85421210 85421210 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032184 exon3 c.A1703G p.E568G . . . C1orf52 148423 broad.mit.edu 36 1 85490941 85490941 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198077 exon3 c.C508T p.R170C . . . BCL10 8915 broad.mit.edu 36 1 85509000 85509000 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003921 exon2 c.C235A p.L79M . . . ZNHIT6 54680 broad.mit.edu 36 1 85916993 85916993 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170670 exon8 c.C1031A p.S344Y . . . COL24A1 255631 broad.mit.edu 36 1 85968930 85968930 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152890 exon60 c.C5032T p.L1678F . . . ODF2L 57489 broad.mit.edu 36 1 86623054 86623054 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007022 exon4 c.A265C p.N89H . . . CLCA1 1179 broad.mit.edu 36 1 86731714 86731714 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001285 exon10 c.G1524A p.V508V . . . CLCA4 22802 broad.mit.edu 36 1 86809441 86809441 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012128 exon8 c.G1276A p.V426M . . . CCBL2 56267 broad.mit.edu 36 1 89221106 89221106 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019610 exon2 c.G992A p.R331Q . . . GBP4 115361 broad.mit.edu 36 1 89431645 89431645 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052941 exon4 c.T402C p.A134A . . . GBP5 115362 broad.mit.edu 36 1 89502182 89502182 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052942 exon9 c.G1187A p.R396Q . . . GBP6 163351 broad.mit.edu 36 1 89618609 89618610 + Missense_Mutation DNP CG TA TA novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198460 exon6 c.702_703TA . . . NA GBP6 163351 broad.mit.edu 36 1 89622339 89622339 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198460 exon10 c.G1568A p.R523H . . . ZNF326 284695 broad.mit.edu 36 1 90255495 90255495 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182976 exon8 c.C958T p.R320X . . . SLC2A5 6518 broad.mit.edu 36 1 9030311 9030311 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135585 exon4 c.C363T p.V121V . . . SLC2A5 6518 broad.mit.edu 36 1 9040231 9040231 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135585 exon3 c.G156T p.E52D . . . HFM1 164045 broad.mit.edu 36 1 91557469 91557469 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017975 exon24 c.G2649T p.K883N . . . HFM1 164045 broad.mit.edu 36 1 91617279 91617279 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017975 exon9 c.G1087T p.E363X . . . BRDT 676 broad.mit.edu 36 1 92219514 92219514 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207189 exon11 c.C1852T p.R618C . . . EPHX4 253152 broad.mit.edu 36 1 92301264 92301264 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173567 exon7 c.G922A p.A308T . . . RPAP2 79871 broad.mit.edu 36 1 92574556 92574556 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024813 exon10 c.C1603A p.L535I . . . EVI5 7813 broad.mit.edu 36 1 92864034 92864034 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005665 exon13 c.G1525T p.E509X . . . EVI5 7813 broad.mit.edu 36 1 92942774 92942774 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005665 exon3 c.G397T p.D133Y . . . MTF2 22823 broad.mit.edu 36 1 93348438 93348438 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007358 exon2 c.G69T p.K23N . . . CCDC18 343099 broad.mit.edu 36 1 93445383 93445383 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206886 exon9 c.A1403C p.K468T . . . CCDC18 343099 broad.mit.edu 36 1 93484251 93484251 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206886 exon22 c.G3337T p.E1113X . . . FNBP1L 54874 broad.mit.edu 36 1 93785071 93785071 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024948 exon11 c.G1185A p.E395E . . . DNTTIP2 30836 broad.mit.edu 36 1 94114635 94114635 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014597 exon2 c.C1444A p.L482M . . . DNTTIP2 30836 broad.mit.edu 36 1 94115235 94115235 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014597 exon2 c.G844A p.E282K . . . GCLM 2730 broad.mit.edu 36 1 94134919 94134919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002061 exon5 c.C383T p.A128V . . . ABCA4 24 broad.mit.edu 36 1 94252825 94252825 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000350 exon38 c.C5322A p.V1774V . . . ABCA4 24 broad.mit.edu 36 1 94318788 94318788 + Silent SNP G T T rs61753056 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000350 exon8 c.C933A p.T311T . . . ARHGAP29 9411 broad.mit.edu 36 1 94415785 94415785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004815 exon22 c.C2876T p.A959V . . . ARHGAP29 9411 broad.mit.edu 36 1 94439953 94439953 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004815 exon12 c.G1192T p.E398X . . . SLC44A3 126969 broad.mit.edu 36 1 95102925 95102925 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114106 exon11 c.C1277T p.S426F . . . PTBP2 58155 broad.mit.edu 36 1 97007854 97007854 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021190 exon4 c.T123C p.G41G . . . PTBP2 58155 broad.mit.edu 36 1 97015765 97015765 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021190 exon6 c.C469A p.Q157K . . . CLSTN1 22883 broad.mit.edu 36 1 9718553 9718553 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014944 exon11 c.G1681A p.E561K . . . DPYD 1806 broad.mit.edu 36 1 97833282 97833282 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000110 exon9 c.C879A p.I293I . . . PALMD 54873 broad.mit.edu 36 1 99905830 99905830 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017734 exon3 c.C171T p.S57S . . . RBP7 116362 broad.mit.edu 36 1 9998435 9998435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052960 exon4 c.C363A p.F121L . . . AGL 178 broad.mit.edu 36 1 100159805 100159805 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . VCAM1 7412 broad.mit.edu 36 1 100963042 100963042 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OLFM3 118427 broad.mit.edu 36 1 102063160 102063160 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COL11A1 1301 broad.mit.edu 36 1 103185112 103185112 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COL11A1 1301 broad.mit.edu 36 1 103252748 103252748 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . COL11A1 1301 broad.mit.edu 36 1 103264358 103264358 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NTNG1 22854 broad.mit.edu 36 1 107751815 107751815 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRPF38B 55119 broad.mit.edu 36 1 109040346 109040346 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . STXBP3 6814 broad.mit.edu 36 1 109138965 109138965 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GPSM2 29899 broad.mit.edu 36 1 109245925 109245925 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GPSM2 29899 broad.mit.edu 36 1 109247270 109247270 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SYPL2 284612 broad.mit.edu 36 1 109819859 109819859 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CSF1 1435 broad.mit.edu 36 1 110267304 110267304 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PTPN22 26191 broad.mit.edu 36 1 114177233 114177233 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DENND2C 163259 broad.mit.edu 36 1 114929740 114929740 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SYCP1 6847 broad.mit.edu 36 1 115289130 115289130 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CD101 9398 broad.mit.edu 36 1 117377997 117377997 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GDAP2 54834 broad.mit.edu 36 1 118250738 118250738 + Intron SNP G T T rs41276596 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . VPS13D 55187 broad.mit.edu 36 1 12315863 12315863 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VPS13D 55187 broad.mit.edu 36 1 12320957 12320957 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . POLR3C 10623 broad.mit.edu 36 1 144309981 144309981 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NBPF11 200030 broad.mit.edu 36 1 146713201 146713201 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAM63A 55793 broad.mit.edu 36 1 149241256 149241256 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GABPB2 126626 broad.mit.edu 36 1 149336940 149336940 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . THEM4 117145 broad.mit.edu 36 1 150116094 150116094 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VHLL 391104 broad.mit.edu 36 1 154535612 154535612 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NTRK1 4914 broad.mit.edu 36 1 155052244 155052244 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NTRK1 4914 broad.mit.edu 36 1 155111311 155111311 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARHGEF11 9826 broad.mit.edu 36 1 155172558 155172558 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OR10K1 391109 broad.mit.edu 36 1 156701964 156701964 + 5'Flank SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IFI16 3428 broad.mit.edu 36 1 157281720 157281720 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 1 157550082 157550082 + IGR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CASQ1 844 broad.mit.edu 36 1 158434036 158434036 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NUF2 83540 broad.mit.edu 36 1 161575896 161575896 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PBX1 5087 broad.mit.edu 36 1 163028349 163028349 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADCY10 55811 broad.mit.edu 36 1 166058996 166058996 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DCAF6 55827 broad.mit.edu 36 1 166239853 166239853 + Splice_Site SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KIFAP3 22920 broad.mit.edu 36 1 168275063 168275063 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FMO1 2326 broad.mit.edu 36 1 169517737 169517737 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SLC9A11 284525 broad.mit.edu 36 1 171769364 171769364 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP13A2 23400 broad.mit.edu 36 1 17203915 17203915 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GAS5 60674 broad.mit.edu 36 1 172101145 172101145 + RNA SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TNR 7143 broad.mit.edu 36 1 173595499 173595499 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIAA1614 57710 broad.mit.edu 36 1 179181349 179181349 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GLUL 2752 broad.mit.edu 36 1 180622013 180622013 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NMNAT2 23057 broad.mit.edu 36 1 181529562 181529562 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SMG7 9887 broad.mit.edu 36 1 181785515 181785515 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TPR 7175 broad.mit.edu 36 1 184554368 184554368 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C1orf27 54953 broad.mit.edu 36 1 184625342 184625342 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBR4 23352 broad.mit.edu 36 1 19360986 19360986 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CFHR3 10878 broad.mit.edu 36 1 195015538 195015538 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NEK7 140609 broad.mit.edu 36 1 196555157 196555157 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MIR181A1 406995 broad.mit.edu 36 1 197094867 197094867 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CAMSAP1L1 23271 broad.mit.edu 36 1 199067946 199067946 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CAMSAP1L1 23271 broad.mit.edu 36 1 199080521 199080521 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZC3H11A 9877 broad.mit.edu 36 1 202085788 202085788 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C1orf157 284573 broad.mit.edu 36 1 202276123 202276123 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PLA2G2C 391013 broad.mit.edu 36 1 20371867 20371867 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CR1 1378 broad.mit.edu 36 1 205861970 205861970 + Intron SNP T G G rs56004407 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RCOR3 55758 broad.mit.edu 36 1 209529136 209529136 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TATDN3 128387 broad.mit.edu 36 1 211037169 211037169 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PTPN14 5784 broad.mit.edu 36 1 212637872 212637872 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . USH2A 7399 broad.mit.edu 36 1 213983130 213983130 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . USH2A 7399 broad.mit.edu 36 1 214239028 214239028 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TGFB2 7042 broad.mit.edu 36 1 216675927 216675927 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EPRS 2058 broad.mit.edu 36 1 218258408 218258408 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IARS2 55699 broad.mit.edu 36 1 218376884 218376884 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HHIPL2 79802 broad.mit.edu 36 1 220762857 220762857 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TAF1A 9015 broad.mit.edu 36 1 220809469 220809469 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NUP133 55746 broad.mit.edu 36 1 227655014 227655014 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SIPA1L2 57568 broad.mit.edu 36 1 230617995 230617995 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EPHB2 2048 broad.mit.edu 36 1 23095479 23095479 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ERO1LB 56605 broad.mit.edu 36 1 234462766 234462766 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RYR2 6262 broad.mit.edu 36 1 235853801 235853801 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PLD5 200150 broad.mit.edu 36 1 240354389 240354389 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AKT3 10000 broad.mit.edu 36 1 241735260 241735260 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYOM3 127294 broad.mit.edu 36 1 24260130 24260130 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HNRNPU 3192 broad.mit.edu 36 1 243084366 243084366 + 3'UTR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AHCTF1 25909 broad.mit.edu 36 1 245085758 245085758 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GRHL3 57822 broad.mit.edu 36 1 24553450 24553450 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OR2M5 127059 broad.mit.edu 36 1 246375072 246375072 + 5'Flank SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SH3BP5L 80851 broad.mit.edu 36 1 247085568 247085568 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LCK 3932 broad.mit.edu 36 1 32518186 32518186 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AK2 204 broad.mit.edu 36 1 33259776 33259776 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZMYM6 9204 broad.mit.edu 36 1 35250770 35250770 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZMYM6 9204 broad.mit.edu 36 1 35257534 35257534 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C1orf216 127703 broad.mit.edu 36 1 35959176 35959176 + 5'Flank SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KIAA0562 9731 broad.mit.edu 36 1 3732171 3732171 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDCA8 55143 broad.mit.edu 36 1 37946573 37946573 + Intron SNP C A A rs35705618 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COL9A2 1298 broad.mit.edu 36 1 40543966 40543966 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZMYND12 84217 broad.mit.edu 36 1 42673524 42673524 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TIE1 7075 broad.mit.edu 36 1 43550556 43550556 + Intron SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KDM4A 9682 broad.mit.edu 36 1 43904010 43904010 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MAST2 23139 broad.mit.edu 36 1 46246546 46246546 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POMGNT1 55624 broad.mit.edu 36 1 46427216 46427216 + 3'UTR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CYP4Z1 199974 broad.mit.edu 36 1 47320592 47320592 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OSBPL9 114883 broad.mit.edu 36 1 52022167 52022167 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NRD1 4898 broad.mit.edu 36 1 52029261 52029261 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MRPL37 51253 broad.mit.edu 36 1 54454608 54454608 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYSM1 114803 broad.mit.edu 36 1 58923408 58923408 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CACHD1 57685 broad.mit.edu 36 1 64904445 64904445 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LEPR 3953 broad.mit.edu 36 1 65808743 65808743 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LEPR 3953 broad.mit.edu 36 1 65809078 65809078 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNAJC11 55735 broad.mit.edu 36 1 6621019 6621019 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SGIP1 84251 broad.mit.edu 36 1 66932746 66932746 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LRRC7 57554 broad.mit.edu 36 1 70256978 70256978 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TNNI3K 51086 broad.mit.edu 36 1 74474362 74474362 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TNNI3K 51086 broad.mit.edu 36 1 74606248 74606248 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LPHN2 23266 broad.mit.edu 36 1 82194337 82194337 + Intron SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SH3GLB1 51100 broad.mit.edu 36 1 86966721 86966721 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GBP5 115362 broad.mit.edu 36 1 89500680 89500680 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GBP6 163351 broad.mit.edu 36 1 89621905 89621905 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BRDT 676 broad.mit.edu 36 1 92218969 92218969 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BRDT 676 broad.mit.edu 36 1 92219405 92219405 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MKKS 8195 broad.mit.edu 36 20 10341532 10341532 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018848 exon3 c.G631T p.D211Y . . . JAG1 182 broad.mit.edu 36 20 10569476 10569476 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000214 exon25 c.G3154A p.V1052I . . . ISM1 140862 broad.mit.edu 36 20 13208470 13208470 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080826 exon3 c.C568A p.L190I . . . SEL1L2 80343 broad.mit.edu 36 20 13795451 13795451 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025229 exon15 c.T1301G p.F434C . . . SEL1L2 80343 broad.mit.edu 36 20 13842461 13842461 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025229 exon5 c.C516A p.S172S . . . MACROD2 140733 broad.mit.edu 36 20 13930984 13930984 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080676 exon2 c.G97T p.D33Y . . . FLRT3 23767 broad.mit.edu 36 20 14254584 14254584 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198391 exon3 c.A1569C p.K523N . . . FLRT3 23767 broad.mit.edu 36 20 14255246 14255246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198391 exon3 c.C907T p.R303C . . . SIRPD 128646 broad.mit.edu 36 20 1480601 1480601 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178460 exon2 c.G157A p.V53I . . . SIRPG 55423 broad.mit.edu 36 20 1565063 1565063 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039508 exon3 c.C519A p.F173L . . . MACROD2 140733 broad.mit.edu 36 20 15861977 15861977 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033087 exon7 c.G127T p.D43Y . . . DSTN 11034 broad.mit.edu 36 20 17529461 17529461 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006870 exon2 c.G82T p.E28X . . . DSTN 11034 broad.mit.edu 36 20 17529541 17529541 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006870 exon2 c.G162T p.E54D . . . RRBP1 6238 broad.mit.edu 36 20 17556210 17556210 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042576 exon11 c.G1568T p.R523I . . . RBBP9 10741 broad.mit.edu 36 20 18418507 18418507 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006606 exon5 c.A462G p.E154E . . . PDYN 5173 broad.mit.edu 36 20 1909213 1909213 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190899 exon3 c.G521A p.R174H . . . C20orf26 26074 broad.mit.edu 36 20 20027416 20027416 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015585 exon8 c.G817A p.V273I . . . RALGAPA2 57186 broad.mit.edu 36 20 20340720 20340720 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020343 exon38 c.C5568T p.F1856F . . . XRN2 22803 broad.mit.edu 36 20 21285284 21285284 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012255 exon23 c.G2179T p.E727X . . . TGM3 7053 broad.mit.edu 36 20 2238958 2238958 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003245 exon3 c.G316A p.A106T . . . TGM3 7053 broad.mit.edu 36 20 2269213 2269213 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003245 exon13 c.G2068A p.D690N . . . GZF1 64412 broad.mit.edu 36 20 23294071 23294071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022482 exon1 c.G1051A p.D351N . . . CSTL1 128817 broad.mit.edu 36 20 23372620 23372620 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138283 exon3 c.A269C p.K90T . . . CST11 140880 broad.mit.edu 36 20 23380486 23380486 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130794 exon2 c.G300A p.T100T . . . CST3 1471 broad.mit.edu 36 20 23562559 23562559 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000099 exon3 c.C435T p.D145D . . . ABHD12 26090 broad.mit.edu 36 20 25252034 25252034 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015600 exon3 c.C349A p.P117T . . . NINL 22981 broad.mit.edu 36 20 25405555 25405555 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025176 exon17 c.C2372T p.A791V . . . CPXM1 56265 broad.mit.edu 36 20 2724058 2724058 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184699 exon12 c.G1503T p.M501I . . . CPXM1 56265 broad.mit.edu 36 20 2725708 2725708 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184699 exon7 c.T865C p.S289P . . . DEFB119 245932 broad.mit.edu 36 20 29440625 29440625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153323 exon2 c.G131A p.R44Q . . . TPX2 22974 broad.mit.edu 36 20 29830333 29830333 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012112 exon10 c.G939T p.K313N . . . TPX2 22974 broad.mit.edu 36 20 29830416 29830416 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012112 exon10 c.G1022T p.R341I . . . PDRG1 81572 broad.mit.edu 36 20 30000323 30000323 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030815 exon3 c.A187G p.N63D . . . C20orf160 140706 broad.mit.edu 36 20 30074177 30074177 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080625 exon6 c.C987T p.Y329Y . . . KIF3B 9371 broad.mit.edu 36 20 30362507 30362507 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004798 exon2 c.G1266T p.E422D . . . ASXL1 171023 broad.mit.edu 36 20 30417914 30417914 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164603 exon2 c.G124T p.G42X . . . FASTKD5 60493 broad.mit.edu 36 20 3075480 3075480 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021826 exon2 c.G2237A p.R746Q . . . DNMT3B 1789 broad.mit.edu 36 20 30852337 30852337 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175848 exon17 c.C1881T p.G627G . . . BPIL3 128859 broad.mit.edu 36 20 31087084 31087084 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174897 exon6 c.T522C p.C174C . . . C20orf71 128861 broad.mit.edu 36 20 31276694 31276694 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178466 exon4 c.C516A p.V172V . . . C20orf114 92747 broad.mit.edu 36 20 31354396 31354396 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033197 exon11 c.T995A p.L332Q . . . CDK5RAP1 51654 broad.mit.edu 36 20 31431119 31431119 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016082 exon8 c.A646C p.S216R . . . SLC4A11 83959 broad.mit.edu 36 20 3163509 3163509 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174089 exon3 c.C120T p.F40F . . . CBFA2T2 9139 broad.mit.edu 36 20 31681247 31681247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032999 exon8 c.G1094A p.R365H . . . C20orf194 25943 broad.mit.edu 36 20 3181310 3181310 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009984 exon37 c.G3442T p.D1148Y . . . C20orf194 25943 broad.mit.edu 36 20 3182400 3182400 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009984 exon36 c.C3393A p.F1131L . . . EIF2S2 8894 broad.mit.edu 36 20 32156910 32156910 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003908 exon2 c.G118T p.E40X . . . AHCY 191 broad.mit.edu 36 20 32336980 32336980 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161766 exon9 c.A1010G p.Q337R . . . C20orf194 25943 broad.mit.edu 36 20 3243726 3243726 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009984 exon20 c.A1632T p.E544D . . . NCOA6 23054 broad.mit.edu 36 20 32792454 32792454 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014071 exon11 c.C5267A p.S1756Y . . . NCOA6 23054 broad.mit.edu 36 20 32794095 32794095 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014071 exon11 c.C3626T p.P1209L . . . GGT7 2686 broad.mit.edu 36 20 32914372 32914372 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178026 exon3 c.G463A p.E155K . . . GSS 2937 broad.mit.edu 36 20 32980389 32980389 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000178 exon13 c.A1328C p.K443T . . . C20orf194 25943 broad.mit.edu 36 20 3302717 3302717 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009984 exon6 c.G590A p.G197E . . . MYH7B 57644 broad.mit.edu 36 20 33029513 33029513 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020884 exon5 c.G170A p.R57H . . . UQCC 55245 broad.mit.edu 36 20 33435285 33435285 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199487 exon3 c.G195A p.Q65Q . . . CEP250 11190 broad.mit.edu 36 20 33517313 33517313 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon7 c.G362A p.R121Q . . . CEP250 11190 broad.mit.edu 36 20 33547884 33547884 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon25 c.C3232T p.R1078X . . . CEP250 11190 broad.mit.edu 36 20 33553732 33553732 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon30 c.C4121A p.A1374D . . . CEP250 11190 broad.mit.edu 36 20 33554942 33554942 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007186 exon30 c.G5331T p.E1777D . . . CPNE1 8904 broad.mit.edu 36 20 33678617 33678617 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152927 exon15 c.C1235T p.S412L . . . CPNE1 8904 broad.mit.edu 36 20 33678702 33678702 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152927 exon15 c.C1150T p.R384C . . . RBM39 9584 broad.mit.edu 36 20 33783454 33783454 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004902 exon4 c.G119A p.S40N . . . C20orf152 140894 broad.mit.edu 36 20 34075021 34075021 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080834 exon11 c.G1341A p.R447R . . . C20orf132 140699 broad.mit.edu 36 20 35209717 35209717 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_213632 exon8 c.C980T p.A327V . . . ATRN 8455 broad.mit.edu 36 20 3567484 3567484 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139321 exon27 c.C3952T p.R1318X . . . RALGAPB 57148 broad.mit.edu 36 20 36597214 36597214 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020336 exon16 c.G2329T p.D777Y . . . TBC1D20 128637 broad.mit.edu 36 20 367812 367812 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144628 exon7 c.T896G p.F299C . . . SLC32A1 140679 broad.mit.edu 36 20 36786856 36786856 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080552 exon1 c.C75T p.S25S . . . PPP1R16B 26051 broad.mit.edu 36 20 36964747 36964747 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172735 exon6 c.C594T p.N198N . . . PPP1R16B 26051 broad.mit.edu 36 20 36968073 36968073 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015568 exon7 c.C744T p.L248L . . . FAM83D 81610 broad.mit.edu 36 20 37013613 37013613 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030919 exon4 c.G884A p.G295D . . . FAM83D 81610 broad.mit.edu 36 20 37014224 37014224 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030919 exon4 c.G1495A p.V499I . . . DHX35 60625 broad.mit.edu 36 20 37056936 37056936 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190809 exon7 c.A548G p.D183G . . . TOP1 7150 broad.mit.edu 36 20 39138280 39138280 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003286 exon4 c.G211T p.D71Y . . . LPIN3 64900 broad.mit.edu 36 20 39414704 39414704 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022896 exon10 c.A1408T p.N470Y . . . CHD6 84181 broad.mit.edu 36 20 39483221 39483221 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032221 exon31 c.T5468G p.F1823C . . . PTPRT 11122 broad.mit.edu 36 20 40164196 40164196 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133170 exon27 c.C3753A p.I1251I . . . SRSF6 6431 broad.mit.edu 36 20 41522271 41522271 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006275 exon4 c.G566A p.R189Q . . . CSNK2A1 1457 broad.mit.edu 36 20 416211 416211 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001895 exon11 c.G833A p.R278Q . . . MYBL2 4605 broad.mit.edu 36 20 41764786 41764786 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002466 exon8 c.C1194T p.V398V . . . GDAP1L1 78997 broad.mit.edu 36 20 42341221 42341221 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024034 exon6 c.C971T p.S324L . . . HNF4A 3172 broad.mit.edu 36 20 42481881 42481881 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030003 exon7 c.C777T p.I259I . . . YWHAB 7529 broad.mit.edu 36 20 42963709 42963709 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139323 exon2 c.G121A p.E41K . . . TOMM34 10953 broad.mit.edu 36 20 43005197 43005197 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006809 exon7 c.G897T p.K299N . . . SEMG2 6407 broad.mit.edu 36 20 43283965 43283965 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003008 exon2 c.C278T p.A93V . . . RBPJL 11317 broad.mit.edu 36 20 43373646 43373646 + Missense_Mutation SNP C A A rs2743328 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014276 exon4 c.C261A p.F87L . . . WFDC6 140870 broad.mit.edu 36 20 43600119 43600119 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080827 exon2 c.C120T p.C40C . . . WFDC9 259240 broad.mit.edu 36 20 43670192 43670192 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147198 exon5 c.G241T p.E81X . . . WFDC10A 140832 broad.mit.edu 36 20 43691909 43691909 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080753 exon1 c.C43T p.L15L . . . ZSWIM3 140831 broad.mit.edu 36 20 43938864 43938864 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080752 exon2 c.G260T p.R87I . . . ZSWIM1 90204 broad.mit.edu 36 20 43945136 43945136 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080603 exon2 c.C498A p.V166V . . . C20orf165 128497 broad.mit.edu 36 20 43948597 43948597 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080608 exon2 c.C650A p.S217Y . . . CTSA 5476 broad.mit.edu 36 20 43953764 43953764 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000308 exon2 c.C204A p.Y68X . . . PLTP 5360 broad.mit.edu 36 20 43971586 43971586 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006227 exon5 c.A461G p.H154R . . . SLC12A5 57468 broad.mit.edu 36 20 44098825 44098825 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020708 exon5 c.G465A p.T155T . . . SLC12A5 57468 broad.mit.edu 36 20 44113869 44113869 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020708 exon18 c.G2330A p.R777H . . . ELMO2 63916 broad.mit.edu 36 20 44435467 44435467 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182764 exon15 c.C1394T p.A465V . . . ZNF334 55713 broad.mit.edu 36 20 44564279 44564279 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018102 exon5 c.G1106T p.R369I . . . ZMYND8 23613 broad.mit.edu 36 20 45308322 45308322 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012408 exon14 c.G2121T p.K707N . . . PREX1 57580 broad.mit.edu 36 20 46700965 46700965 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020820 exon23 c.C2691T p.F897F . . . PREX1 57580 broad.mit.edu 36 20 46708130 46708130 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020820 exon17 c.A1925C p.K642T . . . PREX1 57580 broad.mit.edu 36 20 46750767 46750767 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020820 exon7 c.C848T p.A283V . . . CSE1L 1434 broad.mit.edu 36 20 47122544 47122544 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001316 exon10 c.A969C p.S323S . . . ZNFX1 57169 broad.mit.edu 36 20 47298252 47298252 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021035 exon14 c.A4716G p.Q1572Q . . . ZNFX1 57169 broad.mit.edu 36 20 47313389 47313389 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021035 exon6 c.T2190G p.H730Q . . . ZNFX1 57169 broad.mit.edu 36 20 47314747 47314747 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021035 exon5 c.C2064A p.I688I . . . KCNB1 3745 broad.mit.edu 36 20 47423792 47423792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004975 exon2 c.C1712T p.P571L . . . PTGIS 5740 broad.mit.edu 36 20 47563044 47563044 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000961 exon8 c.G1186T p.E396X . . . SLC9A8 23315 broad.mit.edu 36 20 47936785 47936785 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015266 exon15 c.C1581T p.F527F . . . SLC9A8 23315 broad.mit.edu 36 20 47937793 47937793 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015266 exon16 c.C1659A p.I553I . . . SPATA2 9825 broad.mit.edu 36 20 47956731 47956731 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006038 exon3 c.G395A p.R132Q . . . TMEM189-UBE2V1 387522 broad.mit.edu 36 20 48146666 48146666 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021988 exon2 c.G190A p.E64K . . . TMEM189-UBE2V1 387522 broad.mit.edu 36 20 48179577 48179577 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199129 exon4 c.G391A p.D131N . . . ADNP 23394 broad.mit.edu 36 20 48941562 48941562 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015339 exon5 c.C3096A p.S1032S . . . KCNG1 3755 broad.mit.edu 36 20 49059739 49059739 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002237 exon2 c.C544T p.R182W . . . ATP9A 10079 broad.mit.edu 36 20 49744008 49744008 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006045 exon7 c.G588A p.T196T . . . SALL4 57167 broad.mit.edu 36 20 49841096 49841096 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020436 exon2 c.T1333C p.F445L . . . ZFP64 55734 broad.mit.edu 36 20 50215960 50215960 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199426 exon3 c.G292T p.E98X . . . PCNA 5111 broad.mit.edu 36 20 5047478 5047478 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002592 exon3 c.G256T p.D86Y . . . CDS2 8760 broad.mit.edu 36 20 5114428 5114428 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003818 exon9 c.G784T p.G262C . . . TSHZ2 128553 broad.mit.edu 36 20 51305189 51305189 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193421 exon2 c.C1776A p.A592A . . . ZNF217 7764 broad.mit.edu 36 20 51621746 51621746 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006526 exon4 c.A3091C p.N1031H . . . MC3R 4159 broad.mit.edu 36 20 54257631 54257631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019888 exon1 c.G325A p.E109K . . . CSTF1 1477 broad.mit.edu 36 20 54406109 54406109 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033521 exon4 c.C450A p.V150V . . . GPCPD1 56261 broad.mit.edu 36 20 5514888 5514888 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019593 exon5 c.G259T p.V87F . . . CTCFL 140690 broad.mit.edu 36 20 55524183 55524183 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080618 exon6 c.G1173A p.T391T . . . ZBP1 81030 broad.mit.edu 36 20 55623427 55623427 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160417 exon4 c.C424T p.R142X . . . RAB22A 57403 broad.mit.edu 36 20 56361762 56361762 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020673 exon4 c.C226T p.R76X . . . RAB22A 57403 broad.mit.edu 36 20 56361992 56361992 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020673 exon5 c.C369T p.I123I . . . APCDD1L 164284 broad.mit.edu 36 20 56469710 56469710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153360 exon4 c.G1048A p.E350K . . . ZNF831 128611 broad.mit.edu 36 20 57202316 57202316 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178457 exon1 c.G2847T p.E949D . . . ZNF831 128611 broad.mit.edu 36 20 57262418 57262418 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178457 exon5 c.C4259A p.S1420Y . . . PHACTR3 116154 broad.mit.edu 36 20 57775689 57775689 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199505 exon5 c.C586T p.P196S . . . PHACTR3 116154 broad.mit.edu 36 20 57782755 57782755 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199505 exon7 c.C980T p.T327M . . . SYCP2 10388 broad.mit.edu 36 20 57885906 57885906 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014258 exon32 c.G3079T p.D1027Y . . . C20orf177 63939 broad.mit.edu 36 20 57952939 57952939 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190826 exon5 c.C546T p.I182I . . . C20orf197 284756 broad.mit.edu 36 20 58079228 58079228 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173644 exon4 c.G251A p.G84E . . . CHGB 1114 broad.mit.edu 36 20 5845562 5845562 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001819 exon3 c.A187T p.T63S . . . CHGB 1114 broad.mit.edu 36 20 5852743 5852743 + Silent SNP C T T rs56291961 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001819 exon4 c.C1953T p.D651D . . . CDH4 1002 broad.mit.edu 36 20 59931929 59931929 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001794 exon10 c.C1400A p.A467D . . . DIDO1 11083 broad.mit.edu 36 20 60983443 60983443 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193369 exon16 c.C4310T p.A1437V . . . DIDO1 11083 broad.mit.edu 36 20 60992768 60992768 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193369 exon15 c.T3530G p.F1177C . . . DIDO1 11083 broad.mit.edu 36 20 60992905 60992905 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193369 exon15 c.C3393T p.V1131V . . . DIDO1 11083 broad.mit.edu 36 20 61007860 61007860 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193369 exon6 c.C1412A p.A471D . . . ZBTB46 140685 broad.mit.edu 36 20 61892249 61892249 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025224 exon2 c.C306A p.V102V . . . HAO1 54363 broad.mit.edu 36 20 7863205 7863205 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017545 exon2 c.G215T p.S72I . . . TMX4 56255 broad.mit.edu 36 20 7911216 7911216 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021156 exon8 c.G732A p.A244A . . . PLCB1 23236 broad.mit.edu 36 20 8657737 8657737 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015192 exon18 c.A1804G p.T602A . . . DEFB127 140850 broad.mit.edu 36 20 87570 87570 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139074 exon2 c.C205T p.P69S . . . PLCB4 5332 broad.mit.edu 36 20 9364235 9364235 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000933 exon25 c.G2517T p.K839N . . . C20orf103 24141 broad.mit.edu 36 20 9446737 9446737 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199897 exon4 c.G394A p.A132T . . . PAK7 57144 broad.mit.edu 36 20 9508824 9508824 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177990 exon4 c.C958T p.R320C . . . ESF1 51575 broad.mit.edu 36 20 13704924 13704924 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C20orf12 55184 broad.mit.edu 36 20 18362295 18362295 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SEC23B 10483 broad.mit.edu 36 20 18479827 18479827 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SUN5 140732 broad.mit.edu 36 20 31035252 31035252 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SUN5 140732 broad.mit.edu 36 20 31041171 31041171 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C20orf194 25943 broad.mit.edu 36 20 3259286 3259286 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RALGAPB 57148 broad.mit.edu 36 20 36583764 36583764 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IFT52 51098 broad.mit.edu 36 20 41686107 41686107 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . WFDC8 90199 broad.mit.edu 36 20 43617749 43617749 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ELMO2 63916 broad.mit.edu 36 20 44437421 44437421 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARFGEF2 10564 broad.mit.edu 36 20 47081986 47081986 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF217 7764 broad.mit.edu 36 20 51628274 51628274 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPCPD1 56261 broad.mit.edu 36 20 5532998 5532998 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAE1 8480 broad.mit.edu 36 20 55362599 55362599 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SYCP2 10388 broad.mit.edu 36 20 57922484 57922484 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SYCP2 10388 broad.mit.edu 36 20 57923604 57923604 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . POTED 317754 broad.mit.edu 36 21 13904830 13904830 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174981 exon1 c.G410A p.R137Q . . . POTED 317754 broad.mit.edu 36 21 13922606 13922606 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174981 exon7 c.T1159C p.S387P . . . POTED 317754 broad.mit.edu 36 21 13935567 13935567 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174981 exon11 c.C1564A p.L522I . . . NRIP1 8204 broad.mit.edu 36 21 15260916 15260916 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003489 exon4 c.C1469A p.S490Y . . . NRIP1 8204 broad.mit.edu 36 21 15262063 15262063 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003489 exon4 c.T322G p.L108V . . . USP25 29761 broad.mit.edu 36 21 16057092 16057092 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013396 exon2 c.G57A p.T19T . . . C21orf91 54149 broad.mit.edu 36 21 18089452 18089452 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001100420 exon4 c.C671T p.S224L . . . TMPRSS15 5651 broad.mit.edu 36 21 18666452 18666452 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002772 exon6 c.T593C p.I198T . . . TMPRSS15 5651 broad.mit.edu 36 21 18677853 18677853 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002772 exon4 c.T458C p.V153A . . . TMPRSS15 5651 broad.mit.edu 36 21 18692123 18692123 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002772 exon3 c.C288A p.I96I . . . NCAM2 4685 broad.mit.edu 36 21 21629765 21629765 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004540 exon7 c.G807A p.R269R . . . NCAM2 4685 broad.mit.edu 36 21 21668067 21668067 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004540 exon9 c.G1058T p.R353L . . . NCAM2 4685 broad.mit.edu 36 21 21760909 21760909 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004540 exon13 c.T1766C p.L589S . . . NCAM2 4685 broad.mit.edu 36 21 21803046 21803046 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004540 exon16 c.C2081T p.T694M . . . GABPA 2551 broad.mit.edu 36 21 26039499 26039499 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197297 exon3 c.C185A p.S62Y . . . GABPA 2551 broad.mit.edu 36 21 26058959 26058959 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197297 exon9 c.C1126T p.R376C . . . APP 351 broad.mit.edu 36 21 26249863 26249863 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201414 exon10 c.C1311T p.F437F . . . ADAMTS5 11096 broad.mit.edu 36 21 27260114 27260114 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007038 exon1 c.C468T p.F156F . . . RWDD2B 10069 broad.mit.edu 36 21 29302676 29302676 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016940 exon2 c.G205T p.D69Y . . . CCT8 10694 broad.mit.edu 36 21 29359295 29359295 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006585 exon7 c.C627T p.G209G . . . BACH1 571 broad.mit.edu 36 21 29620556 29620556 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001186 exon3 c.G540T p.Q180H . . . GRIK1 2897 broad.mit.edu 36 21 29881742 29881742 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175611 exon11 c.C1563T p.Y521Y . . . GRIK1 2897 broad.mit.edu 36 21 29945336 29945336 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175611 exon6 c.G927A p.E309E . . . GRIK1 2897 broad.mit.edu 36 21 29988224 29988224 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175611 exon2 c.C148T p.P50S . . . CLDN17 26285 broad.mit.edu 36 21 30460469 30460469 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012131 exon1 c.G338T p.R113M . . . CLDN8 9073 broad.mit.edu 36 21 30509464 30509464 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199328 exon1 c.C651T p.S217S . . . KRTAP26-1 388818 broad.mit.edu 36 21 30613919 30613919 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203405 exon1 c.C306A p.F102L . . . KRTAP19-1 337882 broad.mit.edu 36 21 30774250 30774250 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181607 exon1 c.C258A p.F86L . . . KRTAP19-5 337972 broad.mit.edu 36 21 30796153 30796153 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181611 exon1 c.G127T p.G43C . . . TIAM1 7074 broad.mit.edu 36 21 31448565 31448565 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon18 c.C3042A p.P1014P . . . TIAM1 7074 broad.mit.edu 36 21 31511850 31511850 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon10 c.C2032T p.R678C TIAM1,large_intestine,colon,Substitution - Missense,0 . . TIAM1 7074 broad.mit.edu 36 21 31519917 31519917 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon8 c.A1805G p.D602G . . . TIAM1 7074 broad.mit.edu 36 21 31560589 31560589 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon5 c.G571T p.E191X . . . TIAM1 7074 broad.mit.edu 36 21 31561114 31561114 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003253 exon5 c.G46T p.E16X . . . SFRS15 57466 broad.mit.edu 36 21 31987651 31987651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145444 exon11 c.G1295A p.R432Q . . . HUNK 30811 broad.mit.edu 36 21 32293033 32293033 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014586 exon11 c.C1810T p.P604S . . . SYNJ1 8867 broad.mit.edu 36 21 32944517 32944517 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003895 exon23 c.G3002A p.R1001Q . . . GCFC1 94104 broad.mit.edu 36 21 33032419 33032419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016631 exon16 c.G2417A p.R806Q . . . GCFC1 94104 broad.mit.edu 36 21 33037894 33037894 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016631 exon14 c.G2233T p.D745Y . . . GCFC1 94104 broad.mit.edu 36 21 33042801 33042801 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016631 exon11 c.G1803T p.Q601H . . . IFNAR1 3454 broad.mit.edu 36 21 33649637 33649637 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000629 exon11 c.C1586T p.S529F . . . DNAJC28 54943 broad.mit.edu 36 21 33782526 33782526 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017833 exon2 c.G1045T p.E349X . . . DNAJC28 54943 broad.mit.edu 36 21 33782981 33782981 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017833 exon2 c.C590T p.T197M . . . DNAJC28 54943 broad.mit.edu 36 21 33783420 33783420 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017833 exon2 c.G151T p.E51X . . . GART 2618 broad.mit.edu 36 21 33823074 33823074 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136006 exon8 c.C763A p.L255I . . . SON 6651 broad.mit.edu 36 21 33847034 33847034 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032195 exon3 c.G3627A p.S1209S . . . DONSON 29980 broad.mit.edu 36 21 33875508 33875508 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017613 exon8 c.T1320G p.A440A . . . ITSN1 6453 broad.mit.edu 36 21 34066441 34066441 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001132 exon12 c.C1249T p.R417W . . . ATP5O 539 broad.mit.edu 36 21 34198122 34198122 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001697 exon6 c.A515C p.K172T . . . KCNE1 3753 broad.mit.edu 36 21 34743498 34743498 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127668 exon3 c.G305A p.S102N . . . RCAN1 1827 broad.mit.edu 36 21 34820895 34820895 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203418 exon1 c.A23G p.Y8C . . . TTC3 7267 broad.mit.edu 36 21 37389601 37389601 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003316 exon9 c.G769T p.A257S . . . TTC3 7267 broad.mit.edu 36 21 37438718 37438718 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003316 exon21 c.T1796C p.F599S . . . TTC3 7267 broad.mit.edu 36 21 37459810 37459810 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003316 exon33 c.A3424G p.T1142A . . . TTC3 7267 broad.mit.edu 36 21 37476991 37476991 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003316 exon36 c.G4663A p.E1555K . . . TTC3 7267 broad.mit.edu 36 21 37495662 37495662 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003316 exon46 c.C5995T p.R1999C . . . DYRK1A 1859 broad.mit.edu 36 21 37806087 37806087 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001396 exon11 c.C1675T p.R559C . . . LCA5L 150082 broad.mit.edu 36 21 39700016 39700016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152505 exon10 c.C1675T p.L559F . . . SH3BGR 6450 broad.mit.edu 36 21 39745890 39745890 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007341 exon1 c.G187A p.E63K . . . B3GALT5 10317 broad.mit.edu 36 21 39954805 39954805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033171 exon4 c.C449T p.A150V . . . DSCAM 1826 broad.mit.edu 36 21 40349535 40349535 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001389 exon29 c.G5022A p.T1674T . . . DSCAM 1826 broad.mit.edu 36 21 40482993 40482993 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001389 exon12 c.C2399T p.T800M . . . DSCAM 1826 broad.mit.edu 36 21 40632051 40632051 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001389 exon8 c.C1630T p.L544F . . . PLAC4 191585 broad.mit.edu 36 21 41473410 41473410 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182832 exon1 c.C16T p.R6C . . . BACE2 25825 broad.mit.edu 36 21 41537197 41537197 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138991 exon5 c.T772G p.L258V . . . MX2 4600 broad.mit.edu 36 21 41671654 41671654 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002463 exon3 c.C318A p.S106S . . . MX1 4599 broad.mit.edu 36 21 41729783 41729783 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144925 exon8 c.C255T p.S85S . . . PRDM15 63977 broad.mit.edu 36 21 42095977 42095977 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022115 exon30 c.C4005T p.G1335G . . . PRDM15 63977 broad.mit.edu 36 21 42119471 42119471 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022115 exon20 c.C2641T p.R881X . . . PRDM15 63977 broad.mit.edu 36 21 42150414 42150414 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022115 exon11 c.C1323T p.F441F . . . ZNF295 49854 broad.mit.edu 36 21 42286665 42286665 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098403 exon3 c.A609C p.L203F . . . ABCG1 9619 broad.mit.edu 36 21 42589352 42589352 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207174 exon15 c.C1815T p.F605F . . . UBASH3A 53347 broad.mit.edu 36 21 42740361 42740361 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001895 exon14 c.C1860A p.I620I . . . RSPH1 89765 broad.mit.edu 36 21 42775821 42775821 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080860 exon6 c.G568T p.D190Y . . . RSPH1 89765 broad.mit.edu 36 21 42786180 42786180 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080860 exon2 c.G133A p.E45K . . . RRP1B 23076 broad.mit.edu 36 21 43918951 43918951 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C T Unknown Valid Germline Phase_I Capture Illumina Illumina HiSeq NM_015056 exon5 c.C364T p.R122C . . . RRP1B 23076 broad.mit.edu 36 21 43931835 43931835 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015056 exon13 c.C1152A p.V384V . . . TRPM2 7226 broad.mit.edu 36 21 44635292 44635292 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003307 exon10 c.G1396T p.D466Y . . . KRTAP10-4 386672 broad.mit.edu 36 21 44818095 44818095 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198687 exon1 c.G32A p.S11N . . . KRTAP10-7 386675 broad.mit.edu 36 21 44845321 44845321 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198689 exon2 c.C357T p.C119C . . . KRTAP10-11 386678 broad.mit.edu 36 21 44891295 44891295 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198692 exon1 c.T492G p.D164E . . . POFUT2 23275 broad.mit.edu 36 21 45522509 45522509 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133635 exon5 c.C642T p.S214S . . . PCBP3 54039 broad.mit.edu 36 21 46145437 46145437 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020528 exon5 c.C321T p.I107I . . . PCNT 5116 broad.mit.edu 36 21 46591816 46591816 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006031 exon6 c.T994C p.L332L . . . DIP2A 23181 broad.mit.edu 36 21 46781826 46781826 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146114 exon13 c.G1555A p.A519T . . . TPTE 7179 broad.mit.edu 36 21 9938248 9938248 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199261 exon20 c.G1269A p.S423S . . . TPTE 7179 broad.mit.edu 36 21 9941980 9941980 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199261 exon19 c.T1145G p.F382C . . . TPTE 7179 broad.mit.edu 36 21 9956825 9956825 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199261 exon15 c.G839A p.R280Q . . . CXADR 1525 broad.mit.edu 36 21 17845937 17845937 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TIAM1 7074 broad.mit.edu 36 21 31424512 31424512 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C21orf63 59271 broad.mit.edu 36 21 32762031 32762031 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IFNGR2 3460 broad.mit.edu 36 21 33715869 33715869 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SIM2 6493 broad.mit.edu 36 21 37037734 37037734 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DSCAM 1826 broad.mit.edu 36 21 40307195 40307195 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MX1 4599 broad.mit.edu 36 21 41729630 41729630 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KRTAP12-2 353323 broad.mit.edu 36 21 44910790 44910790 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TPTE 7179 broad.mit.edu 36 21 9993224 9993224 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IL17RA 23765 broad.mit.edu 36 22 15963029 15963029 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014339 exon7 c.G599A p.G200D . . . CECR2 27443 broad.mit.edu 36 22 16400202 16400202 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031413 exon13 c.C1533T p.F511F . . . CECR2 27443 broad.mit.edu 36 22 16400356 16400356 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031413 exon13 c.C1687T p.P563S . . . ATP6V1E1 529 broad.mit.edu 36 22 16475984 16475984 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001696 exon3 c.A202G p.K68E . . . PEX26 55670 broad.mit.edu 36 22 16950773 16950773 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017929 exon6 c.G850A p.A284T . . . TSSK2 23617 broad.mit.edu 36 22 17499811 17499811 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053006 exon1 c.A899G p.D300G . . . CLTCL1 8218 broad.mit.edu 36 22 17643274 17643274 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007098 exon2 c.G122A p.R41Q . . . DGCR8 54487 broad.mit.edu 36 22 18474184 18474184 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022720 exon11 c.C1959T p.Y653Y . . . RIMBP3 85376 broad.mit.edu 36 22 18837098 18837098 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015672 exon1 c.C4204T p.P1402S . . . SNAP29 9342 broad.mit.edu 36 22 19567844 19567844 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004782 exon4 c.C606T p.I202I . . . CCDC116 164592 broad.mit.edu 36 22 20318516 20318516 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152612 exon3 c.C278T p.A93V . . . PPIL2 23759 broad.mit.edu 36 22 20350409 20350409 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014337 exon1 c.A21G p.Q7Q . . . MAPK1 5594 broad.mit.edu 36 22 20472617 20472617 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002745 exon6 c.A785C p.N262T . . . VPREB1 7441 broad.mit.edu 36 22 20929670 20929670 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007128 exon2 c.G359A p.R120H . . . ZNF280B 140883 broad.mit.edu 36 22 21172379 21172379 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080764 exon4 c.T1345C p.C449R . . . ZNF280A 129025 broad.mit.edu 36 22 21199252 21199252 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080740 exon2 c.G703A p.A235T . . . RAB36 9609 broad.mit.edu 36 22 21818846 21818846 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004914 exon2 c.G241A p.D81N . . . ZNF70 7621 broad.mit.edu 36 22 22416481 22416481 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021916 exon2 c.G847A p.D283N . . . SMARCB1 6598 broad.mit.edu 36 22 22465823 22465823 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007468 exon3 c.G283A p.D95N . . . SLC2A11 66035 broad.mit.edu 36 22 22550010 22550010 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024939 exon6 c.G648A p.P216P . . . CABIN1 23523 broad.mit.edu 36 22 22782738 22782738 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012295 exon10 c.C1177T p.R393W . . . SGSM1 129049 broad.mit.edu 36 22 23573761 23573761 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098497 exon4 c.C300T p.S100S . . . SGSM1 129049 broad.mit.edu 36 22 23645953 23645953 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098497 exon24 c.C3186A p.F1062L . . . CRYBB3 1417 broad.mit.edu 36 22 23929759 23929759 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004076 exon4 c.G224A p.R75H . . . MYO18B 84700 broad.mit.edu 36 22 24507741 24507741 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon10 c.A2252C p.E751A . . . MYO18B 84700 broad.mit.edu 36 22 24600322 24600322 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032608 exon23 c.G4021A p.V1341I . . . HPS4 89781 broad.mit.edu 36 22 25190267 25190267 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022081 exon11 c.C1329T p.L443L . . . SRRD 402055 broad.mit.edu 36 22 25217469 25217469 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013694 exon7 c.C851A p.S284X . . . CRYBA4 1413 broad.mit.edu 36 22 25348598 25348598 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001886 exon2 c.A38T p.K13M . . . CRYBA4 1413 broad.mit.edu 36 22 25354372 25354372 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001886 exon5 c.T421C p.S141P . . . CCDC117 150275 broad.mit.edu 36 22 27509621 27509621 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173510 exon4 c.T590G p.M197R . . . XBP1 7494 broad.mit.edu 36 22 27525130 27525130 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005080 exon2 c.A239G p.N80S . . . NEFH 4744 broad.mit.edu 36 22 28215175 28215175 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021076 exon4 c.G1546T p.A516S . . . NEFH 4744 broad.mit.edu 36 22 28215421 28215421 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021076 exon4 c.G1792A p.A598T . . . THOC5 8563 broad.mit.edu 36 22 28275123 28275123 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002877 exon3 c.C14T p.S5L . . . MTMR3 8897 broad.mit.edu 36 22 28717543 28717543 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153051 exon7 c.A344G p.N115S . . . MTMR3 8897 broad.mit.edu 36 22 28745931 28745931 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153051 exon17 c.C2283T p.F761F . . . SEC14L4 284904 broad.mit.edu 36 22 29220140 29220140 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161368 exon7 c.C577T p.R193X . . . TCN2 6948 broad.mit.edu 36 22 29349040 29349040 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184726 exon8 c.C1111A p.L371I . . . LIMK2 3985 broad.mit.edu 36 22 29951780 29951780 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005569 exon2 c.G91A p.E31K . . . PATZ1 23598 broad.mit.edu 36 22 30067575 30067575 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032051 exon3 c.C1430T p.S477L . . . SFI1 9814 broad.mit.edu 36 22 30257079 30257079 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014775 exon4 c.G302A p.R101Q . . . C22orf24 25775 broad.mit.edu 36 22 30660147 30660147 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015372 exon3 c.T440G p.I147S . . . C22orf28 51493 broad.mit.edu 36 22 31138069 31138069 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014306 exon1 c.C75A p.G25G . . . FBXO7 25793 broad.mit.edu 36 22 31211122 31211122 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033024 exon4 c.A476T p.Y159F . . . FBXO7 25793 broad.mit.edu 36 22 31213792 31213792 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033024 exon5 c.C611A p.S204Y . . . TIMP3 7078 broad.mit.edu 36 22 31584006 31584006 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000362 exon4 c.C319T p.R107C . . . SYN3 8224 broad.mit.edu 36 22 31594971 31594971 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133633 exon4 c.C603A p.F201L . . . HMGXB4 10042 broad.mit.edu 36 22 33989200 33989200 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003681 exon3 c.C161A p.S54Y . . . HMGXB4 10042 broad.mit.edu 36 22 33991066 33991066 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003681 exon5 c.C685T p.R229W . . . HMOX1 3162 broad.mit.edu 36 22 34112719 34112719 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002133 exon3 c.G186T p.E62D . . . MCM5 4174 broad.mit.edu 36 22 34142693 34142693 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006739 exon12 c.C1476T p.F492F . . . APOL5 80831 broad.mit.edu 36 22 34443886 34443886 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030642 exon1 c.A22C p.N8H . . . APOL5 80831 broad.mit.edu 36 22 34452432 34452432 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030642 exon3 c.C371T p.A124V . . . APOL2 23780 broad.mit.edu 36 22 34954053 34954053 + Silent SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030882 exon5 c.G357C p.V119V . . . MYH9 4627 broad.mit.edu 36 22 35010115 35010115 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002473 exon40 c.G5735A p.R1912H . . . EIF3D 8664 broad.mit.edu 36 22 35246654 35246654 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003753 exon7 c.C493T p.R165C . . . NCF4 4689 broad.mit.edu 36 22 35590918 35590918 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013416 exon3 c.C129T p.I43I . . . CSF2RB 1439 broad.mit.edu 36 22 35649267 35649267 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000395 exon3 c.G112A p.D38N . . . CSF2RB 1439 broad.mit.edu 36 22 35655516 35655516 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000395 exon5 c.T518C p.V173A . . . IL2RB 3560 broad.mit.edu 36 22 35865107 35865107 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000878 exon5 c.G384A p.E128E . . . IL2RB 3560 broad.mit.edu 36 22 35869557 35869557 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000878 exon3 c.T153C p.D51D . . . GGA1 26088 broad.mit.edu 36 22 36346840 36346840 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172687 exon6 c.A502C p.I168L . . . TRIOBP 11078 broad.mit.edu 36 22 36450712 36450712 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039141 exon7 c.C2203T p.R735C . . . EIF3L 51386 broad.mit.edu 36 22 36603638 36603638 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016091 exon11 c.G1089A p.Q363Q . . . EIF3L 51386 broad.mit.edu 36 22 36612768 36612768 + Missense_Mutation SNP C A A rs1043783 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016091 exon12 c.C1626A p.F542L . . . C22orf23 84645 broad.mit.edu 36 22 36670444 36670444 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032561 exon6 c.G508T p.E170X . . . TMEM184B 25829 broad.mit.edu 36 22 36947425 36947425 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195072 exon10 c.C1023T p.F341F . . . DDX17 10521 broad.mit.edu 36 22 37211943 37211943 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098504 exon13 c.G2139A p.G713G . . . DMC1 11144 broad.mit.edu 36 22 37288309 37288309 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007068 exon5 c.C255A p.F85L . . . APOBEC3B 9582 broad.mit.edu 36 22 37712026 37712026 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004900 exon3 c.G438T p.T146T . . . RPL3 6122 broad.mit.edu 36 22 38042787 38042787 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033853 exon4 c.A371C p.K124T . . . ENTHD1 150350 broad.mit.edu 36 22 38491484 38491484 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152512 exon6 c.C909A p.I303I . . . ADSL 158 broad.mit.edu 36 22 39075857 39075857 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000026 exon2 c.G229A p.A77T . . . DNAJB7 150353 broad.mit.edu 36 22 39587612 39587612 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145174 exon1 c.C333A p.F111L . . . XPNPEP3 63929 broad.mit.edu 36 22 39607917 39607917 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022098 exon3 c.T379A p.F127I . . . EP300 2033 broad.mit.edu 36 22 39843293 39843293 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001429 exon2 c.T251C p.L84S . . . EP300 2033 broad.mit.edu 36 22 39886642 39886642 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001429 exon20 c.C3641A p.S1214Y . . . EP300 2033 broad.mit.edu 36 22 39902296 39902296 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001429 exon30 c.C4879T p.R1627W . . . L3MBTL2 83746 broad.mit.edu 36 22 39950172 39950172 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031488 exon9 c.G1145A p.R382Q . . . XRCC6 2547 broad.mit.edu 36 22 40372918 40372918 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001469 exon7 c.G846T p.K282N . . . SEPT3 55964 broad.mit.edu 36 22 40713588 40713588 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145733 exon5 c.A430G p.K144E . . . TCF20 6942 broad.mit.edu 36 22 40936469 40936469 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005650 exon1 c.G4787A p.R1596Q . . . TCF20 6942 broad.mit.edu 36 22 40941153 40941153 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005650 exon1 c.G103A p.A35T . . . ARFGAP3 26286 broad.mit.edu 36 22 41525041 41525041 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014570 exon15 c.C1481T p.S494L . . . PACSIN2 11252 broad.mit.edu 36 22 41614638 41614638 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184971 exon5 c.G564T p.K188N . . . TTLL1 25809 broad.mit.edu 36 22 41772368 41772368 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012263 exon10 c.C1134T p.Y378Y . . . SAMM50 25813 broad.mit.edu 36 22 42699509 42699509 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015380 exon5 c.T383C p.L128S . . . PARVG 64098 broad.mit.edu 36 22 42925871 42925871 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137606 exon12 c.A749G p.Q250R . . . PRR5-ARHGAP8 553158 broad.mit.edu 36 22 43636937 43636937 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181334 exon15 c.A1466C p.N489T . . . SMC1B 27127 broad.mit.edu 36 22 44158053 44158053 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148674 exon12 c.G2016T p.K672N . . . SMC1B 27127 broad.mit.edu 36 22 44173678 44173678 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148674 exon6 c.T1074G p.I358M . . . RIBC2 26150 broad.mit.edu 36 22 44196935 44196935 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015653 exon4 c.G642T p.K214N . . . PKDREJ 10343 broad.mit.edu 36 22 45032690 45032690 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006071 exon1 c.C5194T p.R1732C . . . PKDREJ 10343 broad.mit.edu 36 22 45033482 45033482 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006071 exon1 c.C4402T p.P1468S . . . TTC38 55020 broad.mit.edu 36 22 45053196 45053196 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017931 exon6 c.G589A p.D197N . . . TRMU 55687 broad.mit.edu 36 22 45126838 45126838 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018006 exon7 c.G719A p.R240Q . . . HIRA 7290 broad.mit.edu 36 22 17728752 17728752 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UFD1L 7353 broad.mit.edu 36 22 17818185 17818185 + 3'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UBE2L3 7332 broad.mit.edu 36 22 20305794 20305794 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MAPK1 5594 broad.mit.edu 36 22 20453487 20453487 + 3'UTR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 21054350 21054350 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 21060763 21060763 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 21341091 21341091 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 21420307 21420307 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UPB1 51733 broad.mit.edu 36 22 23228307 23228307 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SEZ6L 23544 broad.mit.edu 36 22 25077011 25077011 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OSM 5008 broad.mit.edu 36 22 28991134 28991134 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EIF4ENIF1 56478 broad.mit.edu 36 22 30176353 30176353 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 30765873 30765873 + IGR SNP G A A rs14938 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TMPRSS6 164656 broad.mit.edu 36 22 35829195 35829195 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 22 36751866 36751866 + IGR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DMC1 11144 broad.mit.edu 36 22 37294156 37294156 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ENTHD1 150350 broad.mit.edu 36 22 38561784 38561784 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SEPT3 55964 broad.mit.edu 36 22 40707787 40707787 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TCF20 6942 broad.mit.edu 36 22 40941257 40941257 + 5'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PACSIN2 11252 broad.mit.edu 36 22 41608255 41608255 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GTSE1 51512 broad.mit.edu 36 22 45086695 45086695 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SSB 6741 broad.mit.edu 36 2 170375795 170375796 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003142 exon10 c.992_993insA p.S331fs . . . ADAM23 8745 broad.mit.edu 36 2 207018300 207018300 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003812 exon2 c.239delA p.E80fs . . . LONRF2 164832 broad.mit.edu 36 2 100269914 100269914 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198461 exon11 c.C1964A p.S655Y . . . NMS 129521 broad.mit.edu 36 2 100455692 100455692 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011717 exon2 c.T80G p.F27C . . . NPAS2 4862 broad.mit.edu 36 2 100947031 100947031 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002518 exon8 c.C678A p.F226L . . . RPL31 6160 broad.mit.edu 36 2 100988973 100988973 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099693 exon4 c.C354A p.F118L . . . C2orf29 55571 broad.mit.edu 36 2 101240774 101240774 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017546 exon2 c.C604T p.R202C . . . IL1R2 7850 broad.mit.edu 36 2 102002566 102002566 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004633 exon5 c.T548G p.F183C . . . IL1RL2 8808 broad.mit.edu 36 2 102222105 102222105 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003854 exon12 c.G1700T p.R567I . . . IL18R1 8809 broad.mit.edu 36 2 102373009 102373009 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003855 exon8 c.C1011A p.I337I . . . IL18R1 8809 broad.mit.edu 36 2 102377510 102377510 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003855 exon9 c.C1261T p.P421S . . . SLC9A4 389015 broad.mit.edu 36 2 102515390 102515390 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011552 exon12 c.C2208A p.Y736X . . . MFSD9 84804 broad.mit.edu 36 2 102701512 102701512 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032718 exon6 c.C1224T p.S408S . . . TGFBRAP1 9392 broad.mit.edu 36 2 105250285 105250285 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004257 exon12 c.G2570A p.G857D . . . C2orf49 79074 broad.mit.edu 36 2 105328255 105328255 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024093 exon4 c.C694A p.P232T . . . FHL2 2274 broad.mit.edu 36 2 105346249 105346249 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039492 exon6 c.G613T p.D205Y . . . ST6GAL2 84620 broad.mit.edu 36 2 106826416 106826416 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142352 exon2 c.C450A p.F150L . . . SLC5A7 60482 broad.mit.edu 36 2 107993257 107993257 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021815 exon9 c.C1251A p.I417I . . . GCC2 9648 broad.mit.edu 36 2 108453808 108453808 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181453 exon6 c.G1591T p.D531Y . . . GCC2 9648 broad.mit.edu 36 2 108454436 108454436 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181453 exon6 c.A2219T p.N740I . . . SH3RF3 344558 broad.mit.edu 36 2 109330751 109330751 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099289 exon2 c.C763T p.P255S . . . MALL 7851 broad.mit.edu 36 2 110202448 110202448 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005434 exon3 c.C389T p.S130L . . . NPHP1 4867 broad.mit.edu 36 2 110284724 110284724 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128178 exon5 c.A470G p.Y157C . . . BUB1 699 broad.mit.edu 36 2 111131128 111131128 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004336 exon15 c.C1656A p.T552T . . . BUB1 699 broad.mit.edu 36 2 111135717 111135717 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004336 exon10 c.A1132G p.T378A . . . BCL2L11 10018 broad.mit.edu 36 2 111598065 111598065 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138621 exon2 c.G272A p.R91Q . . . ANAPC1 64682 broad.mit.edu 36 2 112308690 112308690 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022662 exon19 c.A2346C p.G782G . . . TMEM87B 84910 broad.mit.edu 36 2 112572667 112572667 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032824 exon14 c.G1297A p.D433N . . . ZC3H6 376940 broad.mit.edu 36 2 112796760 112796760 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198581 exon9 c.C1150T p.R384C . . . SLC20A1 6574 broad.mit.edu 36 2 113133612 113133612 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005415 exon8 c.C1409T p.A470V . . . ACTR3 10096 broad.mit.edu 36 2 114416389 114416389 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005721 exon8 c.A841C p.I281L . . . DPP10 57628 broad.mit.edu 36 2 115973647 115973647 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020868 exon4 c.T363G p.T121T . . . GREB1 9687 broad.mit.edu 36 2 11614229 11614229 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148903 exon2 c.G38A p.R13H . . . DPP10 57628 broad.mit.edu 36 2 116265149 116265149 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020868 exon18 c.T1554A p.N518K . . . DPP10 57628 broad.mit.edu 36 2 116289747 116289747 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020868 exon21 c.A1922G p.D641G . . . DPP10 57628 broad.mit.edu 36 2 116314837 116314837 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020868 exon25 c.C2224A p.L742I . . . GREB1 9687 broad.mit.edu 36 2 11633982 11633982 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_148903 exon5 c.G507A p.T169T . . . GREB1 9687 broad.mit.edu 36 2 11678559 11678559 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014668 exon23 c.C4122A p.V1374V . . . GREB1 9687 broad.mit.edu 36 2 11690516 11690516 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014668 exon28 c.G4867A p.E1623K . . . CCDC93 54520 broad.mit.edu 36 2 118423387 118423387 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019044 exon14 c.G1123T p.E375X . . . LPIN1 23175 broad.mit.edu 36 2 11862027 11862027 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145693 exon15 c.A1933G p.N645D . . . EN1 2019 broad.mit.edu 36 2 119317099 119317099 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001426 exon2 c.G1064A p.R355H . . . MARCO 8685 broad.mit.edu 36 2 119456442 119456442 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006770 exon12 c.G1049A p.S350N . . . SCTR 6344 broad.mit.edu 36 2 119938193 119938193 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002980 exon6 c.T612G p.D204E . . . PCDP1 200373 broad.mit.edu 36 2 120121007 120121007 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029996 exon23 c.C1371T p.C457C . . . PCDP1 200373 broad.mit.edu 36 2 120126100 120126100 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029996 exon24 c.A1541G p.D514G . . . TMEM177 80775 broad.mit.edu 36 2 120155236 120155236 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105199 exon2 c.G337T p.D113Y . . . RALB 5899 broad.mit.edu 36 2 120760105 120760105 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002881 exon3 c.C300A p.S100S . . . INHBB 3625 broad.mit.edu 36 2 120823824 120823824 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002193 exon2 c.G1128A p.K376K . . . TFCP2L1 29842 broad.mit.edu 36 2 121711673 121711673 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014553 exon10 c.C999T p.F333F . . . CLASP1 23332 broad.mit.edu 36 2 121822621 121822621 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142274 exon36 c.C4149T p.V1383V . . . CNTNAP5 129684 broad.mit.edu 36 2 125083852 125083852 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130773 exon12 c.C1758A p.I586I . . . CNTNAP5 129684 broad.mit.edu 36 2 125263991 125263991 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130773 exon18 c.G2792A p.R931H . . . CYP27C1 339761 broad.mit.edu 36 2 127667887 127667887 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001665 exon6 c.G746A p.G249D . . . ERCC3 2071 broad.mit.edu 36 2 127761013 127761013 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000122 exon8 c.C1078T p.R360C . . . IWS1 55677 broad.mit.edu 36 2 127967443 127967443 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017969 exon9 c.G1813T p.E605X . . . UGGT1 56886 broad.mit.edu 36 2 128652554 128652554 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020120 exon34 c.A3756C p.K1252N . . . RAB6C 84084 broad.mit.edu 36 2 130454518 130454518 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032144 exon1 c.C360A p.I120I . . . CCDC115 84317 broad.mit.edu 36 2 130816065 130816065 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032357 exon1 c.T104C p.V35A . . . GPR148 344561 broad.mit.edu 36 2 131203512 131203512 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207364 exon1 c.C318A p.I106I . . . POTEE 445582 broad.mit.edu 36 2 131737974 131737974 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083538 exon15 c.A2476C p.T826P . . . GPR39 2863 broad.mit.edu 36 2 132891212 132891212 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001508 exon1 c.A127G p.M43V . . . GPR39 2863 broad.mit.edu 36 2 132891433 132891433 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001508 exon1 c.G348T p.E116D . . . NCKAP5 344148 broad.mit.edu 36 2 133257279 133257279 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207363 exon14 c.A3575G p.D1192G . . . NCKAP5 344148 broad.mit.edu 36 2 133259241 133259241 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207363 exon14 c.C1613T p.T538I . . . ACMSD 130013 broad.mit.edu 36 2 135346581 135346581 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138326 exon8 c.A749G p.D250G . . . CCNT2 905 broad.mit.edu 36 2 135428084 135428084 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058241 exon9 c.C1589A p.S530Y . . . YSK4 80122 broad.mit.edu 36 2 135472964 135472964 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025052 exon5 c.G388A p.E130K . . . UBXN4 23190 broad.mit.edu 36 2 136246578 136246578 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014607 exon9 c.G941T p.R314I . . . LCT 3938 broad.mit.edu 36 2 136262512 136262512 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon17 c.A5636C p.E1879A . . . LCT 3938 broad.mit.edu 36 2 136283192 136283192 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002299 exon8 c.G3195T p.E1065D . . . HNMT 3176 broad.mit.edu 36 2 138479213 138479213 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006895 exon5 c.C471A p.F157L . . . LRP1B 53353 broad.mit.edu 36 2 140707239 140707239 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon91 c.G13786T p.E4596X . . . LRP1B 53353 broad.mit.edu 36 2 140832977 140832977 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018557 exon73 c.C11140A p.L3714I . . . LRP1B 53353 broad.mit.edu 36 2 140844762 140844762 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon71 c.G10995T p.E3665D . . . LRP1B 53353 broad.mit.edu 36 2 140931609 140931609 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon61 c.C9707A p.S3236X . . . LRP1B 53353 broad.mit.edu 36 2 140949246 140949246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon60 c.C9556T p.R3186C . . . LRP1B 53353 broad.mit.edu 36 2 140969655 140969655 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon56 c.G8983A p.D2995N . . . LRP1B 53353 broad.mit.edu 36 2 141377017 141377017 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon23 c.G3708A p.K1236K . . . LRP1B 53353 broad.mit.edu 36 2 141456207 141456207 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018557 exon18 c.C2879T p.A960V . . . LRP1B 53353 broad.mit.edu 36 2 141489776 141489776 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon13 c.G2149A p.D717N . . . LRP1B 53353 broad.mit.edu 36 2 141721346 141721346 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon5 c.A511C p.N171H . . . TPO 7173 broad.mit.edu 36 2 1419034 1419034 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175721 exon4 c.C353T p.A118V . . . LRP1B 53353 broad.mit.edu 36 2 141954449 141954449 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018557 exon3 c.G329A p.G110E . . . KYNU 8942 broad.mit.edu 36 2 143359422 143359422 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003937 exon2 c.C16A p.L6I . . . KYNU 8942 broad.mit.edu 36 2 143459220 143459220 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003937 exon9 c.A827C p.K276T . . . KYNU 8942 broad.mit.edu 36 2 143462896 143462896 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001032998 exon11 c.C915A p.F305L . . . KYNU 8942 broad.mit.edu 36 2 143514497 143514497 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003937 exon13 c.C1072T p.R358W . . . TPO 7173 broad.mit.edu 36 2 1436569 1436569 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175721 exon5 c.C579T p.P193P . . . ZEB2 9839 broad.mit.edu 36 2 144872633 144872633 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014795 exon8 c.T2591G p.F864C . . . ZEB2 9839 broad.mit.edu 36 2 144875255 144875255 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014795 exon7 c.A897C p.E299D . . . ZEB2 9839 broad.mit.edu 36 2 144878922 144878922 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014795 exon5 c.G543T p.E181D . . . ACVR2A 92 broad.mit.edu 36 2 148391336 148391336 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001616 exon6 c.G687A p.W229X . . . ORC4 5000 broad.mit.edu 36 2 148409619 148409619 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181741 exon14 c.C1241A p.A414D . . . MBD5 55777 broad.mit.edu 36 2 148936715 148936715 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018328 exon7 c.C208A p.L70I . . . MBD5 55777 broad.mit.edu 36 2 148943677 148943677 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018328 exon9 c.C1695A p.I565I . . . MBD5 55777 broad.mit.edu 36 2 148964398 148964398 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018328 exon12 c.A4028G p.K1343R . . . MBD5 55777 broad.mit.edu 36 2 148964553 148964553 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018328 exon12 c.G4183T p.G1395X . . . KIF5C 3800 broad.mit.edu 36 2 149502100 149502100 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004522 exon3 c.C276A p.I92I . . . KIF5C 3800 broad.mit.edu 36 2 149565224 149565224 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004522 exon19 c.C2180A p.S727Y . . . RND3 390 broad.mit.edu 36 2 151039741 151039741 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005168 exon4 c.C242A p.S81Y . . . RBM43 375287 broad.mit.edu 36 2 151816405 151816405 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198557 exon4 c.C335T p.A112V . . . RIF1 55183 broad.mit.edu 36 2 152038733 152038733 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177665 exon33 c.C7027T p.R2343C . . . NEB 4703 broad.mit.edu 36 2 152058921 152058921 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon174 c.G24579T p.S8193S . . . NEB 4703 broad.mit.edu 36 2 152083128 152083128 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon156 c.G22750A p.D7584N . . . NEB 4703 broad.mit.edu 36 2 152084513 152084513 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon154 c.A22495C p.N7499H . . . NEB 4703 broad.mit.edu 36 2 152098989 152098989 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon143 c.G21403A p.D7135N . . . NEB 4703 broad.mit.edu 36 2 152134902 152134902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon109 c.C17369T p.T5790I . . . NEB 4703 broad.mit.edu 36 2 152215025 152215025 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon54 c.C7342T p.R2448C . . . NEB 4703 broad.mit.edu 36 2 152215100 152215100 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon54 c.G7267T p.G2423X . . . NEB 4703 broad.mit.edu 36 2 152221172 152221172 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon49 c.G6236A p.R2079H . . . NEB 4703 broad.mit.edu 36 2 152231110 152231110 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon41 c.C4771A p.L1591I . . . NEB 4703 broad.mit.edu 36 2 152237312 152237312 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon37 c.G4116T p.K1372N . . . NEB 4703 broad.mit.edu 36 2 152252455 152252455 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon26 c.G2454T p.K818N . . . NEB 4703 broad.mit.edu 36 2 152259130 152259130 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164507 exon20 c.G1849A p.D617N . . . STAM2 10254 broad.mit.edu 36 2 152712037 152712037 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005843 exon5 c.C332A p.S111Y . . . NBAS 51594 broad.mit.edu 36 2 15459768 15459768 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015909 exon26 c.G3046T p.E1016X . . . NBAS 51594 broad.mit.edu 36 2 15475125 15475125 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015909 exon24 c.A2740C p.K914Q . . . GALNT13 114805 broad.mit.edu 36 2 154810701 154810701 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052917 exon7 c.G817T p.E273X . . . GALNT13 114805 broad.mit.edu 36 2 154960866 154960866 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052917 exon10 c.G1274T p.R425I . . . KCNJ3 3760 broad.mit.edu 36 2 155274570 155274570 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002239 exon2 c.A912T p.E304D . . . NBAS 51594 broad.mit.edu 36 2 15533346 15533346 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015909 exon14 c.G1257T p.K419N . . . KCNJ3 3760 broad.mit.edu 36 2 155419661 155419661 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002239 exon3 c.C1096A p.L366I . . . KCNJ3 3760 broad.mit.edu 36 2 155419801 155419801 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002239 exon3 c.T1236C p.F412F . . . GPD2 2820 broad.mit.edu 36 2 157040893 157040893 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083112 exon2 c.G30A p.T10T . . . CCDC148 130940 broad.mit.edu 36 2 158741328 158741328 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138803 exon13 c.T1580G p.F527C . . . PKP4 8502 broad.mit.edu 36 2 159142130 159142130 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003628 exon3 c.C234T p.I78I . . . PKP4 8502 broad.mit.edu 36 2 159222910 159222910 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003628 exon12 c.C1931A p.S644X . . . WDSUB1 151525 broad.mit.edu 36 2 159821126 159821126 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152528 exon9 c.G959A p.R320H . . . WDSUB1 151525 broad.mit.edu 36 2 159844691 159844691 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152528 exon3 c.T410C p.V137A . . . BAZ2B 29994 broad.mit.edu 36 2 160043461 160043461 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013450 exon3 c.C16T p.R6W . . . LY75 4065 broad.mit.edu 36 2 160342709 160342709 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198760 exon37 c.G5237T p.R1746M . . . PLA2R1 22925 broad.mit.edu 36 2 160514446 160514446 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001007267 exon25 c.G3628A p.V1210I . . . PLA2R1 22925 broad.mit.edu 36 2 160548723 160548723 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007267 exon13 c.G2145T p.E715D . . . PLA2R1 22925 broad.mit.edu 36 2 160552075 160552075 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007267 exon12 c.A1875C p.P625P . . . ITGB6 3694 broad.mit.edu 36 2 160688599 160688599 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000888 exon12 c.G1930T p.E644X . . . ITGB6 3694 broad.mit.edu 36 2 160738825 160738825 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000888 exon5 c.G665T p.R222I . . . ITGB6 3694 broad.mit.edu 36 2 160760292 160760292 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000888 exon4 c.G427A p.A143T . . . RBMS1 5937 broad.mit.edu 36 2 160851833 160851833 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016836 exon7 c.G649T p.E217X . . . TBR1 10716 broad.mit.edu 36 2 161981550 161981550 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006593 exon1 c.G383A p.G128D . . . SLC4A10 57282 broad.mit.edu 36 2 162469581 162469581 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178016 exon14 c.C1610T p.S537F . . . SLC4A10 57282 broad.mit.edu 36 2 162523293 162523293 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178016 exon21 c.A2787G p.S929S . . . PXDN 7837 broad.mit.edu 36 2 1627507 1627507 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012293 exon18 c.C3633T p.I1211I . . . IFIH1 64135 broad.mit.edu 36 2 162842363 162842363 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022168 exon10 c.C1852T p.R618X . . . KCNH7 90134 broad.mit.edu 36 2 163000153 163000153 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173162 exon7 c.C1734T p.I578I . . . FIGN 55137 broad.mit.edu 36 2 164175171 164175171 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018086 exon3 c.A1417C p.T473P . . . FIGN 55137 broad.mit.edu 36 2 164176110 164176110 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018086 exon3 c.G478T p.E160X . . . PXDN 7837 broad.mit.edu 36 2 1646430 1646430 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012293 exon12 c.C1521A p.I507I . . . COBLL1 22837 broad.mit.edu 36 2 165269768 165269768 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014900 exon7 c.G1090A p.A364T . . . SLC38A11 151258 broad.mit.edu 36 2 165463342 165463342 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173512 exon10 c.G1006A p.V336I . . . SCN3A 6328 broad.mit.edu 36 2 165705568 165705568 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006922 exon13 c.C1858T p.R620X . . . SCN2A 6326 broad.mit.edu 36 2 165875140 165875140 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon6 c.C759A p.I253I . . . SCN2A 6326 broad.mit.edu 36 2 165891637 165891637 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon12 c.G2046T p.K682N . . . SCN2A 6326 broad.mit.edu 36 2 165909563 165909563 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon15 c.C2815T p.L939L . . . SCN2A 6326 broad.mit.edu 36 2 165951546 165951546 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040143 exon25 c.C4596A p.V1532V . . . GALNT3 2591 broad.mit.edu 36 2 166313537 166313537 + Nonstop_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004482 exon11 c.A1902C p.X634Y . . . TTC21B 79809 broad.mit.edu 36 2 166439527 166439527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024753 exon29 c.C3935T p.A1312V . . . TTC21B 79809 broad.mit.edu 36 2 166455672 166455672 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024753 exon23 c.T3023C p.F1008S . . . TTC21B 79809 broad.mit.edu 36 2 166510330 166510330 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024753 exon4 c.G379A p.A127T . . . SCN1A 6323 broad.mit.edu 36 2 166601104 166601104 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006920 exon16 c.G3096T p.K1032N . . . SCN1A 6323 broad.mit.edu 36 2 166638157 166638157 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006920 exon1 c.C221A p.S74X . . . SCN9A 6335 broad.mit.edu 36 2 166798151 166798151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002977 exon21 c.G3836A p.R1279Q . . . SCN9A 6335 broad.mit.edu 36 2 166851152 166851152 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002977 exon11 c.C1542T p.F514F . . . SCN7A 6332 broad.mit.edu 36 2 166997322 166997322 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002976 exon15 c.A2344C p.N782H . . . SCN7A 6332 broad.mit.edu 36 2 167042328 167042328 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002976 exon2 c.C125A p.P42H . . . XIRP2 129446 broad.mit.edu 36 2 167468405 167468405 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199143 exon2 c.C167A p.S56Y . . . XIRP2 129446 broad.mit.edu 36 2 167807390 167807390 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C576T p.C192C . . . XIRP2 129446 broad.mit.edu 36 2 167808391 167808391 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C1577T p.S526L . . . XIRP2 129446 broad.mit.edu 36 2 167814048 167814048 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C7234T p.P2412S . . . XIRP2 129446 broad.mit.edu 36 2 167814722 167814722 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C7908T p.I2636I . . . XIRP2 129446 broad.mit.edu 36 2 167816443 167816443 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199144 exon7 c.C9629T p.S3210L . . . XIRP2 129446 broad.mit.edu 36 2 167823038 167823038 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199143 exon11 c.C1835A p.S612Y . . . XIRP2 129446 broad.mit.edu 36 2 167823609 167823609 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199143 exon11 c.G2406T p.K802N . . . LASS6 253782 broad.mit.edu 36 2 169282635 169282635 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203463 exon8 c.A746T p.K249I . . . ABCB11 8647 broad.mit.edu 36 2 169495553 169495553 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003742 exon25 c.G3279A p.S1093S . . . ABCB11 8647 broad.mit.edu 36 2 169522787 169522787 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003742 exon19 c.C2276A p.S759Y . . . ABCB11 8647 broad.mit.edu 36 2 169534967 169534967 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003742 exon15 c.T1643G p.F548C . . . ABCB11 8647 broad.mit.edu 36 2 169550892 169550892 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003742 exon10 c.G1057T p.E353X . . . LRP2 4036 broad.mit.edu 36 2 169711631 169711631 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon69 c.C12675T p.F4225F . . . LRP2 4036 broad.mit.edu 36 2 169752851 169752851 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon49 c.G9203A p.C3068Y . . . LRP2 4036 broad.mit.edu 36 2 169756698 169756698 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon48 c.C8922T p.G2974G . . . LRP2 4036 broad.mit.edu 36 2 169768959 169768959 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon42 c.C7784A p.A2595D . . . LRP2 4036 broad.mit.edu 36 2 169802874 169802874 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004525 exon27 c.G4479A p.A1493A . . . LRP2 4036 broad.mit.edu 36 2 169805767 169805767 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004525 exon25 c.G4022T p.G1341V . . . LRP2 4036 broad.mit.edu 36 2 169811596 169811596 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon21 c.A3055C p.N1019H . . . LRP2 4036 broad.mit.edu 36 2 169837792 169837792 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004525 exon15 c.C2007T p.G669G . . . FASTKD1 79675 broad.mit.edu 36 2 170095399 170095399 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024622 exon14 c.G2386A p.G796R . . . PPIG 9360 broad.mit.edu 36 2 170195698 170195698 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004792 exon10 c.G716A p.R239Q . . . PPIG 9360 broad.mit.edu 36 2 170201594 170201594 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004792 exon14 c.G1580A p.S527N . . . C2orf77 129881 broad.mit.edu 36 2 170218902 170218902 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085447 exon6 c.G888T p.K296N . . . C2orf77 129881 broad.mit.edu 36 2 170245878 170245878 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085447 exon2 c.A179C p.D60A . . . KLHL23 151230 broad.mit.edu 36 2 170300290 170300290 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199290 exon4 c.G520T p.E174X . . . METTL5 29081 broad.mit.edu 36 2 170385999 170385999 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014168 exon3 c.C255T p.D85D . . . UBR3 130507 broad.mit.edu 36 2 170551411 170551411 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172070 exon25 c.G3645T p.E1215D . . . UBR3 130507 broad.mit.edu 36 2 170559198 170559198 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172070 exon26 c.C3904T p.R1302C . . . UBR3 130507 broad.mit.edu 36 2 170620295 170620295 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172070 exon33 c.C4740T p.S1580S . . . UBR3 130507 broad.mit.edu 36 2 170644724 170644724 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172070 exon37 c.T5354G p.F1785C . . . MYO3B 140469 broad.mit.edu 36 2 170779221 170779221 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171642 exon4 c.C408A p.I136I . . . MYO3B 140469 broad.mit.edu 36 2 170967736 170967736 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171642 exon19 c.T2262G p.V754V . . . TLK1 9874 broad.mit.edu 36 2 171618566 171618566 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136555 exon6 c.A395C p.K132T . . . DCAF17 80067 broad.mit.edu 36 2 172013570 172013570 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025000 exon4 c.T455G p.F152C . . . SLC25A12 8604 broad.mit.edu 36 2 172457974 172457974 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003705 exon2 c.A53C p.N18T . . . ITGA6 3655 broad.mit.edu 36 2 173064063 173064063 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000210 exon21 c.T2745G p.F915L . . . RAPGEF4 11069 broad.mit.edu 36 2 173590432 173590432 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon21 c.C1962T p.G654G . . . RAPGEF4 11069 broad.mit.edu 36 2 173600061 173600061 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007023 exon25 c.C2386T p.L796L . . . RAPGEF4 11069 broad.mit.edu 36 2 173621575 173621575 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon30 c.G2855A p.R952H . . . RAPGEF4 11069 broad.mit.edu 36 2 173624671 173624671 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007023 exon31 c.A2966T p.Q989L . . . ZAK 51776 broad.mit.edu 36 2 173742807 173742807 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133646 exon3 c.G188A p.R63K . . . ZAK 51776 broad.mit.edu 36 2 173776811 173776811 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133646 exon9 c.A711C p.E237D . . . CDCA7 83879 broad.mit.edu 36 2 173939296 173939296 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031942 exon8 c.A1075G p.T359A . . . CIR1 9541 broad.mit.edu 36 2 174921599 174921599 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004882 exon10 c.C1225T p.R409X . . . WIPF1 7456 broad.mit.edu 36 2 175140119 175140119 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003387 exon7 c.G1381A p.D461N . . . RAD51AP2 729475 broad.mit.edu 36 2 17561813 17561813 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099218 exon1 c.G1351T p.V451F . . . ATP5G3 518 broad.mit.edu 36 2 175752124 175752124 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001689 exon4 c.A221C p.K74T . . . KIAA1715 80856 broad.mit.edu 36 2 176543742 176543742 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030650 exon6 c.A353C p.K118T . . . EVX2 344191 broad.mit.edu 36 2 176656697 176656697 + Silent SNP G A A rs35200230 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080458 exon1 c.C54T p.S18S . . . HOXD8 3234 broad.mit.edu 36 2 176703748 176703748 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019558 exon1 c.T408G p.F136L . . . HOXD8 3234 broad.mit.edu 36 2 176704495 176704495 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019558 exon2 c.T782G p.F261C . . . SMC6 79677 broad.mit.edu 36 2 17762849 17762849 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142286 exon12 c.G1068A p.K356K . . . HNRNPA3 220988 broad.mit.edu 36 2 177788868 177788868 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194247 exon3 c.G340T p.E114X . . . HNRNPA3 220988 broad.mit.edu 36 2 177789511 177789511 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194247 exon5 c.T588C p.C196C . . . AGPS 8540 broad.mit.edu 36 2 178034986 178034986 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003659 exon9 c.G990T p.E330D . . . GEN1 348654 broad.mit.edu 36 2 17818026 17818026 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130009 exon10 c.A1050G p.R350R . . . TTC30A 92104 broad.mit.edu 36 2 178191042 178191042 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152275 exon1 c.G634A p.A212T . . . GEN1 348654 broad.mit.edu 36 2 17825486 17825486 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130009 exon14 c.C1526T p.S509L . . . PDE11A 50940 broad.mit.edu 36 2 178644592 178644592 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016953 exon1 c.G819T p.E273D . . . PDE11A 50940 broad.mit.edu 36 2 178644846 178644846 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016953 exon1 c.G565A p.A189T . . . RBM45 129831 broad.mit.edu 36 2 178694242 178694242 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152945 exon5 c.C763A p.P255T . . . OSBPL6 114880 broad.mit.edu 36 2 178968485 178968485 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145739 exon24 c.C2770T p.R924X . . . PRKRA 8575 broad.mit.edu 36 2 179005091 179005091 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001139517 exon7 c.G888T p.K296N . . . DFNB59 494513 broad.mit.edu 36 2 179029075 179029075 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042702 exon4 c.G500A p.R167Q . . . PLEKHA3 65977 broad.mit.edu 36 2 179053867 179053867 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019091 exon1 c.A25G p.T9A . . . TTN 7273 broad.mit.edu 36 2 179101566 179101566 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon188 c.C79962A p.F26654L . . . TTN 7273 broad.mit.edu 36 2 179108480 179108480 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003319 exon186 c.G73912A p.E24638K . . . TTN 7273 broad.mit.edu 36 2 179108567 179108567 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon186 c.G73825T p.D24609Y . . . TTN 7273 broad.mit.edu 36 2 179113343 179113343 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon179 c.C70600T p.L23534F . . . TTN 7273 broad.mit.edu 36 2 179118900 179118900 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon171 c.C68113T p.P22705S . . . TTN 7273 broad.mit.edu 36 2 179125880 179125880 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon163 c.C62797T p.R20933W . . . TTN 7273 broad.mit.edu 36 2 179126275 179126275 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon163 c.A62402G p.D20801G . . . TTN 7273 broad.mit.edu 36 2 179126484 179126484 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon162 c.G62298T p.K20766N . . . TTN 7273 broad.mit.edu 36 2 179130100 179130100 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon158 c.C60831T p.F20277F . . . TTN 7273 broad.mit.edu 36 2 179133310 179133310 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C58599T p.C19533C . . . TTN 7273 broad.mit.edu 36 2 179133547 179133547 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.G58362T p.M19454I . . . TTN 7273 broad.mit.edu 36 2 179135853 179135853 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.A56056C p.I18686L . . . TTN 7273 broad.mit.edu 36 2 179136001 179136001 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C55908T p.V18636V . . . TTN 7273 broad.mit.edu 36 2 179137426 179137426 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.G54483T p.X18161Y . . . TTN 7273 broad.mit.edu 36 2 179138519 179138519 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C53390T p.A17797V . . . TTN 7273 broad.mit.edu 36 2 179143018 179143018 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.C48891T p.C16297C . . . TTN 7273 broad.mit.edu 36 2 179144050 179144050 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.A47859G p.S15953S . . . TTN 7273 broad.mit.edu 36 2 179144697 179144697 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon154 c.T47212G p.L15738V . . . TTN 7273 broad.mit.edu 36 2 179161634 179161634 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon132 c.C35868T p.D11956D . . . TTN 7273 broad.mit.edu 36 2 179165964 179165964 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon128 c.A31932G p.G10644G . . . TTN 7273 broad.mit.edu 36 2 179174728 179174728 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon114 c.T28139G p.I9380S . . . TTN 7273 broad.mit.edu 36 2 179185341 179185341 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon94 c.C22961A p.S7654Y . . . TTN 7273 broad.mit.edu 36 2 179194267 179194267 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon74 c.C18228T p.C6076C . . . TTN 7273 broad.mit.edu 36 2 179250731 179250731 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon143 c.C30421T p.L10141L . . . TTN 7273 broad.mit.edu 36 2 179286990 179286990 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon89 c.C22908A p.F7636L . . . TTN 7273 broad.mit.edu 36 2 179291093 179291093 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon83 c.T21153G p.I7051M . . . TTN 7273 broad.mit.edu 36 2 179292158 179292158 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon80 c.C20472T p.C6824C . . . TTN 7273 broad.mit.edu 36 2 179293386 179293386 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon77 c.A19616G p.D6539G . . . TTN 7273 broad.mit.edu 36 2 179294006 179294006 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133378 exon76 c.C19253A p.S6418Y . . . TTN 7273 broad.mit.edu 36 2 179294144 179294144 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon76 c.C19115T p.A6372V . . . TTN 7273 broad.mit.edu 36 2 179297388 179297388 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon69 c.C17227A p.L5743M . . . TTN 7273 broad.mit.edu 36 2 179298833 179298833 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon67 c.C16729A p.L5577I . . . TTN 7273 broad.mit.edu 36 2 179303607 179303607 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon58 c.A14166C p.K4722N . . . TTN 7273 broad.mit.edu 36 2 179303963 179303963 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon57 c.G13942T p.E4648X . . . TTN 7273 broad.mit.edu 36 2 179307716 179307716 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133378 exon48 c.C11448T p.V3816V . . . TTN 7273 broad.mit.edu 36 2 179321740 179321740 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon46 c.C13632T p.D4544D . . . TTN 7273 broad.mit.edu 36 2 179323517 179323517 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133379 exon46 c.C11855A p.S3952Y . . . TTN 7273 broad.mit.edu 36 2 179329470 179329470 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133437 exon44 c.C10465T p.P3489S . . . TTN 7273 broad.mit.edu 36 2 179352034 179352034 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon23 c.C3882A p.D1294E . . . TTN 7273 broad.mit.edu 36 2 179355345 179355345 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon19 c.A3081T p.Q1027H . . . TTN 7273 broad.mit.edu 36 2 179368161 179368161 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003319 exon7 c.C978A p.L326L . . . CCDC141 285025 broad.mit.edu 36 2 179445197 179445197 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173648 exon13 c.C1987A p.L663I . . . KCNS3 3790 broad.mit.edu 36 2 17977146 17977146 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002252 exon3 c.G1390A p.D464N . . . CWC22 57703 broad.mit.edu 36 2 180518194 180518194 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020943 exon20 c.A2634G p.R878R . . . CWC22 57703 broad.mit.edu 36 2 180546619 180546619 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020943 exon7 c.G737A p.R246Q . . . ITGA4 3676 broad.mit.edu 36 2 182095258 182095258 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000885 exon18 c.C2018T p.T673M . . . ITGA4 3676 broad.mit.edu 36 2 182104664 182104664 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000885 exon25 c.C2700A p.F900L . . . MYT1L 23040 broad.mit.edu 36 2 1822081 1822081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015025 exon21 c.C2921T p.S974F . . . SSFA2 6744 broad.mit.edu 36 2 182489006 182489006 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006751 exon11 c.G2394A p.S798S . . . PPP1R1C 151242 broad.mit.edu 36 2 182690229 182690229 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080545 exon5 c.G292T p.E98X . . . NCKAP1 10787 broad.mit.edu 36 2 183508340 183508340 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_205842 exon26 c.A2722G p.S908G . . . NCKAP1 10787 broad.mit.edu 36 2 183559192 183559192 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_205842 exon11 c.A974C p.K325T . . . ZNF804A 91752 broad.mit.edu 36 2 185509812 185509812 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194250 exon4 c.G1444T p.D482Y . . . NT5C1B 93034 broad.mit.edu 36 2 18600345 18600345 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199103 exon9 c.T1546G p.F516V . . . NT5C1B 93034 broad.mit.edu 36 2 18621603 18621603 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199086 exon8 c.A1190G p.D397G . . . FSIP2 401024 broad.mit.edu 36 2 186379381 186379381 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.G17370A p.S5790S . . . FSIP2 401024 broad.mit.edu 36 2 186380291 186380291 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.A18280G p.T6094A . . . FSIP2 401024 broad.mit.edu 36 2 186381165 186381165 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173651 exon17 c.C19154T p.S6385F . . . ZC3H15 55854 broad.mit.edu 36 2 187068284 187068284 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018471 exon2 c.T155G p.F52C . . . COL5A2 1290 broad.mit.edu 36 2 189618199 189618199 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000393 exon47 c.C3314A p.S1105Y . . . COL5A2 1290 broad.mit.edu 36 2 189636963 189636963 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000393 exon26 c.A1758C p.K586N . . . COL5A2 1290 broad.mit.edu 36 2 189652040 189652040 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000393 exon15 c.T999C p.G333G . . . SLC40A1 30061 broad.mit.edu 36 2 190136987 190136987 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014585 exon7 c.T970G p.F324V . . . PMS1 5378 broad.mit.edu 36 2 190417043 190417043 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000534 exon6 c.G691T p.E231X . . . MSTN 2660 broad.mit.edu 36 2 190633110 190633110 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005259 exon2 c.G670T p.G224C . . . C2orf88 84281 broad.mit.edu 36 2 190772852 190772852 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042519 exon2 c.G21T p.K7N . . . INPP1 3628 broad.mit.edu 36 2 190944020 190944020 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002194 exon6 c.C847T p.R283C . . . STAT1 6772 broad.mit.edu 36 2 191580544 191580544 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007315 exon5 c.G362T p.R121I . . . STAT4 6775 broad.mit.edu 36 2 191646144 191646144 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003151 exon5 c.C390A p.S130S . . . SLC39A10 57181 broad.mit.edu 36 2 196253034 196253034 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020342 exon2 c.A23C p.K8T . . . DNAH7 56171 broad.mit.edu 36 2 196533642 196533642 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018897 exon18 c.A2478C p.K826N . . . DNAH7 56171 broad.mit.edu 36 2 196545324 196545324 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018897 exon16 c.G1945T p.D649Y . . . HECW2 57520 broad.mit.edu 36 2 196813520 196813520 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon21 c.G3662A p.R1221Q . . . HECW2 57520 broad.mit.edu 36 2 196830817 196830817 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon18 c.G3394A p.D1132N . . . HECW2 57520 broad.mit.edu 36 2 196892668 196892668 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon9 c.G1191T p.E397D . . . HECW2 57520 broad.mit.edu 36 2 196892809 196892809 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020760 exon9 c.C1050T p.S350S . . . GTF3C3 9330 broad.mit.edu 36 2 197339667 197339667 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012086 exon17 c.G2405A p.R802Q . . . PGAP1 80055 broad.mit.edu 36 2 197470137 197470137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024989 exon7 c.G890A p.R297Q . . . ANKRD44 91526 broad.mit.edu 36 2 197586493 197586493 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195144 exon18 c.A1911G p.P637P . . . ANKRD44 91526 broad.mit.edu 36 2 197694496 197694496 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195144 exon8 c.C711A p.V237V . . . SF3B1 23451 broad.mit.edu 36 2 197965383 197965383 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012433 exon25 c.T3804G p.I1268M . . . MOBKL3 25843 broad.mit.edu 36 2 198108590 198108590 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015387 exon3 c.A215G p.E72G . . . RFTN2 130132 broad.mit.edu 36 2 198206765 198206765 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144629 exon4 c.G640T p.E214X . . . RFTN2 130132 broad.mit.edu 36 2 198219597 198219597 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144629 exon2 c.C178T p.L60L . . . SATB2 23314 broad.mit.edu 36 2 199954728 199954728 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015265 exon5 c.A407G p.D136G . . . WDR35 57539 broad.mit.edu 36 2 20014665 20014665 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006657 exon14 c.A1495C p.T499P . . . C2orf69 205327 broad.mit.edu 36 2 200498718 200498718 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153689 exon2 c.G1022T p.R341I . . . KCTD18 130535 broad.mit.edu 36 2 201079851 201079851 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152387 exon2 c.G134A p.R45H . . . SGOL2 151246 broad.mit.edu 36 2 201145181 201145181 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160046 exon7 c.A1867C p.I623L . . . CLK1 1195 broad.mit.edu 36 2 201434366 201434366 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001162407 exon3 c.G356T p.R119I . . . NDUFB3 4709 broad.mit.edu 36 2 201658487 201658487 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002491 exon3 c.C201A p.F67L . . . CASP10 843 broad.mit.edu 36 2 201801922 201801922 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032974 exon10 c.G1437T p.K479N . . . ALS2CR12 130540 broad.mit.edu 36 2 201861739 201861739 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127391 exon15 c.A1153C p.I385L . . . TRAK2 66008 broad.mit.edu 36 2 201962313 201962313 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015049 exon12 c.A1352G p.D451G . . . ALS2CR11 151254 broad.mit.edu 36 2 202109145 202109145 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168217 exon13 c.C1350T p.N450N . . . MPP4 58538 broad.mit.edu 36 2 202220778 202220778 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033066 exon21 c.C1600T p.R534X . . . MPP4 58538 broad.mit.edu 36 2 202253818 202253818 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033066 exon10 c.A917G p.H306R . . . ALS2 57679 broad.mit.edu 36 2 202283004 202283004 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020919 exon27 c.C4125A p.A1375A . . . ALS2 57679 broad.mit.edu 36 2 202296304 202296304 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020919 exon22 c.A3618C p.K1206N . . . FZD7 8324 broad.mit.edu 36 2 202608874 202608874 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003507 exon1 c.C1259T p.A420V . . . NOP58 51602 broad.mit.edu 36 2 202870375 202870375 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015934 exon11 c.T1100G p.V367G . . . FAM117B 150864 broad.mit.edu 36 2 203330206 203330206 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173511 exon6 c.G1130A p.R377H . . . NBEAL1 65065 broad.mit.edu 36 2 203745766 203745766 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114132 exon40 c.C6181A p.L2061I . . . ICOS 29851 broad.mit.edu 36 2 204528735 204528735 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012092 exon2 c.G190A p.D64N . . . ZDBF2 57683 broad.mit.edu 36 2 206879266 206879266 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.A1769G p.E590G . . . ZDBF2 57683 broad.mit.edu 36 2 206879694 206879694 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.G2197T p.E733X . . . ZDBF2 57683 broad.mit.edu 36 2 206879959 206879959 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.G2462T p.S821I . . . ZDBF2 57683 broad.mit.edu 36 2 206882435 206882435 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.A4938C p.K1646N . . . ZDBF2 57683 broad.mit.edu 36 2 206882680 206882680 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.A5183C p.K1728T . . . ZDBF2 57683 broad.mit.edu 36 2 206882821 206882821 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020923 exon5 c.A5324G p.K1775R . . . DYTN 391475 broad.mit.edu 36 2 207238967 207238967 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093730 exon10 c.G1012A p.D338N . . . DYTN 391475 broad.mit.edu 36 2 207273157 207273157 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001093730 exon6 c.C512T p.A171V . . . MDH1B 130752 broad.mit.edu 36 2 207312572 207312572 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039845 exon11 c.G1518T p.E506D . . . FASTKD2 22868 broad.mit.edu 36 2 207340264 207340264 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136194 exon2 c.G602A p.R201H . . . FASTKD2 22868 broad.mit.edu 36 2 207359841 207359841 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136194 exon8 c.G1567T p.D523Y . . . C2orf80 389073 broad.mit.edu 36 2 208754237 208754237 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099334 exon5 c.C244T p.R82C . . . IDH1 3417 broad.mit.edu 36 2 208812159 208812159 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005896 exon9 c.G1035A p.K345K . . . PIKFYVE 200576 broad.mit.edu 36 2 208858887 208858887 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178000 exon6 c.A806C p.D269A . . . PIKFYVE 200576 broad.mit.edu 36 2 208898897 208898897 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015040 exon20 c.G3117T p.K1039N . . . PIKFYVE 200576 broad.mit.edu 36 2 208927549 208927549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015040 exon41 c.G6116A p.R2039Q . . . MAP2 4133 broad.mit.edu 36 2 210266961 210266961 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002374 exon7 c.A1822G p.T608A . . . MAP2 4133 broad.mit.edu 36 2 210267331 210267331 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002374 exon7 c.T2192G p.I731S . . . MAP2 4133 broad.mit.edu 36 2 210267519 210267519 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002374 exon7 c.G2380T p.D794Y . . . APOB 338 broad.mit.edu 36 2 21079001 21079001 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon29 c.C12798A p.I4266I . . . APOB 338 broad.mit.edu 36 2 21082141 21082141 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C11104A p.L3702I . . . APOB 338 broad.mit.edu 36 2 21083768 21083768 + Missense_Mutation SNP C A A rs13306196 byFrequency;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.G9477T p.K3159N . . . APOB 338 broad.mit.edu 36 2 21083899 21083899 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.G9346T p.G3116X . . . APOB 338 broad.mit.edu 36 2 21086275 21086275 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C6970A p.L2324I . . . APOB 338 broad.mit.edu 36 2 21088764 21088764 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon26 c.C4481T p.S1494L . . . LANCL1 10314 broad.mit.edu 36 2 211008416 211008416 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006055 exon9 c.T1063G p.C355G . . . APOB 338 broad.mit.edu 36 2 21104407 21104407 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon14 c.C1865A p.S622Y . . . LANCL1 10314 broad.mit.edu 36 2 211049339 211049339 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006055 exon2 c.T27G p.P9P . . . CPS1 1373 broad.mit.edu 36 2 211149437 211149437 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001875 exon3 c.A359G p.Y120C . . . APOB 338 broad.mit.edu 36 2 21118847 21118847 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000384 exon3 c.C128T p.A43V . . . ERBB4 2066 broad.mit.edu 36 2 212001451 212001451 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005235 exon22 c.G2646A p.M882I . . . SPAG16 79582 broad.mit.edu 36 2 214722165 214722165 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024532 exon15 c.G1650A p.R550R . . . SPAG16 79582 broad.mit.edu 36 2 214983262 214983262 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024532 exon16 c.G1874A p.G625D . . . ABCA12 26154 broad.mit.edu 36 2 215505681 215505681 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon53 c.G7710A p.K2570K . . . ABCA12 26154 broad.mit.edu 36 2 215529728 215529728 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon42 c.T6137C p.V2046A . . . ABCA12 26154 broad.mit.edu 36 2 215573773 215573773 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon22 c.G3080T p.S1027I . . . ABCA12 26154 broad.mit.edu 36 2 215618959 215618959 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173076 exon7 c.A719C p.K240T . . . FN1 2335 broad.mit.edu 36 2 215944993 215944993 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon38 c.G6055T p.A2019S . . . FN1 2335 broad.mit.edu 36 2 215980282 215980282 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon18 c.A2526C p.R842S . . . FN1 2335 broad.mit.edu 36 2 215997272 215997272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_212476 exon8 c.G1058A p.G353D . . . XRCC5 7520 broad.mit.edu 36 2 216763248 216763248 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021141 exon17 c.G1890A p.P630P . . . MARCH4 57574 broad.mit.edu 36 2 216850701 216850701 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020814 exon3 c.C804T p.R268R . . . SMARCAL1 50485 broad.mit.edu 36 2 216988286 216988286 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014140 exon3 c.C614A p.S205Y . . . SMARCAL1 50485 broad.mit.edu 36 2 217050127 217050127 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014140 exon16 c.C2478T p.S826S . . . TNS1 7145 broad.mit.edu 36 2 218458720 218458720 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022648 exon13 c.G733T p.D245Y . . . RUFY4 285180 broad.mit.edu 36 2 218648157 218648157 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198483 exon9 c.C697T p.L233L . . . RUFY4 285180 broad.mit.edu 36 2 218648243 218648243 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198483 exon9 c.C783T p.Y261Y . . . ARPC2 10109 broad.mit.edu 36 2 218811667 218811667 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005731 exon5 c.C304A p.L102I . . . GPBAR1 151306 broad.mit.edu 36 2 218836196 218836196 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077191 exon2 c.G504A p.S168S . . . VIL1 7429 broad.mit.edu 36 2 219022208 219022208 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007127 exon20 c.G2389T p.D797Y . . . ZNF142 7701 broad.mit.edu 36 2 219215761 219215761 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105537 exon8 c.C3722T p.S1241L . . . ZNF142 7701 broad.mit.edu 36 2 219216128 219216128 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105537 exon8 c.C3355A p.L1119M . . . CYP27A1 1593 broad.mit.edu 36 2 219385375 219385375 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000784 exon3 c.C633A p.Y211X . . . PRKAG3 53632 broad.mit.edu 36 2 219397269 219397269 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017431 exon12 c.A1273G p.T425A . . . PRKAG3 53632 broad.mit.edu 36 2 219400269 219400269 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017431 exon9 c.G947A p.G316D . . . CCDC108 255101 broad.mit.edu 36 2 219577403 219577403 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194302 exon33 c.G5070T p.K1690N . . . CCDC108 255101 broad.mit.edu 36 2 219603741 219603741 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194302 exon9 c.G1075A p.E359K . . . CCDC108 255101 broad.mit.edu 36 2 219611964 219611964 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194302 exon3 c.G51T p.E17D . . . C2orf24 27013 broad.mit.edu 36 2 219746004 219746004 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015680 exon8 c.T781C p.C261R . . . ABCB6 10058 broad.mit.edu 36 2 219786849 219786849 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005689 exon9 c.C1521T p.L507L . . . ATG9A 79065 broad.mit.edu 36 2 219797188 219797188 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024085 exon7 c.C1149T p.F383F . . . GLB1L 79411 broad.mit.edu 36 2 219812625 219812625 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024506 exon9 c.C804A p.G268G . . . PTPRN 5798 broad.mit.edu 36 2 219869719 219869719 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199764 exon16 c.C2036A p.P679H . . . GMPPA 29926 broad.mit.edu 36 2 220077142 220077142 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013335 exon7 c.C583T p.R195W . . . TMEM198 130612 broad.mit.edu 36 2 220122177 220122177 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005209 exon4 c.C802T p.R268C . . . TMEM198 130612 broad.mit.edu 36 2 220122295 220122295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005209 exon4 c.G920A p.R307H . . . INHA 3623 broad.mit.edu 36 2 220148263 220148263 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002191 exon2 c.G872A p.C291Y . . . PAX3 5077 broad.mit.edu 36 2 222805114 222805114 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181457 exon5 c.G719T p.R240I . . . ACSL3 2181 broad.mit.edu 36 2 223482098 223482098 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004457 exon4 c.A364C p.K122Q . . . ACSL3 2181 broad.mit.edu 36 2 223496046 223496046 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004457 exon10 c.A1087C p.K363Q . . . DOCK10 55619 broad.mit.edu 36 2 225379194 225379194 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014689 exon34 c.C3707A p.S1236Y . . . DOCK10 55619 broad.mit.edu 36 2 225414802 225414802 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014689 exon23 c.C2624A p.S875Y . . . KIAA1486 57624 broad.mit.edu 36 2 226155225 226155225 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020864 exon4 c.C848T p.A283V . . . KIAA1486 57624 broad.mit.edu 36 2 226155352 226155352 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020864 exon4 c.C975A p.P325P . . . IRS1 3667 broad.mit.edu 36 2 227369516 227369516 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005544 exon1 c.G2183A p.C728Y . . . IRS1 3667 broad.mit.edu 36 2 227371030 227371030 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005544 exon1 c.C669T p.I223I . . . COL4A4 1286 broad.mit.edu 36 2 227667223 227667223 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000092 exon20 c.G1231T p.G411X . . . MFF 56947 broad.mit.edu 36 2 227913306 227913306 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020194 exon6 c.C484T p.R162C . . . MFF 56947 broad.mit.edu 36 2 227920340 227920340 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020194 exon8 c.C748T p.R250C . . . TM4SF20 79853 broad.mit.edu 36 2 227952134 227952134 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024795 exon1 c.T95C p.V32A . . . AGFG1 3267 broad.mit.edu 36 2 228097738 228097738 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004504 exon5 c.G557A p.R186H . . . WDR69 164781 broad.mit.edu 36 2 228491749 228491749 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178821 exon11 c.G983T p.R328I . . . SPHKAP 80309 broad.mit.edu 36 2 228591710 228591710 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142644 exon7 c.C2104T p.L702L . . . PID1 55022 broad.mit.edu 36 2 229598661 229598661 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100818 exon3 c.C585T p.S195S . . . PID1 55022 broad.mit.edu 36 2 229598805 229598805 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100818 exon3 c.C441T p.F147F . . . TRIP12 9320 broad.mit.edu 36 2 230372317 230372317 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004238 exon21 c.A3008C p.K1003T . . . SLC16A14 151473 broad.mit.edu 36 2 230610468 230610468 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152527 exon5 c.A1405C p.K469Q . . . SP140 11262 broad.mit.edu 36 2 230810138 230810138 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007237 exon2 c.G156T p.E52D . . . SP140 11262 broad.mit.edu 36 2 230882940 230882940 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007237 exon23 c.G2116A p.D706N . . . SP100 6672 broad.mit.edu 36 2 231076046 231076046 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080391 exon20 c.C1742A p.P581H . . . PSMD1 5707 broad.mit.edu 36 2 231640068 231640068 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002807 exon5 c.C509T p.S170L . . . NCL 4691 broad.mit.edu 36 2 232032008 232032008 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005381 exon7 c.C1113T p.V371V . . . DIS3L2 129563 broad.mit.edu 36 2 232836376 232836376 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152383 exon13 c.C1641T p.G547G . . . GIGYF2 26058 broad.mit.edu 36 2 233321965 233321965 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103146 exon5 c.G196T p.E66X . . . GIGYF2 26058 broad.mit.edu 36 2 233333527 233333527 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001103146 exon7 c.C473T p.S158L . . . KCNJ13 3769 broad.mit.edu 36 2 233341280 233341280 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002242 exon3 c.G948A p.E316E . . . NEU2 4759 broad.mit.edu 36 2 233607478 233607478 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005383 exon2 c.C610T p.R204C . . . ATG16L1 55054 broad.mit.edu 36 2 233863737 233863737 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190266 exon14 c.C1177T p.R393X . . . USP40 55230 broad.mit.edu 36 2 234059177 234059177 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018218 exon27 c.T3175C p.S1059P . . . USP40 55230 broad.mit.edu 36 2 234085101 234085101 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018218 exon18 c.C2311T p.R771C . . . UGT1A8 54576 broad.mit.edu 36 2 234191593 234191593 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019076 exon1 c.C501A p.V167V . . . UGT1A10 54575 broad.mit.edu 36 2 234210273 234210273 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019075 exon1 c.G366A p.S122S . . . UGT1A9 54600 broad.mit.edu 36 2 234245627 234245627 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021027 exon1 c.G308A p.R103Q . . . UGT1A7 54577 broad.mit.edu 36 2 234255783 234255783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019077 exon1 c.G461A p.G154D . . . UGT1A5 54579 broad.mit.edu 36 2 234286874 234286874 + Silent SNP G A A rs17868332 byCluster;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019078 exon1 c.G498A p.S166S . . . DNAJB3 414061 broad.mit.edu 36 2 234317115 234317115 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001394 exon1 c.G187A p.D63N . . . IQCA1 79781 broad.mit.edu 36 2 237070636 237070636 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024726 exon2 c.G245A p.R82H . . . COL6A3 1293 broad.mit.edu 36 2 237947976 237947976 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004369 exon8 c.G3497T p.G1166V . . . COL6A3 1293 broad.mit.edu 36 2 237952048 237952048 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004369 exon6 c.G2467T p.G823C . . . COL6A3 1293 broad.mit.edu 36 2 237952537 237952537 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004369 exon6 c.G1978A p.D660N . . . COL6A3 1293 broad.mit.edu 36 2 237954408 237954408 + Missense_Mutation SNP C T T rs34934127 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004369 exon5 c.G1786A p.A596T . . . MLPH 79083 broad.mit.edu 36 2 238120026 238120026 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042467 exon12 c.A1494G p.R498R . . . LRRFIP1 9208 broad.mit.edu 36 2 238326847 238326847 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004735 exon7 c.G568A p.E190K . . . RBM44 375316 broad.mit.edu 36 2 238391554 238391554 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080504 exon3 c.T1256C p.V419A . . . PER2 8864 broad.mit.edu 36 2 238844729 238844729 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022817 exon6 c.G735A p.P245P . . . TRAF3IP1 26146 broad.mit.edu 36 2 238917885 238917885 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015650 exon9 c.G1168T p.E390X . . . ATAD2B 54454 broad.mit.edu 36 2 23962106 23962106 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017552 exon5 c.G670T p.E224X . . . NDUFA10 4705 broad.mit.edu 36 2 240593324 240593324 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004544 exon8 c.G866A p.R289H . . . OR6B2 389090 broad.mit.edu 36 2 240617678 240617678 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005853 exon1 c.T842C p.V281A . . . OR6B3 150681 broad.mit.edu 36 2 240633887 240633887 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173351 exon1 c.C276A p.I92I . . . PPP1R7 5510 broad.mit.edu 36 2 241746614 241746614 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002712 exon4 c.T280G p.F94V . . . HDLBP 3069 broad.mit.edu 36 2 241828129 241828129 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005336 exon18 c.C2251T p.R751C . . . FARP2 9855 broad.mit.edu 36 2 242029566 242029566 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014808 exon13 c.C1333T p.R445C . . . ITSN2 50618 broad.mit.edu 36 2 24387048 24387048 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147152 exon6 c.A370G p.N124D . . . NCOA1 8648 broad.mit.edu 36 2 24783604 24783604 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003743 exon11 c.G1761T p.E587D . . . DNAJC27 51277 broad.mit.edu 36 2 25043651 25043651 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198559 exon2 c.C103T p.R35X . . . KIF3C 3797 broad.mit.edu 36 2 26057433 26057433 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002254 exon1 c.G858A p.R286R . . . ACP1 52 broad.mit.edu 36 2 261878 261878 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007099 exon2 c.G56A p.R19Q . . . HADHA 3030 broad.mit.edu 36 2 26274091 26274091 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000182 exon14 c.C1452T p.I484I . . . HADHA 3030 broad.mit.edu 36 2 26290863 26290863 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000182 exon9 c.C871T p.R291X . . . HADHB 3032 broad.mit.edu 36 2 26359413 26359413 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000183 exon12 c.C1051A p.L351I . . . OTOF 9381 broad.mit.edu 36 2 26559883 26559883 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194248 exon13 c.A1343G p.N448S . . . ACP1 52 broad.mit.edu 36 2 267042 267042 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007099 exon5 c.G356A p.S119N . . . ACP1 52 broad.mit.edu 36 2 267235 267235 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007099 exon6 c.C408T p.D136D . . . CENPA 1058 broad.mit.edu 36 2 26869134 26869134 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001809 exon3 c.G217T p.E73X . . . TCF23 150921 broad.mit.edu 36 2 27229174 27229174 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175769 exon3 c.G580T p.V194F . . . SLC5A6 8884 broad.mit.edu 36 2 27280888 27280888 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021095 exon9 c.C950T p.A317V . . . CAD 790 broad.mit.edu 36 2 27294305 27294305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004341 exon2 c.G139A p.A47T . . . CAD 790 broad.mit.edu 36 2 27319302 27319302 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004341 exon42 c.G6437A p.R2146Q . . . DNAJC5G 285126 broad.mit.edu 36 2 27353194 27353194 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173650 exon3 c.G94T p.D32Y . . . GTF3C2 2976 broad.mit.edu 36 2 27405269 27405269 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001035521 exon15 c.T2073G p.A691A . . . IFT172 26160 broad.mit.edu 36 2 27521691 27521691 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon46 c.C5044T p.R1682X . . . IFT172 26160 broad.mit.edu 36 2 27522665 27522665 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015662 exon43 c.A4721G p.D1574G . . . GCKR 2646 broad.mit.edu 36 2 27582114 27582114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001486 exon10 c.G776A p.R259Q . . . GCKR 2646 broad.mit.edu 36 2 27599652 27599652 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001486 exon19 c.G1720A p.A574T . . . C2orf16 84226 broad.mit.edu 36 2 27653934 27653934 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.G991A p.E331K . . . C2orf16 84226 broad.mit.edu 36 2 27654867 27654867 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.G1924T p.E642X . . . C2orf16 84226 broad.mit.edu 36 2 27655061 27655061 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.A2118G p.G706G . . . C2orf16 84226 broad.mit.edu 36 2 27658066 27658066 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.G5123T p.R1708I . . . C2orf16 84226 broad.mit.edu 36 2 27658358 27658358 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032266 exon1 c.A5415G p.R1805R . . . SLC4A1AP 22950 broad.mit.edu 36 2 27745746 27745746 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018158 exon5 c.C1333T p.R445W . . . SLC4A1AP 22950 broad.mit.edu 36 2 27751925 27751925 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018158 exon6 c.G1368T p.K456N . . . PLB1 151056 broad.mit.edu 36 2 28608553 28608553 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170585 exon9 c.C543A p.P181P . . . PLB1 151056 broad.mit.edu 36 2 28709371 28709371 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170585 exon55 c.C4026T p.R1342R . . . WDR43 23160 broad.mit.edu 36 2 28990459 28990459 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015131 exon5 c.G627A p.T209T . . . LCLAT1 253558 broad.mit.edu 36 2 30716522 30716522 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182551 exon7 c.G778T p.A260S . . . GALNT14 79623 broad.mit.edu 36 2 31021253 31021253 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024572 exon8 c.C802T p.R268C . . . EHD3 30845 broad.mit.edu 36 2 31342769 31342769 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014600 exon6 c.G1303A p.D435N . . . XDH 7498 broad.mit.edu 36 2 31416031 31416031 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000379 exon34 c.T3602C p.V1201A . . . XDH 7498 broad.mit.edu 36 2 31426583 31426583 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000379 exon25 c.G2642A p.R881Q . . . DPY30 84661 broad.mit.edu 36 2 32102822 32102822 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032574 exon5 c.A235C p.N79H . . . NLRC4 58484 broad.mit.edu 36 2 32328660 32328660 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021209 exon4 c.G1777A p.D593N . . . NLRC4 58484 broad.mit.edu 36 2 32328769 32328769 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021209 exon4 c.G1668A p.E556E . . . NLRC4 58484 broad.mit.edu 36 2 32329927 32329927 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021209 exon4 c.A510C p.E170D . . . TSSC1 7260 broad.mit.edu 36 2 3240121 3240121 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003310 exon4 c.G372A p.E124E . . . BIRC6 57448 broad.mit.edu 36 2 32494223 32494223 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon10 c.A2360C p.N787T . . . BIRC6 57448 broad.mit.edu 36 2 32564306 32564306 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon40 c.G7789A p.A2597T . . . BIRC6 57448 broad.mit.edu 36 2 32586648 32586648 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon51 c.A9798C p.K3266N . . . BIRC6 57448 broad.mit.edu 36 2 32653905 32653905 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016252 exon66 c.G13323T p.K4441N . . . LTBP1 4052 broad.mit.edu 36 2 33467788 33467788 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166264 exon27 c.C3641T p.T1214M . . . RASGRP3 25780 broad.mit.edu 36 2 33634102 33634102 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170672 exon16 c.C1543A p.L515I . . . TTC15 51112 broad.mit.edu 36 2 3384671 3384671 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016030 exon3 c.C1164T p.I388I . . . TTC15 51112 broad.mit.edu 36 2 3407399 3407399 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016030 exon5 c.C1375A p.L459I . . . VIT 5212 broad.mit.edu 36 2 36886116 36886116 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053276 exon14 c.C1194A p.F398L . . . HEATR5B 54497 broad.mit.edu 36 2 37069445 37069445 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019024 exon35 c.C5759A p.S1920X . . . HEATR5B 54497 broad.mit.edu 36 2 37109329 37109329 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019024 exon23 c.T3600G p.S1200R . . . SULT6B1 391365 broad.mit.edu 36 2 37248593 37248593 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032377 exon7 c.T787C p.C263R . . . C2orf56 55471 broad.mit.edu 36 2 37328858 37328858 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144736 exon10 c.A1187C p.K396T . . . PRKD3 23683 broad.mit.edu 36 2 37358625 37358625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005813 exon8 c.G1184A p.S395N . . . ATL2 64225 broad.mit.edu 36 2 38390117 38390117 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022374 exon9 c.C979A p.L327M . . . DHX57 90957 broad.mit.edu 36 2 38941800 38941800 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198963 exon5 c.C1256T p.S419L . . . DHX57 90957 broad.mit.edu 36 2 38942034 38942034 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198963 exon5 c.C1022A p.S341Y . . . SOS1 6654 broad.mit.edu 36 2 39135444 39135444 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005633 exon5 c.G535T p.D179Y . . . MAP4K3 8491 broad.mit.edu 36 2 39363181 39363181 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003618 exon22 c.C1606A p.L536I . . . MAP4K3 8491 broad.mit.edu 36 2 39406850 39406850 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003618 exon9 c.A603C p.G201G . . . SLC8A1 6546 broad.mit.edu 36 2 40509685 40509685 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001112800 exon1 c.G1240T p.G414W . . . SLC8A1 6546 broad.mit.edu 36 2 40510181 40510181 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001112800 exon1 c.C744T p.F248F . . . EML4 27436 broad.mit.edu 36 2 42410563 42410563 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145076 exon22 c.C2484A p.V828V . . . MTA3 57504 broad.mit.edu 36 2 42659797 42659797 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020744 exon3 c.G143A p.R48Q . . . THADA 63892 broad.mit.edu 36 2 43655136 43655136 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022065 exon11 c.G1572T p.E524D . . . LOC728819 728819 broad.mit.edu 36 2 43756761 43756761 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101330 exon1 c.C205T p.R69C . . . PLEKHH2 130271 broad.mit.edu 36 2 43790663 43790663 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172069 exon12 c.G1997T p.S666I . . . DYNC2LI1 51626 broad.mit.edu 36 2 43877363 43877363 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016008 exon8 c.T579G p.D193E . . . DYNC2LI1 51626 broad.mit.edu 36 2 43882338 43882338 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016008 exon10 c.C788A p.S263Y . . . ABCG8 64241 broad.mit.edu 36 2 43926892 43926892 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022437 exon3 c.G260A p.G87D . . . ABCG8 64241 broad.mit.edu 36 2 43955948 43955948 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022437 exon11 c.G1648A p.A550T . . . PREPL 9581 broad.mit.edu 36 2 44440260 44440260 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042385 exon1 c.C99T p.F33F . . . SIX2 10736 broad.mit.edu 36 2 45087039 45087039 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016932 exon2 c.C650T p.T217I . . . SRBD1 55133 broad.mit.edu 36 2 45666278 45666278 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018079 exon5 c.A788T p.E263V . . . SRBD1 55133 broad.mit.edu 36 2 45680179 45680179 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018079 exon4 c.G561T p.E187D . . . EPAS1 2034 broad.mit.edu 36 2 46427661 46427661 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001430 exon2 c.C172T p.R58X . . . EPAS1 2034 broad.mit.edu 36 2 46459339 46459339 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001430 exon11 c.G1483A p.D495N . . . SOCS5 9655 broad.mit.edu 36 2 46839636 46839636 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014011 exon2 c.C463T p.R155C . . . MSH2 4436 broad.mit.edu 36 2 47547439 47547439 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000251 exon10 c.A1649C p.K550T . . . MSH6 2956 broad.mit.edu 36 2 47881462 47881462 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000179 exon4 c.G2836T p.E946X MSH6,endometrium,NS,Substitution - Nonsense,0 . . MSH6 2956 broad.mit.edu 36 2 47887257 47887257 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000179 exon9 c.G3964T p.E1322X . . . STON1-GTF2A1L 286749 broad.mit.edu 36 2 48701539 48701539 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006872 exon2 c.C67T p.R23W . . . STON1-GTF2A1L 286749 broad.mit.edu 36 2 48727149 48727149 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006872 exon6 c.G442T p.A148S . . . FSHR 2492 broad.mit.edu 36 2 49043495 49043495 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181446 exon9 c.G1891A p.E631K . . . NRXN1 9378 broad.mit.edu 36 2 50576670 50576670 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon16 c.C3067A p.L1023I . . . NRXN1 9378 broad.mit.edu 36 2 50578116 50578116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon15 c.C2858T p.S953L . . . NRXN1 9378 broad.mit.edu 36 2 50611983 50611983 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135659 exon12 c.C2353T p.R785W . . . ERLEC1 27248 broad.mit.edu 36 2 53889860 53889860 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127397 exon10 c.C1047T p.V349V . . . GPR75 10936 broad.mit.edu 36 2 53934666 53934666 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006794 exon2 c.C732T p.V244V . . . SPTBN1 6711 broad.mit.edu 36 2 54639511 54639511 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178313 exon1 c.G92T p.R31I . . . SPTBN1 6711 broad.mit.edu 36 2 54711745 54711745 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178313 exon15 c.G3018A p.A1006A . . . RTN4 57142 broad.mit.edu 36 2 55106629 55106629 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020532 exon3 c.G2110T p.E704X . . . RTN4 57142 broad.mit.edu 36 2 55107035 55107035 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020532 exon3 c.T1704C p.G568G . . . RTN4 57142 broad.mit.edu 36 2 55108124 55108124 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020532 exon3 c.A615C p.E205D . . . MTIF2 4528 broad.mit.edu 36 2 55317431 55317431 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005369 exon17 c.G2041T p.D681Y . . . MTIF2 4528 broad.mit.edu 36 2 55333247 55333247 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005369 exon9 c.A711G p.G237G . . . CCDC88A 55704 broad.mit.edu 36 2 55377096 55377096 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135597 exon30 c.C4890T p.D1630D . . . CCDC88A 55704 broad.mit.edu 36 2 55444622 55444622 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001135597 exon6 c.A454G p.T152A . . . CCDC104 112942 broad.mit.edu 36 2 55604391 55604391 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080667 exon3 c.G211T p.E71X . . . SMEK2 57223 broad.mit.edu 36 2 55667343 55667343 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122964 exon6 c.C1031A p.S344Y . . . PNPT1 87178 broad.mit.edu 36 2 55760426 55760426 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033109 exon8 c.C574T p.R192X . . . PNPT1 87178 broad.mit.edu 36 2 55774354 55774354 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033109 exon1 c.G109T p.A37S . . . BCL11A 53335 broad.mit.edu 36 2 60541458 60541458 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022893 exon4 c.G2093A p.R698H . . . REL 5966 broad.mit.edu 36 2 60975053 60975053 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002908 exon3 c.A171G p.G57G . . . KIAA1841 84542 broad.mit.edu 36 2 61178465 61178465 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032506 exon12 c.C1339T p.R447W . . . USP34 9736 broad.mit.edu 36 2 61269047 61269047 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014709 exon80 c.C10335T p.D3445D . . . XPO1 7514 broad.mit.edu 36 2 61568871 61568871 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003400 exon19 c.G2246A p.R749Q . . . FAM161A 84140 broad.mit.edu 36 2 61907118 61907118 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032180 exon6 c.G1959T p.E653D . . . TMEM17 200728 broad.mit.edu 36 2 62582069 62582069 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198276 exon4 c.C376A p.L126I . . . C2orf86 51057 broad.mit.edu 36 2 63514528 63514528 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015910 exon9 c.G680A p.R227Q . . . C2orf86 51057 broad.mit.edu 36 2 63565622 63565622 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015910 exon5 c.G257A p.R86Q . . . VPS54 51542 broad.mit.edu 36 2 64014588 64014588 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005739 exon12 c.G1426T p.E476X . . . VPS54 51542 broad.mit.edu 36 2 64042697 64042697 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005739 exon7 c.C973T p.R325W . . . AFTPH 54812 broad.mit.edu 36 2 64632452 64632452 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017657 exon2 c.G340T p.E114X . . . SLC1A4 6509 broad.mit.edu 36 2 65097120 65097120 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003038 exon5 c.C843T p.I281I . . . MEIS1 4211 broad.mit.edu 36 2 66520545 66520545 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002398 exon3 c.C306T p.R102R . . . ETAA1 54465 broad.mit.edu 36 2 67483886 67483886 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019002 exon5 c.G568T p.E190X . . . ETAA1 54465 broad.mit.edu 36 2 67485864 67485864 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019002 exon5 c.T2546G p.I849S . . . PLEK 5341 broad.mit.edu 36 2 68469060 68469060 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002664 exon6 c.A695G p.D232G . . . PROKR1 10887 broad.mit.edu 36 2 68736014 68736014 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138964 exon2 c.G984T p.E328D . . . ANXA4 307 broad.mit.edu 36 2 69899261 69899261 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001153 exon10 c.C655G p.Q219E . . . ASPRV1 151516 broad.mit.edu 36 2 70041705 70041705 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152792 exon1 c.T620C p.V207A . . . PCYOX1 51449 broad.mit.edu 36 2 70357868 70357868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016297 exon6 c.G1358A p.R453Q . . . ZNF638 27332 broad.mit.edu 36 2 71504074 71504074 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014497 exon22 c.G3922T p.D1308Y . . . ZNF638 27332 broad.mit.edu 36 2 71513834 71513834 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014497 exon27 c.C5784A p.F1928L . . . RAB11FIP5 26056 broad.mit.edu 36 2 73169861 73169861 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015470 exon2 c.C522T p.S174S . . . SMYD5 10322 broad.mit.edu 36 2 73300792 73300792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006062 exon3 c.G311A p.R104H . . . ALMS1 7840 broad.mit.edu 36 2 73529739 73529739 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon8 c.G2574A p.A858A . . . ALMS1 7840 broad.mit.edu 36 2 73533358 73533358 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon8 c.G6193T p.D2065Y . . . ALMS1 7840 broad.mit.edu 36 2 73534182 73534182 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon8 c.G7017A p.T2339T . . . ALMS1 7840 broad.mit.edu 36 2 73571170 73571170 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon10 c.C8573T p.S2858L . . . ALMS1 7840 broad.mit.edu 36 2 73653086 73653086 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon16 c.A10571G p.H3524R . . . ALMS1 7840 broad.mit.edu 36 2 73653841 73653841 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015120 exon16 c.G11326A p.E3776K . . . STAMBP 10617 broad.mit.edu 36 2 73940696 73940696 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006463 exon10 c.C1128A p.F376L . . . TET3 200424 broad.mit.edu 36 2 74127791 74127791 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144993 exon1 c.G834A p.E278E . . . SLC4A5 57835 broad.mit.edu 36 2 74307699 74307699 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133478 exon27 c.C2983T p.H995Y . . . SLC4A5 57835 broad.mit.edu 36 2 74322666 74322666 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133478 exon20 c.C2081T p.A694V . . . MOGS 7841 broad.mit.edu 36 2 74543841 74543841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146158 exon4 c.G442A p.A148T . . . LOXL3 84695 broad.mit.edu 36 2 74617481 74617481 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032603 exon5 c.T775C p.S259P . . . C2orf65 130951 broad.mit.edu 36 2 74695737 74695737 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138804 exon3 c.C288A p.L96L . . . SEMA4F 10505 broad.mit.edu 36 2 74754181 74754181 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004263 exon6 c.C640T p.R214W . . . HK2 3099 broad.mit.edu 36 2 74970085 74970085 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000189 exon17 c.G2581T p.D861Y . . . TACR1 6869 broad.mit.edu 36 2 75201258 75201258 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015727 exon2 c.C534T p.V178V . . . C2orf3 6936 broad.mit.edu 36 2 75750911 75750911 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003203 exon15 c.G1964A p.R655H . . . LRRTM4 80059 broad.mit.edu 36 2 76829368 76829368 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134745 exon4 c.G1734A p.S578S . . . LRRTM4 80059 broad.mit.edu 36 2 77600080 77600080 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024993 exon3 c.C423A p.S141S . . . REG3G 130120 broad.mit.edu 36 2 79107730 79107730 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008387 exon4 c.C258A p.S86S . . . REG3A 5068 broad.mit.edu 36 2 79237878 79237878 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002580 exon6 c.C510A p.V170V . . . C2orf89 129293 broad.mit.edu 36 2 84904824 84904824 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080824 exon5 c.G951T p.K317N . . . KCMF1 56888 broad.mit.edu 36 2 85115732 85115732 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020122 exon3 c.G267A p.T89T . . . POLR1A 25885 broad.mit.edu 36 2 86122675 86122675 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015425 exon24 c.C3420T p.A1140A . . . POLR1A 25885 broad.mit.edu 36 2 86150657 86150657 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015425 exon13 c.C1861T p.P621S . . . PTCD3 55037 broad.mit.edu 36 2 86205642 86205642 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017952 exon10 c.G730A p.A244T . . . PTCD3 55037 broad.mit.edu 36 2 86213053 86213053 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017952 exon17 c.C1368A p.F456L . . . IMMT 10989 broad.mit.edu 36 2 86226792 86226792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100169 exon14 c.C1570T p.R524C . . . VPS24 51652 broad.mit.edu 36 2 86643956 86643956 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193517 exon1 c.G27T p.E9D . . . CD8B 926 broad.mit.edu 36 2 86938814 86938814 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004931 exon2 c.C280T p.R94W . . . KIDINS220 57498 broad.mit.edu 36 2 8789391 8789391 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020738 exon30 c.G4226T p.R1409I . . . SMYD1 150572 broad.mit.edu 36 2 88187075 88187075 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198274 exon8 c.C1098A p.A366A . . . RPIA 22934 broad.mit.edu 36 2 88816322 88816322 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144563 exon6 c.G549T p.K183N . . . MBOAT2 129642 broad.mit.edu 36 2 8916329 8916329 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138799 exon13 c.T1494G p.F498L . . . MBOAT2 129642 broad.mit.edu 36 2 8930877 8930877 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138799 exon8 c.C695T p.A232V . . . ASAP2 8853 broad.mit.edu 36 2 9413850 9413850 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135191 exon14 c.G1252T p.E418X . . . TEKT4 150483 broad.mit.edu 36 2 94905119 94905119 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144705 exon5 c.G996T p.K332N . . . MRPS5 64969 broad.mit.edu 36 2 95116832 95116832 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031902 exon12 c.G1290A p.T430T . . . ZNF514 84874 broad.mit.edu 36 2 95179624 95179624 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032788 exon5 c.G333A p.S111S . . . ZNF2 7549 broad.mit.edu 36 2 95211124 95211124 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017396 exon4 c.G698A p.R233Q . . . IAH1 285148 broad.mit.edu 36 2 9535922 9535922 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039613 exon3 c.C255A p.F85L . . . KCNIP3 30818 broad.mit.edu 36 2 95411138 95411138 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001034914 exon5 c.A437C p.N146T . . . ADAM17 6868 broad.mit.edu 36 2 9559786 9559786 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003183 exon13 c.A1615G p.N539D . . . TRIM43 129868 broad.mit.edu 36 2 95623807 95623807 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138800 exon2 c.C309A p.F103L . . . ASTL 431705 broad.mit.edu 36 2 96164864 96164864 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002036 exon3 c.G196T p.E66X . . . STARD7 56910 broad.mit.edu 36 2 96221894 96221894 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020151 exon6 c.C783T p.F261F . . . SNRNP200 23020 broad.mit.edu 36 2 96317339 96317339 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014014 exon25 c.C3354T p.I1118I . . . NCAPH 23397 broad.mit.edu 36 2 96396738 96396738 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015341 exon15 c.T1898C p.I633T . . . YWHAQ 10971 broad.mit.edu 36 2 9649071 9649071 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006826 exon3 c.G319T p.A107S . . . FER1L5 90342 broad.mit.edu 36 2 96729077 96729078 + Missense_Mutation DNP CG TA TA novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001113382 exon42 c.4755_4756TA . . . NA FER1L5 90342 broad.mit.edu 36 2 96729811 96729811 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113382 exon44 c.C5027A p.T1676N . . . FER1L5 90342 broad.mit.edu 36 2 96733793 96733793 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113382 exon51 c.A6024G p.A2008A . . . ANKRD36B 57730 broad.mit.edu 36 2 97498643 97498643 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025190 exon37 c.G2605T p.E869X . . . TMEM131 23505 broad.mit.edu 36 2 97870973 97870973 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015348 exon4 c.G333A p.E111E . . . CNGA3 1261 broad.mit.edu 36 2 98378760 98378760 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001298 exon8 c.T695C p.M232T . . . MGAT4A 11320 broad.mit.edu 36 2 98628390 98628390 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160154 exon6 c.A438C p.K146N . . . C2orf55 343990 broad.mit.edu 36 2 98779035 98779035 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207362 exon9 c.C2729A p.S910X . . . TSGA10 80705 broad.mit.edu 36 2 99061566 99061566 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182911 exon11 c.T870G p.S290R . . . TSGA10 80705 broad.mit.edu 36 2 99091835 99091835 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182911 exon6 c.G103T p.E35X . . . LIPT1 51601 broad.mit.edu 36 2 99145123 99145123 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145197 exon4 c.G271A p.E91K . . . LYG2 254773 broad.mit.edu 36 2 99228262 99228262 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175735 exon4 c.C276T p.C92C . . . REV1 51455 broad.mit.edu 36 2 99384246 99384246 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016316 exon23 c.C3646T p.L1216L . . . AFF3 3899 broad.mit.edu 36 2 99576540 99576540 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025108 exon14 c.C2090T p.S697F . . . AFF3 3899 broad.mit.edu 36 2 99990334 99990334 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025108 exon5 c.C270A p.L90L . . . ANAPC1 64682 broad.mit.edu 36 2 112256562 112256562 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EPB41L5 57669 broad.mit.edu 36 2 120641500 120641500 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MKI67IP 84365 broad.mit.edu 36 2 122202408 122202408 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CNTNAP5 129684 broad.mit.edu 36 2 124908530 124908530 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CNTNAP5 129684 broad.mit.edu 36 2 124998341 124998341 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRIB2 28951 broad.mit.edu 36 2 12782253 12782253 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LRP1B 53353 broad.mit.edu 36 2 140959575 140959575 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LRP1B 53353 broad.mit.edu 36 2 140961784 140961784 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KYNU 8942 broad.mit.edu 36 2 143459983 143459983 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ARHGAP15 55843 broad.mit.edu 36 2 143690496 143690496 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NMI 9111 broad.mit.edu 36 2 151836375 151836375 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NEB 4703 broad.mit.edu 36 2 152140569 152140569 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DDX1 1653 broad.mit.edu 36 2 15687283 15687283 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC4A10 57282 broad.mit.edu 36 2 162427822 162427822 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DPP4 1803 broad.mit.edu 36 2 162612154 162612154 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GCG 2641 broad.mit.edu 36 2 162708661 162708661 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GCA 25801 broad.mit.edu 36 2 162924962 162924962 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KCNH7 90134 broad.mit.edu 36 2 163403191 163403191 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCN3A 6328 broad.mit.edu 36 2 165727596 165727596 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SCN2A 6326 broad.mit.edu 36 2 165954592 165954592 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAM49A 81553 broad.mit.edu 36 2 16605829 16605829 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TTC21B 79809 broad.mit.edu 36 2 166484201 166484201 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . XIRP2 129446 broad.mit.edu 36 2 167818782 167818782 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C2orf77 129881 broad.mit.edu 36 2 170245996 170245996 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CHRNA1 1134 broad.mit.edu 36 2 175332450 175332450 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AGPS 8540 broad.mit.edu 36 2 178080939 178080939 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179110313 179110313 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179170798 179170798 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179236882 179236882 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179240701 179240701 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179265079 179265079 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179266990 179266990 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTN 7273 broad.mit.edu 36 2 179290362 179290362 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CCDC141 285025 broad.mit.edu 36 2 179410722 179410722 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CCDC141 285025 broad.mit.edu 36 2 179429379 179429379 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CWC22 57703 broad.mit.edu 36 2 180523907 180523907 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NCKAP1 10787 broad.mit.edu 36 2 183530422 183530422 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF804A 91752 broad.mit.edu 36 2 185172049 185172049 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CALCRL 10203 broad.mit.edu 36 2 187925075 187925075 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . COL3A1 1281 broad.mit.edu 36 2 189571229 189571229 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNAH7 56171 broad.mit.edu 36 2 196621262 196621262 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STK17B 9262 broad.mit.edu 36 2 196718869 196718869 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HECW2 57520 broad.mit.edu 36 2 196879448 196879448 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MOBKL3 25843 broad.mit.edu 36 2 198096582 198096582 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NOP58 51602 broad.mit.edu 36 2 202866103 202866103 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAM117B 150864 broad.mit.edu 36 2 203328653 203328653 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . APOB 338 broad.mit.edu 36 2 21092810 21092810 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ERBB4 2066 broad.mit.edu 36 2 212278371 212278371 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ERBB4 2066 broad.mit.edu 36 2 212298040 212298040 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRPM8 79054 broad.mit.edu 36 2 234581445 234581445 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IQCA1 79781 broad.mit.edu 36 2 236965460 236965460 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LRRFIP1 9208 broad.mit.edu 36 2 238321737 238321737 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RBM44 375316 broad.mit.edu 36 2 238394644 238394644 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HADHB 3032 broad.mit.edu 36 2 26346315 26346315 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HADHB 3032 broad.mit.edu 36 2 26355694 26355694 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C2orf70 339778 broad.mit.edu 36 2 26655811 26655811 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LCLAT1 253558 broad.mit.edu 36 2 30535974 30535974 + 5'UTR SNP A G G rs55723517 by1000genomes TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SPAST 6683 broad.mit.edu 36 2 32168184 32168184 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CRIM1 51232 broad.mit.edu 36 2 36627624 36627624 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STRN 6801 broad.mit.edu 36 2 36950385 36950385 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . QPCT 25797 broad.mit.edu 36 2 37440515 37440515 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SRSF7 6432 broad.mit.edu 36 2 38829305 38829305 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDKL4 344387 broad.mit.edu 36 2 39294043 39294043 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM178 130733 broad.mit.edu 36 2 39787692 39787692 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . THADA 63892 broad.mit.edu 36 2 43508879 43508879 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SRBD1 55133 broad.mit.edu 36 2 45653840 45653840 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CRIPT 9419 broad.mit.edu 36 2 46704800 46704800 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NRXN1 9378 broad.mit.edu 36 2 50578363 50578363 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ASB3 51130 broad.mit.edu 36 2 53780901 53780901 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ASB3 51130 broad.mit.edu 36 2 53895173 53895173 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EFEMP1 2202 broad.mit.edu 36 2 55951631 55951631 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ETAA1 54465 broad.mit.edu 36 2 67490679 67490679 + 3'UTR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . WDR92 116143 broad.mit.edu 36 2 68238264 68238264 + 5'Flank SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANTXR1 84168 broad.mit.edu 36 2 69225955 69225955 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SLC4A5 57835 broad.mit.edu 36 2 74303593 74303593 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C2orf3 6936 broad.mit.edu 36 2 75787293 75787293 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CTNNA2 1496 broad.mit.edu 36 2 79990441 79990441 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TCF7L1 83439 broad.mit.edu 36 2 85364219 85364219 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RETSAT 54884 broad.mit.edu 36 2 85432308 85432308 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89091066 89091066 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89223349 89223349 + IGR SNP G A A rs11546039 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89715353 89715353 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89715577 89715577 + IGR SNP T G G rs11546053 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89746308 89746308 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89830485 89830485 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 2 89830688 89830688 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM131 23505 broad.mit.edu 36 2 97745101 97745101 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AFF3 3899 broad.mit.edu 36 2 99727041 99727041 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MRPS22 56945 broad.mit.edu 36 3 140554280 140554281 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020191 exon6 c.834_835insA p.N278fs . . . CCDC39 339829 broad.mit.edu 36 3 181819827 181819827 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181426 exon16 c.2179delA p.I727fs . . . FILIP1L 11259 broad.mit.edu 36 3 101050405 101050405 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014890 exon2 c.G2085T p.V695V . . . FILIP1L 11259 broad.mit.edu 36 3 101051897 101051897 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014890 exon2 c.A593C p.K198T . . . FILIP1L 11259 broad.mit.edu 36 3 101125915 101125915 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182909 exon4 c.G454T p.E152X . . . C3orf26 84319 broad.mit.edu 36 3 101348539 101348539 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167924 exon2 c.G43T p.E15X . . . TOMM70A 9868 broad.mit.edu 36 3 101569672 101569672 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014820 exon11 c.C1579A p.L527M . . . GPR128 84873 broad.mit.edu 36 3 101856555 101856555 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032787 exon12 c.G1566A p.P522P . . . GPR128 84873 broad.mit.edu 36 3 101870586 101870586 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032787 exon15 c.G2083T p.D695Y . . . GPR128 84873 broad.mit.edu 36 3 101896491 101896491 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032787 exon16 c.G2350A p.E784K . . . TFG 10342 broad.mit.edu 36 3 101934145 101934145 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006070 exon5 c.C519A p.N173K . . . TFG 10342 broad.mit.edu 36 3 101950016 101950016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006070 exon8 c.G1154A p.R385H . . . ABI3BP 25890 broad.mit.edu 36 3 102104165 102104165 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015429 exon3 c.G336T p.K112N . . . IRAK2 3656 broad.mit.edu 36 3 10217116 10217116 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001570 exon3 c.A341C p.K114T . . . IMPG2 50939 broad.mit.edu 36 3 102430955 102430955 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016247 exon17 c.G3592T p.E1198X . . . IMPG2 50939 broad.mit.edu 36 3 102445396 102445396 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016247 exon13 c.C2469A p.I823I . . . IMPG2 50939 broad.mit.edu 36 3 102445749 102445749 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016247 exon13 c.A2116G p.I706V . . . IRAK2 3656 broad.mit.edu 36 3 10255549 10255549 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001570 exon12 c.G1591A p.D531N . . . TATDN2 9797 broad.mit.edu 36 3 10265911 10265911 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014760 exon2 c.G27T p.K9N . . . CEP97 79598 broad.mit.edu 36 3 102966463 102966463 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024548 exon11 c.C1976T p.T659I . . . ATP2B2 491 broad.mit.edu 36 3 10357369 10357369 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001683 exon17 c.C2802T p.I934I . . . CCDC54 84692 broad.mit.edu 36 3 108579505 108579505 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032600 exon1 c.C381T p.L127L . . . BBX 56987 broad.mit.edu 36 3 108957151 108957151 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020235 exon10 c.C842T p.S281L . . . CD47 961 broad.mit.edu 36 3 109261037 109261037 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198793 exon5 c.A643T p.T215S . . . MYH15 22989 broad.mit.edu 36 3 109694652 109694652 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014981 exon9 c.C834A p.I278I . . . KIAA1524 57650 broad.mit.edu 36 3 109758809 109758809 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020890 exon17 c.C2156T p.S719F . . . KIAA1524 57650 broad.mit.edu 36 3 109777849 109777849 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020890 exon8 c.T853G p.L285V . . . MORC1 27136 broad.mit.edu 36 3 110300981 110300981 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014429 exon6 c.G337T p.D113Y . . . HRH1 3269 broad.mit.edu 36 3 11276192 11276192 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000861 exon3 c.C469A p.L157M . . . ZBED2 79413 broad.mit.edu 36 3 112795203 112795203 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024508 exon2 c.G536A p.R179Q . . . CD96 10225 broad.mit.edu 36 3 112802287 112802287 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005816 exon7 c.G923T p.R308I . . . CD96 10225 broad.mit.edu 36 3 112802392 112802392 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005816 exon7 c.C1028A p.S343Y . . . PLCXD2 257068 broad.mit.edu 36 3 113047398 113047398 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153268 exon4 c.A907C p.R303R . . . PHLDB2 90102 broad.mit.edu 36 3 113115070 113115070 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001134439 exon3 c.C1550T p.A517V . . . SLC9A10 285335 broad.mit.edu 36 3 113382133 113382133 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183061 exon22 c.G2716T p.G906X . . . SLC9A10 285335 broad.mit.edu 36 3 113405841 113405841 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183061 exon17 c.G2086T p.D696Y . . . CD200 4345 broad.mit.edu 36 3 113549343 113549343 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004196 exon5 c.G745A p.D249N . . . CCDC80 151887 broad.mit.edu 36 3 113840790 113840790 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199511 exon2 c.T653C p.L218P . . . CD200R1 131450 broad.mit.edu 36 3 114126049 114126049 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170780 exon6 c.A833G p.E278G . . . CD200R1 131450 broad.mit.edu 36 3 114130526 114130526 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170780 exon4 c.C527T p.A176V . . . CD200R1 131450 broad.mit.edu 36 3 114130976 114130976 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170780 exon3 c.A202C p.N68H . . . SIDT1 54847 broad.mit.edu 36 3 114769237 114769237 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017699 exon3 c.T505G p.F169V . . . KIAA2018 205717 broad.mit.edu 36 3 114859191 114859191 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009899 exon7 c.G4028A p.R1343H . . . KIAA2018 205717 broad.mit.edu 36 3 114859626 114859626 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009899 exon7 c.C3593A p.S1198Y . . . KIAA2018 205717 broad.mit.edu 36 3 114860571 114860571 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009899 exon7 c.C2648A p.S883Y . . . GRAMD1C 54762 broad.mit.edu 36 3 115139652 115139652 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172105 exon10 c.G1048A p.V350I . . . KIAA1407 57577 broad.mit.edu 36 3 115236673 115236673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020817 exon6 c.C607T p.R203C . . . DRD3 1814 broad.mit.edu 36 3 115349081 115349081 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000796 exon4 c.G397A p.V133I . . . TIGIT 201633 broad.mit.edu 36 3 115497382 115497382 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173799 exon2 c.G362T p.R121I . . . LSAMP 4045 broad.mit.edu 36 3 117287867 117287867 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002338 exon2 c.G382A p.V128I . . . LSAMP 4045 broad.mit.edu 36 3 117287959 117287959 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002338 exon2 c.G290A p.R97Q . . . C3orf31 132001 broad.mit.edu 36 3 11860566 11860566 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138807 exon2 c.G255A p.T85T . . . UPK1B 7348 broad.mit.edu 36 3 120405463 120405463 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006952 exon8 c.C742T p.L248F . . . ARHGAP31 57514 broad.mit.edu 36 3 120615460 120615460 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020754 exon12 c.C1994A p.S665Y . . . TMEM39A 55254 broad.mit.edu 36 3 120663563 120663563 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018266 exon2 c.G49A p.A17T . . . C3orf15 89876 broad.mit.edu 36 3 120940801 120940801 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033364 exon12 c.G1471T p.E491X . . . C3orf15 89876 broad.mit.edu 36 3 120945718 120945718 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033364 exon14 c.C1887T p.D629D . . . GSK3B 2932 broad.mit.edu 36 3 121077958 121077958 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002093 exon8 c.T901C p.W301R . . . GSK3B 2932 broad.mit.edu 36 3 121203765 121203765 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002093 exon2 c.G100A p.G34S . . . GPR156 165829 broad.mit.edu 36 3 121368724 121368724 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168271 exon9 c.G2278T p.E760X . . . GPR156 165829 broad.mit.edu 36 3 121369882 121369882 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001168271 exon9 c.A1120G p.N374D . . . GPR156 165829 broad.mit.edu 36 3 121445245 121445245 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168271 exon2 c.T165G p.T55T . . . FSTL1 11167 broad.mit.edu 36 3 121613391 121613391 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007085 exon4 c.G298T p.E100X . . . SYN2 6854 broad.mit.edu 36 3 12162197 12162197 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133625 exon5 c.C543T p.F181F . . . SYN2 6854 broad.mit.edu 36 3 12199872 12199872 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133625 exon12 c.G1366A p.G456R . . . STXBP5L 9515 broad.mit.edu 36 3 122359065 122359065 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014980 exon9 c.C778A p.H260N . . . POLQ 10721 broad.mit.edu 36 3 122691889 122691889 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199420 exon16 c.G2579A p.R860Q . . . ARGFX 503582 broad.mit.edu 36 3 122787780 122787780 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012659 exon5 c.G591T p.E197D . . . FBXO40 51725 broad.mit.edu 36 3 122824142 122824142 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016298 exon3 c.A1176C p.K392N . . . HCLS1 3059 broad.mit.edu 36 3 122858865 122858865 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005335 exon3 c.C109T p.R37X . . . GOLGB1 2804 broad.mit.edu 36 3 122892356 122892356 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004487 exon14 c.G8530T p.E2844X . . . IQCB1 9657 broad.mit.edu 36 3 123027678 123027678 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001023571 exon5 c.G303T p.E101D . . . EAF2 55840 broad.mit.edu 36 3 123058686 123058686 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018456 exon4 c.C477T p.I159I . . . ILDR1 286676 broad.mit.edu 36 3 123195126 123195126 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199799 exon7 c.C1160A p.S387Y . . . ILDR1 286676 broad.mit.edu 36 3 123206805 123206805 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199799 exon3 c.C355T p.Q119X . . . CASR 846 broad.mit.edu 36 3 123485498 123485498 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000388 exon7 c.C2007T p.I669I . . . CASR 846 broad.mit.edu 36 3 123486272 123486272 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000388 exon7 c.C2781T p.P927P . . . WDR5B 54554 broad.mit.edu 36 3 123616375 123616375 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019069 exon1 c.G691A p.D231N . . . PARP9 83666 broad.mit.edu 36 3 123752156 123752156 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146103 exon6 c.T1291G p.F431V . . . PARP9 83666 broad.mit.edu 36 3 123753979 123753979 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146103 exon5 c.G1083T p.W361C . . . DTX3L 151636 broad.mit.edu 36 3 123770668 123770668 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138287 exon3 c.G1042T p.D348Y . . . PARP15 165631 broad.mit.edu 36 3 123836625 123836625 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152615 exon7 c.G939T p.K313N . . . SEMA5B 54437 broad.mit.edu 36 3 124115407 124115407 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031702 exon15 c.G2120A p.S707N . . . SEC22A 26984 broad.mit.edu 36 3 124410866 124410866 + Nonsense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012430 exon2 c.A112T p.K38X . . . CNTN6 27255 broad.mit.edu 36 3 1244521 1244521 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014461 exon4 c.G202A p.D68N . . . MYLK 4638 broad.mit.edu 36 3 124850588 124850588 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053027 exon26 c.C4335T p.P1445P . . . CCDC14 64770 broad.mit.edu 36 3 125150288 125150288 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022757 exon6 c.A645G p.L215L . . . TSEN2 80746 broad.mit.edu 36 3 12519851 12519851 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025265 exon5 c.G399A p.T133T . . . UMPS 7372 broad.mit.edu 36 3 125936668 125936668 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000373 exon2 c.C195T p.G65G . . . ITGB5 3693 broad.mit.edu 36 3 125965955 125965955 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002213 exon14 c.C2277T p.S759S . . . MUC13 56667 broad.mit.edu 36 3 126113653 126113653 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033049 exon9 c.G1237A p.D413N . . . HEG1 57493 broad.mit.edu 36 3 126230820 126230820 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020733 exon2 c.C519T p.S173S . . . ALG1L 200810 broad.mit.edu 36 3 127131069 127131069 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001195223 exon7 c.G440A p.G147D . . . ALDH1L1 10840 broad.mit.edu 36 3 127325923 127325923 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012190 exon16 c.G1862A p.G621D . . . CCDC37 348807 broad.mit.edu 36 3 127621652 127621652 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182628 exon11 c.G972T p.K324N . . . CHST13 166012 broad.mit.edu 36 3 127737875 127737875 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152889 exon2 c.G169T p.D57Y . . . TXNRD3IT1 645840 broad.mit.edu 36 3 127773841 127773841 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039783 exon3 c.C236A p.S79Y . . . CAND2 23066 broad.mit.edu 36 3 12833210 12833210 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012298 exon8 c.C1500A p.S500S . . . CAND2 23066 broad.mit.edu 36 3 12844036 12844036 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012298 exon11 c.G2957T p.G986V . . . KBTBD12 166348 broad.mit.edu 36 3 129124692 129124692 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207335 exon1 c.T98C p.V33A . . . KBTBD12 166348 broad.mit.edu 36 3 129125659 129125659 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207335 exon1 c.T1065A p.I355I . . . SEC61A1 29927 broad.mit.edu 36 3 129258334 129258334 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013336 exon5 c.A313G p.T105A . . . EEFSEC 60678 broad.mit.edu 36 3 129448542 129448542 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021937 exon2 c.A490G p.T164A . . . DNAJB8 165721 broad.mit.edu 36 3 129664659 129664659 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153330 exon3 c.G120T p.E40D . . . C3orf27 23434 broad.mit.edu 36 3 129775006 129775006 + Missense_Mutation SNP T C C rs35833142 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007354 exon3 c.A257G p.D86G . . . ACAD9 28976 broad.mit.edu 36 3 130086266 130086266 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014049 exon2 c.C231A p.F77L . . . KIAA1257 57501 broad.mit.edu 36 3 130190421 130190421 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020741 exon3 c.A293G p.E98G . . . C3orf25 90288 broad.mit.edu 36 3 130610308 130610308 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207307 exon6 c.G1119A p.P373P . . . MBD4 8930 broad.mit.edu 36 3 130638784 130638784 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003925 exon3 c.T393C p.N131N . . . PLXND1 23129 broad.mit.edu 36 3 130769236 130769236 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015103 exon21 c.G3968A p.R1323H . . . CNTN6 27255 broad.mit.edu 36 3 1312291 1312291 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014461 exon6 c.C461A p.S154Y . . . COL6A6 131873 broad.mit.edu 36 3 131772576 131772576 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102608 exon6 c.C2626A p.L876I . . . PIK3R4 30849 broad.mit.edu 36 3 131909843 131909843 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014602 exon10 c.G2515A p.E839K . . . PIK3R4 30849 broad.mit.edu 36 3 131919949 131919949 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014602 exon8 c.C2101A p.P701T . . . NEK11 79858 broad.mit.edu 36 3 132370382 132370382 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024800 exon13 c.G1195T p.G399X . . . CPNE4 131034 broad.mit.edu 36 3 132736751 132736751 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130808 exon16 c.C1652A p.S551Y . . . DNAJC13 23317 broad.mit.edu 36 3 133648984 133648984 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015268 exon4 c.G274A p.E92K . . . DNAJC13 23317 broad.mit.edu 36 3 133700821 133700821 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015268 exon37 c.C4318T p.L1440F . . . NPHP3 27031 broad.mit.edu 36 3 133894280 133894280 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153240 exon17 c.T2383G p.S795A . . . NPHP3 27031 broad.mit.edu 36 3 133914737 133914737 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153240 exon6 c.T1041G p.N347K . . . CNTN6 27255 broad.mit.edu 36 3 1346531 1346531 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014461 exon11 c.G1276A p.D426N . . . TF 7018 broad.mit.edu 36 3 134950027 134950027 + Missense_Mutation SNP G A A rs41298293 byFrequency TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001063 exon2 c.G125A p.R42H . . . SLCO2A1 6578 broad.mit.edu 36 3 135152812 135152812 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005630 exon6 c.C791A p.S264Y . . . STAG1 10274 broad.mit.edu 36 3 137722861 137722861 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005862 exon7 c.G560A p.R187Q . . . CLDN18 51208 broad.mit.edu 36 3 139211902 139211902 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016369 exon1 c.C145T p.L49F . . . DZIP1L 199221 broad.mit.edu 36 3 139296503 139296503 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170538 exon5 c.A599T p.K200I . . . DBR1 51163 broad.mit.edu 36 3 139364101 139364101 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016216 exon8 c.G955A p.A319T . . . ARMC8 25852 broad.mit.edu 36 3 139436568 139436568 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014154 exon8 c.G489A p.G163G . . . CEP70 80321 broad.mit.edu 36 3 139772650 139772650 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024491 exon5 c.G200A p.R67K . . . PRR23B 389151 broad.mit.edu 36 3 140221718 140221718 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013650 exon1 c.C476T p.A159V . . . COPB2 9276 broad.mit.edu 36 3 140576048 140576048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004766 exon7 c.C724T p.P242S . . . RBP2 5948 broad.mit.edu 36 3 140663790 140663790 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004164 exon2 c.C106T p.R36C . . . ZBTB38 253461 broad.mit.edu 36 3 142645947 142645947 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080412 exon8 c.C2027A p.S676Y . . . RASA2 5922 broad.mit.edu 36 3 142788223 142788223 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006506 exon19 c.G1872T p.K624N . . . TFDP2 7029 broad.mit.edu 36 3 143175698 143175698 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178141 exon5 c.G254A p.R85Q . . . XRN1 54464 broad.mit.edu 36 3 143622596 143622596 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019001 exon10 c.T1125G p.G375G . . . XRN1 54464 broad.mit.edu 36 3 143628295 143628295 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019001 exon3 c.T387G p.D129E . . . ATR 545 broad.mit.edu 36 3 143713838 143713838 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184 exon27 c.G4806T p.E1602D . . . ATR 545 broad.mit.edu 36 3 143764404 143764404 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184 exon4 c.G530A p.R177Q . . . ATR 545 broad.mit.edu 36 3 143767674 143767674 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184 exon3 c.G271T p.E91X . . . TRPC1 7220 broad.mit.edu 36 3 143992598 143992598 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003304 exon7 c.G1243T p.D415Y . . . TRPC1 7220 broad.mit.edu 36 3 144005597 144005597 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003304 exon10 c.G1744T p.E582X . . . PCOLCE2 26577 broad.mit.edu 36 3 144031332 144031332 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013363 exon6 c.G757T p.D253Y . . . PCOLCE2 26577 broad.mit.edu 36 3 144089303 144089303 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013363 exon2 c.T90G p.V30V . . . SLC9A9 285195 broad.mit.edu 36 3 144470486 144470486 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173653 exon15 c.C1631A p.S544Y . . . C3orf19 51244 broad.mit.edu 36 3 14684014 14684014 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016474 exon8 c.G804T p.E268D . . . C3orf20 84077 broad.mit.edu 36 3 14720904 14720904 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184958 exon7 c.G569A p.R190Q . . . PLSCR2 57047 broad.mit.edu 36 3 147649775 147649775 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020359 exon7 c.G553A p.A185T . . . C3orf20 84077 broad.mit.edu 36 3 14773952 14773952 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184958 exon13 c.C1645T p.R549W . . . FGD5 152273 broad.mit.edu 36 3 14836811 14836811 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152536 exon1 c.C1229T p.A410V . . . FGD5 152273 broad.mit.edu 36 3 14837675 14837675 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152536 exon1 c.G2093T p.R698I . . . ZIC4 84107 broad.mit.edu 36 3 148591501 148591501 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168378 exon4 c.C1061T p.S354F . . . ZIC4 84107 broad.mit.edu 36 3 148591648 148591648 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168378 exon4 c.C914T p.S305L . . . ZIC1 7545 broad.mit.edu 36 3 148610747 148610747 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003412 exon1 c.C158T p.S53L . . . ZIC1 7545 broad.mit.edu 36 3 148611560 148611560 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003412 exon1 c.G971T p.R324M . . . FGD5 152273 broad.mit.edu 36 3 14914531 14914531 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152536 exon6 c.C2991T p.F997F . . . AGTR1 185 broad.mit.edu 36 3 149942539 149942539 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000685 exon3 c.G1027T p.D343Y . . . HLTF 6596 broad.mit.edu 36 3 150239545 150239545 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139048 exon23 c.G2777A p.R926Q . . . HLTF 6596 broad.mit.edu 36 3 150242046 150242046 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139048 exon20 c.C2297A p.S766Y . . . COMMD2 51122 broad.mit.edu 36 3 150942159 150942159 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016094 exon5 c.G439A p.A147T . . . EIF2A 83939 broad.mit.edu 36 3 151772492 151772492 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032025 exon10 c.C869T p.A290V . . . FAM194A 131831 broad.mit.edu 36 3 151860377 151860377 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152394 exon14 c.G1984T p.E662X . . . SIAH2 6478 broad.mit.edu 36 3 151942627 151942627 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005067 exon2 c.T966G p.C322W . . . MED12L 116931 broad.mit.edu 36 3 152360546 152360546 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053002 exon7 c.C1075T p.P359S . . . GPR171 29909 broad.mit.edu 36 3 152399700 152399700 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013308 exon3 c.A164C p.N55T . . . IGSF10 285313 broad.mit.edu 36 3 152646514 152646514 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178822 exon4 c.A3945C p.Q1315H . . . MBNL1 4154 broad.mit.edu 36 3 153656037 153656037 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207295 exon5 c.G774T p.M258I . . . METTL6 131965 broad.mit.edu 36 3 15427934 15427934 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152396 exon6 c.C688A p.L230I . . . METTL6 131965 broad.mit.edu 36 3 15430577 15430577 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152396 exon5 c.T628G p.F210V . . . METTL6 131965 broad.mit.edu 36 3 15441514 15441514 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152396 exon3 c.C312A p.I104I . . . METTL6 131965 broad.mit.edu 36 3 15442855 15442855 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152396 exon2 c.C168A p.F56L . . . C3orf79 152118 broad.mit.edu 36 3 154685159 154685159 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101337 exon1 c.C124A p.L42I . . . C3orf79 152118 broad.mit.edu 36 3 154686554 154686554 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101337 exon2 c.G193T p.D65Y . . . COLQ 8292 broad.mit.edu 36 3 15495864 15495864 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080539 exon3 c.A249G p.G83G . . . ARHGEF26 26084 broad.mit.edu 36 3 155455878 155455878 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015595 exon15 c.G2542T p.G848X . . . GPR149 344758 broad.mit.edu 36 3 155629574 155629574 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001038705 exon1 c.C525T p.F175F . . . MME 4311 broad.mit.edu 36 3 156342749 156342749 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000902 exon12 c.T1124G p.F375C . . . PLCH1 23007 broad.mit.edu 36 3 156691294 156691294 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130960 exon18 c.G2329T p.D777Y . . . ANKRD28 23243 broad.mit.edu 36 3 15686949 15686949 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015199 exon28 c.T2994G p.N998K . . . SLC33A1 9197 broad.mit.edu 36 3 157043032 157043032 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004733 exon2 c.C846T p.N282N . . . GMPS 8833 broad.mit.edu 36 3 157111342 157111342 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003875 exon6 c.G694T p.E232X . . . KCNAB1 7881 broad.mit.edu 36 3 157714855 157714855 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172159 exon9 c.C613T p.R205X . . . TIPARP 25976 broad.mit.edu 36 3 157896478 157896478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015508 exon4 c.G1217A p.R406H . . . LEKR1 389170 broad.mit.edu 36 3 158228638 158228638 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004316 exon12 c.C1421A p.T474N . . . CCNL1 57018 broad.mit.edu 36 3 158350637 158350637 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020307 exon7 c.C790T p.R264C . . . CCNL1 57018 broad.mit.edu 36 3 158353621 158353621 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020307 exon4 c.C507T p.I169I . . . VEPH1 79674 broad.mit.edu 36 3 158628814 158628814 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167911 exon5 c.A687T p.K229N . . . GFM1 85476 broad.mit.edu 36 3 159852686 159852686 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024996 exon6 c.A797G p.E266G . . . SCHIP1 29970 broad.mit.edu 36 3 161066753 161066753 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197108 exon2 c.C171A p.S57R . . . SMC4 10051 broad.mit.edu 36 3 161604939 161604939 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002800 exon5 c.C640T p.R214X . . . SMC4 10051 broad.mit.edu 36 3 161631112 161631112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002800 exon19 c.C2827T p.R943C . . . GALNTL2 117248 broad.mit.edu 36 3 16191754 16191754 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054110 exon1 c.C92T p.A31V . . . NMD3 51068 broad.mit.edu 36 3 162438645 162438645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015938 exon8 c.G628A p.E210K . . . OTOL1 131149 broad.mit.edu 36 3 162699724 162699724 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080440 exon2 c.G436T p.G146C . . . DPH3 285381 broad.mit.edu 36 3 16280675 16280675 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206831 exon2 c.T174A p.I58I . . . DPH3 285381 broad.mit.edu 36 3 16281319 16281319 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001047434 exon1 c.C69A p.F23L . . . DAZL 1618 broad.mit.edu 36 3 16611045 16611045 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001351 exon8 c.C620T p.P207L . . . SI 6476 broad.mit.edu 36 3 166197097 166197097 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001041 exon40 c.G4612T p.E1538X . . . SI 6476 broad.mit.edu 36 3 166259739 166259739 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001041 exon11 c.G1189T p.D397Y . . . SLITRK3 22865 broad.mit.edu 36 3 166390420 166390420 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014926 exon2 c.C893T p.S298L . . . SLITRK3 22865 broad.mit.edu 36 3 166391296 166391296 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014926 exon2 c.C17T p.A6V . . . ZBBX 79740 broad.mit.edu 36 3 168498879 168498879 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024687 exon18 c.G1787T p.R596I . . . WDR49 151790 broad.mit.edu 36 3 168729660 168729660 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178824 exon10 c.G1224T p.K408N . . . GOLIM4 27333 broad.mit.edu 36 3 169210861 169210861 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014498 exon16 c.C1981T p.R661X . . . GOLIM4 27333 broad.mit.edu 36 3 169243945 169243945 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014498 exon5 c.G433T p.D145Y . . . MECOM 2122 broad.mit.edu 36 3 170316564 170316564 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164000 exon7 c.C1226T p.S409L . . . MECOM 2122 broad.mit.edu 36 3 170316904 170316904 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164000 exon7 c.G886A p.A296T . . . ARPM1 84517 broad.mit.edu 36 3 170968067 170968067 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032487 exon2 c.C966T p.T322T . . . LRRC34 151827 broad.mit.edu 36 3 171004545 171004545 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172779 exon6 c.A647G p.D216G . . . LRRIQ4 344657 broad.mit.edu 36 3 171029289 171029289 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080460 exon2 c.A1069C p.T357P . . . LRRIQ4 344657 broad.mit.edu 36 3 171038011 171038011 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080460 exon5 c.C1581T p.F527F . . . SAMD7 344658 broad.mit.edu 36 3 171127283 171127283 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182610 exon6 c.G539T p.R180I . . . SAMD7 344658 broad.mit.edu 36 3 171127464 171127464 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182610 exon6 c.G720A p.T240T . . . PRKCI 5584 broad.mit.edu 36 3 171480835 171480835 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002740 exon9 c.C832T p.R278C . . . RPL22L1 200916 broad.mit.edu 36 3 172066919 172066919 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099645 exon4 c.G313A p.E105K . . . TNIK 23043 broad.mit.edu 36 3 172264429 172264429 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161563 exon32 c.C3853T p.R1285X . . . TNIK 23043 broad.mit.edu 36 3 172284750 172284750 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161563 exon25 c.G2892T p.K964N . . . TNIK 23043 broad.mit.edu 36 3 172367584 172367584 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161563 exon10 c.G943T p.E315X . . . SPATA16 83893 broad.mit.edu 36 3 174317808 174317808 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031955 exon2 c.C408T p.R136R . . . NLGN1 22871 broad.mit.edu 36 3 174805465 174805465 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014932 exon3 c.A383C p.E128A . . . TBL1XR1 79718 broad.mit.edu 36 3 178251009 178251009 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024665 exon6 c.G511A p.E171K . . . PIK3CA 5290 broad.mit.edu 36 3 180425217 180425217 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006218 exon16 c.G2330T p.R777M . . . MRPL47 57129 broad.mit.edu 36 3 180803180 180803180 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020409 exon2 c.A198C p.E66D . . . USP13 8975 broad.mit.edu 36 3 180890725 180890725 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003940 exon3 c.G297T p.K99N . . . TTC14 151613 broad.mit.edu 36 3 181803764 181803764 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133462 exon3 c.G445T p.G149X . . . CCDC39 339829 broad.mit.edu 36 3 181847677 181847677 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181426 exon11 c.G1411A p.E471K . . . CCDC39 339829 broad.mit.edu 36 3 181860032 181860032 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181426 exon6 c.C640T p.R214C . . . SATB1 6304 broad.mit.edu 36 3 18411066 18411066 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002971 exon7 c.G1098A p.S366S . . . MCCC1 56922 broad.mit.edu 36 3 184239612 184239612 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020166 exon12 c.G1273A p.E425K . . . KLHL6 89857 broad.mit.edu 36 3 184700302 184700302 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130446 exon4 c.C917T p.S306L . . . YEATS2 55689 broad.mit.edu 36 3 184922506 184922506 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018023 exon5 c.C425A p.S142Y . . . YEATS2 55689 broad.mit.edu 36 3 185004576 185004576 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018023 exon27 c.C3690T p.C1230C . . . PARL 55486 broad.mit.edu 36 3 185030167 185030167 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018622 exon10 c.A1053G p.E351E . . . HTR3D 200909 broad.mit.edu 36 3 185238751 185238751 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182537 exon4 c.G390T p.K130N . . . HTR3C 170572 broad.mit.edu 36 3 185260820 185260820 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130770 exon9 c.C1330A p.L444I . . . EIF2B5 8893 broad.mit.edu 36 3 185338456 185338456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003907 exon4 c.C583T p.R195C . . . ABCF3 55324 broad.mit.edu 36 3 185389912 185389912 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018358 exon12 c.A1100G p.E367G . . . EIF4G1 1981 broad.mit.edu 36 3 185523387 185523387 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194947 exon13 c.T1901C p.M634T . . . EIF4G1 1981 broad.mit.edu 36 3 185527434 185527434 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194947 exon23 c.G3418T p.E1140X . . . EIF4G1 1981 broad.mit.edu 36 3 185527820 185527820 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194947 exon24 c.G3572A p.R1191Q . . . THPO 7066 broad.mit.edu 36 3 185573499 185573499 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177598 exon6 c.C541A p.L181I . . . CHRD 8646 broad.mit.edu 36 3 185585653 185585653 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003741 exon14 c.C1751T p.A584V . . . CHRD 8646 broad.mit.edu 36 3 185589444 185589444 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003741 exon22 c.C2779T p.R927X . . . VPS8 23355 broad.mit.edu 36 3 186071249 186071249 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009921 exon20 c.G1696T p.D566Y . . . EHHADH 1962 broad.mit.edu 36 3 186405105 186405105 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166415 exon6 c.C415T p.R139C . . . MAP3K13 9175 broad.mit.edu 36 3 186664119 186664119 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004721 exon8 c.C1366T p.R456X . . . LIPH 200879 broad.mit.edu 36 3 186714901 186714901 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139248 exon8 c.A1085C p.K362T . . . LIPH 200879 broad.mit.edu 36 3 186735421 186735421 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139248 exon2 c.A243G p.T81T . . . SENP2 59343 broad.mit.edu 36 3 186815202 186815202 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021627 exon11 c.G1090A p.D364N . . . IGF2BP2 10644 broad.mit.edu 36 3 186849978 186849978 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006548 exon14 c.C1500A p.N500K . . . ETV5 2119 broad.mit.edu 36 3 187305830 187305830 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004454 exon5 c.C190T p.P64S . . . TBCCD1 55171 broad.mit.edu 36 3 187756998 187756998 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134415 exon4 c.C753A p.F251L . . . HRG 3273 broad.mit.edu 36 3 187877600 187877600 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000412 exon7 c.C812A p.S271Y . . . HRG 3273 broad.mit.edu 36 3 187877772 187877772 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000412 exon7 c.A984G p.Q328Q . . . KNG1 3827 broad.mit.edu 36 3 187942776 187942776 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102416 exon10 c.G1897T p.E633X . . . RFC4 5984 broad.mit.edu 36 3 187995177 187995177 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181573 exon5 c.A374C p.N125T . . . MASP1 5648 broad.mit.edu 36 3 188420680 188420680 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001879 exon16 c.G1973C p.G658A . . . TP63 8626 broad.mit.edu 36 3 191094722 191094722 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114980 exon12 c.C1498T p.R500X . . . LEPREL1 55214 broad.mit.edu 36 3 191173476 191173476 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134418 exon11 c.G1037T p.S346I . . . CLDN16 10686 broad.mit.edu 36 3 191608896 191608896 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006580 exon4 c.A692C p.K231T . . . FGF12 2257 broad.mit.edu 36 3 193608534 193608534 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021032 exon1 c.G173A p.R58H . . . C3orf59 151963 broad.mit.edu 36 3 193999656 193999656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178496 exon2 c.G689A p.R230H . . . ATP13A5 344905 broad.mit.edu 36 3 194514519 194514519 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198505 exon19 c.G2316T p.K772N . . . ATP13A4 84239 broad.mit.edu 36 3 194663285 194663285 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032279 exon13 c.G1483A p.G495S . . . ATP13A4 84239 broad.mit.edu 36 3 194665490 194665490 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032279 exon12 c.G1394A p.G465D . . . ATP13A4 84239 broad.mit.edu 36 3 194755232 194755232 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032279 exon1 c.G51T p.E17D . . . KCNH8 131096 broad.mit.edu 36 3 19526883 19526883 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144633 exon12 c.T2065C p.S689P . . . KCNH8 131096 broad.mit.edu 36 3 19550148 19550148 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144633 exon16 c.G2877T p.W959C . . . C3orf21 152002 broad.mit.edu 36 3 196358508 196358508 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152531 exon3 c.C744T p.G248G . . . ACAP2 23527 broad.mit.edu 36 3 196583961 196583961 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012287 exon3 c.G191A p.R64Q . . . MUC4 4585 broad.mit.edu 36 3 197001888 197001888 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018406 exon2 c.G958T p.A320S . . . MUC4 4585 broad.mit.edu 36 3 197002645 197002645 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018406 exon2 c.T201C p.N67N . . . TFRC 7037 broad.mit.edu 36 3 197263236 197263236 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128148 exon19 c.G2257A p.V753I . . . FBXO45 200933 broad.mit.edu 36 3 197795411 197795411 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105573 exon3 c.G686T p.R229I . . . LRRC33 375387 broad.mit.edu 36 3 197872329 197872329 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198565 exon3 c.G1418T p.G473V . . . PIGX 54965 broad.mit.edu 36 3 197933684 197933684 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166304 exon3 c.G178T p.D60Y . . . SENP5 205564 broad.mit.edu 36 3 198097663 198097663 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152699 exon2 c.C1214A p.S405Y . . . EFHB 151651 broad.mit.edu 36 3 19899197 19899197 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144715 exon12 c.G2177A p.R726Q . . . EFHB 151651 broad.mit.edu 36 3 19922150 19922150 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144715 exon6 c.G1384A p.A462T . . . EFHB 151651 broad.mit.edu 36 3 19950380 19950380 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144715 exon1 c.G135A p.E45E . . . ZNF385D 79750 broad.mit.edu 36 3 21437825 21437825 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024697 exon8 c.G1073A p.R358Q . . . UBE2E1 7324 broad.mit.edu 36 3 23907088 23907088 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182666 exon5 c.G518T p.R173I . . . THRB 7068 broad.mit.edu 36 3 24139417 24139417 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000461 exon10 c.C1348A p.L450I . . . RARB 5915 broad.mit.edu 36 3 25517700 25517700 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000965 exon3 c.G330T p.Q110H . . . TOP2B 7155 broad.mit.edu 36 3 25637294 25637294 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001068 exon22 c.C2730G p.N910K . . . SLC4A7 9497 broad.mit.edu 36 3 27402497 27402497 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003615 exon23 c.C3355T p.R1119C . . . SLC4A7 9497 broad.mit.edu 36 3 27426009 27426009 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003615 exon13 c.A1756C p.I586L . . . SLC4A7 9497 broad.mit.edu 36 3 27453992 27453992 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003615 exon4 c.C292A p.L98I . . . EOMES 8320 broad.mit.edu 36 3 27733828 27733828 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005442 exon6 c.T1798G p.F600V . . . EOMES 8320 broad.mit.edu 36 3 27735260 27735260 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005442 exon4 c.C1287A p.F429L . . . CMC1 152100 broad.mit.edu 36 3 28332884 28332884 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182523 exon3 c.G166T p.E56X . . . ZCWPW2 152098 broad.mit.edu 36 3 28508626 28508626 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040432 exon5 c.A615C p.K205N . . . CNTN4 152330 broad.mit.edu 36 3 2903808 2903808 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175607 exon9 c.T840A p.L280L . . . RBMS3 27303 broad.mit.edu 36 3 29756264 29756264 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014483 exon5 c.C449A p.S150Y . . . CNTN4 152330 broad.mit.edu 36 3 3060370 3060370 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175607 exon22 c.G2793A p.S931S . . . TGFBR2 7048 broad.mit.edu 36 3 30661250 30661250 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024847 exon3 c.C177T p.N59N . . . TGFBR2 7048 broad.mit.edu 36 3 30704972 30704972 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024847 exon7 c.C1564T p.R522X TGFBR2,large_intestine,NS,Substitution - Nonsense,0 . . CNTN4 152330 broad.mit.edu 36 3 3072837 3072837 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175607 exon24 c.C3014T p.S1005L . . . IL5RA 3568 broad.mit.edu 36 3 3112061 3112061 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175728 exon8 c.G777T p.E259D . . . IL5RA 3568 broad.mit.edu 36 3 3114831 3114831 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175728 exon6 c.C511A p.L171I . . . TRNT1 51095 broad.mit.edu 36 3 3154132 3154132 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182916 exon3 c.G337A p.A113T . . . STT3B 201595 broad.mit.edu 36 3 31641429 31641429 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178862 exon12 c.G1747T p.D583Y . . . TRNT1 51095 broad.mit.edu 36 3 3164273 3164273 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182916 exon7 c.G942A p.K314K . . . OSBPL10 114884 broad.mit.edu 36 3 31700319 31700319 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017784 exon8 c.G1537A p.E513K . . . DYNC1LI1 51143 broad.mit.edu 36 3 32551110 32551110 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016141 exon7 c.G865T p.E289X . . . CNOT10 25904 broad.mit.edu 36 3 32736634 32736634 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015442 exon8 c.A769C p.S257R . . . ARPP21 10777 broad.mit.edu 36 3 35808912 35808912 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016300 exon19 c.C2067T p.F689F . . . ARPP21 10777 broad.mit.edu 36 3 35809012 35809012 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016300 exon19 c.A2167C p.M723L . . . TRANK1 9881 broad.mit.edu 36 3 36847841 36847841 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon21 c.G8105A p.R2702H . . . TRANK1 9881 broad.mit.edu 36 3 36849438 36849438 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014831 exon21 c.C6508T p.R2170W . . . LRRFIP2 9209 broad.mit.edu 36 3 37082775 37082775 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006309 exon23 c.C1510T p.R504X . . . GOLGA4 2803 broad.mit.edu 36 3 37343062 37343062 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172713 exon15 c.G4747T p.E1583X . . . GOLGA4 2803 broad.mit.edu 36 3 37343979 37343979 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172713 exon15 c.G5664T p.Q1888H . . . PLCD1 5333 broad.mit.edu 36 3 38025039 38025039 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006225 exon12 c.G1816A p.A606T . . . PLCD1 5333 broad.mit.edu 36 3 38025852 38025852 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006225 exon10 c.C1521A p.F507L . . . DLEC1 9940 broad.mit.edu 36 3 38055955 38055955 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007337 exon1 c.C235T p.L79L . . . DLEC1 9940 broad.mit.edu 36 3 38128811 38128811 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007337 exon25 c.C3621T p.G1207G . . . DLEC1 9940 broad.mit.edu 36 3 38134473 38134473 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007337 exon33 c.C4658T p.A1553V . . . OXSR1 9943 broad.mit.edu 36 3 38266461 38266461 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005109 exon15 c.G1323A p.R441R . . . ACVR2B 93 broad.mit.edu 36 3 38498776 38498776 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001106 exon9 c.G1158T p.M386I . . . SCN10A 6336 broad.mit.edu 36 3 38730508 38730508 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006514 exon21 c.G3749A p.R1250Q . . . SCN10A 6336 broad.mit.edu 36 3 38787796 38787796 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006514 exon4 c.G577T p.D193Y . . . SCN11A 11280 broad.mit.edu 36 3 38863503 38863503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014139 exon26 c.G5062A p.A1688T . . . TTC21A 199223 broad.mit.edu 36 3 39134656 39134656 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145755 exon7 c.C809A p.S270Y . . . CSRNP1 64651 broad.mit.edu 36 3 39160527 39160527 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033027 exon5 c.G793A p.A265T . . . XIRP1 165904 broad.mit.edu 36 3 39203793 39203793 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194293 exon2 c.C2148T p.I716I . . . XIRP1 165904 broad.mit.edu 36 3 39204620 39204620 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194293 exon2 c.T1321C p.F441L . . . CX3CR1 1524 broad.mit.edu 36 3 39282291 39282291 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171174 exon2 c.C810T p.I270I . . . CCR8 1237 broad.mit.edu 36 3 39348946 39348946 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005201 exon2 c.C120A p.V40V . . . MYRIP 25924 broad.mit.edu 36 3 39917346 39917346 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015460 exon2 c.A35C p.D12A . . . ENTPD3 956 broad.mit.edu 36 3 40440439 40440439 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001248 exon10 c.A1334G p.Q445R . . . ZNF619 285267 broad.mit.edu 36 3 40503928 40503928 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145083 exon4 c.G791T p.R264I . . . ZNF619 285267 broad.mit.edu 36 3 40504012 40504012 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145083 exon4 c.G875A p.R292Q . . . CHL1 10752 broad.mit.edu 36 3 406045 406045 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006614 exon20 c.G2358A p.L786L . . . CHL1 10752 broad.mit.edu 36 3 411423 411423 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006614 exon24 c.A2962C p.T988P . . . ULK4 54986 broad.mit.edu 36 3 41414616 41414616 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017886 exon35 c.C3636T p.D1212D . . . ULK4 54986 broad.mit.edu 36 3 41698021 41698021 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017886 exon29 c.G2960A p.R987Q . . . ULK4 54986 broad.mit.edu 36 3 41935013 41935013 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017886 exon7 c.A667C p.S223R . . . TRAK1 22906 broad.mit.edu 36 3 42219049 42219049 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042646 exon13 c.C1545A p.F515L . . . CCK 885 broad.mit.edu 36 3 42274634 42274634 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174138 exon3 c.T308C p.F103S . . . ZBTB47 92999 broad.mit.edu 36 3 42679554 42679554 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145166 exon4 c.C1668A p.S556S . . . HHATL 57467 broad.mit.edu 36 3 42714085 42714085 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020707 exon7 c.G784A p.D262N . . . CYP8B1 1582 broad.mit.edu 36 3 42890957 42890957 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004391 exon1 c.C1356A p.L452L . . . ZNF662 389114 broad.mit.edu 36 3 42930849 42930849 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134656 exon4 c.G358T p.D120Y . . . ZNF662 389114 broad.mit.edu 36 3 42931278 42931278 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134656 exon4 c.G787A p.A263T . . . ZNF662 389114 broad.mit.edu 36 3 42931708 42931708 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134656 exon4 c.G1217A p.R406K . . . SNRK 54861 broad.mit.edu 36 3 43320164 43320164 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017719 exon3 c.G465A p.K155K . . . ANO10 55129 broad.mit.edu 36 3 43577726 43577726 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018075 exon9 c.G1466A p.G489E . . . C3orf23 285343 broad.mit.edu 36 3 44416866 44416866 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173826 exon9 c.C901T p.P301S . . . ZNF445 353274 broad.mit.edu 36 3 44466993 44466993 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181489 exon6 c.A770G p.N257S . . . ZNF167 55888 broad.mit.edu 36 3 44587701 44587701 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018651 exon6 c.G2095A p.A699T . . . ZNF197 10168 broad.mit.edu 36 3 44648641 44648641 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024855 exon4 c.G591T p.E197D . . . ZNF502 91392 broad.mit.edu 36 3 44737921 44737921 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001134442 exon3 c.G608T p.R203I . . . ZNF502 91392 broad.mit.edu 36 3 44738642 44738642 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134442 exon3 c.C1329T p.G443G . . . LZTFL1 54585 broad.mit.edu 36 3 45843919 45843919 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020347 exon9 c.C814T p.R272X . . . CCR9 10803 broad.mit.edu 36 3 45918283 45918283 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006641 exon2 c.G963T p.K321N . . . CCR9 10803 broad.mit.edu 36 3 45918344 45918344 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006641 exon2 c.A1024C p.K342Q . . . FYCO1 79443 broad.mit.edu 36 3 45971860 45971860 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024513 exon14 c.G3829A p.D1277N . . . CCR3 1232 broad.mit.edu 36 3 46282163 46282163 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178328 exon3 c.C573A p.I191I . . . ITPR1 3708 broad.mit.edu 36 3 4698091 4698091 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099952 exon26 c.C3123T p.I1041I . . . SETD2 29072 broad.mit.edu 36 3 47138430 47138430 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014159 exon3 c.C2700T p.C900C . . . PTPN23 25930 broad.mit.edu 36 3 47421177 47421177 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015466 exon3 c.G191A p.G64D . . . MAP4 4134 broad.mit.edu 36 3 47933190 47933190 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134364 exon7 c.G1131T p.K377N . . . ITPR1 3708 broad.mit.edu 36 3 4796291 4796291 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099952 exon46 c.G6205A p.A2069T . . . ITPR1 3708 broad.mit.edu 36 3 4817276 4817276 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099952 exon51 c.G6955A p.A2319T . . . CDC25A 993 broad.mit.edu 36 3 48194466 48194466 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001789 exon7 c.G566T p.R189I . . . COL7A1 1294 broad.mit.edu 36 3 48602907 48602907 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000094 exon14 c.G1895A p.S632N . . . COL7A1 1294 broad.mit.edu 36 3 48606838 48606838 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000094 exon2 c.G233A p.R78H . . . CELSR3 1951 broad.mit.edu 36 3 48671663 48671663 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001407 exon1 c.G3409T p.E1137X . . . PRKAR2A 5576 broad.mit.edu 36 3 48764136 48764136 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004157 exon11 c.C1101T p.F367F . . . QRICH1 54870 broad.mit.edu 36 3 49056938 49056938 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198880 exon6 c.C1675A p.L559I . . . USP19 10869 broad.mit.edu 36 3 49126721 49126721 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199162 exon16 c.G2257A p.V753I . . . USP19 10869 broad.mit.edu 36 3 49127228 49127228 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199162 exon15 c.C2228T p.S743L . . . CCDC71 64925 broad.mit.edu 36 3 49176381 49176381 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022903 exon2 c.C265T p.R89C . . . BSN 8927 broad.mit.edu 36 3 49667085 49667085 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003458 exon5 c.C5092A p.L1698I . . . BSN 8927 broad.mit.edu 36 3 49667206 49667206 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003458 exon5 c.C5213T p.S1738L . . . BSN 8927 broad.mit.edu 36 3 49673828 49673828 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003458 exon6 c.C9546T p.G3182G . . . APEH 327 broad.mit.edu 36 3 49695675 49695675 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001640 exon22 c.C2095T p.L699F . . . RNF123 63891 broad.mit.edu 36 3 49725053 49725053 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022064 exon27 c.G2634T p.K878N . . . IP6K1 9807 broad.mit.edu 36 3 49745394 49745394 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153273 exon4 c.G450T p.K150N . . . CDHR4 389118 broad.mit.edu 36 3 49811780 49811780 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007540 exon2 c.G144A p.T48T . . . UBA7 7318 broad.mit.edu 36 3 49825503 49825503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003335 exon4 c.G463A p.V155M . . . GNAT1 2779 broad.mit.edu 36 3 50207217 50207217 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000172 exon8 c.A878G p.E293G . . . SEMA3B 7869 broad.mit.edu 36 3 50286015 50286015 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005914 exon9 c.T855C p.R285R . . . DOCK3 1795 broad.mit.edu 36 3 51362861 51362861 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004947 exon40 c.C4064T p.S1355L . . . VPRBP 9730 broad.mit.edu 36 3 51472186 51472186 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014703 exon6 c.T359C p.V120A . . . ARL8B 55207 broad.mit.edu 36 3 5189376 5189376 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018184 exon4 c.G323A p.R108Q . . . POC1A 25886 broad.mit.edu 36 3 52131436 52131436 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161581 exon9 c.T866G p.L289R . . . ALAS1 211 broad.mit.edu 36 3 52215013 52215013 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000688 exon7 c.C919T p.L307F . . . ALAS1 211 broad.mit.edu 36 3 52217142 52217142 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000688 exon9 c.C1169T p.A390V . . . TLR9 54106 broad.mit.edu 36 3 52232725 52232725 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017442 exon2 c.G647A p.R216H . . . DNAH1 25981 broad.mit.edu 36 3 52355786 52355786 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015512 exon11 c.G1915T p.D639Y . . . DNAH1 25981 broad.mit.edu 36 3 52364074 52364074 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015512 exon21 c.G3656A p.R1219H . . . BAP1 8314 broad.mit.edu 36 3 52414856 52414856 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004656 exon10 c.A896G p.N299S . . . PHF7 51533 broad.mit.edu 36 3 52430763 52430763 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016483 exon8 c.A633C p.K211N . . . GLT8D1 55830 broad.mit.edu 36 3 52704601 52704601 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152932 exon8 c.C688T p.R230C . . . NEK4 6787 broad.mit.edu 36 3 52761220 52761220 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193533 exon6 c.G869A p.S290N . . . ITIH1 3697 broad.mit.edu 36 3 52790999 52790999 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166434 exon5 c.C265A p.H89N . . . SFMBT1 51460 broad.mit.edu 36 3 52921655 52921655 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005158 exon17 c.C1669T p.R557W . . . SFMBT1 51460 broad.mit.edu 36 3 52937316 52937316 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005158 exon10 c.G979A p.A327T . . . CACNA1D 776 broad.mit.edu 36 3 53814073 53814073 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128839 exon43 c.G5537T p.R1846I . . . CACNA2D3 55799 broad.mit.edu 36 3 54636884 54636884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018398 exon10 c.G994A p.A332T . . . CACNA2D3 55799 broad.mit.edu 36 3 55027325 55027325 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018398 exon35 c.C2928T p.F976F . . . WNT5A 7474 broad.mit.edu 36 3 55488467 55488467 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003392 exon3 c.A306C p.K102N . . . ERC2 26059 broad.mit.edu 36 3 56089944 56089944 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015576 exon7 c.C1582T p.R528C . . . C3orf63 23272 broad.mit.edu 36 3 56642192 56642192 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001112736 exon18 c.A3667C p.I1223L . . . ARHGEF3 50650 broad.mit.edu 36 3 56754308 56754308 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128615 exon10 c.A931C p.N311H . . . DNAH12 201625 broad.mit.edu 36 3 57463186 57463186 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178504 exon10 c.G1147T p.E383X . . . SLMAP 7871 broad.mit.edu 36 3 57792202 57792202 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007159 exon2 c.G251T p.R84I . . . FLNB 2317 broad.mit.edu 36 3 58042411 58042411 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001457 exon4 c.G655T p.E219X . . . FLNB 2317 broad.mit.edu 36 3 58056924 58056924 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001457 exon6 c.A923G p.D308G . . . FLNB 2317 broad.mit.edu 36 3 58120326 58120326 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001457 exon42 c.G6894A p.S2298S . . . PTPRG 5793 broad.mit.edu 36 3 62179656 62179656 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002841 exon13 c.C2247T p.F749F . . . CADPS 8618 broad.mit.edu 36 3 62360229 62360229 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003716 exon30 c.C3954T p.I1318I . . . CADPS 8618 broad.mit.edu 36 3 62476798 62476798 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003716 exon16 c.C2557A p.L853I . . . CADPS 8618 broad.mit.edu 36 3 62545958 62545958 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003716 exon8 c.G1519T p.D507Y . . . CADPS 8618 broad.mit.edu 36 3 62611761 62611761 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003716 exon5 c.T1004C p.M335T . . . PRICKLE2 166336 broad.mit.edu 36 3 64107850 64107850 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198859 exon7 c.C1356T p.S452S . . . ADAMTS9 56999 broad.mit.edu 36 3 64574185 64574185 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182920 exon22 c.T3230C p.V1077A . . . ADAMTS9 56999 broad.mit.edu 36 3 64583162 64583162 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182920 exon17 c.C2530T p.R844C . . . LRIG1 26018 broad.mit.edu 36 3 66513937 66513937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015541 exon18 c.G2809A p.E937K . . . TMF1 7110 broad.mit.edu 36 3 69175605 69175605 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007114 exon4 c.G1564A p.D522N . . . MITF 4286 broad.mit.edu 36 3 70071005 70071005 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198178 exon3 c.C160T p.R54X . . . FOXP1 27086 broad.mit.edu 36 3 71108796 71108796 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032682 exon17 c.G1516A p.A506T . . . RYBP 23429 broad.mit.edu 36 3 72510366 72510366 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012234 exon4 c.T517C p.S173P . . . SHQ1 55164 broad.mit.edu 36 3 72973002 72973002 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018130 exon4 c.G370T p.E124X . . . GXYLT2 727936 broad.mit.edu 36 3 73086950 73086950 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080393 exon4 c.G612T p.K204N . . . PPP4R2 151987 broad.mit.edu 36 3 73195539 73195539 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174907 exon6 c.C445T p.R149X . . . ROBO2 6092 broad.mit.edu 36 3 77612958 77612958 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128929 exon3 c.A506G p.D169G . . . ROBO2 6092 broad.mit.edu 36 3 77706443 77706443 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002942 exon14 c.C2075T p.P692L . . . ROBO2 6092 broad.mit.edu 36 3 77749497 77749497 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128929 exon21 c.G3378A p.W1126X . . . ROBO2 6092 broad.mit.edu 36 3 77776559 77776559 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128929 exon24 c.C3890T p.A1297V . . . ROBO1 6091 broad.mit.edu 36 3 78817713 78817713 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002941 exon10 c.T1215G p.F405L . . . ROBO1 6091 broad.mit.edu 36 3 78849241 78849241 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002941 exon7 c.T791G p.F264C . . . GBE1 2632 broad.mit.edu 36 3 81837395 81837395 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000158 exon2 c.A203C p.K68T . . . LMCD1 29995 broad.mit.edu 36 3 8582327 8582327 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014583 exon5 c.C933T p.C311C . . . POU1F1 5449 broad.mit.edu 36 3 87391742 87391742 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122757 exon6 c.T946C p.C316R . . . POU1F1 5449 broad.mit.edu 36 3 87393128 87393128 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122757 exon5 c.G728A p.R243Q . . . ZNF654 55279 broad.mit.edu 36 3 88271463 88271463 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018293 exon1 c.G313T p.E105X . . . EPHA3 2042 broad.mit.edu 36 3 89341828 89341828 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005233 exon3 c.G282T p.K94N . . . EPHA3 2042 broad.mit.edu 36 3 89342167 89342167 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005233 exon3 c.G621A p.K207K . . . SRGAP3 9901 broad.mit.edu 36 3 9074962 9074962 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014850 exon7 c.C996T p.F332F . . . THUMPD3 25917 broad.mit.edu 36 3 9397292 9397292 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015453 exon7 c.A1114T p.I372F . . . THUMPD3 25917 broad.mit.edu 36 3 9401367 9401367 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015453 exon10 c.G1519A p.E507K . . . PROS1 5627 broad.mit.edu 36 3 95107432 95107432 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000313 exon6 c.G487A p.D163N . . . DHFRL1 200895 broad.mit.edu 36 3 95262902 95262902 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195643 exon2 c.G144T p.Q48H . . . BRPF1 7862 broad.mit.edu 36 3 9760550 9760550 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004634 exon8 c.C2582T p.A861V . . . EPHA6 285220 broad.mit.edu 36 3 98685570 98685570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080448 exon10 c.G2177A p.R726H . . . MINA 84864 broad.mit.edu 36 3 99147404 99147404 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042533 exon9 c.G1167T p.K389N . . . OR5AC2 81050 broad.mit.edu 36 3 99289439 99289439 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_054106 exon1 c.G733A p.A245T . . . IL17RC 84818 broad.mit.edu 36 3 9937199 9937199 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153460 exon6 c.G490A p.E164K . . . OR5H2 79310 broad.mit.edu 36 3 99485260 99485260 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005482 exon1 c.C839A p.S280Y . . . OR5K4 403278 broad.mit.edu 36 3 99555693 99555693 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005517 exon1 c.T306G p.Y102X . . . OR5K3 403277 broad.mit.edu 36 3 99593014 99593014 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005516 exon1 c.T815G p.V272G . . . GPR15 2838 broad.mit.edu 36 3 99733727 99733727 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005290 exon1 c.C160A p.L54I . . . FANCD2 2177 broad.mit.edu 36 3 10078823 10078823 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TBC1D23 55773 broad.mit.edu 36 3 101517727 101517727 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ALCAM 214 broad.mit.edu 36 3 106746881 106746881 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GRAMD1C 54762 broad.mit.edu 36 3 115071137 115071137 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARHGAP31 57514 broad.mit.edu 36 3 120603348 120603348 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C3orf1 51300 broad.mit.edu 36 3 120702403 120702403 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STXBP5L 9515 broad.mit.edu 36 3 122456656 122456656 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POLQ 10721 broad.mit.edu 36 3 122637647 122637647 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC15A2 6565 broad.mit.edu 36 3 123125922 123125922 + Splice_Site SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KPNA1 3836 broad.mit.edu 36 3 123697967 123697967 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SEC22A 26984 broad.mit.edu 36 3 124425271 124425271 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYLK 4638 broad.mit.edu 36 3 124861222 124861222 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KALRN 8997 broad.mit.edu 36 3 125658135 125658135 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ITGB5 3693 broad.mit.edu 36 3 126074982 126074982 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAF1 5894 broad.mit.edu 36 3 12625428 12625428 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ACPP 55 broad.mit.edu 36 3 133539096 133539096 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SR140 23350 broad.mit.edu 36 3 144224201 144224201 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC6A6 6533 broad.mit.edu 36 3 14488832 14488832 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZIC4 84107 broad.mit.edu 36 3 148596319 148596319 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CPB1 1360 broad.mit.edu 36 3 150045143 150045143 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CLRN1 7401 broad.mit.edu 36 3 152128408 152128408 + 3'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MED12L 116931 broad.mit.edu 36 3 152557682 152557682 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MBNL1 4154 broad.mit.edu 36 3 153658603 153658603 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . VEPH1 79674 broad.mit.edu 36 3 158466155 158466155 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RSRC1 51319 broad.mit.edu 36 3 159744654 159744654 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GALNTL2 117248 broad.mit.edu 36 3 16217339 16217339 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PLD1 5337 broad.mit.edu 36 3 172887161 172887161 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PEX5L 51555 broad.mit.edu 36 3 181020331 181020331 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DCUN1D1 54165 broad.mit.edu 36 3 184161846 184161846 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MCF2L2 23101 broad.mit.edu 36 3 184380542 184380542 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HTR3C 170572 broad.mit.edu 36 3 185259075 185259075 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DVL3 1857 broad.mit.edu 36 3 185364742 185364742 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EIF4G1 1981 broad.mit.edu 36 3 185528196 185528196 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VPS8 23355 broad.mit.edu 36 3 186167203 186167203 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SENP2 59343 broad.mit.edu 36 3 186830256 186830256 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RFC4 5984 broad.mit.edu 36 3 187990739 187990739 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SST 6750 broad.mit.edu 36 3 188870776 188870776 + 5'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ATP13A5 344905 broad.mit.edu 36 3 194501682 194501682 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP13A5 344905 broad.mit.edu 36 3 194564585 194564585 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TFRC 7037 broad.mit.edu 36 3 197274116 197274116 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EFHB 151651 broad.mit.edu 36 3 19950519 19950519 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KAT2B 8850 broad.mit.edu 36 3 20116456 20116456 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OXSM 54995 broad.mit.edu 36 3 25810998 25810998 + 3'UTR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NEK10 152110 broad.mit.edu 36 3 27127786 27127786 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RBMS3 27303 broad.mit.edu 36 3 30004630 30004630 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RBMS3 27303 broad.mit.edu 36 3 30007565 30007565 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UBP1 7342 broad.mit.edu 36 3 33425184 33425184 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ARPP21 10777 broad.mit.edu 36 3 35723586 35723586 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STAC 6769 broad.mit.edu 36 3 36522231 36522231 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . WDR48 57599 broad.mit.edu 36 3 39082395 39082395 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ZNF619 285267 broad.mit.edu 36 3 40504747 40504747 + 3'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NKTR 4820 broad.mit.edu 36 3 42634056 42634056 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C3orf23 285343 broad.mit.edu 36 3 44378018 44378018 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KIF15 56992 broad.mit.edu 36 3 44842864 44842864 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SACM1L 22908 broad.mit.edu 36 3 45747789 45747789 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ITPR1 3708 broad.mit.edu 36 3 4701036 4701036 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SMARCC1 6599 broad.mit.edu 36 3 47754512 47754512 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COL7A1 1294 broad.mit.edu 36 3 48598505 48598505 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CELSR3 1951 broad.mit.edu 36 3 48663792 48663792 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DOCK3 1795 broad.mit.edu 36 3 50889929 50889929 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DOCK3 1795 broad.mit.edu 36 3 51272620 51272620 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IQCF2 389123 broad.mit.edu 36 3 51872430 51872430 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EDEM1 9695 broad.mit.edu 36 3 5230213 5230213 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CACNA1D 776 broad.mit.edu 36 3 53731548 53731548 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . WNT5A 7474 broad.mit.edu 36 3 55489988 55489988 + Splice_Site SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM116A 201627 broad.mit.edu 36 3 57619954 57619954 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FLNB 2317 broad.mit.edu 36 3 58129431 58129431 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PDHB 5162 broad.mit.edu 36 3 58388800 58388800 + 3'UTR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ADAMTS9 56999 broad.mit.edu 36 3 64594606 64594606 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBA3 9039 broad.mit.edu 36 3 69187372 69187372 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FOXP1 27086 broad.mit.edu 36 3 71132909 71132909 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SHQ1 55164 broad.mit.edu 36 3 72949237 72949237 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ROBO1 6091 broad.mit.edu 36 3 78777981 78777981 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CHMP2B 25978 broad.mit.edu 36 3 87385237 87385237 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CRYBG3 131544 broad.mit.edu 36 3 99078968 99078968 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GABRR3 200959 broad.mit.edu 36 3 99210582 99210582 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HAUS3 79441 broad.mit.edu 36 4 2203538 2203539 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024511 exon5 c.1726_1727insA p.F576fs . . . KLHL5 51088 broad.mit.edu 36 4 38791037 38791037 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015990 exon9 c.1829delT p.L610fs . . . H2AFZ 3015 broad.mit.edu 36 4 101089695 101089695 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADH6 130 broad.mit.edu 36 4 100350388 100350388 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000672 exon5 c.C441A p.F147L . . . ADH6 130 broad.mit.edu 36 4 100353791 100353791 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000672 exon3 c.A257C p.K86T . . . ADH1C 126 broad.mit.edu 36 4 100485430 100485430 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000669 exon4 c.G276A p.P92P . . . ADH7 131 broad.mit.edu 36 4 100569722 100569722 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000673 exon2 c.T146G p.V49G . . . RG9MTD2 93587 broad.mit.edu 36 4 100689281 100689281 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134665 exon8 c.C1007T p.S336F . . . RG9MTD2 93587 broad.mit.edu 36 4 100698306 100698306 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134665 exon3 c.C271A p.R91S . . . DAPP1 27071 broad.mit.edu 36 4 100980476 100980476 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014395 exon3 c.G232T p.D78Y . . . DNAJB14 79982 broad.mit.edu 36 4 101041225 101041225 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031723 exon8 c.C1123A p.L375I . . . CLNK 116449 broad.mit.edu 36 4 10118702 10118702 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052964 exon17 c.G963T p.E321D . . . SLC39A8 64116 broad.mit.edu 36 4 103403241 103403241 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135146 exon9 c.G1366T p.E456X . . . NFKB1 4790 broad.mit.edu 36 4 103670089 103670089 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165412 exon3 c.G106A p.A36T . . . CENPE 1062 broad.mit.edu 36 4 104249418 104249418 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001813 exon48 c.C8002A p.L2668I . . . CENPE 1062 broad.mit.edu 36 4 104276962 104276962 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001813 exon40 c.C6307T p.L2103F . . . CENPE 1062 broad.mit.edu 36 4 104299641 104299641 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001813 exon22 c.C2576T p.S859L . . . TACR3 6870 broad.mit.edu 36 4 104799008 104799008 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001059 exon2 c.T550G p.Y184D . . . RNF212 285498 broad.mit.edu 36 4 1063468 1063468 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194439 exon8 c.C473T p.S158L . . . NPNT 255743 broad.mit.edu 36 4 107081167 107081167 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184693 exon8 c.C778T p.R260X . . . TBCK 93627 broad.mit.edu 36 4 107373600 107373600 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163437 exon17 c.T1466G p.F489C . . . CYP2U1 113612 broad.mit.edu 36 4 109086007 109086007 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183075 exon2 c.C923A p.S308Y . . . OSTC 58505 broad.mit.edu 36 4 109798204 109798204 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021227 exon3 c.T383C p.V128A . . . COL25A1 84570 broad.mit.edu 36 4 110000300 110000300 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198721 exon23 c.G1281A p.E427E . . . HS3ST1 9957 broad.mit.edu 36 4 11009869 11009869 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005114 exon2 c.G859A p.E287K . . . CCDC109B 55013 broad.mit.edu 36 4 110823310 110823310 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017918 exon5 c.T575G p.I192S . . . CFI 3426 broad.mit.edu 36 4 110881691 110881691 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000204 exon13 c.C1559T p.A520V . . . RRH 10692 broad.mit.edu 36 4 110973840 110973840 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006583 exon2 c.C203T p.A68V . . . EGF 1950 broad.mit.edu 36 4 111129302 111129302 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001963 exon18 c.A2722G p.I908V . . . ENPEP 2028 broad.mit.edu 36 4 111629190 111629190 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001977 exon2 c.C689A p.S230Y . . . ENPEP 2028 broad.mit.edu 36 4 111683430 111683430 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001977 exon12 c.C1882T p.R628C . . . AP1AR 55435 broad.mit.edu 36 4 113401387 113401387 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128426 exon5 c.G202T p.E68X . . . ALPK1 80216 broad.mit.edu 36 4 113572418 113572418 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102406 exon11 c.G2266A p.D756N . . . Unknown 0 broad.mit.edu 36 4 113728086 113728086 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018392 exon12 c.C3576A p.V1192V . . . ANK2 287 broad.mit.edu 36 4 114495763 114495763 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001148 exon38 c.C6540T p.L2180L . . . ANK2 287 broad.mit.edu 36 4 114496856 114496856 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001148 exon38 c.G7633T p.E2545X . . . ANK2 287 broad.mit.edu 36 4 114501448 114501448 + Missense_Mutation SNP C T T rs72556376 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020977 exon38 c.C4447T p.R1483W . . . ANK2 287 broad.mit.edu 36 4 114508397 114508397 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020977 exon41 c.C5004A p.F1668L . . . ANK2 287 broad.mit.edu 36 4 114513981 114513981 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020977 exon44 c.A5531G p.N1844S . . . TRAM1L1 133022 broad.mit.edu 36 4 118225209 118225209 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152402 exon1 c.G789T p.V263V . . . TRAM1L1 133022 broad.mit.edu 36 4 118225743 118225743 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152402 exon1 c.C255A p.F85L . . . NDST3 9348 broad.mit.edu 36 4 119278664 119278664 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004784 exon5 c.G1232A p.G411D . . . PRSS12 8492 broad.mit.edu 36 4 119459014 119459014 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003619 exon5 c.G1117T p.E373X . . . SEC24D 9871 broad.mit.edu 36 4 119872068 119872068 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014822 exon21 c.C2719T p.R907C . . . SEC24D 9871 broad.mit.edu 36 4 119946446 119946446 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014822 exon7 c.G913T p.G305X . . . SEC24D 9871 broad.mit.edu 36 4 119956257 119956257 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014822 exon5 c.G470A p.R157Q . . . SYNPO2 171024 broad.mit.edu 36 4 120167370 120167370 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon3 c.T398C p.L133P . . . SYNPO2 171024 broad.mit.edu 36 4 120168032 120168032 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon3 c.C1060T p.R354W . . . SYNPO2 171024 broad.mit.edu 36 4 120171141 120171141 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon4 c.C1763T p.T588M . . . SYNPO2 171024 broad.mit.edu 36 4 120172185 120172185 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133477 exon4 c.C2807A p.A936D . . . MYOZ2 51778 broad.mit.edu 36 4 120291589 120291589 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016599 exon3 c.G191T p.R64I . . . MYOZ2 51778 broad.mit.edu 36 4 120326654 120326654 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016599 exon6 c.G646T p.D216Y . . . USP53 54532 broad.mit.edu 36 4 120407963 120407963 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019050 exon12 c.G1013A p.R338Q . . . FABP2 2169 broad.mit.edu 36 4 120461387 120461387 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000134 exon2 c.A126G p.T42T . . . PDE5A 8654 broad.mit.edu 36 4 120693180 120693180 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033437 exon9 c.A1213C p.K405Q . . . CTBP1 1487 broad.mit.edu 36 4 1212001 1212001 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001328 exon3 c.C326T p.S109L . . . C4orf31 79625 broad.mit.edu 36 4 122177338 122177338 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024574 exon4 c.C1238A p.P413H . . . C4orf31 79625 broad.mit.edu 36 4 122178163 122178163 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024574 exon4 c.C413T p.S138L . . . QRFPR 84109 broad.mit.edu 36 4 122481192 122481192 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198179 exon2 c.C364T p.P122S . . . BBS7 55212 broad.mit.edu 36 4 122988038 122988038 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176824 exon10 c.G1008T p.Q336H . . . BBS7 55212 broad.mit.edu 36 4 122999767 122999767 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176824 exon5 c.G358T p.D120Y . . . TRPC3 7222 broad.mit.edu 36 4 123040269 123040269 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003305 exon9 c.T2276C p.V759A . . . TRPC3 7222 broad.mit.edu 36 4 123043554 123043554 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003305 exon8 c.T2147G p.F716C . . . KIAA1109 84162 broad.mit.edu 36 4 123411805 123411805 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015312 exon45 c.C7676T p.S2559F . . . KIAA1109 84162 broad.mit.edu 36 4 123488252 123488252 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015312 exon74 c.C12997A p.P4333T . . . KIAA1109 84162 broad.mit.edu 36 4 123502644 123502644 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015312 exon84 c.C14810A p.S4937Y . . . ADAD1 132612 broad.mit.edu 36 4 123536882 123536882 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159295 exon6 c.G570T p.K190N . . . ADAD1 132612 broad.mit.edu 36 4 123551883 123551883 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159295 exon8 c.A851C p.K284T . . . IL21 59067 broad.mit.edu 36 4 123753491 123753491 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021803 exon4 c.G403T p.E135X . . . BBS12 166379 broad.mit.edu 36 4 123883480 123883480 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152618 exon2 c.C983A p.S328Y . . . ANKRD50 57182 broad.mit.edu 36 4 125809649 125809649 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167882 exon3 c.G3696A p.K1232K . . . ANKRD50 57182 broad.mit.edu 36 4 125811700 125811700 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167882 exon3 c.G1645A p.A549T . . . FAT4 79633 broad.mit.edu 36 4 126459351 126459351 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon1 c.G2335T p.V779L . . . FAT4 79633 broad.mit.edu 36 4 126459728 126459728 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon1 c.G2712T p.E904D . . . FAT4 79633 broad.mit.edu 36 4 126461043 126461043 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon1 c.G4027A p.D1343N . . . FAT4 79633 broad.mit.edu 36 4 126547540 126547540 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon3 c.G5363A p.R1788H . . . FAT4 79633 broad.mit.edu 36 4 126547620 126547620 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon3 c.C5443T p.R1815C . . . FAT4 79633 broad.mit.edu 36 4 126555855 126555855 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon5 c.A6287C p.K2096T . . . FAT4 79633 broad.mit.edu 36 4 126556026 126556026 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon5 c.T6458A p.I2153N . . . FAT4 79633 broad.mit.edu 36 4 126587122 126587122 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon8 c.C7418T p.T2473I . . . FAT4 79633 broad.mit.edu 36 4 126590399 126590399 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.G8778T p.E2926D . . . FAT4 79633 broad.mit.edu 36 4 126590533 126590533 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.T8912C p.I2971T . . . FAT4 79633 broad.mit.edu 36 4 126592270 126592270 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024582 exon9 c.G10649A p.S3550N . . . INTU 27152 broad.mit.edu 36 4 128847097 128847097 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015693 exon12 c.T1794G p.H598Q . . . HSPA4L 22824 broad.mit.edu 36 4 128967996 128967996 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014278 exon17 c.T2133C p.L711L . . . PLK4 10733 broad.mit.edu 36 4 129022454 129022454 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190799 exon2 c.C49A p.L17M . . . LARP1B 55132 broad.mit.edu 36 4 129319168 129319168 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018078 exon14 c.G1817A p.R606Q . . . SCLT1 132320 broad.mit.edu 36 4 130093408 130093408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144643 exon14 c.C1184T p.S395F . . . KIAA1530 57654 broad.mit.edu 36 4 1331968 1331968 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020894 exon2 c.A89G p.K30R . . . PCDH10 57575 broad.mit.edu 36 4 134292338 134292338 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020815 exon1 c.C1593T p.F531F . . . PCDH10 57575 broad.mit.edu 36 4 134292421 134292421 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020815 exon1 c.C1676A p.T559N . . . PCDH10 57575 broad.mit.edu 36 4 134303858 134303858 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032961 exon4 c.C3074T p.T1025M . . . PCDH18 54510 broad.mit.edu 36 4 138661782 138661782 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon4 c.C3259T p.P1087S . . . PCDH18 54510 broad.mit.edu 36 4 138671880 138671880 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.G813A p.T271T . . . PCDH18 54510 broad.mit.edu 36 4 138672011 138672011 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.G682T p.G228C . . . PCDH18 54510 broad.mit.edu 36 4 138672111 138672111 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.G582T p.K194N . . . PCDH18 54510 broad.mit.edu 36 4 138672229 138672229 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019035 exon1 c.G464A p.R155H . . . NAA15 80155 broad.mit.edu 36 4 140516987 140516987 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057175 exon16 c.G1966T p.E656X . . . RNF150 57484 broad.mit.edu 36 4 142108450 142108450 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020724 exon2 c.T512A p.I171N . . . INPP4B 8821 broad.mit.edu 36 4 143286544 143286544 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003866 exon19 c.A1619G p.D540G . . . USP38 84640 broad.mit.edu 36 4 144355100 144355100 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032557 exon9 c.C2521T p.L841L . . . GAB1 2549 broad.mit.edu 36 4 144579197 144579197 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207123 exon4 c.C1189T p.R397X . . . SMARCA5 8467 broad.mit.edu 36 4 144693772 144693772 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003601 exon24 c.G3144T p.K1048N . . . GYPE 2996 broad.mit.edu 36 4 145046093 145046093 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198682 exon1 c.C18A p.I6I . . . HHIP 64399 broad.mit.edu 36 4 145854929 145854929 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022475 exon9 c.A1526G p.Y509C . . . HHIP 64399 broad.mit.edu 36 4 145859543 145859543 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022475 exon11 c.T1745G p.I582S . . . ANAPC10 10393 broad.mit.edu 36 4 146136022 146136022 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014885 exon5 c.C511A p.P171T . . . ANAPC10 10393 broad.mit.edu 36 4 146136091 146136091 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014885 exon5 c.G442A p.G148R . . . OTUD4 54726 broad.mit.edu 36 4 146278106 146278106 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102653 exon21 c.G3076T p.V1026F . . . OTUD4 54726 broad.mit.edu 36 4 146282095 146282095 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102653 exon19 c.A1774G p.T592A . . . ZNF827 152485 broad.mit.edu 36 4 146919981 146919981 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178835 exon9 c.A2516G p.H839R . . . ZNF827 152485 broad.mit.edu 36 4 147043154 147043154 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178835 exon2 c.G707A p.R236Q . . . TTC29 83894 broad.mit.edu 36 4 148049687 148049687 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031956 exon5 c.C341A p.P114H . . . TTC29 83894 broad.mit.edu 36 4 148049833 148049833 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031956 exon5 c.G195T p.K65N . . . PRMT10 90826 broad.mit.edu 36 4 148798519 148798519 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138364 exon8 c.G1204T p.E402X . . . ARHGAP10 79658 broad.mit.edu 36 4 148987792 148987792 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024605 exon4 c.A353C p.K118T . . . NR3C2 4306 broad.mit.edu 36 4 149254763 149254763 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166104 exon7 c.C2390A p.S797Y . . . CC2D2A 57545 broad.mit.edu 36 4 15165819 15165819 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080522 exon21 c.C2513A p.S838X . . . CC2D2A 57545 broad.mit.edu 36 4 15190767 15190767 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080522 exon31 c.C3850T p.R1284C . . . LRBA 987 broad.mit.edu 36 4 151969142 151969142 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006726 exon30 c.A4811G p.D1604G . . . BST1 683 broad.mit.edu 36 4 15318348 15318348 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004334 exon3 c.T432C p.C144C . . . FBXW7 55294 broad.mit.edu 36 4 153551974 153551974 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033632 exon2 c.G432A p.T144T . . . TIGD4 201798 broad.mit.edu 36 4 153910705 153910705 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145720 exon2 c.C902T p.S301F . . . TIGD4 201798 broad.mit.edu 36 4 153911038 153911038 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145720 exon2 c.G569A p.R190Q . . . FHDC1 85462 broad.mit.edu 36 4 154094821 154094821 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033393 exon3 c.C563A p.S188Y . . . FHDC1 85462 broad.mit.edu 36 4 154101356 154101356 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033393 exon5 c.C760T p.R254W . . . TRIM2 23321 broad.mit.edu 36 4 154456587 154456587 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015271 exon8 c.G1768A p.D590N . . . KIAA0922 23240 broad.mit.edu 36 4 154743147 154743147 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015196 exon23 c.C2454A p.F818L . . . RNF175 285533 broad.mit.edu 36 4 154853145 154853145 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173662 exon8 c.C798T p.I266I . . . DCHS2 54798 broad.mit.edu 36 4 155377108 155377108 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon25 c.G6781T p.E2261X . . . DCHS2 54798 broad.mit.edu 36 4 155377442 155377442 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon25 c.C6447A p.F2149L . . . DCHS2 54798 broad.mit.edu 36 4 155379847 155379847 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon24 c.G6052T p.D2018Y . . . DCHS2 54798 broad.mit.edu 36 4 155456486 155456486 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon15 c.G3759A p.Q1253Q . . . DCHS2 54798 broad.mit.edu 36 4 155461158 155461158 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon14 c.G3478T p.D1160Y . . . DCHS2 54798 broad.mit.edu 36 4 155463061 155463061 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017639 exon13 c.G2683A p.A895T . . . PLRG1 5356 broad.mit.edu 36 4 155688426 155688426 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002669 exon3 c.G146A p.R49H . . . FGB 2244 broad.mit.edu 36 4 155710243 155710243 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005141 exon7 c.G1086T p.Q362H . . . FGA 2243 broad.mit.edu 36 4 155725352 155725352 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000508 exon6 c.T1975G p.F659V . . . FGG 2266 broad.mit.edu 36 4 155747311 155747311 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021870 exon8 c.C1125T p.Y375Y . . . FGG 2266 broad.mit.edu 36 4 155753163 155753163 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021870 exon1 c.C49A p.L17I . . . RBM46 166863 broad.mit.edu 36 4 155939662 155939662 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144979 exon4 c.A898G p.S300G . . . RBM46 166863 broad.mit.edu 36 4 155939918 155939918 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144979 exon4 c.C1154A p.S385Y . . . PROM1 8842 broad.mit.edu 36 4 15635938 15635938 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145847 exon5 c.G578A p.R193Q . . . PROM1 8842 broad.mit.edu 36 4 15644096 15644096 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145847 exon4 c.A411C p.R137R . . . GUCY1A3 2982 broad.mit.edu 36 4 156851220 156851220 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon6 c.C453T p.I151I . . . GUCY1A3 2982 broad.mit.edu 36 4 156851731 156851731 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon6 c.G964T p.E322X . . . GUCY1A3 2982 broad.mit.edu 36 4 156853813 156853813 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon7 c.C1200A p.L400L . . . GUCY1A3 2982 broad.mit.edu 36 4 156857882 156857882 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon8 c.C1694A p.S565Y . . . GUCY1A3 2982 broad.mit.edu 36 4 156870636 156870636 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130682 exon10 c.C1876T p.L626F . . . GUCY1B3 2983 broad.mit.edu 36 4 156945730 156945730 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000857 exon13 c.G1735A p.D579N . . . ACCN5 51802 broad.mit.edu 36 4 156992845 156992845 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017419 exon4 c.G659T p.R220I . . . TDO2 6999 broad.mit.edu 36 4 157055008 157055008 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005651 exon8 c.G810T p.E270D . . . PDGFC 56034 broad.mit.edu 36 4 157908531 157908531 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016205 exon5 c.C765A p.F255L . . . GLRB 2743 broad.mit.edu 36 4 158311326 158311326 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166060 exon10 c.T1490G p.L497X . . . GRIA2 2891 broad.mit.edu 36 4 158481923 158481923 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083619 exon12 c.C1902A p.I634I . . . GRIA2 2891 broad.mit.edu 36 4 158501628 158501628 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083619 exon14 c.G2308A p.A770T . . . RXFP1 59350 broad.mit.edu 36 4 159740030 159740030 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021634 exon4 c.C389A p.A130E . . . ETFDH 2110 broad.mit.edu 36 4 159825720 159825720 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004453 exon5 c.C505A p.H169N . . . PPID 5481 broad.mit.edu 36 4 159855978 159855978 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005038 exon6 c.G673A p.D225N . . . RAPGEF2 9693 broad.mit.edu 36 4 160483645 160483645 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014247 exon15 c.G2500A p.E834K . . . FSTL5 56884 broad.mit.edu 36 4 162621699 162621699 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128427 exon13 c.G1528T p.D510Y . . . FSTL5 56884 broad.mit.edu 36 4 162651006 162651006 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128427 exon11 c.G1330T p.E444X . . . FSTL5 56884 broad.mit.edu 36 4 162678870 162678870 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128427 exon10 c.C1207T p.R403C . . . NPY1R 4886 broad.mit.edu 36 4 164466074 164466074 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000909 exon3 c.G986A p.R329K . . . TKTL2 84076 broad.mit.edu 36 4 164613070 164613070 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032136 exon1 c.G1267A p.V423I . . . C4orf43 55319 broad.mit.edu 36 4 164654702 164654702 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018352 exon4 c.C181A p.H61N . . . MARCH1 55016 broad.mit.edu 36 4 164669586 164669586 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166373 exon8 c.C634A p.L212I . . . TRIM60 166655 broad.mit.edu 36 4 166180866 166180866 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152620 exon3 c.C192T p.S64S . . . KLHL2 11275 broad.mit.edu 36 4 166452075 166452075 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161521 exon11 c.C1259T p.S420F . . . CPE 1363 broad.mit.edu 36 4 166605001 166605001 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001873 exon2 c.A317C p.E106A . . . SLBP 7884 broad.mit.edu 36 4 1671114 1671114 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006527 exon5 c.G454A p.D152N . . . TLL1 7092 broad.mit.edu 36 4 167218622 167218622 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012464 exon18 c.G2432A p.R811Q . . . DDX60 55601 broad.mit.edu 36 4 169441183 169441183 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017631 exon13 c.A1711G p.K571E . . . DDX60 55601 broad.mit.edu 36 4 169445929 169445929 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017631 exon9 c.C1154A p.A385D . . . PALLD 23022 broad.mit.edu 36 4 169669257 169669257 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016081 exon2 c.C27A p.S9S . . . SH3RF1 57630 broad.mit.edu 36 4 170294340 170294340 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020870 exon5 c.T772C p.S258P . . . NEK1 4750 broad.mit.edu 36 4 170665985 170665985 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199397 exon21 c.C1822T p.R608C . . . NEK1 4750 broad.mit.edu 36 4 170695581 170695581 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199397 exon19 c.G1619A p.R540Q . . . NEK1 4750 broad.mit.edu 36 4 170713473 170713473 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199397 exon18 c.C1535T p.A512V . . . NEK1 4750 broad.mit.edu 36 4 170734772 170734772 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199397 exon12 c.C902A p.S301Y . . . CLCN3 1182 broad.mit.edu 36 4 170846789 170846789 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001829 exon5 c.G439T p.D147Y . . . CLCN3 1182 broad.mit.edu 36 4 170855038 170855038 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001829 exon9 c.T1141C p.Y381H . . . C4orf27 54969 broad.mit.edu 36 4 170889437 170889437 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017867 exon7 c.G902T p.G301V . . . GLRA3 8001 broad.mit.edu 36 4 175801547 175801547 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042543 exon9 c.C1315A p.L439I . . . GLRA3 8001 broad.mit.edu 36 4 175840554 175840554 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042543 exon6 c.G686C p.R229P . . . GLRA3 8001 broad.mit.edu 36 4 175886296 175886296 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042543 exon4 c.C396A p.F132L . . . ADAM29 11086 broad.mit.edu 36 4 176135024 176135024 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130705 exon3 c.G1773A p.K591K . . . GPM6A 2823 broad.mit.edu 36 4 176793130 176793130 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201591 exon7 c.G757T p.D253Y . . . WDR17 116966 broad.mit.edu 36 4 177283281 177283281 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170710 exon6 c.G643T p.E215X . . . WDR17 116966 broad.mit.edu 36 4 177330619 177330619 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170710 exon26 c.G3319T p.E1107X . . . WDR17 116966 broad.mit.edu 36 4 177337685 177337685 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170710 exon31 c.C3930T p.F1310F . . . SPATA4 132851 broad.mit.edu 36 4 177351726 177351726 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144644 exon2 c.G220T p.D74Y . . . ASB5 140458 broad.mit.edu 36 4 177379381 177379381 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080874 exon5 c.G589A p.E197K . . . SPCS3 60559 broad.mit.edu 36 4 177486463 177486463 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021928 exon5 c.G531A p.T177T . . . VEGFC 7424 broad.mit.edu 36 4 177842090 177842090 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005429 exon7 c.G1244T p.R415I . . . VEGFC 7424 broad.mit.edu 36 4 177845555 177845555 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005429 exon6 c.G925T p.E309X . . . NEIL3 55247 broad.mit.edu 36 4 178511857 178511857 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018248 exon8 c.A1441G p.N481D . . . ODZ3 55714 broad.mit.edu 36 4 183912988 183912988 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080477 exon21 c.A4474G p.N1492D . . . WWC2 80014 broad.mit.edu 36 4 184403593 184403593 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024949 exon6 c.C633T p.S211S . . . WWC2 80014 broad.mit.edu 36 4 184423246 184423246 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024949 exon12 c.C2031T p.F677F . . . CDKN2AIP 55602 broad.mit.edu 36 4 184605290 184605290 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017632 exon3 c.G1459T p.E487X . . . RWDD4 201965 broad.mit.edu 36 4 184799601 184799601 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152682 exon7 c.C549A p.G183G . . . C4orf41 60684 broad.mit.edu 36 4 184865018 184865018 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199053 exon28 c.C3120T p.T1040T . . . IRF2 3660 broad.mit.edu 36 4 185576744 185576744 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002199 exon4 c.G300T p.K100N . . . IRF2 3660 broad.mit.edu 36 4 185577682 185577682 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002199 exon3 c.C122T p.A41V . . . CASP3 836 broad.mit.edu 36 4 185790455 185790455 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032991 exon4 c.G268T p.D90Y . . . CCDC111 201973 broad.mit.edu 36 4 185836460 185836460 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152683 exon8 c.G925T p.D309Y . . . MLF1IP 79682 broad.mit.edu 36 4 185860528 185860528 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024629 exon9 c.G859T p.E287X . . . SLC25A4 291 broad.mit.edu 36 4 186303965 186303965 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001151 exon3 c.T657G p.S219R . . . KIAA1430 57587 broad.mit.edu 36 4 186349292 186349292 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020827 exon2 c.A53G p.D18G . . . SNX25 83891 broad.mit.edu 36 4 186417025 186417025 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031953 exon3 c.C52T p.L18L . . . LRP2BP 55805 broad.mit.edu 36 4 186535104 186535104 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018409 exon2 c.G169T p.G57X . . . CCDC110 256309 broad.mit.edu 36 4 186616783 186616783 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152775 exon6 c.C1952A p.S651Y . . . CCDC110 256309 broad.mit.edu 36 4 186617027 186617027 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152775 exon6 c.G1708T p.E570X . . . CCDC110 256309 broad.mit.edu 36 4 186617545 186617545 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152775 exon6 c.G1190A p.R397K . . . FAM149A 25854 broad.mit.edu 36 4 187321765 187321765 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001006655 exon9 c.C1027A p.L343I . . . FAT1 2195 broad.mit.edu 36 4 187762060 187762060 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon19 c.G10614T p.E3538D . . . FAT1 2195 broad.mit.edu 36 4 187777590 187777590 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon10 c.G7144A p.D2382N . . . FAT1 2195 broad.mit.edu 36 4 187779145 187779145 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon10 c.G5589A p.A1863A . . . FAT1 2195 broad.mit.edu 36 4 187866022 187866022 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005245 exon2 c.A1954C p.N652H . . . ZFP42 132625 broad.mit.edu 36 4 189160973 189160973 + Missense_Mutation SNP G T T rs12641972 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174900 exon4 c.G18T p.K6N . . . TRIML1 339976 broad.mit.edu 36 4 189298060 189298060 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178556 exon1 c.G354T p.Q118H . . . TUBB4Q 56604 broad.mit.edu 36 4 191141370 191141370 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020040 exon4 c.G605T p.R202I . . . WHSC2 7469 broad.mit.edu 36 4 1961263 1961263 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005663 exon3 c.G547A p.A183T . . . WHSC2 7469 broad.mit.edu 36 4 1963084 1963084 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005663 exon2 c.G400T p.E134X . . . SLIT2 9353 broad.mit.edu 36 4 20134608 20134608 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon13 c.C1258T p.R420W . . . SLIT2 9353 broad.mit.edu 36 4 20150166 20150166 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon19 c.T1837C p.L613L . . . SLIT2 9353 broad.mit.edu 36 4 20164678 20164678 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon26 c.T2714G p.F905C . . . SLIT2 9353 broad.mit.edu 36 4 20229503 20229503 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004787 exon37 c.G4363T p.G1455W . . . KCNIP4 80333 broad.mit.edu 36 4 20360386 20360386 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001035004 exon4 c.C240T p.F80F . . . GPR125 166647 broad.mit.edu 36 4 21998671 21998671 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145290 exon19 c.G3721A p.D1241N . . . DHX15 1665 broad.mit.edu 36 4 24165517 24165517 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001358 exon5 c.C1009T p.R337X . . . DHX15 1665 broad.mit.edu 36 4 24187120 24187120 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001358 exon2 c.G351A p.P117P . . . LGI2 55203 broad.mit.edu 36 4 24614529 24614529 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018176 exon8 c.G1280A p.R427Q . . . LGI2 55203 broad.mit.edu 36 4 24614807 24614807 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018176 exon8 c.C1002T p.I334I . . . SLC34A2 10568 broad.mit.edu 36 4 25286959 25286959 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006424 exon13 c.C1563A p.I521I . . . SEL1L3 23231 broad.mit.edu 36 4 25430585 25430585 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015187 exon8 c.G1366T p.E456X . . . CCKAR 886 broad.mit.edu 36 4 26099990 26099990 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000730 exon2 c.C327T p.F109F . . . NOP14 8602 broad.mit.edu 36 4 2921622 2921622 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003703 exon8 c.C1119T p.S373S . . . GRK4 2868 broad.mit.edu 36 4 3006960 3006960 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182982 exon13 c.C1319T p.A440V . . . PCDH7 5099 broad.mit.edu 36 4 30333654 30333654 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173523 exon1 c.C1512A p.V504V . . . HTT 3064 broad.mit.edu 36 4 3102897 3102897 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002111 exon15 c.G2073A p.S691S . . . ARAP2 116984 broad.mit.edu 36 4 35746239 35746239 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015230 exon33 c.C4800A p.S1600S . . . ARAP2 116984 broad.mit.edu 36 4 35829021 35829021 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015230 exon16 c.G2793A p.L931L . . . ARAP2 116984 broad.mit.edu 36 4 35838487 35838487 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015230 exon13 c.G2431T p.E811X . . . RELL1 768211 broad.mit.edu 36 4 37313032 37313032 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085399 exon5 c.C552T p.G184G . . . TBC1D1 23216 broad.mit.edu 36 4 37796155 37796155 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015173 exon17 c.T2909C p.F970S . . . TLR1 7096 broad.mit.edu 36 4 38476522 38476522 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003263 exon4 c.C326A p.S109Y . . . TLR6 10333 broad.mit.edu 36 4 38506239 38506239 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006068 exon2 c.T1251C p.S417S . . . TLR6 10333 broad.mit.edu 36 4 38506706 38506706 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006068 exon2 c.A784G p.T262A . . . TLR6 10333 broad.mit.edu 36 4 38507076 38507076 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006068 exon2 c.C414T p.I138I . . . FAM114A1 92689 broad.mit.edu 36 4 38556413 38556413 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138389 exon3 c.G319A p.E107K . . . KLHL5 51088 broad.mit.edu 36 4 38760112 38760112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015990 exon4 c.C976T p.R326C . . . RFC1 5981 broad.mit.edu 36 4 39005664 39005664 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002913 exon5 c.A439C p.N147H . . . RPL9 6133 broad.mit.edu 36 4 39134468 39134468 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000661 exon5 c.G344A p.R115Q . . . UGDH 7358 broad.mit.edu 36 4 39182432 39182432 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184700 exon9 c.G1062T p.K354N . . . UGDH 7358 broad.mit.edu 36 4 39182513 39182513 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184700 exon9 c.C981T p.L327L . . . PDS5A 23244 broad.mit.edu 36 4 39544921 39544921 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100399 exon23 c.C2597T p.A866V . . . N4BP2 55728 broad.mit.edu 36 4 39780306 39780306 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018177 exon4 c.C446T p.A149V . . . NSUN7 79730 broad.mit.edu 36 4 40495663 40495663 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024677 exon10 c.A1385C p.K462T . . . SLC30A9 10463 broad.mit.edu 36 4 41732058 41732058 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006345 exon7 c.G620T p.R207I . . . SLC30A9 10463 broad.mit.edu 36 4 41759793 41759793 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006345 exon11 c.G930A p.S310S . . . ATP8A1 10396 broad.mit.edu 36 4 42240710 42240710 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006095 exon20 c.G1703A p.R568Q . . . ATP8A1 10396 broad.mit.edu 36 4 42291106 42291106 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105529 exon7 c.G481T p.G161C . . . OTOP1 133060 broad.mit.edu 36 4 4241573 4241573 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177998 exon6 c.G1697A p.R566Q . . . ZNF721 170960 broad.mit.edu 36 4 427072 427072 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133474 exon3 c.G1184A p.G395D . . . ZBTB49 166793 broad.mit.edu 36 4 4355091 4355091 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145291 exon3 c.G627A p.Q209Q . . . ZBTB49 166793 broad.mit.edu 36 4 4373643 4373643 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145291 exon8 c.A1997G p.D666G . . . GABRG1 2565 broad.mit.edu 36 4 45761281 45761281 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173536 exon5 c.G559A p.E187K . . . GABRG1 2565 broad.mit.edu 36 4 45820603 45820603 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173536 exon1 c.A85G p.T29A . . . GABRA4 2557 broad.mit.edu 36 4 46661980 46661980 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000809 exon8 c.A898G p.T300A . . . GABRB1 2560 broad.mit.edu 36 4 47016981 47016981 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000812 exon5 c.G542T p.S181I . . . GABRB1 2560 broad.mit.edu 36 4 47103606 47103606 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000812 exon8 c.A986G p.Y329C . . . ATP10D 57205 broad.mit.edu 36 4 47209580 47209580 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020453 exon2 c.G266T p.R89I . . . ATP10D 57205 broad.mit.edu 36 4 47251620 47251620 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020453 exon11 c.G1756A p.D586N . . . ATP10D 57205 broad.mit.edu 36 4 47255033 47255033 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020453 exon12 c.C2420T p.S807L . . . ATP10D 57205 broad.mit.edu 36 4 47265647 47265647 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020453 exon16 c.G2890T p.E964X . . . CORIN 10699 broad.mit.edu 36 4 47320349 47320349 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006587 exon19 c.G2536A p.E846K . . . CORIN 10699 broad.mit.edu 36 4 47320507 47320507 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006587 exon19 c.G2378A p.R793H . . . CORIN 10699 broad.mit.edu 36 4 47323294 47323294 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006587 exon17 c.G2200T p.E734X . . . CORIN 10699 broad.mit.edu 36 4 47460310 47460310 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006587 exon4 c.G460A p.A154T . . . TEC 7006 broad.mit.edu 36 4 47846358 47846358 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003215 exon11 c.A979G p.I327V . . . FRYL 285527 broad.mit.edu 36 4 48219845 48219845 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015030 exon54 c.C7351T p.R2451C . . . CWH43 80157 broad.mit.edu 36 4 48688763 48688763 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025087 exon4 c.G410A p.R137H . . . CYTL1 54360 broad.mit.edu 36 4 5069587 5069587 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018659 exon3 c.C204A p.Y68X . . . LRRC66 339977 broad.mit.edu 36 4 52555958 52555958 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024611 exon4 c.G1987T p.D663Y . . . SGCB 6443 broad.mit.edu 36 4 52589776 52589776 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000232 exon4 c.C498T p.I166I . . . SCFD2 152579 broad.mit.edu 36 4 53434955 53434955 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152540 exon9 c.C1993T p.P665S . . . SCFD2 152579 broad.mit.edu 36 4 53874662 53874662 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152540 exon3 c.G1033A p.E345K . . . FIP1L1 81608 broad.mit.edu 36 4 54019711 54019711 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134937 exon17 c.G1616A p.R539Q . . . LNX1 84708 broad.mit.edu 36 4 54068327 54068327 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126328 exon4 c.T689C p.V230A . . . CHIC2 26511 broad.mit.edu 36 4 54571024 54571024 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012110 exon6 c.G493T p.D165Y . . . GSX2 170825 broad.mit.edu 36 4 54661343 54661343 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133267 exon1 c.G75A p.P25P . . . PDGFRA 5156 broad.mit.edu 36 4 54822025 54822025 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon3 c.G56T p.S19I . . . PDGFRA 5156 broad.mit.edu 36 4 54822218 54822218 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon3 c.G249A p.T83T . . . PDGFRA 5156 broad.mit.edu 36 4 54828250 54828250 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon6 c.T797C p.V266A . . . PDGFRA 5156 broad.mit.edu 36 4 54828354 54828354 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon6 c.G901T p.E301X . . . PDGFRA 5156 broad.mit.edu 36 4 54828535 54828535 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon7 c.G991T p.E331X . . . PDGFRA 5156 broad.mit.edu 36 4 54848444 54848444 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006206 exon19 c.C2653T p.L885F . . . PDGFRA 5156 broad.mit.edu 36 4 54856051 54856051 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006206 exon23 c.C3125T p.S1042L . . . KIT 3815 broad.mit.edu 36 4 55256515 55256515 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000222 exon2 c.G148A p.V50M . . . KIT 3815 broad.mit.edu 36 4 55286893 55286893 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000222 exon9 c.G1460A p.G487D . . . KDR 3791 broad.mit.edu 36 4 55671656 55671656 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002253 exon8 c.C1013A p.S338Y . . . SRD5A3 79644 broad.mit.edu 36 4 55925113 55925113 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024592 exon3 c.C480T p.V160V . . . EVC2 132884 broad.mit.edu 36 4 5637254 5637254 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147127 exon17 c.C3054T p.S1018S . . . EXOC1 55763 broad.mit.edu 36 4 56451214 56451214 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018261 exon12 c.T1444G p.S482A . . . EVC2 132884 broad.mit.edu 36 4 5678476 5678476 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147127 exon13 c.C1947A p.V649V . . . POLR2B 5431 broad.mit.edu 36 4 57571761 57571761 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000938 exon12 c.G1639T p.E547X . . . POLR2B 5431 broad.mit.edu 36 4 57576440 57576440 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000938 exon14 c.G1816A p.D606N . . . POLR2B 5431 broad.mit.edu 36 4 57576551 57576551 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000938 exon14 c.T1927A p.L643M . . . EVC 2121 broad.mit.edu 36 4 5781968 5781968 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153717 exon3 c.G334T p.A112S . . . EVC 2121 broad.mit.edu 36 4 5797930 5797930 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153717 exon7 c.A900C p.E300D . . . LPHN3 23284 broad.mit.edu 36 4 62483196 62483196 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015236 exon11 c.T1952G p.L651W . . . LPHN3 23284 broad.mit.edu 36 4 62592800 62592800 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015236 exon22 c.G3548A p.R1183Q . . . TECRL 253017 broad.mit.edu 36 4 64828507 64828507 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010874 exon12 c.A970T p.I324F . . . EPHA5 2044 broad.mit.edu 36 4 65913465 65913465 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004439 exon12 c.G2101T p.E701X . . . EPHA5 2044 broad.mit.edu 36 4 65915682 65915682 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004439 exon10 c.C1912A p.H638N . . . TMPRSS11D 9407 broad.mit.edu 36 4 68381677 68381677 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004262 exon7 c.G532T p.D178Y . . . TMPRSS11A 339967 broad.mit.edu 36 4 68459733 68459733 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182606 exon10 c.T1188C p.C396C . . . YTHDC1 91746 broad.mit.edu 36 4 68881671 68881671 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133370 exon5 c.C923A p.S308Y . . . YTHDC1 91746 broad.mit.edu 36 4 68886039 68886039 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133370 exon3 c.G305T p.R102I . . . UGT2B17 7367 broad.mit.edu 36 4 69099026 69099026 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077 exon5 c.T1277C p.L426S . . . UGT2B17 7367 broad.mit.edu 36 4 69100201 69100201 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077 exon4 c.G1029T p.K343N . . . KIAA0232 9778 broad.mit.edu 36 4 6914223 6914223 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014743 exon7 c.G1213A p.E405K . . . UGT2B7 7364 broad.mit.edu 36 4 69996964 69996964 + Missense_Mutation SNP T G G rs61361928 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001074 exon1 c.T137G p.L46R . . . UGT2B11 10720 broad.mit.edu 36 4 70114440 70114440 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001073 exon1 c.T590G p.V197G . . . UGT2B11 10720 broad.mit.edu 36 4 70114825 70114825 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001073 exon1 c.G205A p.A69T . . . UGT2B4 7363 broad.mit.edu 36 4 70381150 70381150 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021139 exon6 c.G1378A p.A460T . . . UGT2A1 10941 broad.mit.edu 36 4 70489876 70489876 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105677 exon6 c.G1390A p.E464K . . . UGT2A1 10941 broad.mit.edu 36 4 70539593 70539593 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105677 exon1 c.G331T p.E111X . . . SULT1B1 27284 broad.mit.edu 36 4 70630808 70630808 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014465 exon7 c.G778T p.G260W . . . TBC1D14 57533 broad.mit.edu 36 4 7063336 7063336 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001113361 exon11 c.A1574G p.D525G . . . SULT1B1 27284 broad.mit.edu 36 4 70634464 70634464 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014465 exon5 c.G483T p.E161D . . . CCDC96 257236 broad.mit.edu 36 4 7094446 7094446 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153376 exon1 c.C1121T p.A374V . . . GRPEL1 80273 broad.mit.edu 36 4 7113577 7113577 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025196 exon4 c.C567T p.G189G . . . SMR3B 10879 broad.mit.edu 36 4 71289987 71289987 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006685 exon3 c.G73T p.G25C . . . ENAM 10117 broad.mit.edu 36 4 71727581 71727581 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031889 exon9 c.G1574T p.R525I . . . ENAM 10117 broad.mit.edu 36 4 71728110 71728110 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031889 exon9 c.C2103A p.P701P . . . UTP3 57050 broad.mit.edu 36 4 71774225 71774225 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020368 exon1 c.C967T p.R323C . . . SLC4A4 8671 broad.mit.edu 36 4 72321188 72321188 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134742 exon2 c.G31A p.A11T . . . SLC4A4 8671 broad.mit.edu 36 4 72618834 72618834 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003759 exon15 c.C2175T p.F725F . . . NPFFR2 10886 broad.mit.edu 36 4 73213340 73213340 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144756 exon3 c.C177A p.F59L . . . ADAMTS3 9508 broad.mit.edu 36 4 73388640 73388640 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014243 exon17 c.G2282T p.G761V . . . COX18 285521 broad.mit.edu 36 4 74152647 74152647 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173827 exon2 c.C397T p.R133C . . . ANKRD17 26057 broad.mit.edu 36 4 74219832 74219832 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198889 exon15 c.G2347A p.A783T . . . AFM 173 broad.mit.edu 36 4 74576636 74576636 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001133 exon8 c.C1027T p.R343X . . . ZNF595 152687 broad.mit.edu 36 4 76287 76287 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182524 exon4 c.G892T p.A298S . . . RCHY1 25898 broad.mit.edu 36 4 76626897 76626897 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015436 exon9 c.C661A p.L221I . . . C4orf26 152816 broad.mit.edu 36 4 76708415 76708415 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178497 exon2 c.C135A p.I45I . . . C4orf26 152816 broad.mit.edu 36 4 76708510 76708510 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178497 exon2 c.G230A p.R77Q . . . CDKL2 8999 broad.mit.edu 36 4 76741385 76741385 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003948 exon9 c.A1080C p.K360N . . . G3BP2 9908 broad.mit.edu 36 4 76790631 76790631 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203505 exon11 c.C1091T p.T364I . . . G3BP2 9908 broad.mit.edu 36 4 76801884 76801884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203505 exon4 c.C232T p.R78C . . . ZNF595 152687 broad.mit.edu 36 4 77061 77061 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182524 exon4 c.A1666T p.K556X . . . NUP54 53371 broad.mit.edu 36 4 77274500 77274500 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017426 exon5 c.G562A p.D188N . . . CCDC158 339965 broad.mit.edu 36 4 77536448 77536448 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042784 exon3 c.G286A p.E96K . . . SORCS2 57537 broad.mit.edu 36 4 7776487 7776487 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020777 exon19 c.C2588T p.A863V . . . AFAP1 60312 broad.mit.edu 36 4 7862380 7862380 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198595 exon9 c.G915T p.K305N . . . FRAS1 80144 broad.mit.edu 36 4 79392704 79392704 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon5 c.C444T p.C148C . . . FRAS1 80144 broad.mit.edu 36 4 79604282 79604282 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon48 c.T6847C p.S2283P . . . FRAS1 80144 broad.mit.edu 36 4 79656063 79656063 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon66 c.C10261T p.R3421X . . . FRAS1 80144 broad.mit.edu 36 4 79659656 79659656 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon67 c.A10537G p.T3513A . . . FRAS1 80144 broad.mit.edu 36 4 79679531 79679531 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025074 exon73 c.C11358A p.H3786Q . . . NAA11 84779 broad.mit.edu 36 4 80465984 80465984 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032693 exon1 c.G72T p.E24D . . . GK2 2712 broad.mit.edu 36 4 80547314 80547314 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033214 exon1 c.T1065G p.S355S . . . ANTXR2 118429 broad.mit.edu 36 4 81118237 81118237 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145794 exon15 c.G1295A p.R432Q . . . FGF5 2250 broad.mit.edu 36 4 81426696 81426696 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004464 exon3 c.G653T p.R218I . . . BMP3 651 broad.mit.edu 36 4 82186629 82186629 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001201 exon2 c.C1030T p.R344W . . . PRKG2 5593 broad.mit.edu 36 4 82275385 82275385 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006259 exon13 c.G1724T p.R575I . . . SH3TC1 54436 broad.mit.edu 36 4 8284730 8284730 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018986 exon13 c.G3078T p.E1026D . . . ENOPH1 58478 broad.mit.edu 36 4 83588118 83588118 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021204 exon2 c.G106A p.E36K . . . ENOPH1 58478 broad.mit.edu 36 4 83595001 83595001 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021204 exon4 c.C492T p.F164F . . . THAP9 79725 broad.mit.edu 36 4 84046737 84046737 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024672 exon3 c.T513G p.I171M . . . THAP9 79725 broad.mit.edu 36 4 84057284 84057284 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024672 exon5 c.T895G p.L299V . . . HPSE 10855 broad.mit.edu 36 4 84450993 84450993 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166498 exon6 c.C748A p.H250N . . . HELQ 113510 broad.mit.edu 36 4 84569904 84569904 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133636 exon12 c.A2315G p.D772G . . . FAM175A 84142 broad.mit.edu 36 4 84610432 84610432 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139076 exon5 c.G424T p.E142X . . . AGPAT9 84803 broad.mit.edu 36 4 84738860 84738860 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032717 exon11 c.T1165C p.S389P . . . WDFY3 23001 broad.mit.edu 36 4 85831891 85831891 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon60 c.C9121A p.L3041I . . . WDFY3 23001 broad.mit.edu 36 4 85842576 85842576 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon56 c.C8550A p.F2850L . . . WDFY3 23001 broad.mit.edu 36 4 85853413 85853413 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon51 c.T7965A p.F2655L . . . WDFY3 23001 broad.mit.edu 36 4 85930031 85930031 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon22 c.C3541T p.R1181C . . . WDFY3 23001 broad.mit.edu 36 4 85969297 85969297 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon9 c.C840T p.V280V . . . WDFY3 23001 broad.mit.edu 36 4 85990132 85990132 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014991 exon5 c.T251A p.V84D . . . CPZ 8532 broad.mit.edu 36 4 8658626 8658626 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001014447 exon5 c.G720T p.E240D . . . MAPK10 5602 broad.mit.edu 36 4 87207966 87207966 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138981 exon5 c.G534T p.E178D . . . PTPN13 5783 broad.mit.edu 36 4 87890656 87890656 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080683 exon18 c.C2660T p.S887L . . . PTPN13 5783 broad.mit.edu 36 4 87911626 87911626 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080683 exon31 c.T5082C p.H1694H . . . DMP1 1758 broad.mit.edu 36 4 88803050 88803050 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079911 exon5 c.G1048T p.D350Y . . . PKD2 5311 broad.mit.edu 36 4 89208122 89208122 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000297 exon13 c.C2407T p.R803X . . . ABCG2 9429 broad.mit.edu 36 4 89232421 89232421 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004827 exon16 c.A1957G p.K653E . . . ABCG2 9429 broad.mit.edu 36 4 89253617 89253617 + Silent SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004827 exon9 c.T1056A p.L352L . . . ABCG2 9429 broad.mit.edu 36 4 89271329 89271329 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004827 exon5 c.C439T p.R147W . . . HERC6 55008 broad.mit.edu 36 4 89568857 89568857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165136 exon15 c.C1929T p.V643V . . . HERC5 51191 broad.mit.edu 36 4 89616166 89616166 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016323 exon12 c.T1544G p.V515G . . . HERC5 51191 broad.mit.edu 36 4 89634483 89634483 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016323 exon18 c.G2422T p.E808X . . . FAM13A 10144 broad.mit.edu 36 4 90131195 90131195 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014883 exon4 c.G557A p.R186H . . . GPRIN3 285513 broad.mit.edu 36 4 90388233 90388233 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198281 exon2 c.C2052T p.V684V . . . MMRN1 22915 broad.mit.edu 36 4 91067991 91067991 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007351 exon5 c.T978G p.D326E . . . MMRN1 22915 broad.mit.edu 36 4 91075364 91075364 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007351 exon6 c.G1510T p.E504X . . . MMRN1 22915 broad.mit.edu 36 4 91076630 91076630 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007351 exon6 c.G2776A p.E926K . . . MMRN1 22915 broad.mit.edu 36 4 91076891 91076891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007351 exon6 c.G3037A p.A1013T . . . FAM190A 401145 broad.mit.edu 36 4 91608482 91608482 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145065 exon5 c.G1678T p.E560X . . . TMSL3 7117 broad.mit.edu 36 4 91979085 91979085 + Missense_Mutation SNP C T T rs55773729 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183049 exon1 c.G127A p.E43K . . . TMEM175 84286 broad.mit.edu 36 4 935033 935033 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032326 exon5 c.C329T p.A110V . . . GRID2 2895 broad.mit.edu 36 4 94364855 94364855 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001510 exon7 c.A1031G p.D344G . . . ATOH1 474 broad.mit.edu 36 4 94970031 94970031 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005172 exon1 c.T931G p.L311V . . . SMARCAD1 56916 broad.mit.edu 36 4 95374181 95374181 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128429 exon4 c.G422T p.R141I . . . SMARCAD1 56916 broad.mit.edu 36 4 95418871 95418871 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128429 exon18 c.C2260A p.L754I . . . BMPR1B 658 broad.mit.edu 36 4 96289019 96289019 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001203 exon11 c.T1174G p.F392V . . . UNC5C 8633 broad.mit.edu 36 4 96343011 96343011 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003728 exon12 c.C2030T p.A677V . . . UNC5C 8633 broad.mit.edu 36 4 96418437 96418437 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003728 exon4 c.C590A p.A197D . . . PDHA2 5161 broad.mit.edu 36 4 96980915 96980915 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005390 exon1 c.G591A p.A197A . . . C4orf37 285555 broad.mit.edu 36 4 99283270 99283270 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_174952 exon1 c.G55A p.A19T . . . RAP1GDS1 5910 broad.mit.edu 36 4 99574201 99574201 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100427 exon13 c.T1532G p.L511R . . . TSPAN5 10098 broad.mit.edu 36 4 99622226 99622226 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005723 exon4 c.C403A p.R135R . . . TSPAN5 10098 broad.mit.edu 36 4 99798381 99798381 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005723 exon1 c.A20C p.K7T . . . PPP3CA 5530 broad.mit.edu 36 4 102220703 102220703 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBE2D3 7323 broad.mit.edu 36 4 103949928 103949928 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CENPE 1062 broad.mit.edu 36 4 104317664 104317664 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CASP6 839 broad.mit.edu 36 4 110835119 110835119 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PITX2 5308 broad.mit.edu 36 4 111773553 111773553 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANK2 287 broad.mit.edu 36 4 114451849 114451849 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NDST4 64579 broad.mit.edu 36 4 115970386 115970386 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NDST3 9348 broad.mit.edu 36 4 119396184 119396184 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MAD2L1 4085 broad.mit.edu 36 4 121207257 121207257 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BBS7 55212 broad.mit.edu 36 4 123002102 123002102 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LARP1B 55132 broad.mit.edu 36 4 129347022 129347022 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GYPA 2993 broad.mit.edu 36 4 145259311 145259311 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OTUD4 54726 broad.mit.edu 36 4 146296526 146296526 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FGG 2266 broad.mit.edu 36 4 155752815 155752815 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GUCY1A3 2982 broad.mit.edu 36 4 156848903 156848903 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM144 55314 broad.mit.edu 36 4 159376115 159376115 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AADAT 51166 broad.mit.edu 36 4 171222557 171222557 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FBXO8 26269 broad.mit.edu 36 4 175398818 175398818 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GPM6A 2823 broad.mit.edu 36 4 176793214 176793214 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TLR3 7098 broad.mit.edu 36 4 187242328 187242328 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM149A 25854 broad.mit.edu 36 4 187312798 187312798 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 4 24130938 24130938 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ANAPC4 29945 broad.mit.edu 36 4 25026264 25026264 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 4 26771582 26771582 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HTT 3064 broad.mit.edu 36 4 3152184 3152184 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM156 80008 broad.mit.edu 36 4 38666993 38666993 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RFC1 5981 broad.mit.edu 36 4 39004656 39004656 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UBE2K 3093 broad.mit.edu 36 4 39415536 39415536 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP8A1 10396 broad.mit.edu 36 4 42143424 42143424 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GABRG1 2565 broad.mit.edu 36 4 45780751 45780751 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COX7B2 170712 broad.mit.edu 36 4 46431712 46431712 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GABRA4 2557 broad.mit.edu 36 4 46661743 46661743 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NFXL1 152518 broad.mit.edu 36 4 47594733 47594733 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OCIAD2 132299 broad.mit.edu 36 4 48582254 48582254 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SPATA18 132671 broad.mit.edu 36 4 52639653 52639653 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SPATA18 132671 broad.mit.edu 36 4 52640849 52640849 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EVC2 132884 broad.mit.edu 36 4 5678369 5678369 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EVC2 132884 broad.mit.edu 36 4 5693137 5693137 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EVC 2121 broad.mit.edu 36 4 5771864 5771864 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 4 6020069 6020069 + IGR SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LPHN3 23284 broad.mit.edu 36 4 62131998 62131998 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TECRL 253017 broad.mit.edu 36 4 64923478 64923478 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBA6 55236 broad.mit.edu 36 4 68178768 68178768 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SYT14L 401135 broad.mit.edu 36 4 68611088 68611088 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UGT2B15 7366 broad.mit.edu 36 4 69570719 69570719 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SCARB2 950 broad.mit.edu 36 4 77319686 77319686 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRKG2 5593 broad.mit.edu 36 4 82307328 82307328 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AFF1 4299 broad.mit.edu 36 4 88254537 88254537 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PPM1K 152926 broad.mit.edu 36 4 89402767 89402767 + 3'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SNCA 6622 broad.mit.edu 36 4 90975714 90975714 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPR98 84059 broad.mit.edu 36 5 90015432 90015433 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032119 exon28 c.5938_5939insT p.I1980fs . . . GOLPH3 64083 broad.mit.edu 36 5 32162477 32162477 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022130 exon4 c.495delA p.K165fs . . . ST8SIA4 7903 broad.mit.edu 36 5 100175657 100175657 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005668 exon5 c.C873A p.F291L . . . ST8SIA4 7903 broad.mit.edu 36 5 100219895 100219895 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005668 exon4 c.G608A p.R203Q . . . ST8SIA4 7903 broad.mit.edu 36 5 100219964 100219964 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005668 exon4 c.A539C p.D180A . . . ST8SIA4 7903 broad.mit.edu 36 5 100259258 100259258 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005668 exon2 c.A244C p.R82R . . . SLCO4C1 353189 broad.mit.edu 36 5 101602904 101602904 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_180991 exon12 c.C1964A p.A655D . . . SLCO6A1 133482 broad.mit.edu 36 5 101783537 101783537 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173488 exon8 c.T1364C p.M455T . . . SLCO6A1 133482 broad.mit.edu 36 5 101862254 101862254 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173488 exon1 c.G194A p.R65Q . . . SLCO6A1 133482 broad.mit.edu 36 5 101862322 101862322 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173488 exon1 c.G126A p.S42S . . . PAM 5066 broad.mit.edu 36 5 102337859 102337859 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138822 exon14 c.C1303A p.L435I . . . PAM 5066 broad.mit.edu 36 5 102383400 102383400 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138822 exon22 c.A2439G p.E813E . . . GIN1 54826 broad.mit.edu 36 5 102451518 102451518 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017676 exon8 c.C1552T p.L518F . . . PPIP5K2 23262 broad.mit.edu 36 5 102536830 102536830 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015216 exon19 c.C2359T p.R787C . . . C5orf30 90355 broad.mit.edu 36 5 102639529 102639529 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033211 exon3 c.G10A p.D4N . . . CCT5 22948 broad.mit.edu 36 5 10309073 10309073 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012073 exon4 c.C338A p.A113D . . . MARCH6 10299 broad.mit.edu 36 5 10431927 10431927 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005885 exon3 c.G173T p.R58I . . . FER 2241 broad.mit.edu 36 5 108408392 108408392 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005246 exon15 c.C1826T p.A609V . . . FER 2241 broad.mit.edu 36 5 108549873 108549873 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005246 exon19 c.T2277C p.C759C . . . MAN2A1 4124 broad.mit.edu 36 5 109148369 109148369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002372 exon10 c.G1603A p.A535T . . . WDR36 134430 broad.mit.edu 36 5 110455968 110455968 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139281 exon1 c.G83T p.R28M . . . CAMK4 814 broad.mit.edu 36 5 110758351 110758351 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001744 exon5 c.C431T p.A144V . . . CAMK4 814 broad.mit.edu 36 5 110847781 110847781 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001744 exon11 c.C1140T p.G380G . . . CTNND2 1501 broad.mit.edu 36 5 11135937 11135937 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001332 exon16 c.G2659A p.A887T . . . CTNND2 1501 broad.mit.edu 36 5 11170571 11170571 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001332 exon13 c.C2268T p.I756I . . . APC 324 broad.mit.edu 36 5 112118491 112118491 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127510 exon3 c.C5A p.A2D . . . APC 324 broad.mit.edu 36 5 112191568 112191568 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon11 c.C1538T p.A513V . . . APC 324 broad.mit.edu 36 5 112198564 112198564 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon13 c.C1707T p.S569S . . . APC 324 broad.mit.edu 36 5 112203538 112203538 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C4294T p.R1432X APC,large_intestine,rectum,Substitution - Nonsense,0 . . APC 324 broad.mit.edu 36 5 112204176 112204176 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C4932T p.I1644I . . . APC 324 broad.mit.edu 36 5 112206476 112206476 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127511 exon14 c.C7232T p.S2411F . . . MCC 4163 broad.mit.edu 36 5 112446486 112446486 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085377 exon11 c.A1754T p.E585V . . . TSSK1B 83942 broad.mit.edu 36 5 112797719 112797719 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032028 exon1 c.G717A p.K239K . . . TSSK1B 83942 broad.mit.edu 36 5 112798306 112798306 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032028 exon1 c.G130A p.D44N . . . TSSK1B 83942 broad.mit.edu 36 5 112798419 112798419 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032028 exon1 c.T17C p.V6A . . . YTHDC2 64848 broad.mit.edu 36 5 112912191 112912191 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022828 exon11 c.G1550A p.R517H . . . YTHDC2 64848 broad.mit.edu 36 5 112917218 112917218 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022828 exon14 c.G1900A p.E634K . . . KCNN2 3781 broad.mit.edu 36 5 113859688 113859688 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021614 exon8 c.C1650T p.H550H . . . CTNND2 1501 broad.mit.edu 36 5 11399569 11399569 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001332 exon9 c.C1543A p.P515T . . . AP3S1 1176 broad.mit.edu 36 5 115205663 115205663 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001284 exon1 c.C30A p.N10K . . . AQPEP 206338 broad.mit.edu 36 5 115348252 115348252 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173800 exon3 c.G925A p.A309T . . . AQPEP 206338 broad.mit.edu 36 5 115374431 115374431 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173800 exon14 c.T2188G p.L730V . . . AQPEP 206338 broad.mit.edu 36 5 115379317 115379317 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173800 exon18 c.C2712T p.V904V . . . DMXL1 1657 broad.mit.edu 36 5 118513563 118513563 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005509 exon18 c.G4142A p.S1381N . . . TNFAIP8 25816 broad.mit.edu 36 5 118756911 118756911 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077654 exon2 c.T503G p.F168C . . . FAM170A 340069 broad.mit.edu 36 5 118996399 118996399 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182761 exon2 c.G128A p.G43D . . . ZNF474 133923 broad.mit.edu 36 5 121516182 121516182 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207317 exon2 c.A598G p.N200D . . . SNCAIP 9627 broad.mit.edu 36 5 121814816 121814816 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005460 exon10 c.C2375T p.A792V . . . SNX2 6643 broad.mit.edu 36 5 122167197 122167197 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003100 exon6 c.G633T p.K211N . . . CEP120 153241 broad.mit.edu 36 5 122713552 122713552 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166226 exon19 c.G2633T p.R878I . . . CEP120 153241 broad.mit.edu 36 5 122750124 122750124 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166226 exon10 c.G1489T p.D497Y . . . CEP120 153241 broad.mit.edu 36 5 122757072 122757072 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166226 exon6 c.A553G p.K185E . . . CSNK1G3 1456 broad.mit.edu 36 5 122954042 122954042 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001044723 exon9 c.A881C p.D294A . . . GRAMD3 65983 broad.mit.edu 36 5 125856508 125856508 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146321 exon15 c.A1284G p.I428M . . . PHAX 51808 broad.mit.edu 36 5 125988429 125988429 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032177 exon5 c.C1179A p.I393I . . . C5orf48 389320 broad.mit.edu 36 5 125999771 125999771 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207408 exon3 c.C344T p.S115L . . . LMNB1 4001 broad.mit.edu 36 5 126182609 126182609 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198557 exon6 c.A406C p.M136L . . . MEGF10 84466 broad.mit.edu 36 5 126799037 126799037 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032446 exon17 c.T2061G p.S687S . . . CTXN3 613212 broad.mit.edu 36 5 127021218 127021218 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127385 exon3 c.C106A p.L36M . . . FBN2 2201 broad.mit.edu 36 5 127639738 127639738 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001999 exon59 c.C7485T p.C2495C . . . FBN2 2201 broad.mit.edu 36 5 127699054 127699054 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001999 exon29 c.C3839T p.S1280L . . . FBN2 2201 broad.mit.edu 36 5 127894285 127894285 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001999 exon3 c.C338T p.P113L . . . ADAMTS19 171019 broad.mit.edu 36 5 129017950 129017950 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133638 exon14 c.T2211G p.L737L . . . ADAMTS19 171019 broad.mit.edu 36 5 129098681 129098681 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133638 exon22 c.C3452T p.T1151I . . . CHSY3 337876 broad.mit.edu 36 5 129548931 129548931 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175856 exon3 c.G2197T p.D733Y . . . RAPGEF6 51735 broad.mit.edu 36 5 130827774 130827774 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164389 exon18 c.C2339A p.A780D . . . PDLIM4 8572 broad.mit.edu 36 5 131635657 131635657 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003687 exon7 c.G829A p.E277K . . . RAD50 10111 broad.mit.edu 36 5 131972741 131972741 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005732 exon18 c.C2863A p.H955N . . . IL4 3565 broad.mit.edu 36 5 132043383 132043383 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000589 exon3 c.C262T p.R88C . . . KIF3A 11127 broad.mit.edu 36 5 132065724 132065724 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007054 exon13 c.G1757A p.R586Q . . . SHROOM1 134549 broad.mit.edu 36 5 132188643 132188643 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172700 exon5 c.A1000C p.T334P . . . PPP2CA 5515 broad.mit.edu 36 5 133564662 133564662 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002715 exon4 c.C489A p.I163I . . . SEC24A 10802 broad.mit.edu 36 5 134024863 134024863 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021982 exon2 c.A253C p.T85P . . . SEC24A 10802 broad.mit.edu 36 5 134035448 134035448 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021982 exon4 c.G790A p.D264N . . . SEC24A 10802 broad.mit.edu 36 5 134068930 134068930 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021982 exon17 c.C2455T p.R819C . . . DDX46 9879 broad.mit.edu 36 5 134130556 134130556 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014829 exon3 c.G257A p.R86Q . . . DDX46 9879 broad.mit.edu 36 5 134141168 134141168 + Missense_Mutation SNP G A A rs10447293 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014829 exon6 c.G619A p.E207K . . . CATSPER3 347732 broad.mit.edu 36 5 134333590 134333590 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178019 exon2 c.T161G p.I54R . . . TGFBI 7045 broad.mit.edu 36 5 135416544 135416544 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000358 exon8 c.C963T p.I321I . . . SMAD5 4090 broad.mit.edu 36 5 135524679 135524679 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001419 exon5 c.T639C p.S213S . . . TRPC7 57113 broad.mit.edu 36 5 135615348 135615348 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020389 exon6 c.C1467T p.R489R . . . TRPC7 57113 broad.mit.edu 36 5 135720733 135720733 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020389 exon2 c.C242A p.A81D . . . KLHL3 26249 broad.mit.edu 36 5 137041146 137041146 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017415 exon6 c.C623A p.S208Y . . . PKD2L2 27039 broad.mit.edu 36 5 137272396 137272396 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014386 exon8 c.C1190A p.S397X . . . FAM13B 51306 broad.mit.edu 36 5 137312551 137312551 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101800 exon17 c.G2086T p.D696Y . . . WNT8A 7478 broad.mit.edu 36 5 137454285 137454285 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058244 exon6 c.C680T p.A227V . . . NME5 8382 broad.mit.edu 36 5 137502272 137502272 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003551 exon2 c.A97G p.I33V . . . KIF20A 10112 broad.mit.edu 36 5 137548504 137548504 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005733 exon14 c.A1793G p.E598G . . . CDC23 8697 broad.mit.edu 36 5 137553433 137553433 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004661 exon14 c.G1486T p.D496Y . . . CDC25C 995 broad.mit.edu 36 5 137653107 137653107 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001790 exon10 c.G909T p.K303N . . . KDM3B 51780 broad.mit.edu 36 5 137754665 137754665 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016604 exon8 c.C1445A p.P482H . . . KDM3B 51780 broad.mit.edu 36 5 137755009 137755009 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016604 exon8 c.T1789A p.S597T . . . KDM3B 51780 broad.mit.edu 36 5 137784507 137784507 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016604 exon15 c.A3929G p.D1310G . . . KDM3B 51780 broad.mit.edu 36 5 137793468 137793468 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016604 exon21 c.T4808G p.I1603S . . . CTNNA1 1495 broad.mit.edu 36 5 138188186 138188186 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001903 exon6 c.G657A p.P219P . . . CTNNA1 1495 broad.mit.edu 36 5 138288953 138288953 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001903 exon13 c.T1857C p.Y619Y . . . CTNNA1 1495 broad.mit.edu 36 5 138297667 138297667 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001903 exon18 c.A2711G p.D904G . . . MATR3 9782 broad.mit.edu 36 5 138671895 138671895 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194955 exon2 c.T892G p.L298V . . . MATR3 9782 broad.mit.edu 36 5 138682614 138682614 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001194955 exon8 c.G1427T p.R476I . . . DNAH5 1767 broad.mit.edu 36 5 13873543 13873543 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon41 c.G6753A p.T2251T . . . DNAH5 1767 broad.mit.edu 36 5 13903782 13903782 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon31 c.T5093C p.I1698T . . . DNAH5 1767 broad.mit.edu 36 5 13903872 13903872 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon31 c.G5003T p.R1668L . . . DNAH5 1767 broad.mit.edu 36 5 13915815 13915815 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon29 c.A4638G p.Q1546Q . . . DNAH5 1767 broad.mit.edu 36 5 13917623 13917623 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon28 c.G4479A p.E1493E . . . PSD2 84249 broad.mit.edu 36 5 139196728 139196728 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032289 exon10 c.G1552A p.V518I . . . DNAH5 1767 broad.mit.edu 36 5 13936178 13936178 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001369 exon20 c.G3009T p.K1003N . . . PFDN1 5201 broad.mit.edu 36 5 139660265 139660265 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002622 exon2 c.G120A p.T40T . . . HBEGF 1839 broad.mit.edu 36 5 139695729 139695729 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001945 exon4 c.A466G p.T156A . . . DNAH5 1767 broad.mit.edu 36 5 13973716 13973716 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001369 exon6 c.G671A p.R224Q . . . ANKHD1-EIF4EBP3 404734 broad.mit.edu 36 5 139800845 139800845 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024668 exon5 c.G847T p.G283C . . . ANKHD1-EIF4EBP3 404734 broad.mit.edu 36 5 139869946 139869946 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017747 exon22 c.G4100A p.R1367H . . . TMCO6 55374 broad.mit.edu 36 5 140003561 140003561 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018502 exon9 c.G931A p.V311M . . . PCDHA1 56147 broad.mit.edu 36 5 140147039 140147039 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031411 exon1 c.G980T p.S327I . . . PCDHA1 56147 broad.mit.edu 36 5 140147355 140147355 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031411 exon1 c.G1296A p.S432S . . . PCDHA1 56147 broad.mit.edu 36 5 140147568 140147568 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031411 exon1 c.G1509A p.A503A . . . PCDHA2 56146 broad.mit.edu 36 5 140155301 140155301 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018905 exon1 c.G568A p.E190K . . . PCDHA2 56146 broad.mit.edu 36 5 140155816 140155816 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018905 exon1 c.G1083T p.E361D . . . PCDHA2 56146 broad.mit.edu 36 5 140156450 140156450 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018905 exon1 c.G1717A p.A573T . . . PCDHA2 56146 broad.mit.edu 36 5 140156928 140156928 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018905 exon1 c.G2195A p.R732H . . . PCDHA3 56145 broad.mit.edu 36 5 140161111 140161111 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031497 exon1 c.G145A p.A49T . . . PCDHA3 56145 broad.mit.edu 36 5 140161517 140161517 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031497 exon1 c.G551T p.R184I . . . PCDHA5 56143 broad.mit.edu 36 5 140183117 140183117 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031501 exon1 c.G1573A p.E525K . . . PCDHA6 56142 broad.mit.edu 36 5 140188986 140188986 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031849 exon1 c.G1126A p.D376N . . . PCDHA6 56142 broad.mit.edu 36 5 140190090 140190090 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018909 exon1 c.G2230A p.A744T . . . PCDHA8 56140 broad.mit.edu 36 5 140202978 140202978 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031856 exon1 c.G1888A p.E630K . . . PCDHA9 9752 broad.mit.edu 36 5 140209222 140209222 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014005 exon1 c.G958T p.V320F . . . PCDHA9 9752 broad.mit.edu 36 5 140210236 140210236 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014005 exon1 c.G1972A p.A658T . . . PCDHA10 56139 broad.mit.edu 36 5 140215964 140215964 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018901 exon1 c.G147T p.Q49H . . . PCDHA11 56138 broad.mit.edu 36 5 140229683 140229683 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031861 exon1 c.G811A p.E271K . . . PCDHA12 56137 broad.mit.edu 36 5 140236052 140236052 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031864 exon1 c.G811A p.E271K . . . PCDHA13 56136 broad.mit.edu 36 5 140243687 140243687 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031865 exon1 c.G1650A p.T550T . . . PCDHAC1 56135 broad.mit.edu 36 5 140287676 140287676 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031882 exon1 c.G1015A p.E339K . . . PCDHAC2 56134 broad.mit.edu 36 5 140327114 140327114 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018899 exon1 c.C579T p.F193F . . . PCDHB2 56133 broad.mit.edu 36 5 140455030 140455030 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018936 exon1 c.C472T p.R158C . . . PCDHB3 56132 broad.mit.edu 36 5 140461369 140461369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018937 exon1 c.G952A p.D318N . . . PCDHB4 56131 broad.mit.edu 36 5 140482568 140482568 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018938 exon1 c.A804C p.I268I . . . PCDHB4 56131 broad.mit.edu 36 5 140483581 140483581 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018938 exon1 c.T1817C p.L606P . . . PCDHB5 26167 broad.mit.edu 36 5 140495351 140495351 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015669 exon1 c.G151T p.D51Y . . . PCDHB5 26167 broad.mit.edu 36 5 140496417 140496417 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015669 exon1 c.G1217T p.R406I . . . PCDHB5 26167 broad.mit.edu 36 5 140496663 140496663 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015669 exon1 c.C1463T p.S488L . . . PCDHB6 56130 broad.mit.edu 36 5 140510626 140510626 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018939 exon1 c.G604A p.E202K . . . PCDHB6 56130 broad.mit.edu 36 5 140511861 140511861 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018939 exon1 c.C1839T p.F613F . . . PCDHB7 56129 broad.mit.edu 36 5 140532836 140532836 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018940 exon1 c.C236T p.S79L . . . PCDHB7 56129 broad.mit.edu 36 5 140534544 140534544 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018940 exon1 c.C1944T p.G648G . . . PCDHB8 56128 broad.mit.edu 36 5 140539057 140539057 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019120 exon1 c.G1258A p.V420I . . . PCDHB16 57717 broad.mit.edu 36 5 140544452 140544452 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020957 exon1 c.C2134T p.R712W . . . PCDHB9 56127 broad.mit.edu 36 5 140548451 140548451 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019119 exon1 c.T1375C p.S459P . . . PCDHB9 56127 broad.mit.edu 36 5 140549246 140549246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019119 exon1 c.G2170A p.A724T . . . PCDHB10 56126 broad.mit.edu 36 5 140552437 140552437 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018930 exon1 c.C128A p.S43Y . . . PCDHB10 56126 broad.mit.edu 36 5 140553175 140553175 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018930 exon1 c.G866A p.R289Q . . . PCDHB11 56125 broad.mit.edu 36 5 140559828 140559828 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018931 exon1 c.C297T p.I99I . . . PCDHB11 56125 broad.mit.edu 36 5 140560174 140560174 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018931 exon1 c.C643A p.L215M . . . PCDHB11 56125 broad.mit.edu 36 5 140560264 140560264 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018931 exon1 c.G733A p.A245T . . . PCDHB11 56125 broad.mit.edu 36 5 140561433 140561433 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018931 exon1 c.C1902T p.D634D . . . PCDHB12 56124 broad.mit.edu 36 5 140569112 140569112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018932 exon1 c.C449T p.A150V . . . PCDHB12 56124 broad.mit.edu 36 5 140569242 140569242 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018932 exon1 c.G579A p.E193E . . . PCDHB13 56123 broad.mit.edu 36 5 140575967 140575967 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018933 exon1 c.G2088A p.S696S . . . PCDHB14 56122 broad.mit.edu 36 5 140584314 140584314 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018934 exon1 c.G1053A p.S351S . . . PCDHB15 56121 broad.mit.edu 36 5 140606271 140606271 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018935 exon1 c.C941T p.S314L . . . SLC25A2 83884 broad.mit.edu 36 5 140662883 140662883 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031947 exon1 c.A734C p.K245T . . . TAF7 6879 broad.mit.edu 36 5 140678868 140678868 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005642 exon1 c.G928A p.E310K . . . PCDHGA1 56114 broad.mit.edu 36 5 140690621 140690621 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031993 exon1 c.C186T p.G62G . . . PCDHGA1 56114 broad.mit.edu 36 5 140690866 140690866 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031993 exon1 c.A431C p.E144A . . . PCDHGA1 56114 broad.mit.edu 36 5 140692525 140692525 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031993 exon1 c.C2090T p.A697V . . . PCDHGA2 56113 broad.mit.edu 36 5 140699270 140699270 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032009 exon1 c.G548A p.R183Q . . . PCDHGA2 56113 broad.mit.edu 36 5 140700026 140700026 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032009 exon1 c.A1304G p.D435G . . . PCDHGA2 56113 broad.mit.edu 36 5 140700610 140700610 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032009 exon1 c.C1888T p.R630X . . . PCDHGB1 56104 broad.mit.edu 36 5 140710897 140710897 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018922 exon1 c.G886A p.D296N . . . PCDHGB2 56103 broad.mit.edu 36 5 140720204 140720204 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032096 exon1 c.C318T p.F106F . . . PCDHGA6 56109 broad.mit.edu 36 5 140734208 140734208 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032086 exon1 c.A374G p.D125G . . . PCDHGA7 56108 broad.mit.edu 36 5 140744303 140744303 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032087 exon1 c.C1653T p.F551F . . . PCDHGA8 9708 broad.mit.edu 36 5 140753117 140753117 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032088 exon1 c.G553T p.G185X . . . PCDHGA8 9708 broad.mit.edu 36 5 140754072 140754072 + Missense_Mutation SNP C T T rs11575959 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032088 exon1 c.C1508T p.S503L . . . PCDHGA8 9708 broad.mit.edu 36 5 140754450 140754450 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032088 exon1 c.C1886T p.A629V . . . PCDHGB6 56100 broad.mit.edu 36 5 140768793 140768793 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.C840A p.Y280X . . . PCDHGB6 56100 broad.mit.edu 36 5 140768965 140768965 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.C1012A p.L338I . . . PCDHGB6 56100 broad.mit.edu 36 5 140769818 140769818 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.G1865A p.R622H . . . PCDHGB6 56100 broad.mit.edu 36 5 140770100 140770100 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018926 exon1 c.G2147A p.R716Q . . . PCDHGA10 56106 broad.mit.edu 36 5 140773237 140773237 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032090 exon1 c.C311T p.A104V . . . PCDHGB7 56099 broad.mit.edu 36 5 140778868 140778868 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032101 exon1 c.G1258A p.V420I . . . PCDHGA11 56105 broad.mit.edu 36 5 140783192 140783192 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018914 exon1 c.G2214A p.T738T . . . PCDHGC4 56098 broad.mit.edu 36 5 140847048 140847048 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018928 exon1 c.C2124T p.F708F . . . PCDH12 51294 broad.mit.edu 36 5 141316873 141316873 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016580 exon1 c.C728T p.A243V . . . NDFIP1 80762 broad.mit.edu 36 5 141491581 141491581 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030571 exon2 c.G88T p.E30X . . . FGF1 2246 broad.mit.edu 36 5 141973773 141973773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144934 exon3 c.G104A p.G35D . . . NR3C1 2908 broad.mit.edu 36 5 142760572 142760572 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018077 exon2 c.C26A p.P9H . . . TRIO 7204 broad.mit.edu 36 5 14340144 14340144 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon4 c.A512C p.N171T . . . TRIO 7204 broad.mit.edu 36 5 14389771 14389771 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon11 c.C1981T p.R661W . . . PRELID2 153768 broad.mit.edu 36 5 145177810 145177810 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138492 exon5 c.G121A p.V41M . . . TRIO 7204 broad.mit.edu 36 5 14530049 14530049 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon41 c.C6130A p.L2044I . . . LARS 51520 broad.mit.edu 36 5 145512974 145512974 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020117 exon13 c.G1240A p.A414T . . . LARS 51520 broad.mit.edu 36 5 145537417 145537417 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020117 exon2 c.G11T p.R4I . . . TRIO 7204 broad.mit.edu 36 5 14557649 14557649 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon55 c.C8559T p.V2853V . . . TRIO 7204 broad.mit.edu 36 5 14561315 14561315 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007118 exon57 c.C9078T p.F3026F . . . RBM27 54439 broad.mit.edu 36 5 145621472 145621472 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018989 exon13 c.G2100A p.Q700Q . . . POU4F3 5459 broad.mit.edu 36 5 145700016 145700016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002700 exon2 c.G833A p.R278H . . . PPP2R2B 5521 broad.mit.edu 36 5 145960206 145960206 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181675 exon8 c.G801A p.E267E . . . DPYSL3 1809 broad.mit.edu 36 5 146760534 146760534 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197294 exon10 c.G1366A p.A456T . . . DPYSL3 1809 broad.mit.edu 36 5 146778212 146778212 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197294 exon3 c.A646G p.T216A . . . JAKMIP2 9832 broad.mit.edu 36 5 146991237 146991237 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014790 exon14 c.C1807A p.L603I . . . JAKMIP2 9832 broad.mit.edu 36 5 146999488 146999488 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014790 exon10 c.G1430T p.R477I . . . JAKMIP2 9832 broad.mit.edu 36 5 147004718 147004718 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014790 exon6 c.A971C p.K324T . . . FAM105B 90268 broad.mit.edu 36 5 14726797 14726797 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138348 exon2 c.G199T p.E67X . . . SPINK5 11005 broad.mit.edu 36 5 147454207 147454207 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127699 exon9 c.G764T p.G255V . . . SPINK5 11005 broad.mit.edu 36 5 147457655 147457655 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001127699 exon11 c.G915T p.K305N . . . SPINK5 11005 broad.mit.edu 36 5 147457743 147457743 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127699 exon11 c.G1003T p.A335S . . . SPINK5 11005 broad.mit.edu 36 5 147478195 147478195 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001127699 exon23 c.C2115T p.D705D . . . SPINK5 11005 broad.mit.edu 36 5 147485571 147485571 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127698 exon30 c.C2922A p.F974L . . . HTR4 3360 broad.mit.edu 36 5 147883072 147883072 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040169 exon4 c.C384A p.V128V . . . SH3TC2 79628 broad.mit.edu 36 5 148387758 148387758 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024577 exon11 c.C1730T p.A577V . . . AFAP1L1 134265 broad.mit.edu 36 5 148675667 148675667 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152406 exon10 c.C1111A p.H371N . . . ARHGEF37 389337 broad.mit.edu 36 5 148986907 148986907 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001669 exon11 c.A1540G p.T514A . . . PDE6A 5145 broad.mit.edu 36 5 149259143 149259143 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000440 exon9 c.G1251A p.E417E . . . PDE6A 5145 broad.mit.edu 36 5 149294330 149294330 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000440 exon2 c.G619T p.D207Y . . . PDE6A 5145 broad.mit.edu 36 5 149304386 149304386 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000440 exon1 c.C44T p.S15L . . . SLC26A2 1836 broad.mit.edu 36 5 149337666 149337666 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000112 exon2 c.A258T p.K86N . . . SLC26A2 1836 broad.mit.edu 36 5 149337980 149337980 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000112 exon2 c.C572T p.A191V . . . SLC26A2 1836 broad.mit.edu 36 5 149340235 149340235 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000112 exon3 c.A886G p.N296D . . . SLC26A2 1836 broad.mit.edu 36 5 149341510 149341510 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000112 exon3 c.G2161A p.V721I . . . CSF1R 1436 broad.mit.edu 36 5 149433060 149433060 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005211 exon7 c.A1079G p.Y360C . . . PDGFRB 5159 broad.mit.edu 36 5 149494736 149494736 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002609 exon4 c.A401G p.E134G . . . CAMK2A 815 broad.mit.edu 36 5 149582786 149582786 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015981 exon18 c.C1425T p.I475I . . . SYNPO 11346 broad.mit.edu 36 5 150008999 150008999 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007286 exon2 c.G969T p.E323D . . . ANXA6 309 broad.mit.edu 36 5 150481931 150481931 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001155 exon17 c.C1317T p.Y439Y . . . ANXA6 309 broad.mit.edu 36 5 150489242 150489242 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001155 exon12 c.C837A p.V279V . . . SLC36A3 285641 broad.mit.edu 36 5 150637312 150637312 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145017 exon11 c.C1371T p.I457I . . . FAT2 2196 broad.mit.edu 36 5 150872044 150872044 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon20 c.C11780G p.A3927G . . . FAT2 2196 broad.mit.edu 36 5 150910382 150910382 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon7 c.C4540T p.L1514F . . . FAT2 2196 broad.mit.edu 36 5 150926940 150926940 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001447 exon1 c.G1746A p.S582S . . . GLRA1 2741 broad.mit.edu 36 5 151219566 151219566 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000171 exon4 c.G449A p.R150Q . . . NMUR2 56923 broad.mit.edu 36 5 151764810 151764810 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020167 exon1 c.G58T p.D20Y . . . GRIA1 2890 broad.mit.edu 36 5 153046077 153046077 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114183 exon8 c.C1129T p.R377X . . . GRIA1 2890 broad.mit.edu 36 5 153065751 153065751 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114183 exon11 c.T1754G p.F585C . . . HAND1 9421 broad.mit.edu 36 5 153837352 153837352 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004821 exon1 c.G410A p.R137H . . . KIF4B 285643 broad.mit.edu 36 5 154373985 154373985 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099293 exon1 c.G373A p.E125K . . . KIF4B 285643 broad.mit.edu 36 5 154377070 154377070 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099293 exon1 c.G3458T p.G1153V . . . FAM71B 153745 broad.mit.edu 36 5 156522523 156522523 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130899 exon2 c.C1331A p.S444Y . . . FAM71B 153745 broad.mit.edu 36 5 156522730 156522730 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130899 exon2 c.C1124T p.A375V . . . CYFIP2 26999 broad.mit.edu 36 5 156656271 156656271 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037332 exon5 c.G298A p.E100K . . . CLINT1 9685 broad.mit.edu 36 5 157151343 157151343 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014666 exon10 c.C1326A p.F442L . . . UBLCP1 134510 broad.mit.edu 36 5 158644510 158644510 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145049 exon11 c.G950A p.G317E . . . IL12B 3593 broad.mit.edu 36 5 158678379 158678379 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002187 exon6 c.T798C p.H266H . . . IL12B 3593 broad.mit.edu 36 5 158682022 158682023 + Missense_Mutation DNP GT AC AC novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 GT GT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002187 exon4 c.439_440GT . . . NA PTTG1 9232 broad.mit.edu 36 5 159783896 159783896 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004219 exon4 c.C351A p.F117L . . . GABRB2 2561 broad.mit.edu 36 5 160819349 160819349 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021911 exon5 c.C317A p.T106N . . . GABRA6 2559 broad.mit.edu 36 5 161048636 161048636 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000811 exon4 c.A329C p.K110T . . . GABRA6 2559 broad.mit.edu 36 5 161061150 161061150 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000811 exon9 c.C1155T p.S385S . . . GABRA1 2554 broad.mit.edu 36 5 161242213 161242213 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127646 exon7 c.G631T p.D211Y . . . GABRA1 2554 broad.mit.edu 36 5 161255450 161255450 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127646 exon9 c.A1057C p.K353Q . . . MAT2B 27430 broad.mit.edu 36 5 162863005 162863005 + 5'Flank SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182796 exon1 c.G27A p.E9E . . . MYO10 4651 broad.mit.edu 36 5 16733191 16733191 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012334 exon33 c.C4407T p.Y1469Y . . . ODZ2 57451 broad.mit.edu 36 5 167477934 167477934 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122679 exon10 c.T1873G p.Y625D . . . ODZ2 57451 broad.mit.edu 36 5 167559464 167559464 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122679 exon17 c.C3153T p.I1051I . . . MYO10 4651 broad.mit.edu 36 5 16757716 16757716 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012334 exon22 c.C2248T p.R750W . . . PANK3 79646 broad.mit.edu 36 5 167923505 167923505 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024594 exon4 c.G779T p.R260I . . . DOCK2 1794 broad.mit.edu 36 5 169014048 169014048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004946 exon2 c.G107A p.R36Q . . . DOCK2 1794 broad.mit.edu 36 5 169041429 169041429 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004946 exon7 c.G574A p.D192N . . . DOCK2 1794 broad.mit.edu 36 5 169071571 169071571 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004946 exon16 c.C1537A p.H513N . . . DOCK2 1794 broad.mit.edu 36 5 169073665 169073665 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004946 exon18 c.G1715A p.R572Q . . . DOCK2 1794 broad.mit.edu 36 5 169119346 169119346 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004946 exon24 c.G2436A p.A812A . . . FOXI1 2299 broad.mit.edu 36 5 169465638 169465638 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144769 exon1 c.G99T p.E33D . . . LCP2 3937 broad.mit.edu 36 5 169610322 169610322 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005565 exon20 c.G1469A p.R490Q . . . GABRP 2568 broad.mit.edu 36 5 170154878 170154878 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014211 exon5 c.G329A p.R110H . . . FBXW11 23291 broad.mit.edu 36 5 171237672 171237672 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033645 exon6 c.C754A p.L252M . . . UBTD2 92181 broad.mit.edu 36 5 171571523 171571523 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152277 exon3 c.C621T p.F207F . . . UBTD2 92181 broad.mit.edu 36 5 171571605 171571605 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152277 exon3 c.G539A p.R180Q . . . SH3PXD2B 285590 broad.mit.edu 36 5 171698754 171698754 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017995 exon13 c.C1960T p.P654S . . . SH3PXD2B 285590 broad.mit.edu 36 5 171698933 171698933 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017995 exon13 c.T1781G p.M594R . . . C5orf41 153222 broad.mit.edu 36 5 172482726 172482726 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153607 exon8 c.G1719T p.E573D . . . BNIP1 662 broad.mit.edu 36 5 172513954 172513954 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013980 exon4 c.G330A p.E110E . . . CPEB4 80315 broad.mit.edu 36 5 173250391 173250391 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030627 exon1 c.G1049A p.R350H . . . CPEB4 80315 broad.mit.edu 36 5 173311542 173311542 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030627 exon8 c.G1775A p.R592Q . . . MSX2 4488 broad.mit.edu 36 5 174088979 174088979 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002449 exon2 c.G591A p.A197A . . . DRD1 1812 broad.mit.edu 36 5 174802577 174802577 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000794 exon2 c.C132T p.V44V . . . HRH2 3274 broad.mit.edu 36 5 175043185 175043185 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022304 exon1 c.G343A p.D115N . . . HRH2 3274 broad.mit.edu 36 5 175043711 175043711 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022304 exon1 c.C869T p.A290V . . . CDHR2 54825 broad.mit.edu 36 5 175944195 175944195 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171976 exon19 c.G2307A p.E769E . . . GPRIN1 114787 broad.mit.edu 36 5 175957671 175957671 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052899 exon2 c.G1771T p.D591Y . . . GPRIN1 114787 broad.mit.edu 36 5 175958354 175958354 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052899 exon2 c.C1088A p.T363N . . . ZNF346 23567 broad.mit.edu 36 5 176410398 176410398 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012279 exon5 c.C558A p.F186L . . . NSD1 64324 broad.mit.edu 36 5 176494739 176494739 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon2 c.G29T p.R10I . . . NSD1 64324 broad.mit.edu 36 5 176551582 176551582 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon3 c.G1019T p.R340M . . . NSD1 64324 broad.mit.edu 36 5 176571645 176571645 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon5 c.A3639G p.I1213M . . . NSD1 64324 broad.mit.edu 36 5 176595441 176595441 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon6 c.G3810T p.E1270D . . . NSD1 64324 broad.mit.edu 36 5 176598085 176598085 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022455 exon7 c.A4163C p.E1388A . . . SLC34A1 6569 broad.mit.edu 36 5 176747884 176747884 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167579 exon8 c.C841A p.L281M . . . PROP1 5626 broad.mit.edu 36 5 177353857 177353857 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006261 exon2 c.G198A p.P66P . . . HNRNPAB 3182 broad.mit.edu 36 5 177566407 177566407 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031266 exon4 c.G447T p.K149N . . . HNRNPAB 3182 broad.mit.edu 36 5 177568964 177568964 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031266 exon6 c.G697T p.E233X . . . ZNF354A 6940 broad.mit.edu 36 5 178071864 178071864 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005649 exon5 c.C1621T p.R541X . . . ZNF354A 6940 broad.mit.edu 36 5 178071944 178071944 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005649 exon5 c.G1541T p.R514I . . . ZNF354B 117608 broad.mit.edu 36 5 178243278 178243278 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058230 exon5 c.G1219T p.E407X . . . ZFP2 80108 broad.mit.edu 36 5 178291775 178291775 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030613 exon5 c.T855C p.L285L . . . ZNF454 285676 broad.mit.edu 36 5 178324295 178324295 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182594 exon5 c.C284A p.T95N . . . ZNF454 285676 broad.mit.edu 36 5 178324654 178324654 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182594 exon5 c.A643C p.R215R . . . ZNF454 285676 broad.mit.edu 36 5 178325017 178325017 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182594 exon5 c.G1006A p.A336T . . . HNRNPH1 3187 broad.mit.edu 36 5 178977232 178977232 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005520 exon9 c.A946C p.R316R . . . RNF130 55819 broad.mit.edu 36 5 179372678 179372678 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018434 exon3 c.G682A p.D228N . . . GFPT2 9945 broad.mit.edu 36 5 179672130 179672130 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005110 exon15 c.C1452A p.I484I . . . CNOT6 57472 broad.mit.edu 36 5 179925550 179925550 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015455 exon7 c.C684A p.I228I . . . OR2Y1 134083 broad.mit.edu 36 5 180099284 180099284 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001657 exon1 c.T381C p.C127C . . . TRIM7 81786 broad.mit.edu 36 5 180558723 180558723 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203293 exon4 c.G850A p.E284K . . . TRIM41 90933 broad.mit.edu 36 5 180594547 180594547 + 3'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201627 exon7 c.G1477T p.E493X . . . CDH18 1016 broad.mit.edu 36 5 19607519 19607519 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004934 exon8 c.C1179T p.Y393Y . . . CDH18 1016 broad.mit.edu 36 5 19607650 19607650 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004934 exon8 c.G1048A p.A350T . . . PLEKHG4B 153478 broad.mit.edu 36 5 209195 209195 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052909 exon8 c.G1150A p.E384K . . . CDH12 1010 broad.mit.edu 36 5 21852906 21852906 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004061 exon9 c.G907T p.E303X . . . PRDM9 56979 broad.mit.edu 36 5 23556931 23556931 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020227 exon6 c.G394T p.E132X . . . PRDM9 56979 broad.mit.edu 36 5 23558198 23558198 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020227 exon7 c.G537T p.K179N . . . PRDM9 56979 broad.mit.edu 36 5 23562598 23562598 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020227 exon11 c.G1644T p.G548G . . . PRDM9 56979 broad.mit.edu 36 5 23563292 23563292 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020227 exon11 c.G2338T p.E780X . . . CDH10 1008 broad.mit.edu 36 5 24541052 24541052 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon8 c.C1319A p.S440Y . . . CDH10 1008 broad.mit.edu 36 5 24545643 24545643 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon7 c.G1045A p.E349K . . . CDH10 1008 broad.mit.edu 36 5 24571672 24571672 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006727 exon4 c.A543C p.Q181H . . . CDH10 1008 broad.mit.edu 36 5 24629339 24629339 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006727 exon2 c.T18A p.F6L . . . CCDC127 133957 broad.mit.edu 36 5 258710 258710 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145265 exon3 c.T485C p.F162S . . . CDH9 1007 broad.mit.edu 36 5 26921509 26921509 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016279 exon11 c.C1853T p.A618V . . . CDH9 1007 broad.mit.edu 36 5 26925814 26925814 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016279 exon9 c.A1400C p.K467T . . . CDH9 1007 broad.mit.edu 36 5 26938558 26938558 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016279 exon7 c.G1037A p.R346K . . . CDH9 1007 broad.mit.edu 36 5 26941907 26941907 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016279 exon5 c.C729A p.G243G . . . SDHA 6389 broad.mit.edu 36 5 286687 286687 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004168 exon8 c.G991A p.A331T . . . DROSHA 29102 broad.mit.edu 36 5 31437397 31437397 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon35 c.C4024T p.R1342W . . . DROSHA 29102 broad.mit.edu 36 5 31473157 31473157 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon23 c.A2888G p.N963S . . . DROSHA 29102 broad.mit.edu 36 5 31546919 31546919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon8 c.C1412T p.T471M . . . DROSHA 29102 broad.mit.edu 36 5 31551040 31551040 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013235 exon7 c.G1102T p.E368X . . . PDZD2 23037 broad.mit.edu 36 5 32125738 32125738 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178140 exon19 c.C6427A p.H2143N . . . PDZD2 23037 broad.mit.edu 36 5 32128871 32128871 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178140 exon20 c.C7829T p.A2610V . . . MTMR12 54545 broad.mit.edu 36 5 32304608 32304608 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040446 exon6 c.G539A p.R180Q . . . NPR3 4883 broad.mit.edu 36 5 32760574 32760574 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000908 exon2 c.T783A p.C261X . . . NPR3 4883 broad.mit.edu 36 5 32822123 32822123 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000908 exon8 c.G1538T p.R513M . . . C5orf23 79614 broad.mit.edu 36 5 32825630 32825630 + Nonstop_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024563 exon1 c.G366T p.X122Y . . . ADAMTS12 81792 broad.mit.edu 36 5 33563073 33563073 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon24 c.C4762T p.L1588F . . . ADAMTS12 81792 broad.mit.edu 36 5 33570786 33570786 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon23 c.A4515C p.K1505N . . . ADAMTS12 81792 broad.mit.edu 36 5 33585212 33585212 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030955 exon21 c.C4159T p.R1387C . . . C1QTNF3 114899 broad.mit.edu 36 5 34056525 34056525 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181435 exon6 c.C880T p.R294X . . . RAI14 26064 broad.mit.edu 36 5 34847718 34847718 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145521 exon10 c.C647T p.S216F . . . RAI14 26064 broad.mit.edu 36 5 34847794 34847794 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145521 exon10 c.C723A p.I241I . . . TTC23L 153657 broad.mit.edu 36 5 34886074 34886074 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144725 exon4 c.C283T p.R95X . . . BRIX1 55299 broad.mit.edu 36 5 34960762 34960762 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018321 exon9 c.T717C p.N239N . . . AGXT2 64902 broad.mit.edu 36 5 35039713 35039713 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031900 exon13 c.G1349A p.R450Q . . . AGXT2 64902 broad.mit.edu 36 5 35069392 35069392 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031900 exon6 c.C605A p.P202H . . . SPEF2 79925 broad.mit.edu 36 5 35703103 35703103 + Missense_Mutation SNP G A A rs34852821 byCluster;byFrequency;by1000genomes TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024867 exon9 c.G1340A p.R447Q . . . SPEF2 79925 broad.mit.edu 36 5 35727104 35727104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024867 exon11 c.C1733T p.S578F . . . UGT3A1 133688 broad.mit.edu 36 5 36027036 36027036 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152404 exon1 c.G64A p.A22T . . . UGT3A2 167127 broad.mit.edu 36 5 36073697 36073697 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168316 exon5 c.G1152T p.E384D . . . LMBRD2 92255 broad.mit.edu 36 5 36150940 36150940 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007527 exon12 c.C1476A p.F492L . . . NIPBL 25836 broad.mit.edu 36 5 37021539 37021539 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015384 exon10 c.C2500T p.R834X . . . NIPBL 25836 broad.mit.edu 36 5 37093096 37093096 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015384 exon43 c.C7315T p.P2439S . . . C5orf42 65250 broad.mit.edu 36 5 37143523 37143523 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023073 exon52 c.G9532A p.E3178K . . . C5orf42 65250 broad.mit.edu 36 5 37194166 37194166 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023073 exon39 c.G7729T p.D2577Y . . . EGFLAM 133584 broad.mit.edu 36 5 38442079 38442079 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152403 exon7 c.T807A p.D269E . . . LIFR 3977 broad.mit.edu 36 5 38517674 38517674 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon20 c.C3074A p.T1025N . . . LIFR 3977 broad.mit.edu 36 5 38546359 38546359 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon7 c.G955A p.E319K . . . LIFR 3977 broad.mit.edu 36 5 38563111 38563111 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127671 exon4 c.T300C p.I100I . . . OSMR 9180 broad.mit.edu 36 5 38919771 38919771 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003999 exon5 c.C504T p.Y168Y . . . RICTOR 253260 broad.mit.edu 36 5 38986446 38986446 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152756 exon31 c.C3261A p.F1087L . . . RICTOR 253260 broad.mit.edu 36 5 39003061 39003061 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152756 exon14 c.G1177A p.A393T . . . FYB 2533 broad.mit.edu 36 5 39174520 39174520 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199335 exon6 c.G1390T p.D464Y . . . DAB2 1601 broad.mit.edu 36 5 39430170 39430170 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001343 exon2 c.G10A p.E4K . . . CARD6 84674 broad.mit.edu 36 5 40888567 40888567 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032587 exon3 c.G1376A p.R459H . . . CARD6 84674 broad.mit.edu 36 5 40889966 40889966 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032587 exon3 c.A2775G p.S925S . . . C7 730 broad.mit.edu 36 5 40997995 40997995 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000587 exon13 c.T1713C p.C571C . . . HEATR7B2 133558 broad.mit.edu 36 5 41036203 41036203 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon39 c.G4358A p.R1453H . . . HEATR7B2 133558 broad.mit.edu 36 5 41043288 41043288 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon34 c.T3634G p.L1212V . . . HEATR7B2 133558 broad.mit.edu 36 5 41054225 41054225 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon27 c.C2738T p.A913V . . . HEATR7B2 133558 broad.mit.edu 36 5 41068963 41068963 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon23 c.C2298T p.V766V . . . HEATR7B2 133558 broad.mit.edu 36 5 41085181 41085181 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173489 exon14 c.A1459G p.S487G . . . C6 729 broad.mit.edu 36 5 41195046 41195046 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000065 exon12 c.C1751T p.S584L . . . C6 729 broad.mit.edu 36 5 41231742 41231742 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000065 exon5 c.G496T p.D166Y . . . PLCXD3 345557 broad.mit.edu 36 5 41417918 41417918 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005473 exon2 c.C579A p.V193V . . . PLCXD3 345557 broad.mit.edu 36 5 41418390 41418390 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005473 exon2 c.C107A p.S36Y . . . C5orf51 285636 broad.mit.edu 36 5 41953113 41953113 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175921 exon6 c.G840A p.T280T . . . GHR 2690 broad.mit.edu 36 5 42735788 42735788 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000163 exon6 c.A545C p.D182A . . . GHR 2690 broad.mit.edu 36 5 42753975 42753975 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000163 exon9 c.C940A p.L314I . . . GHR 2690 broad.mit.edu 36 5 42754633 42754633 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000163 exon10 c.C1267A p.L423I . . . HCN1 348980 broad.mit.edu 36 5 45297897 45297897 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021072 exon8 c.G2556A p.P852P . . . PARP8 79668 broad.mit.edu 36 5 50091900 50091900 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178055 exon6 c.G292T p.D98Y . . . PARP8 79668 broad.mit.edu 36 5 50126886 50126886 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178055 exon13 c.G1306A p.A436T . . . PARP8 79668 broad.mit.edu 36 5 50152811 50152811 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178055 exon17 c.A1676G p.D559G . . . ISL1 3670 broad.mit.edu 36 5 50716300 50716300 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002202 exon2 c.A197G p.Y66C . . . ITGA1 3672 broad.mit.edu 36 5 52271473 52271473 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181501 exon26 c.C3227A p.S1076Y . . . ITGA2 3673 broad.mit.edu 36 5 52413278 52413278 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002203 exon26 c.G3139T p.E1047X . . . ADAMTS16 170690 broad.mit.edu 36 5 5292964 5292964 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139056 exon16 c.G2449A p.D817N . . . HSPB3 8988 broad.mit.edu 36 5 53787570 53787570 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006308 exon1 c.G194A p.R65Q . . . GZMK 3003 broad.mit.edu 36 5 54356281 54356281 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002104 exon2 c.C101T p.S34L . . . GZMK 3003 broad.mit.edu 36 5 54356391 54356391 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002104 exon2 c.C211T p.R71W . . . GZMK 3003 broad.mit.edu 36 5 54363117 54363117 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002104 exon4 c.C532T p.R178X . . . DHX29 54505 broad.mit.edu 36 5 54606214 54606214 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019030 exon16 c.G2675A p.R892K . . . KIAA0947 23379 broad.mit.edu 36 5 5500605 5500605 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015325 exon8 c.G490A p.E164K . . . DDX4 54514 broad.mit.edu 36 5 55112671 55112671 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024415 exon9 c.G517A p.E173K . . . IL31RA 133396 broad.mit.edu 36 5 55203907 55203907 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139017 exon4 c.A325C p.N109H . . . ANKRD55 79722 broad.mit.edu 36 5 55443083 55443083 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024669 exon10 c.C1249A p.L417I . . . MAP3K1 4214 broad.mit.edu 36 5 56197528 56197528 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005921 exon6 c.C1268A p.S423X . . . MAP3K1 4214 broad.mit.edu 36 5 56225184 56225184 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005921 exon20 c.C4459T p.R1487C . . . MIER3 166968 broad.mit.edu 36 5 56278595 56278595 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152622 exon3 c.A95C p.D32A . . . KIF2A 3796 broad.mit.edu 36 5 61717080 61717080 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004520 exon20 c.C2048A p.S683Y . . . HTR1A 3350 broad.mit.edu 36 5 63292424 63292424 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000524 exon1 c.C879T p.I293I . . . HTR1A 3350 broad.mit.edu 36 5 63292919 63292919 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000524 exon1 c.C384T p.C128C . . . CWC27 10283 broad.mit.edu 36 5 64115513 64115513 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005869 exon4 c.C347G p.T116R . . . ADAMTS6 11174 broad.mit.edu 36 5 64557757 64557757 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_197941 exon16 c.A1979C p.N660T . . . CENPK 64105 broad.mit.edu 36 5 64853099 64853099 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022145 exon10 c.G610T p.E204X . . . PPWD1 23398 broad.mit.edu 36 5 64901303 64901303 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015342 exon3 c.C388T p.R130C . . . ERBB2IP 55914 broad.mit.edu 36 5 65385006 65385006 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018695 exon21 c.T2104G p.F702V . . . ERBB2IP 55914 broad.mit.edu 36 5 65386276 65386276 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018695 exon21 c.G3374T p.R1125I . . . CD180 4064 broad.mit.edu 36 5 66515876 66515876 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005582 exon3 c.C551A p.A184D . . . CD180 4064 broad.mit.edu 36 5 66517502 66517502 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005582 exon2 c.T190A p.F64I . . . PIK3R1 5295 broad.mit.edu 36 5 67624707 67624707 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181523 exon8 c.C1042T p.R348X . . . CCDC125 202243 broad.mit.edu 36 5 68614371 68614371 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176816 exon11 c.G1477T p.D493Y . . . CCDC125 202243 broad.mit.edu 36 5 68652049 68652049 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176816 exon1 c.A75C p.E25D . . . RAD17 5884 broad.mit.edu 36 5 68717782 68717782 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133344 exon8 c.C718T p.R240X . . . BDP1 55814 broad.mit.edu 36 5 70834341 70834341 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018429 exon15 c.G2208A p.E736E . . . BDP1 55814 broad.mit.edu 36 5 70841616 70841616 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018429 exon17 c.G2941T p.D981Y . . . BDP1 55814 broad.mit.edu 36 5 70842270 70842270 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018429 exon17 c.G3595T p.D1199Y . . . BDP1 55814 broad.mit.edu 36 5 70854423 70854423 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018429 exon24 c.G5278T p.D1760Y . . . MAP1B 4131 broad.mit.edu 36 5 71518272 71518272 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon4 c.G445T p.E149X . . . MAP1B 4131 broad.mit.edu 36 5 71526484 71526484 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G1546A p.A516T . . . MAP1B 4131 broad.mit.edu 36 5 71527477 71527477 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G2539T p.E847X . . . MAP1B 4131 broad.mit.edu 36 5 71529643 71529643 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G4705A p.D1569N . . . MAP1B 4131 broad.mit.edu 36 5 71531036 71531036 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005909 exon5 c.G6098A p.R2033Q . . . MRPS27 23107 broad.mit.edu 36 5 71645735 71645735 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015084 exon2 c.G80T p.R27I . . . PTCD2 79810 broad.mit.edu 36 5 71652014 71652014 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024754 exon1 c.C49A p.L17I . . . TNPO1 3842 broad.mit.edu 36 5 72221484 72221484 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153188 exon14 c.C1621A p.L541I . . . FCHO2 115548 broad.mit.edu 36 5 72322179 72322179 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138782 exon4 c.G319T p.E107X . . . FCHO2 115548 broad.mit.edu 36 5 72348804 72348804 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138782 exon8 c.G709T p.E237X . . . FCHO2 115548 broad.mit.edu 36 5 72413370 72413370 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138782 exon23 c.C1985A p.S662X . . . ANKRA2 57763 broad.mit.edu 36 5 72892736 72892736 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023039 exon3 c.C423A p.V141V . . . UTP15 84135 broad.mit.edu 36 5 72898955 72898955 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032175 exon2 c.G30T p.Q10H . . . RGNEF 64283 broad.mit.edu 36 5 73189785 73189785 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177693 exon16 c.T2032C p.S678P . . . RGNEF 64283 broad.mit.edu 36 5 73217481 73217481 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177693 exon25 c.G3106T p.D1036Y . . . RGNEF 64283 broad.mit.edu 36 5 73235818 73235818 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177693 exon32 c.T4090G p.F1364V . . . ENC1 8507 broad.mit.edu 36 5 73966392 73966392 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003633 exon2 c.G1675A p.D559N . . . HMGCR 3156 broad.mit.edu 36 5 74675887 74675887 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000859 exon4 c.C339A p.F113L . . . POLK 51426 broad.mit.edu 36 5 74929332 74929332 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016218 exon14 c.C2490A p.S830R . . . POC5 134359 broad.mit.edu 36 5 75026372 75026372 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099271 exon6 c.T554G p.F185C . . . F2RL2 2151 broad.mit.edu 36 5 75949411 75949411 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004101 exon2 c.G877A p.D293N . . . PDE8B 8622 broad.mit.edu 36 5 76657310 76657310 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029853 exon2 c.G530T p.R177M . . . PDE8B 8622 broad.mit.edu 36 5 76744792 76744792 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029853 exon16 c.G1753A p.E585K . . . PDE8B 8622 broad.mit.edu 36 5 76757412 76757412 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029853 exon20 c.G2423A p.S808N . . . OTP 23440 broad.mit.edu 36 5 76968579 76968579 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032109 exon2 c.G270A p.P90P . . . ADCY2 108 broad.mit.edu 36 5 7748883 7748883 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020546 exon6 c.C888T p.I296I . . . ARSB 411 broad.mit.edu 36 5 78112143 78112143 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000046 exon8 c.C1435T p.R479W . . . ADCY2 108 broad.mit.edu 36 5 7826058 7826058 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020546 exon18 c.G2228A p.S743N . . . ARSB 411 broad.mit.edu 36 5 78296167 78296167 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198709 exon4 c.A518G p.E173G . . . ADCY2 108 broad.mit.edu 36 5 7842868 7842868 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020546 exon20 c.C2583T p.P861P . . . BHMT 635 broad.mit.edu 36 5 78450947 78450947 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001713 exon3 c.G276A p.E92E . . . HOMER1 9456 broad.mit.edu 36 5 78782692 78782692 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004272 exon3 c.A171T p.I57I . . . PAPD4 167153 broad.mit.edu 36 5 78972506 78972506 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114394 exon5 c.G542A p.R181Q . . . CMYA5 202333 broad.mit.edu 36 5 79067780 79067780 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon2 c.C7436A p.S2479Y . . . CMYA5 202333 broad.mit.edu 36 5 79070849 79070849 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon2 c.A10505C p.K3502T . . . CMYA5 202333 broad.mit.edu 36 5 79084306 79084306 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153610 exon6 c.G11043A p.A3681A . . . FASTKD3 79072 broad.mit.edu 36 5 7920578 7920578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024091 exon2 c.C619T p.R207C . . . MTX3 345778 broad.mit.edu 36 5 79318529 79318529 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010891 exon7 c.G739T p.D247Y . . . THBS4 7060 broad.mit.edu 36 5 79371699 79371699 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003248 exon2 c.C132T p.G44G . . . THBS4 7060 broad.mit.edu 36 5 79410723 79410723 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003248 exon19 c.C2397A p.I799I . . . ZFYVE16 9765 broad.mit.edu 36 5 79788119 79788119 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014733 exon12 c.A3774G p.I1258M . . . MSH3 4437 broad.mit.edu 36 5 80003832 80003832 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002439 exon5 c.A806G p.E269G . . . MSH3 4437 broad.mit.edu 36 5 80107286 80107286 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002439 exon16 c.G2271T p.K757N . . . RASGRF2 5924 broad.mit.edu 36 5 80532965 80532965 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006909 exon19 c.C2854T p.R952X . . . CKMT2 1160 broad.mit.edu 36 5 80589323 80589323 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001825 exon8 c.G771A p.K257K . . . ZCCHC9 84240 broad.mit.edu 36 5 80636528 80636528 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001131036 exon2 c.G196T p.E66X . . . ATG10 83734 broad.mit.edu 36 5 81510106 81510106 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031482 exon5 c.C397A p.H133N . . . ATP6AP1L 92270 broad.mit.edu 36 5 81649623 81649623 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017971 exon4 c.C423T p.C141C . . . VCAN 1462 broad.mit.edu 36 5 82851295 82851295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164098 exon7 c.G1414A p.D472N . . . VCAN 1462 broad.mit.edu 36 5 82852128 82852128 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164098 exon7 c.C2247T p.F749F . . . VCAN 1462 broad.mit.edu 36 5 82852460 82852460 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164098 exon7 c.G2579T p.S860I . . . VCAN 1462 broad.mit.edu 36 5 82869865 82869865 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004385 exon8 c.A5287G p.T1763A . . . VCAN 1462 broad.mit.edu 36 5 82871433 82871433 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004385 exon8 c.C6855A p.P2285P . . . VCAN 1462 broad.mit.edu 36 5 82871530 82871530 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004385 exon8 c.A6952G p.T2318A . . . VCAN 1462 broad.mit.edu 36 5 82872106 82872106 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004385 exon8 c.G7528T p.V2510L . . . VCAN 1462 broad.mit.edu 36 5 82872273 82872273 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004385 exon8 c.A7695C p.E2565D . . . VCAN 1462 broad.mit.edu 36 5 82885005 82885005 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001126336 exon9 c.G1337A p.R446Q . . . EDIL3 10085 broad.mit.edu 36 5 83275096 83275096 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005711 exon11 c.C1341T p.I447I . . . RASA1 5921 broad.mit.edu 36 5 86600435 86600435 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002890 exon1 c.G411A p.L137L . . . RASA1 5921 broad.mit.edu 36 5 86600461 86600461 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002890 exon1 c.T437C p.L146S . . . RASA1 5921 broad.mit.edu 36 5 86695019 86695019 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002890 exon11 c.G1552T p.G518X . . . MEF2C 4208 broad.mit.edu 36 5 88054401 88054401 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193350 exon11 c.G1198T p.D400Y . . . MEF2C 4208 broad.mit.edu 36 5 88083453 88083453 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193350 exon5 c.G566A p.R189Q . . . GPR98 84059 broad.mit.edu 36 5 90051779 90051779 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon44 c.C9606A p.I3202I . . . GPR98 84059 broad.mit.edu 36 5 90108046 90108046 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon61 c.C12424T p.R4142W . . . GPR98 84059 broad.mit.edu 36 5 90180273 90180273 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032119 exon79 c.C17083A p.L5695I . . . SEMA5A 9037 broad.mit.edu 36 5 9390844 9390844 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003966 exon4 c.G205T p.E69X . . . MCTP1 79772 broad.mit.edu 36 5 94314694 94314694 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024717 exon3 c.G966T p.E322D . . . MCTP1 79772 broad.mit.edu 36 5 94314790 94314790 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024717 exon3 c.C870T p.I290I . . . FAM81B 153643 broad.mit.edu 36 5 94790150 94790150 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152548 exon6 c.C744T p.F248F . . . TTC37 9652 broad.mit.edu 36 5 94846297 94846297 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014639 exon38 c.G3940A p.E1314K . . . SPATA9 83890 broad.mit.edu 36 5 95025421 95025421 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031952 exon4 c.A466C p.I156L . . . ELL2 22936 broad.mit.edu 36 5 95280889 95280889 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012081 exon3 c.C312T p.F104F . . . PCSK1 5122 broad.mit.edu 36 5 95784823 95784823 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177875 exon4 c.G352A p.V118I . . . ERAP1 51752 broad.mit.edu 36 5 96164869 96164869 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040458 exon2 c.G517A p.E173K . . . LNPEP 4012 broad.mit.edu 36 5 96383766 96383766 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005575 exon14 c.G2383A p.V795I . . . LIX1 167410 broad.mit.edu 36 5 96486000 96486000 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153234 exon2 c.T172C p.S58P . . . FAM174A 345757 broad.mit.edu 36 5 99925686 99925686 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198507 exon2 c.G464T p.R155I . . . SLCO6A1 133482 broad.mit.edu 36 5 101802371 101802371 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PJA2 9867 broad.mit.edu 36 5 108742855 108742855 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CTNND2 1501 broad.mit.edu 36 5 11041364 11041364 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CAMK4 814 broad.mit.edu 36 5 110740447 110740447 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DTWD2 285605 broad.mit.edu 36 5 118338183 118338183 + RNA SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DMXL1 1657 broad.mit.edu 36 5 118507424 118507424 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . P4HA2 8974 broad.mit.edu 36 5 131567440 131567440 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HSPA4 3308 broad.mit.edu 36 5 132467627 132467627 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FSTL4 23105 broad.mit.edu 36 5 132930821 132930821 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SMAD5 4090 broad.mit.edu 36 5 135526986 135526986 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDC23 8697 broad.mit.edu 36 5 137556090 137556090 + Splice_Site SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CDC23 8697 broad.mit.edu 36 5 137565696 137565696 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HSPA9 3313 broad.mit.edu 36 5 137920188 137920188 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DNAH5 1767 broad.mit.edu 36 5 13929927 13929927 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HARS 3035 broad.mit.edu 36 5 140050616 140050616 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PCDHGB7 56099 broad.mit.edu 36 5 140780046 140780046 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ARAP3 64411 broad.mit.edu 36 5 141025135 141025135 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LARS 51520 broad.mit.edu 36 5 145499952 145499952 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ABLIM3 22885 broad.mit.edu 36 5 148558164 148558164 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TCOF1 6949 broad.mit.edu 36 5 149756026 149756026 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EBF1 1879 broad.mit.edu 36 5 158058694 158058694 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTC1 7265 broad.mit.edu 36 5 159402710 159402710 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PTTG1 9232 broad.mit.edu 36 5 159782000 159782000 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 5 161111092 161111092 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GABRA1 2554 broad.mit.edu 36 5 161210394 161210394 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GABRG2 2566 broad.mit.edu 36 5 161511994 161511994 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PANK3 79646 broad.mit.edu 36 5 167918752 167918752 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYO10 4651 broad.mit.edu 36 5 16816666 16816666 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DOCK2 1794 broad.mit.edu 36 5 169428713 169428713 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C5orf25 375484 broad.mit.edu 36 5 175649308 175649308 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C5orf25 375484 broad.mit.edu 36 5 175650364 175650364 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C5orf45 51149 broad.mit.edu 36 5 179201502 179201502 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RASGEF1C 255426 broad.mit.edu 36 5 179461757 179461757 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MAPK9 5601 broad.mit.edu 36 5 179624446 179624446 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BTNL8 79908 broad.mit.edu 36 5 180342043 180342043 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CDH18 1016 broad.mit.edu 36 5 19509591 19509591 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRDM9 56979 broad.mit.edu 36 5 23544973 23544973 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CDH9 1007 broad.mit.edu 36 5 26941824 26941824 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TARS 6897 broad.mit.edu 36 5 33490798 33490798 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADAMTS12 81792 broad.mit.edu 36 5 33563240 33563240 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAI14 26064 broad.mit.edu 36 5 34846867 34846867 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CAPSL 133690 broad.mit.edu 36 5 35946224 35946224 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 5 37851506 37851506 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EGFLAM 133584 broad.mit.edu 36 5 38498881 38498881 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OXCT1 5019 broad.mit.edu 36 5 41830615 41830615 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PAIP1 10605 broad.mit.edu 36 5 43591867 43591867 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ITGA1 3672 broad.mit.edu 36 5 52241738 52241738 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HSPB3 8988 broad.mit.edu 36 5 53787833 53787833 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GZMK 3003 broad.mit.edu 36 5 54362009 54362009 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IL31RA 133396 broad.mit.edu 36 5 55231728 55231728 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C5orf35 133383 broad.mit.edu 36 5 56243131 56243131 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PDE4D 5144 broad.mit.edu 36 5 59035284 59035284 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 5 62108566 62108566 + IGR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RGS7BP 401190 broad.mit.edu 36 5 63930026 63930026 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ERBB2IP 55914 broad.mit.edu 36 5 65354960 65354960 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAD17 5884 broad.mit.edu 36 5 68723606 68723606 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OCLN 4950 broad.mit.edu 36 5 70405841 70405841 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MCCC2 64087 broad.mit.edu 36 5 70935928 70935928 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TNPO1 3842 broad.mit.edu 36 5 72231578 72231578 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RGNEF 64283 broad.mit.edu 36 5 73163911 73163911 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RGNEF 64283 broad.mit.edu 36 5 73204832 73204832 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RGNEF 64283 broad.mit.edu 36 5 73243168 73243168 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TBCA 6902 broad.mit.edu 36 5 77039821 77039821 + Splice_Site SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AP3B1 8546 broad.mit.edu 36 5 77513086 77513086 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AP3B1 8546 broad.mit.edu 36 5 77626024 77626024 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . THBS4 7060 broad.mit.edu 36 5 79391494 79391494 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZFYVE16 9765 broad.mit.edu 36 5 79776834 79776834 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . XRCC4 7518 broad.mit.edu 36 5 82535126 82535126 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPR98 84059 broad.mit.edu 36 5 90172566 90172566 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TTC37 9652 broad.mit.edu 36 5 94831233 94831233 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MUT 4594 broad.mit.edu 36 6 49533571 49533572 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000255 exon3 c.545_546insA p.M182fs . . . C6orf48 50854 broad.mit.edu 36 6 31915401 31915401 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040438 exon4 c.210delA p.G70fs . . . MCHR2 84539 broad.mit.edu 36 6 100475766 100475766 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040179 exon6 c.C794T p.A265V . . . SIM1 6492 broad.mit.edu 36 6 100945299 100945299 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005068 exon11 c.G1960A p.A654T . . . SIM1 6492 broad.mit.edu 36 6 101003216 101003216 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005068 exon6 c.C603T p.F201F . . . SIM1 6492 broad.mit.edu 36 6 101003992 101003992 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005068 exon5 c.C511T p.R171C . . . GRIK2 2898 broad.mit.edu 36 6 102231298 102231298 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175768 exon4 c.G649T p.E217X . . . GRIK2 2898 broad.mit.edu 36 6 102444280 102444280 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175768 exon11 c.T1597G p.F533V . . . GRIK2 2898 broad.mit.edu 36 6 102444415 102444415 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175768 exon11 c.C1732A p.L578I . . . TFAP2A 7020 broad.mit.edu 36 6 10512861 10512861 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003220 exon4 c.C630A p.V210V . . . HACE1 57531 broad.mit.edu 36 6 105326583 105326583 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020771 exon18 c.C1924T p.R642W . . . HACE1 57531 broad.mit.edu 36 6 105351280 105351280 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020771 exon9 c.G759A p.P253P . . . POPDC3 64208 broad.mit.edu 36 6 105716470 105716470 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022361 exon2 c.G8T p.R3I . . . GCNT2 2651 broad.mit.edu 36 6 10665073 10665073 + Missense_Mutation SNP G A A rs56343921 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001491 exon1 c.G431A p.C144Y . . . QRSL1 55278 broad.mit.edu 36 6 107206896 107206896 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018292 exon6 c.C677T p.S226L . . . C6orf203 51250 broad.mit.edu 36 6 107468079 107468079 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142470 exon3 c.C437A p.S146Y . . . SCML4 256380 broad.mit.edu 36 6 108177704 108177704 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198081 exon3 c.T163C p.S55P . . . SEC63 11231 broad.mit.edu 36 6 108299666 108299666 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007214 exon21 c.G2218T p.E740X . . . SEC63 11231 broad.mit.edu 36 6 108300716 108300716 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007214 exon20 c.A2128C p.K710Q . . . NR2E1 7101 broad.mit.edu 36 6 108615357 108615357 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003269 exon9 c.C1155A p.I385I . . . LACE1 246269 broad.mit.edu 36 6 108947596 108947596 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145315 exon12 c.C1207T p.R403C . . . SESN1 27244 broad.mit.edu 36 6 109430226 109430226 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014454 exon2 c.G293T p.R98I . . . GCM2 9247 broad.mit.edu 36 6 10982499 10982499 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004752 exon5 c.G1236A p.S412S . . . GCM2 9247 broad.mit.edu 36 6 10985502 10985502 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004752 exon2 c.G200A p.R67H . . . PPIL6 285755 broad.mit.edu 36 6 109864038 109864038 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001111298 exon2 c.G193T p.E65X . . . ZBTB24 9841 broad.mit.edu 36 6 109894022 109894022 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014797 exon7 c.C1819A p.L607I . . . ZBTB24 9841 broad.mit.edu 36 6 109909081 109909081 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164313 exon2 c.G842A p.R281K . . . AKD1 221264 broad.mit.edu 36 6 110099891 110099891 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145025 exon5 c.C255T p.S85S . . . SYCP2L 221711 broad.mit.edu 36 6 11011153 11011153 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040274 exon8 c.C612T p.F204F . . . GPR6 2830 broad.mit.edu 36 6 110408071 110408071 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005284 exon1 c.C1063T p.R355C . . . DDO 8528 broad.mit.edu 36 6 110820967 110820967 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004032 exon4 c.C637A p.L213M . . . GTF3C6 112495 broad.mit.edu 36 6 111390392 111390392 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138408 exon5 c.G352T p.E118X . . . KIAA1919 91749 broad.mit.edu 36 6 111694554 111694554 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153369 exon4 c.G1096T p.E366X . . . REV3L 5980 broad.mit.edu 36 6 111795856 111795856 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002912 exon14 c.A5828G p.D1943G . . . REV3L 5980 broad.mit.edu 36 6 111801312 111801312 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002912 exon13 c.T4939G p.F1647V . . . REV3L 5980 broad.mit.edu 36 6 111815919 111815919 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002912 exon8 c.C925A p.L309I . . . ERVFRDE1 405754 broad.mit.edu 36 6 11212922 11212922 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207582 exon2 c.G608A p.R203Q . . . FYN 2534 broad.mit.edu 36 6 112130862 112130862 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153048 exon6 c.C616T p.R206C . . . TUBE1 51175 broad.mit.edu 36 6 112512105 112512105 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016262 exon4 c.A190C p.I64L . . . LAMA4 3910 broad.mit.edu 36 6 112542079 112542079 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105206 exon38 c.C5219A p.S1740Y . . . NEDD9 4739 broad.mit.edu 36 6 11300659 11300659 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006403 exon4 c.G568A p.D190N . . . HDAC2 3066 broad.mit.edu 36 6 114371361 114371361 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001527 exon12 c.C1225T p.R409X HDAC2,skin,NS,Substitution - Nonsense,0 . . HS3ST5 222537 broad.mit.edu 36 6 114485247 114485247 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153612 exon2 c.A908C p.K303T . . . NT5DC1 221294 broad.mit.edu 36 6 116545789 116545789 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152729 exon6 c.T517C p.S173P . . . DSE 29940 broad.mit.edu 36 6 116854545 116854545 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013352 exon3 c.C532A p.L178I . . . FAM26E 254228 broad.mit.edu 36 6 116939948 116939948 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153711 exon1 c.G396A p.T132T . . . RSPH4A 345895 broad.mit.edu 36 6 117055940 117055940 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001161664 exon3 c.G1377T p.K459N . . . FAM162B 221303 broad.mit.edu 36 6 117189866 117189866 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001085480 exon3 c.C357T p.I119I . . . RFX6 222546 broad.mit.edu 36 6 117352543 117352543 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173560 exon15 c.G1574A p.R525Q . . . ROS1 6098 broad.mit.edu 36 6 117716541 117716541 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon43 c.G6851A p.G2284D . . . ROS1 6098 broad.mit.edu 36 6 117747774 117747774 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon36 c.G5890A p.A1964T . . . ROS1 6098 broad.mit.edu 36 6 117787681 117787681 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002944 exon23 c.A3632C p.N1211T . . . SLC35F1 222553 broad.mit.edu 36 6 118742036 118742036 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029858 exon8 c.G1155T p.Q385H . . . C6orf105 84830 broad.mit.edu 36 6 11886840 11886840 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143948 exon1 c.A139C p.T47P . . . C6orf204 387119 broad.mit.edu 36 6 119060462 119060462 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042475 exon2 c.G79T p.D27Y . . . MCM9 254394 broad.mit.edu 36 6 119274592 119274592 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153255 exon7 c.A1072G p.K358E . . . FAM184A 79632 broad.mit.edu 36 6 119343113 119343113 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024581 exon10 c.G2190A p.T730T . . . FAM184A 79632 broad.mit.edu 36 6 119387455 119387455 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024581 exon2 c.G382A p.E128K . . . HIVEP1 3096 broad.mit.edu 36 6 12123855 12123855 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002114 exon2 c.G8A p.R3Q . . . C6orf170 221322 broad.mit.edu 36 6 121646728 121646728 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152730 exon13 c.T1400C p.V467A . . . C6orf170 221322 broad.mit.edu 36 6 121697134 121697134 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152730 exon1 c.G142T p.E48X . . . RNF217 154214 broad.mit.edu 36 6 125445721 125445721 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152553 exon9 c.T807G p.I269M . . . TPD52L1 7164 broad.mit.edu 36 6 125620003 125620003 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003287 exon6 c.G486T p.K162N . . . HDDC2 51020 broad.mit.edu 36 6 125640019 125640019 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016063 exon5 c.C445A p.L149I . . . RNF146 81847 broad.mit.edu 36 6 127649953 127649953 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030963 exon5 c.C499T p.R167X . . . ECHDC1 55862 broad.mit.edu 36 6 127679294 127679294 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001002030 exon4 c.T410G p.F137C . . . KIAA0408 9729 broad.mit.edu 36 6 127810320 127810320 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014702 exon5 c.C837T p.S279S . . . C6orf174 387104 broad.mit.edu 36 6 127839245 127839245 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012279 exon6 c.G1619T p.R540I . . . THEMIS 387357 broad.mit.edu 36 6 128176751 128176751 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164685 exon4 c.G728A p.R243H . . . THEMIS 387357 broad.mit.edu 36 6 128192463 128192463 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164685 exon3 c.T560G p.I187S . . . LAMA2 3908 broad.mit.edu 36 6 129511918 129511918 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon7 c.T1011C p.T337T . . . LAMA2 3908 broad.mit.edu 36 6 129553070 129553070 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon11 c.C1495T p.R499C . . . LAMA2 3908 broad.mit.edu 36 6 129756052 129756052 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon37 c.C5404T p.R1802C . . . LAMA2 3908 broad.mit.edu 36 6 129764085 129764085 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon38 c.C5469T p.S1823S . . . LAMA2 3908 broad.mit.edu 36 6 129865512 129865512 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079823 exon58 c.G8248T p.E2750X . . . L3MBTL3 84456 broad.mit.edu 36 6 130405604 130405604 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032438 exon3 c.G67T p.D23Y . . . SAMD3 154075 broad.mit.edu 36 6 130517664 130517664 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017373 exon9 c.A1022G p.Q341R . . . AKAP7 9465 broad.mit.edu 36 6 131531986 131531986 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016377 exon4 c.G403T p.E135X . . . AKAP7 9465 broad.mit.edu 36 6 131582638 131582638 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016377 exon6 c.A781G p.I261V . . . MED23 9439 broad.mit.edu 36 6 131956941 131956941 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004830 exon23 c.C3223T p.L1075L . . . CTGF 1490 broad.mit.edu 36 6 132312226 132312226 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001901 exon5 c.C921T p.C307C . . . TAAR6 319100 broad.mit.edu 36 6 132933620 132933620 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175067 exon1 c.C467A p.S156Y . . . TAAR5 9038 broad.mit.edu 36 6 132951936 132951936 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003967 exon1 c.C583T p.L195L . . . TAAR1 134864 broad.mit.edu 36 6 133008477 133008477 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138327 exon1 c.A359C p.D120A . . . VNN1 8876 broad.mit.edu 36 6 133056113 133056113 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004666 exon4 c.T569C p.V190A . . . VNN1 8876 broad.mit.edu 36 6 133056962 133056962 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004666 exon3 c.T394C p.S132P . . . VNN2 8875 broad.mit.edu 36 6 133118753 133118753 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004665 exon3 c.T459C p.C153C . . . EYA4 2070 broad.mit.edu 36 6 133819437 133819437 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172103 exon5 c.G259T p.A87S . . . EYA4 2070 broad.mit.edu 36 6 133875761 133875761 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172103 exon15 c.C1324A p.L442I . . . SLC2A12 154091 broad.mit.edu 36 6 134353992 134353992 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145176 exon5 c.G1848A p.E616E . . . SGK1 6446 broad.mit.edu 36 6 134535593 134535593 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143678 exon7 c.C604A p.L202I . . . ALDH8A1 64577 broad.mit.edu 36 6 135312869 135312869 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170771 exon1 c.G16A p.A6T . . . PDE7B 27115 broad.mit.edu 36 6 136541861 136541861 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018945 exon10 c.C837A p.I279I . . . FAM54A 113115 broad.mit.edu 36 6 136596295 136596295 + Missense_Mutation SNP C A A rs2274139 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138419 exon7 c.G905T p.R302I . . . BCLAF1 9774 broad.mit.edu 36 6 136624193 136624193 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077440 exon11 c.G2507T p.W836L . . . BCLAF1 9774 broad.mit.edu 36 6 136631064 136631064 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077440 exon10 c.G2320T p.E774X . . . BCLAF1 9774 broad.mit.edu 36 6 136641132 136641132 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077440 exon4 c.G574T p.D192Y . . . MAP7 9053 broad.mit.edu 36 6 136722862 136722862 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198614 exon15 c.C1870T p.R624X . . . MAP3K5 4217 broad.mit.edu 36 6 137019264 137019264 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005923 exon10 c.T1554G p.I518M . . . HECA 51696 broad.mit.edu 36 6 139529469 139529469 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016217 exon2 c.G627T p.K209N . . . RNF182 221687 broad.mit.edu 36 6 14085365 14085365 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001165032 exon4 c.T36A p.S12S . . . CD83 9308 broad.mit.edu 36 6 14239886 14239886 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004233 exon3 c.A310G p.T104A . . . GPR126 57211 broad.mit.edu 36 6 142672400 142672400 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001032394 exon2 c.G29A p.S10N . . . HIVEP2 3097 broad.mit.edu 36 6 143116483 143116483 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006734 exon10 c.C6795T p.G2265G . . . AIG1 51390 broad.mit.edu 36 6 143499701 143499701 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016108 exon2 c.A178G p.T60A . . . UTRN 7402 broad.mit.edu 36 6 144845133 144845133 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007124 exon26 c.G3603T p.Q1201H . . . UTRN 7402 broad.mit.edu 36 6 144879770 144879770 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007124 exon38 c.A5534C p.K1845T . . . SHPRH 257218 broad.mit.edu 36 6 146286566 146286566 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173082 exon18 c.G3478T p.E1160X . . . SHPRH 257218 broad.mit.edu 36 6 146317800 146317800 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173082 exon2 c.G352T p.E118X . . . STXBP5 134957 broad.mit.edu 36 6 147726492 147726492 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139244 exon22 c.C2766T p.C922C . . . SASH1 23328 broad.mit.edu 36 6 148906963 148906963 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015278 exon18 c.C2664T p.V888V . . . ULBP1 80329 broad.mit.edu 36 6 150332150 150332150 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025218 exon3 c.G586T p.E196X . . . RAET1L 154064 broad.mit.edu 36 6 150383774 150383774 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130900 exon3 c.C591A p.F197L . . . MTHFD1L 25902 broad.mit.edu 36 6 151372756 151372756 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015440 exon21 c.G2234A p.R745Q . . . MTHFD1L 25902 broad.mit.edu 36 6 151397328 151397328 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015440 exon25 c.A2593C p.I865L . . . AKAP12 9590 broad.mit.edu 36 6 151713789 151713789 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005100 exon4 c.G2570T p.R857M . . . AKAP12 9590 broad.mit.edu 36 6 151714490 151714490 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005100 exon4 c.G3271A p.D1091N . . . C6orf97 80129 broad.mit.edu 36 6 151907403 151907403 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025059 exon4 c.G447A p.K149K . . . ESR1 2099 broad.mit.edu 36 6 152170765 152170765 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122741 exon2 c.G25A p.A9T . . . ESR1 2099 broad.mit.edu 36 6 152243578 152243578 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122741 exon4 c.G739A p.E247K . . . SYNE1 23345 broad.mit.edu 36 6 152517799 152517799 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133650 exon5 c.C536A p.S179Y . . . SYNE1 23345 broad.mit.edu 36 6 152564728 152564728 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon42 c.G6641A p.R2214Q . . . SYNE1 23345 broad.mit.edu 36 6 152587349 152587349 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon32 c.T5067C p.A1689A . . . SYNE1 23345 broad.mit.edu 36 6 152617840 152617840 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon19 c.G2910T p.E970D . . . SYNE1 23345 broad.mit.edu 36 6 152632071 152632071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon14 c.C2189T p.A730V . . . SYNE1 23345 broad.mit.edu 36 6 152679743 152679743 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015293 exon2 c.C216T p.V72V . . . SYNE1 23345 broad.mit.edu 36 6 152688098 152688098 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon80 c.G15258A p.E5086E . . . SYNE1 23345 broad.mit.edu 36 6 152694305 152694305 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon77 c.C12995T p.S4332L . . . SYNE1 23345 broad.mit.edu 36 6 152696891 152696891 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon76 c.A12526C p.N4176H . . . SYNE1 23345 broad.mit.edu 36 6 152715114 152715114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon70 c.C11276T p.A3759V . . . SYNE1 23345 broad.mit.edu 36 6 152730122 152730122 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon62 c.C9917T p.A3306V . . . SYNE1 23345 broad.mit.edu 36 6 152753260 152753260 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon53 c.T8046C p.G2682G . . . SYNE1 23345 broad.mit.edu 36 6 152758367 152758367 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon51 c.T7710G p.F2570L . . . SYNE1 23345 broad.mit.edu 36 6 152816483 152816483 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon25 c.C2979T p.T993T . . . SYNE1 23345 broad.mit.edu 36 6 152824551 152824551 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon21 c.G2289T p.V763V . . . SYNE1 23345 broad.mit.edu 36 6 152873193 152873193 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon8 c.G430T p.E144X . . . SYNE1 23345 broad.mit.edu 36 6 152873910 152873910 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033071 exon7 c.T352C p.S118P . . . SYNE1 23345 broad.mit.edu 36 6 152883299 152883299 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033071 exon5 c.C297T p.L99L . . . RGS17 26575 broad.mit.edu 36 6 153389305 153389305 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012419 exon3 c.G186A p.E62E . . . RBM16 22828 broad.mit.edu 36 6 155195325 155195325 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014892 exon20 c.G2920T p.D974Y . . . TIAM2 26230 broad.mit.edu 36 6 155492840 155492840 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012454 exon3 c.A791G p.E264G . . . TIAM2 26230 broad.mit.edu 36 6 155493056 155493056 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012454 exon3 c.C1007A p.A336D . . . TIAM2 26230 broad.mit.edu 36 6 155615779 155615779 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012454 exon23 c.G4125A p.S1375S . . . NOX3 50508 broad.mit.edu 36 6 155770018 155770018 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015718 exon12 c.G1518T p.K506N . . . NOX3 50508 broad.mit.edu 36 6 155806234 155806234 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015718 exon5 c.C351T p.I117I . . . SYNJ2 8871 broad.mit.edu 36 6 158407505 158407505 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178088 exon11 c.G856A p.E286K . . . SYNJ2 8871 broad.mit.edu 36 6 158430911 158430911 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178088 exon24 c.C2798T p.T933I . . . SYTL3 94120 broad.mit.edu 36 6 159086640 159086640 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009991 exon11 c.C792T p.N264N . . . RSPH3 83861 broad.mit.edu 36 6 159334894 159334894 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031924 exon2 c.C595T p.R199X . . . FNDC1 84624 broad.mit.edu 36 6 159579630 159579630 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032532 exon13 c.G4123T p.D1375Y . . . FNDC1 84624 broad.mit.edu 36 6 159592542 159592542 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032532 exon17 c.G5053T p.D1685Y . . . ACAT2 39 broad.mit.edu 36 6 160119744 160119744 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005891 exon9 c.C1087A p.L363I . . . IGF2R 3482 broad.mit.edu 36 6 160384295 160384295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon12 c.G1606A p.A536T . . . IGF2R 3482 broad.mit.edu 36 6 160391541 160391541 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon19 c.A2561C p.K854T . . . IGF2R 3482 broad.mit.edu 36 6 160431083 160431083 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000876 exon44 c.C6613T p.R2205W . . . SLC22A2 6582 broad.mit.edu 36 6 160597674 160597674 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003058 exon2 c.C480A p.F160L . . . SLC22A3 6581 broad.mit.edu 36 6 160783788 160783788 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021977 exon8 c.G1294T p.A432S . . . LPA 4018 broad.mit.edu 36 6 160886481 160886481 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005577 exon34 c.C5379A p.Y1793X . . . LPA 4018 broad.mit.edu 36 6 160886553 160886553 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005577 exon34 c.C5307T p.Y1769Y . . . AGPAT4 56895 broad.mit.edu 36 6 161507345 161507345 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020133 exon3 c.C273T p.I91I . . . PACRG 135138 broad.mit.edu 36 6 163403303 163403303 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080378 exon4 c.G423T p.K141N . . . PACRG 135138 broad.mit.edu 36 6 163655854 163655854 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080378 exon6 c.T619A p.S207T . . . QKI 9444 broad.mit.edu 36 6 163796410 163796410 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206855 exon2 c.G252A p.E84E . . . QKI 9444 broad.mit.edu 36 6 163903010 163903010 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_206855 exon5 c.G553T p.G185X . . . QKI 9444 broad.mit.edu 36 6 163904696 163904696 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206855 exon6 c.G889A p.A297T . . . QKI 9444 broad.mit.edu 36 6 163905711 163905711 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_206854 exon7 c.G957A p.M319I . . . PDE10A 10846 broad.mit.edu 36 6 165729894 165729894 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006661 exon15 c.G1293A p.T431T . . . PDE10A 10846 broad.mit.edu 36 6 165763796 165763796 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006661 exon10 c.G742A p.E248K . . . SFT2D1 113402 broad.mit.edu 36 6 166663712 166663712 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145169 exon2 c.C77A p.S26X . . . CCR6 1235 broad.mit.edu 36 6 167469857 167469857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004367 exon3 c.C149T p.P50L . . . CCR6 1235 broad.mit.edu 36 6 167470651 167470651 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004367 exon3 c.C943T p.L315F . . . UNC93A 54346 broad.mit.edu 36 6 167629625 167629625 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001143947 exon3 c.C385T p.R129C . . . THBS2 7058 broad.mit.edu 36 6 169365442 169365442 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003247 exon19 c.G2827T p.D943Y . . . THBS2 7058 broad.mit.edu 36 6 169390544 169390544 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003247 exon4 c.G502A p.D168N . . . THBS2 7058 broad.mit.edu 36 6 169390701 169390701 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003247 exon4 c.C345T p.I115I . . . THBS2 7058 broad.mit.edu 36 6 169390767 169390767 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003247 exon4 c.C279T p.D93D . . . C6orf70 55780 broad.mit.edu 36 6 169921298 169921298 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018341 exon17 c.A1835C p.E612A . . . C6orf70 55780 broad.mit.edu 36 6 169923406 169923406 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018341 exon18 c.G1909A p.E637K . . . DLL1 28514 broad.mit.edu 36 6 170434258 170434258 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005618 exon9 c.G2034A p.P678P . . . FAM120B 84498 broad.mit.edu 36 6 170468986 170468986 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032448 exon2 c.G583A p.E195K . . . FAM120B 84498 broad.mit.edu 36 6 170469061 170469061 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032448 exon2 c.G658A p.A220T . . . TBP 6908 broad.mit.edu 36 6 170712830 170712830 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003194 exon3 c.C81A p.I27I . . . FAM8A1 51439 broad.mit.edu 36 6 17716429 17716429 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016255 exon5 c.G1122T p.K374N . . . NUP153 9972 broad.mit.edu 36 6 17724782 17724782 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005124 exon21 c.C4298T p.S1433L . . . KIF13A 63971 broad.mit.edu 36 6 17879338 17879338 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022113 exon38 c.C4567T p.R1523C . . . KIF13A 63971 broad.mit.edu 36 6 17934119 17934119 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105566 exon16 c.C1645T p.R549X . . . KIF13A 63971 broad.mit.edu 36 6 17963669 17963669 + Missense_Mutation SNP G A A rs73726225 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105566 exon6 c.C472T p.R158W . . . MBOAT1 154141 broad.mit.edu 36 6 20217959 20217959 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080480 exon12 c.G1210A p.V404I . . . MBOAT1 154141 broad.mit.edu 36 6 20236922 20236922 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080480 exon6 c.C517T p.R173X . . . GMDS 2762 broad.mit.edu 36 6 2062746 2062746 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001500 exon3 c.G191A p.R64Q . . . DCDC2 51473 broad.mit.edu 36 6 24313238 24313238 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016356 exon8 c.G994T p.D332Y . . . DCDC2 51473 broad.mit.edu 36 6 24386337 24386337 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016356 exon7 c.G841T p.E281X . . . GPLD1 2822 broad.mit.edu 36 6 24553797 24553797 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001503 exon20 c.A1976C p.N659T . . . GPLD1 2822 broad.mit.edu 36 6 24556090 24556090 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001503 exon17 c.G1672A p.D558N . . . ALDH5A1 7915 broad.mit.edu 36 6 24628745 24628745 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170740 exon7 c.T1047G p.T349T . . . KIAA0319 9856 broad.mit.edu 36 6 24677133 24677133 + Silent SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168376 exon12 c.C1860G p.G620G . . . KIAA0319 9856 broad.mit.edu 36 6 24709287 24709287 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168375 exon2 c.C24T p.L8L . . . GMNN 51053 broad.mit.edu 36 6 24885471 24885471 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015895 exon2 c.G18A p.K6K . . . GMNN 51053 broad.mit.edu 36 6 24893985 24893985 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015895 exon7 c.G609A p.T203T . . . FAM65B 9750 broad.mit.edu 36 6 24951114 24951114 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014722 exon14 c.T1875C p.F625F . . . FAM65B 9750 broad.mit.edu 36 6 24951449 24951449 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014722 exon14 c.G1540A p.A514T . . . LRRC16A 55604 broad.mit.edu 36 6 25558887 25558887 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017640 exon8 c.A583C p.N195H . . . LRRC16A 55604 broad.mit.edu 36 6 25637089 25637089 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017640 exon24 c.A2056C p.T686P . . . LRRC16A 55604 broad.mit.edu 36 6 25714326 25714326 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017640 exon35 c.G3693T p.K1231N . . . HIST1H2AA 221613 broad.mit.edu 36 6 25834502 25834502 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170745 exon1 c.G233A p.R78H . . . HIST1H2BA 255626 broad.mit.edu 36 6 25835416 25835416 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170610 exon1 c.C301T p.R101C . . . SLC17A1 6568 broad.mit.edu 36 6 25906999 25906999 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005074 exon12 c.G1397A p.R466H . . . SLC17A1 6568 broad.mit.edu 36 6 25927337 25927337 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005074 exon6 c.T554C p.V185A . . . SLC17A2 10246 broad.mit.edu 36 6 26025019 26025019 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005835 exon8 c.C803T p.A268V . . . SLC17A2 10246 broad.mit.edu 36 6 26031912 26031912 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005835 exon3 c.T230G p.F77C . . . TRIM38 10475 broad.mit.edu 36 6 26080294 26080294 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006355 exon5 c.G726T p.Q242H . . . TRIM38 10475 broad.mit.edu 36 6 26091557 26091557 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006355 exon8 c.G1061A p.G354D . . . HIST1H4C 8364 broad.mit.edu 36 6 26212346 26212346 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003542 exon1 c.G192A p.E64E . . . HIST1H2BC 8347 broad.mit.edu 36 6 26231918 26231918 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003526 exon1 c.C194A p.S65Y . . . MYLK4 340156 broad.mit.edu 36 6 2630591 2630591 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012418 exon6 c.G483A p.A161A . . . HIST1H2BI 8346 broad.mit.edu 36 6 26381395 26381395 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003525 exon1 c.C213T p.F71F . . . BTN2A2 10385 broad.mit.edu 36 6 26496351 26496351 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006995 exon4 c.G574A p.A192T . . . BTN2A2 10385 broad.mit.edu 36 6 26498229 26498229 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006995 exon5 c.G742A p.A248T . . . BTN1A1 696 broad.mit.edu 36 6 26617141 26617141 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001732 exon7 c.C1341A p.F447L . . . HIST1H2BK 85236 broad.mit.edu 36 6 27222392 27222392 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080593 exon1 c.C165A p.I55I . . . PRSS16 10279 broad.mit.edu 36 6 27324915 27324915 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005865 exon4 c.G395T p.R132I . . . ZNF184 7738 broad.mit.edu 36 6 27527447 27527447 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007149 exon6 c.C1870T p.R624X . . . ZNF184 7738 broad.mit.edu 36 6 27548049 27548049 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007149 exon2 c.G4A p.E2K . . . HIST1H2BL 8340 broad.mit.edu 36 6 27883311 27883311 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003519 exon1 c.C353T p.A118V . . . OR2B2 81697 broad.mit.edu 36 6 27987039 27987039 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033057 exon1 c.A1038C p.E346D . . . OR2B6 26212 broad.mit.edu 36 6 28033280 28033280 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012367 exon1 c.C283T p.R95C . . . ZNF323 64288 broad.mit.edu 36 6 28405415 28405415 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145909 exon6 c.G25A p.D9N . . . GPX6 257202 broad.mit.edu 36 6 28580207 28580207 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182701 exon5 c.C507A p.L169L . . . SCAND3 114821 broad.mit.edu 36 6 28651340 28651340 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052923 exon3 c.G1121T p.R374I . . . ZNF311 282890 broad.mit.edu 36 6 29071373 29071373 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010877 exon7 c.G1385T p.R462I . . . ZNF311 282890 broad.mit.edu 36 6 29071826 29071826 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010877 exon7 c.C932T p.A311V . . . OR2W1 26692 broad.mit.edu 36 6 29120730 29120730 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030903 exon1 c.T202G p.F68V . . . OR2W1 26692 broad.mit.edu 36 6 29120832 29120832 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030903 exon1 c.T100G p.F34V . . . OR2J3 442186 broad.mit.edu 36 6 29188553 29188553 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005216 exon1 c.G907A p.A303T . . . OR14J1 442191 broad.mit.edu 36 6 29383070 29383070 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030946 exon1 c.T625G p.L209V . . . OR14J1 442191 broad.mit.edu 36 6 29383245 29383245 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030946 exon1 c.C800A p.T267N . . . OR12D3 81797 broad.mit.edu 36 6 29450135 29450135 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030959 exon1 c.C909A p.I303I . . . OR2H1 26716 broad.mit.edu 36 6 29538345 29538345 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030883 exon3 c.C820A p.L274I . . . OR2H2 7932 broad.mit.edu 36 6 29664250 29664250 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007160 exon1 c.C550T p.R184X . . . OR2H2 7932 broad.mit.edu 36 6 29664410 29664410 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007160 exon1 c.G710T p.G237V . . . GABBR1 2550 broad.mit.edu 36 6 29689233 29689233 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021904 exon11 c.G1146A p.Q382Q . . . MOG 4340 broad.mit.edu 36 6 29741950 29741950 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002433 exon3 c.C479T p.A160V . . . ZFP57 346171 broad.mit.edu 36 6 29748562 29748562 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001109809 exon4 c.G1305A p.W435X . . . HLA-G 3135 broad.mit.edu 36 6 29904570 29904570 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002127 exon4 c.C615T p.R205R . . . FLOT1 10211 broad.mit.edu 36 6 30817055 30817055 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005803 exon5 c.C245A p.A82E . . . BPHL 670 broad.mit.edu 36 6 3097725 3097725 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004332 exon7 c.C793T p.H265Y . . . DPCR1 135656 broad.mit.edu 36 6 31027891 31027891 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080870 exon2 c.C3671T p.A1224V . . . CCHCR1 54535 broad.mit.edu 36 6 31233172 31233172 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105563 exon1 c.G185A p.S62N . . . TNF 7124 broad.mit.edu 36 6 31653068 31653068 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000594 exon4 c.C477T p.I159I . . . BAT3 7917 broad.mit.edu 36 6 31716897 31716897 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098534 exon19 c.A2642G p.Q881R . . . LY6G6F 259215 broad.mit.edu 36 6 31785931 31785931 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001003693 exon4 c.G796T p.G266C . . . LY6G6C 80740 broad.mit.edu 36 6 31795951 31795951 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025261 exon2 c.C61T p.R21C . . . MSH5 4439 broad.mit.edu 36 6 31837299 31837299 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002441 exon22 c.C2109A p.I703I . . . HSPA1L 3305 broad.mit.edu 36 6 31887493 31887493 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005527 exon2 c.A236C p.K79T . . . SLC44A4 80736 broad.mit.edu 36 6 31941812 31941812 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178044 exon13 c.T1178G p.I393S . . . CFB 629 broad.mit.edu 36 6 32022312 32022312 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001710 exon2 c.G248A p.S83N . . . CFB 629 broad.mit.edu 36 6 32023738 32023738 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001710 exon6 c.A798G p.S266S . . . SKIV2L 6499 broad.mit.edu 36 6 32039466 32039466 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006929 exon15 c.A1624G p.T542A . . . TNXB 7148 broad.mit.edu 36 6 32147815 32147815 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019105 exon13 c.G4920T p.K1640N . . . FKBPL 63943 broad.mit.edu 36 6 32204881 32204881 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022110 exon2 c.G655T p.E219X . . . FKBPL 63943 broad.mit.edu 36 6 32205094 32205094 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022110 exon2 c.G442A p.V148I . . . BTNL2 56244 broad.mit.edu 36 6 32478799 32478799 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019602 exon3 c.C600A p.F200L . . . SLC22A23 63027 broad.mit.edu 36 6 3269085 3269085 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021945 exon5 c.T221C p.L74P . . . TAP2 6891 broad.mit.edu 36 6 32904716 32904716 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000544 exon12 c.C2006T p.A669V . . . HLA-DMA 3108 broad.mit.edu 36 6 33026397 33026397 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006120 exon2 c.G250A p.E84K . . . COL11A2 1302 broad.mit.edu 36 6 33239474 33239474 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080681 exon64 c.C4912T p.R1638W . . . COL11A2 1302 broad.mit.edu 36 6 33253419 33253419 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080681 exon20 c.T1657G p.L553V . . . COL11A2 1302 broad.mit.edu 36 6 33254679 33254679 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080681 exon15 c.T1403C p.V468A . . . SLC39A7 7922 broad.mit.edu 36 6 33279302 33279302 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006979 exon7 c.C1144T p.R382C . . . WDR46 9277 broad.mit.edu 36 6 33364597 33364597 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164267 exon2 c.G79A p.E27K . . . TAPBP 6892 broad.mit.edu 36 6 33389165 33389165 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172208 exon3 c.G276T p.E92D . . . SYNGAP1 8831 broad.mit.edu 36 6 33513491 33513491 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006772 exon8 c.G831T p.K277N . . . ITPR3 3710 broad.mit.edu 36 6 33739577 33739577 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002224 exon11 c.G1090A p.A364T . . . C6orf125 84300 broad.mit.edu 36 6 33776236 33776236 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032340 exon3 c.C246T p.G82G . . . IP6K3 117283 broad.mit.edu 36 6 33801242 33801242 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_054111 exon5 c.C719T p.A240V . . . PACSIN1 29993 broad.mit.edu 36 6 34606071 34606071 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020804 exon7 c.C862T p.R288C . . . UHRF1BP1 54887 broad.mit.edu 36 6 34911055 34911055 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017754 exon7 c.G676T p.D226Y . . . UHRF1BP1 54887 broad.mit.edu 36 6 34934264 34934264 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017754 exon14 c.T2153A p.F718Y . . . TCP11 6954 broad.mit.edu 36 6 35195083 35195083 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018679 exon9 c.G993T p.K331N . . . C6orf81 221481 broad.mit.edu 36 6 35823369 35823369 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145028 exon5 c.G738T p.K246N . . . LHFPL5 222662 broad.mit.edu 36 6 35881596 35881596 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182548 exon1 c.G171A p.P57P . . . SRPK1 6732 broad.mit.edu 36 6 35933083 35933083 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003137 exon13 c.G1553A p.R518H . . . SLC26A8 116369 broad.mit.edu 36 6 36031169 36031169 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193476 exon17 c.C1970T p.S657F . . . MAPK14 1432 broad.mit.edu 36 6 36149458 36149458 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001315 exon5 c.G430A p.A144T . . . BRPF3 27154 broad.mit.edu 36 6 36290104 36290104 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015695 exon8 c.C2952T p.S984S . . . C6orf222 389384 broad.mit.edu 36 6 36399943 36399943 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010903 exon7 c.G1171T p.E391X . . . PIM1 5292 broad.mit.edu 36 6 37248868 37248868 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002648 exon5 c.C726T p.F242F . . . TMEM217 221468 broad.mit.edu 36 6 37294613 37294613 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145316 exon2 c.A172G p.N58D . . . RNF8 9025 broad.mit.edu 36 6 37436317 37436317 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003958 exon2 c.A229G p.M77V . . . FTSJD2 23070 broad.mit.edu 36 6 37538641 37538641 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015050 exon13 c.G1384A p.A462T . . . FTSJD2 23070 broad.mit.edu 36 6 37548220 37548220 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015050 exon16 c.G1668A p.S556S . . . FTSJD2 23070 broad.mit.edu 36 6 37553382 37553382 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015050 exon21 c.G2142T p.K714N . . . BTBD9 114781 broad.mit.edu 36 6 38420770 38420770 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172418 exon7 c.A1142G p.N381S . . . DNAH8 1769 broad.mit.edu 36 6 38810314 38810314 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon3 c.G46T p.G16X . . . DNAH8 1769 broad.mit.edu 36 6 38933327 38933327 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon40 c.G5138A p.R1713H . . . DNAH8 1769 broad.mit.edu 36 6 38942389 38942389 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon44 c.A5892C p.K1964N . . . DNAH8 1769 broad.mit.edu 36 6 38966409 38966409 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon56 c.T7826G p.I2609S . . . DNAH8 1769 broad.mit.edu 36 6 39007623 39007623 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001371 exon74 c.C10682T p.T3561M . . . KIF6 221458 broad.mit.edu 36 6 39615835 39615835 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145027 exon13 c.C1567T p.R523X . . . PRPF4B 8899 broad.mit.edu 36 6 3989203 3989203 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003913 exon6 c.T1808G p.F603C . . . LRFN2 57497 broad.mit.edu 36 6 40508260 40508260 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020737 exon2 c.G571T p.G191C . . . UNC5CL 222643 broad.mit.edu 36 6 41106386 41106386 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173561 exon7 c.G1206A p.P402P . . . TREML1 340205 broad.mit.edu 36 6 41229496 41229496 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178174 exon2 c.C354A p.V118V . . . PGC 5225 broad.mit.edu 36 6 41812573 41812573 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002630 exon9 c.G1162A p.A388T . . . PGC 5225 broad.mit.edu 36 6 41818148 41818148 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002630 exon5 c.A505G p.T169A . . . UBR2 23304 broad.mit.edu 36 6 42723866 42723866 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015255 exon22 c.C2442T p.I814I . . . UBR2 23304 broad.mit.edu 36 6 42735557 42735557 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015255 exon30 c.T3428G p.F1143C . . . TBCC 6903 broad.mit.edu 36 6 42820861 42820861 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003192 exon1 c.G929T p.R310M . . . PTCRA 171558 broad.mit.edu 36 6 43001313 43001313 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138296 exon4 c.G761T p.R254I . . . MEA1 4201 broad.mit.edu 36 6 43089047 43089047 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014623 exon2 c.C87A p.I29I . . . EXOC2 55770 broad.mit.edu 36 6 431720 431720 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018303 exon28 c.T2726C p.L909S . . . PTK7 5754 broad.mit.edu 36 6 43205520 43205520 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152882 exon3 c.C445T p.R149C . . . CUL9 23113 broad.mit.edu 36 6 43264394 43264394 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015089 exon8 c.C2143T p.R715W . . . TTBK1 84630 broad.mit.edu 36 6 43333587 43333587 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032538 exon10 c.C921A p.A307A . . . ABCC10 89845 broad.mit.edu 36 6 43514441 43514441 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198934 exon8 c.T2057G p.F686C . . . ABCC10 89845 broad.mit.edu 36 6 43524865 43524865 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198934 exon20 c.C4148A p.S1383Y . . . RSPH9 221421 broad.mit.edu 36 6 43731294 43731294 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152732 exon3 c.G411T p.E137D . . . MRPL14 64928 broad.mit.edu 36 6 44189684 44189684 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032111 exon3 c.C312T p.N104N . . . TMEM63B 55362 broad.mit.edu 36 6 44230124 44230124 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018426 exon23 c.A2271G p.G757G . . . HSP90AB1 3326 broad.mit.edu 36 6 44329210 44329210 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007355 exon12 c.A2072G p.D691G . . . NFKBIE 4794 broad.mit.edu 36 6 44336192 44336192 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004556 exon4 c.C1171T p.R391W . . . TCTE1 202500 broad.mit.edu 36 6 44356060 44356060 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182539 exon5 c.C1342A p.L448I . . . AARS2 57505 broad.mit.edu 36 6 44376909 44376909 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020745 exon21 c.C2755T p.P919S . . . SUPT3H 8464 broad.mit.edu 36 6 45037525 45037525 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181356 exon9 c.C556T p.R186X . . . TDRD6 221400 broad.mit.edu 36 6 46767004 46767004 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168359 exon1 c.G3180A p.K1060K . . . TDRD6 221400 broad.mit.edu 36 6 46767759 46767759 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001168359 exon1 c.C3935A p.S1312Y . . . MEP1A 4224 broad.mit.edu 36 6 46908830 46908830 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005588 exon11 c.G1205A p.R402H . . . TNFRSF21 27242 broad.mit.edu 36 6 47328977 47328977 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014452 exon4 c.C1483T p.R495C . . . CD2AP 23607 broad.mit.edu 36 6 47579032 47579032 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012120 exon2 c.G62A p.R21Q . . . CD2AP 23607 broad.mit.edu 36 6 47609382 47609382 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012120 exon3 c.G251A p.R84Q . . . CD2AP 23607 broad.mit.edu 36 6 47620401 47620401 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012120 exon4 c.G420T p.E140D . . . GPR111 222611 broad.mit.edu 36 6 47757152 47757152 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153839 exon7 c.G694T p.D232Y . . . C6orf138 442213 broad.mit.edu 36 6 47954071 47954071 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013732 exon3 c.C2468A p.A823D . . . C6orf138 442213 broad.mit.edu 36 6 48084634 48084634 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013732 exon2 c.T602G p.L201R . . . RPP40 10799 broad.mit.edu 36 6 4940491 4940491 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006638 exon8 c.G912A p.P304P . . . PGK2 5232 broad.mit.edu 36 6 49862035 49862035 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138733 exon1 c.G825T p.K275N . . . PGK2 5232 broad.mit.edu 36 6 49862493 49862493 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138733 exon1 c.C367T p.R123C . . . PKHD1 5314 broad.mit.edu 36 6 51717145 51717145 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon60 c.G10153A p.A3385T . . . PKHD1 5314 broad.mit.edu 36 6 51717297 51717297 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon60 c.A10001C p.K3334T . . . PKHD1 5314 broad.mit.edu 36 6 51719516 51719516 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170724 exon59 c.A9960G p.K3320K . . . PKHD1 5314 broad.mit.edu 36 6 51884692 51884692 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170724 exon39 c.G6354T p.E2118D . . . EXOC2 55770 broad.mit.edu 36 6 521760 521760 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018303 exon12 c.G1315A p.D439N . . . EFHC1 114327 broad.mit.edu 36 6 52426970 52426970 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018100 exon5 c.G842A p.R281Q . . . GCM1 8521 broad.mit.edu 36 6 53101293 53101293 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003643 exon6 c.C981A p.F327L . . . GCLC 2729 broad.mit.edu 36 6 53473216 53473216 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197115 exon12 c.T1336C p.F446L . . . GCLC 2729 broad.mit.edu 36 6 53481977 53481977 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197115 exon6 c.G670A p.A224T . . . C6orf142 90523 broad.mit.edu 36 6 54203499 54203499 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138569 exon11 c.C1142T p.S381L . . . FAM83B 222584 broad.mit.edu 36 6 54899182 54899182 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010872 exon3 c.G499A p.V167I . . . HCRTR2 3062 broad.mit.edu 36 6 55255178 55255178 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001526 exon7 c.A1302G p.A434A . . . HMGCLL1 54511 broad.mit.edu 36 6 55486854 55486854 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019036 exon6 c.T583A p.F195I . . . BMP5 653 broad.mit.edu 36 6 55728309 55728309 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021073 exon7 c.G1346A p.R449H . . . COL21A1 81578 broad.mit.edu 36 6 56140884 56140884 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030820 exon6 c.T1197G p.V399V . . . COL21A1 81578 broad.mit.edu 36 6 56143826 56143826 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030820 exon4 c.C700A p.L234I . . . DST 667 broad.mit.edu 36 6 56533160 56533160 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon39 c.G6462A p.K2154K . . . DST 667 broad.mit.edu 36 6 56566840 56566840 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon29 c.G4437T p.E1479D . . . DST 667 broad.mit.edu 36 6 56571244 56571244 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon27 c.G4048T p.E1350X . . . DST 667 broad.mit.edu 36 6 56589226 56589226 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001723 exon24 c.T6998C p.V2333A . . . DST 667 broad.mit.edu 36 6 56591420 56591420 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001723 exon23 c.G5371T p.E1791X . . . DST 667 broad.mit.edu 36 6 56592197 56592197 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001723 exon23 c.G4594T p.E1532X . . . DST 667 broad.mit.edu 36 6 56605727 56605727 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon14 c.T2078G p.F693C . . . DST 667 broad.mit.edu 36 6 56612218 56612218 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015548 exon7 c.G1237T p.D413Y . . . ZNF451 26036 broad.mit.edu 36 6 57101540 57101540 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031623 exon5 c.G367T p.G123X . . . PRIM2 5558 broad.mit.edu 36 6 57354873 57354873 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000947 exon7 c.T641A p.I214N . . . PRIM2 5558 broad.mit.edu 36 6 57480269 57480269 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000947 exon8 c.C716T p.A239V . . . EXOC2 55770 broad.mit.edu 36 6 582784 582784 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018303 exon2 c.G35A p.G12D . . . F13A1 2162 broad.mit.edu 36 6 6141036 6141036 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000129 exon10 c.T1298C p.F433S . . . KHDRBS2 202559 broad.mit.edu 36 6 62662515 62662515 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152688 exon6 c.A794G p.E265G . . . LGSN 51557 broad.mit.edu 36 6 64047907 64047907 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016571 exon4 c.A1508C p.K503T . . . PTP4A1 7803 broad.mit.edu 36 6 64344828 64344828 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003463 exon2 c.G84A p.A28A . . . PHF3 23469 broad.mit.edu 36 6 64452886 64452886 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon3 c.T1304C p.I435T . . . PHF3 23469 broad.mit.edu 36 6 64459796 64459796 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon4 c.G2400T p.M800I . . . PHF3 23469 broad.mit.edu 36 6 64479672 64479672 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon15 c.G4229T p.R1410I . . . PHF3 23469 broad.mit.edu 36 6 64480630 64480630 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon15 c.G5187T p.Q1729H . . . PHF3 23469 broad.mit.edu 36 6 64481315 64481315 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015153 exon15 c.G5872T p.D1958Y . . . BAI3 577 broad.mit.edu 36 6 69760460 69760460 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001704 exon11 c.T1814C p.L605S . . . B3GAT2 135152 broad.mit.edu 36 6 71628275 71628275 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080742 exon3 c.G864A p.P288P . . . SSR1 6745 broad.mit.edu 36 6 7235154 7235154 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003144 exon8 c.C803T p.S268L . . . RIMS1 22999 broad.mit.edu 36 6 72946305 72946305 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014989 exon5 c.T778C p.S260P . . . RIMS1 22999 broad.mit.edu 36 6 73057229 73057229 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014989 exon25 c.T3681G p.C1227W . . . KCNQ5 56479 broad.mit.edu 36 6 73961222 73961222 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160133 exon15 c.C2220T p.S740S . . . OOEP 441161 broad.mit.edu 36 6 74136074 74136074 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080507 exon1 c.G163T p.E55X . . . C6orf150 115004 broad.mit.edu 36 6 74212148 74212148 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138441 exon2 c.T701C p.V234A . . . CD109 135228 broad.mit.edu 36 6 74534523 74534523 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133493 exon14 c.G1522A p.A508T . . . CD109 135228 broad.mit.edu 36 6 74554979 74554979 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133493 exon22 c.G2624A p.S875N . . . DSP 1832 broad.mit.edu 36 6 7530651 7530651 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008844 exon24 c.G6360A p.P2120P . . . COL12A1 1303 broad.mit.edu 36 6 75883860 75883860 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080645 exon32 c.G3985A p.E1329K . . . COL12A1 1303 broad.mit.edu 36 6 75912599 75912599 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080645 exon9 c.C1007T p.A336V . . . COL12A1 1303 broad.mit.edu 36 6 75932173 75932173 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004370 exon14 c.A2753C p.D918A . . . COL12A1 1303 broad.mit.edu 36 6 75949971 75949971 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004370 exon10 c.G1406T p.S469I . . . COL12A1 1303 broad.mit.edu 36 6 75961290 75961290 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004370 exon3 c.G167T p.R56I . . . FILIP1 27145 broad.mit.edu 36 6 76078888 76078888 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015687 exon5 c.G3380T p.S1127I . . . MYO6 4646 broad.mit.edu 36 6 76589273 76589273 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004999 exon3 c.G172T p.D58Y . . . MYO6 4646 broad.mit.edu 36 6 76680598 76680598 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004999 exon34 c.G3538A p.D1180N . . . IMPG1 3617 broad.mit.edu 36 6 76808354 76808354 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001563 exon2 c.C277T p.L93F . . . IMPG1 3617 broad.mit.edu 36 6 76838885 76838885 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001563 exon1 c.T41G p.I14S . . . HTR1B 3351 broad.mit.edu 36 6 78229800 78229800 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000863 exon1 c.G40A p.A14T . . . TXNDC5 81567 broad.mit.edu 36 6 7849928 7849928 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030810 exon2 c.G291A p.P97P . . . PHIP 55023 broad.mit.edu 36 6 79707464 79707464 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon40 c.C5131T p.R1711C . . . PHIP 55023 broad.mit.edu 36 6 79749336 79749336 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon23 c.G2755T p.E919X . . . PHIP 55023 broad.mit.edu 36 6 79754715 79754715 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017934 exon21 c.G2390A p.R797H . . . IBTK 25998 broad.mit.edu 36 6 82982609 82982609 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015525 exon11 c.C1504T p.R502X . . . SLC35B3 51000 broad.mit.edu 36 6 8360173 8360173 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001142541 exon10 c.C1022T p.S341L . . . PGM3 5238 broad.mit.edu 36 6 83957291 83957291 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015599 exon2 c.A160C p.K54Q . . . PRSS35 167681 broad.mit.edu 36 6 84290867 84290867 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170423 exon3 c.G988A p.E330K . . . SNAP91 9892 broad.mit.edu 36 6 84360105 84360105 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014841 exon17 c.A1507G p.T503A . . . RIPPLY2 134701 broad.mit.edu 36 6 84623822 84623822 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009994 exon4 c.A382C p.N128H . . . KIAA1009 22832 broad.mit.edu 36 6 84941671 84941671 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014895 exon14 c.C1778T p.S593F . . . TBX18 9096 broad.mit.edu 36 6 85503188 85503188 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080508 exon8 c.C1758A p.F586L . . . SYNCRIP 10492 broad.mit.edu 36 6 86381465 86381465 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001159673 exon10 c.G1306A p.G436S . . . HTR1E 3354 broad.mit.edu 36 6 87782083 87782083 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000865 exon2 c.C312A p.T104T . . . ZNF292 23036 broad.mit.edu 36 6 87985115 87985115 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon4 c.A485C p.K162T . . . ZNF292 23036 broad.mit.edu 36 6 88022058 88022058 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.C1992A p.S664S . . . ZNF292 23036 broad.mit.edu 36 6 88022402 88022402 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.C2336T p.A779V . . . ZNF292 23036 broad.mit.edu 36 6 88024643 88024643 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.C4577T p.T1526M . . . ZNF292 23036 broad.mit.edu 36 6 88025482 88025482 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.T5416G p.L1806V . . . ZNF292 23036 broad.mit.edu 36 6 88026409 88026409 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015021 exon8 c.C6343T p.R2115X . . . C6orf165 154313 broad.mit.edu 36 6 88176370 88176370 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031743 exon2 c.C94A p.L32M . . . C6orf165 154313 broad.mit.edu 36 6 88230492 88230492 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031743 exon13 c.A1674C p.Q558H . . . ORC3 23595 broad.mit.edu 36 6 88382816 88382816 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001197259 exon8 c.C510A p.I170I . . . AKIRIN2 55122 broad.mit.edu 36 6 88444277 88444277 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018064 exon3 c.A507C p.E169D . . . CNR1 1268 broad.mit.edu 36 6 88911459 88911459 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160259 exon2 c.C254A p.S85Y . . . SRSF12 135295 broad.mit.edu 36 6 89871611 89871611 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080743 exon4 c.G362A p.R121Q . . . GABRR1 2569 broad.mit.edu 36 6 89956647 89956647 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002042 exon6 c.G611A p.R204Q . . . GABRR2 2570 broad.mit.edu 36 6 90034120 90034120 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002043 exon6 c.A808G p.T270A . . . RRAGD 58528 broad.mit.edu 36 6 90153874 90153874 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021244 exon2 c.C303T p.C101C . . . MDN1 23195 broad.mit.edu 36 6 90491799 90491799 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon38 c.A5510C p.N1837T . . . MDN1 23195 broad.mit.edu 36 6 90525291 90525291 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon18 c.C2570A p.S857Y . . . MDN1 23195 broad.mit.edu 36 6 90585990 90585990 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014611 exon1 c.A58G p.N20D . . . CASP8AP2 9994 broad.mit.edu 36 6 90630115 90630115 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137667 exon7 c.G1966A p.E656K . . . CASP8AP2 9994 broad.mit.edu 36 6 90637787 90637787 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001137667 exon9 c.T5851G p.F1951V . . . GJA10 84694 broad.mit.edu 36 6 90662512 90662512 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032602 exon1 c.C1604T p.S535L . . . BACH2 60468 broad.mit.edu 36 6 90716850 90716850 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021813 exon7 c.C1696A p.L566M . . . EPHA7 2045 broad.mit.edu 36 6 94035968 94035968 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004440 exon7 c.T1581G p.S527R . . . KLHL32 114792 broad.mit.edu 36 6 97521661 97521661 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052904 exon2 c.C4T p.P2S . . . KLHL32 114792 broad.mit.edu 36 6 97668600 97668600 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052904 exon7 c.A848T p.K283I . . . C6orf167 253714 broad.mit.edu 36 6 97783683 97783683 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198468 exon14 c.A1847C p.Q616P . . . SFRS18 25957 broad.mit.edu 36 6 99965477 99965477 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032870 exon5 c.C362A p.P121H . . . LACE1 246269 broad.mit.edu 36 6 108783662 108783662 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SYCP2L 221711 broad.mit.edu 36 6 11039709 11039709 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . WASF1 8936 broad.mit.edu 36 6 110534961 110534961 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RPF2 84154 broad.mit.edu 36 6 111453287 111453287 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . WISP3 8838 broad.mit.edu 36 6 112494933 112494933 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LAMA4 3910 broad.mit.edu 36 6 112550102 112550102 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LAMA4 3910 broad.mit.edu 36 6 112586787 112586787 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . LAMA4 3910 broad.mit.edu 36 6 112641940 112641940 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . NKAIN2 154215 broad.mit.edu 36 6 124645992 124645992 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STL 7955 broad.mit.edu 36 6 125273274 125273274 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STL 7955 broad.mit.edu 36 6 125274084 125274084 + RNA SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PTPRK 5796 broad.mit.edu 36 6 128600863 128600863 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STX7 8417 broad.mit.edu 36 6 132833399 132833399 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . VNN3 55350 broad.mit.edu 36 6 133085864 133085864 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . VNN2 8875 broad.mit.edu 36 6 133120497 133120497 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KIAA1244 57221 broad.mit.edu 36 6 138661432 138661432 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . REPS1 85021 broad.mit.edu 36 6 139271658 139271658 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SYNE1 23345 broad.mit.edu 36 6 152730037 152730037 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SYNE1 23345 broad.mit.edu 36 6 152824420 152824420 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TIAM2 26230 broad.mit.edu 36 6 155603543 155603543 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TCP1 6950 broad.mit.edu 36 6 160121458 160121458 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TCP1 6950 broad.mit.edu 36 6 160126719 160126719 + RNA SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MRPL18 29074 broad.mit.edu 36 6 160131671 160131671 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PLG 5340 broad.mit.edu 36 6 161043380 161043380 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . QKI 9444 broad.mit.edu 36 6 163906994 163906994 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . QKI 9444 broad.mit.edu 36 6 163907735 163907735 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PDE10A 10846 broad.mit.edu 36 6 165749666 165749666 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BRP44L 51660 broad.mit.edu 36 6 166698939 166698939 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PHF10 55274 broad.mit.edu 36 6 169846023 169846023 + 3'UTR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PRL 5617 broad.mit.edu 36 6 22398566 22398566 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DCDC2 51473 broad.mit.edu 36 6 24461773 24461773 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . KIAA0319 9856 broad.mit.edu 36 6 24691917 24691917 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GMNN 51053 broad.mit.edu 36 6 24893844 24893844 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BTN2A3 54718 broad.mit.edu 36 6 26539553 26539553 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GPX6 257202 broad.mit.edu 36 6 28582186 28582186 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SCAND3 114821 broad.mit.edu 36 6 28648122 28648122 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SCAND3 114821 broad.mit.edu 36 6 28648262 28648262 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SCAND3 114821 broad.mit.edu 36 6 28649015 28649015 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 6 29339486 29339486 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GABBR1 2550 broad.mit.edu 36 6 29688989 29688989 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MOG 4340 broad.mit.edu 36 6 29746485 29746485 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FLOT1 10211 broad.mit.edu 36 6 30806667 30806667 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . VARS2 57176 broad.mit.edu 36 6 30991809 30991809 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HCG27 253018 broad.mit.edu 36 6 31278531 31278531 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C6orf81 221481 broad.mit.edu 36 6 35813774 35813774 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RNF8 9025 broad.mit.edu 36 6 37466495 37466495 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MDGA1 266727 broad.mit.edu 36 6 37714425 37714425 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNAH8 1769 broad.mit.edu 36 6 38798833 38798833 + 5'UTR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DNAH8 1769 broad.mit.edu 36 6 38867440 38867440 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DNAH8 1769 broad.mit.edu 36 6 38985509 38985509 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRPF4B 8899 broad.mit.edu 36 6 3997943 3997943 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RPL7L1 285855 broad.mit.edu 36 6 42959340 42959340 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CAPN11 11131 broad.mit.edu 36 6 44255351 44255351 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CDC5L 988 broad.mit.edu 36 6 44498529 44498529 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CYP39A1 51302 broad.mit.edu 36 6 46629557 46629557 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . OPN5 221391 broad.mit.edu 36 6 47867668 47867668 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RHAG 6005 broad.mit.edu 36 6 49686823 49686823 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TFAP2B 7021 broad.mit.edu 36 6 50894651 50894651 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GCLC 2729 broad.mit.edu 36 6 53473281 53473281 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DST 667 broad.mit.edu 36 6 56576132 56576132 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DST 667 broad.mit.edu 36 6 56577856 56577856 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DST 667 broad.mit.edu 36 6 56618746 56618746 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DST 667 broad.mit.edu 36 6 56824218 56824218 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DST 667 broad.mit.edu 36 6 56873354 56873354 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAB23 51715 broad.mit.edu 36 6 57180374 57180374 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EYS 346007 broad.mit.edu 36 6 66169082 66169082 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RIMS1 22999 broad.mit.edu 36 6 73017523 73017523 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FILIP1 27145 broad.mit.edu 36 6 76081645 76081645 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MYO6 4646 broad.mit.edu 36 6 76678108 76678108 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BMP6 654 broad.mit.edu 36 6 7790365 7790365 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RNGTT 8732 broad.mit.edu 36 6 89657046 89657046 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MDN1 23195 broad.mit.edu 36 6 90444143 90444143 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TAS2R39 259285 broad.mit.edu 36 7 142590743 142590743 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T - T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_176881 exon1 c.110delT p.I37fs . . . FBXO24 26261 broad.mit.edu 36 7 100036156 100036156 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163499 exon10 c.G1405A p.D469N . . . ZAN 7455 broad.mit.edu 36 7 100188659 100188659 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173059 exon14 c.G2995T p.A999S . . . SLC12A9 56996 broad.mit.edu 36 7 100295774 100295774 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020246 exon9 c.C1202A p.S401Y . . . TRIP6 7205 broad.mit.edu 36 7 100306169 100306169 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003302 exon6 c.T867C p.D289D . . . MUC17 140453 broad.mit.edu 36 7 100468886 100468886 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040105 exon3 c.C7469A p.S2490Y . . . MUC17 140453 broad.mit.edu 36 7 100488008 100488008 + Missense_Mutation SNP G A A rs9656065 byCluster;byFrequency;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040105 exon13 c.G13445A p.R4482Q . . . LRWD1 222229 broad.mit.edu 36 7 101893656 101893656 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152892 exon3 c.C366A p.V122V . . . FBXL13 222235 broad.mit.edu 36 7 102456382 102456382 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001111038 exon4 c.A118T p.K40X . . . PSMC2 5701 broad.mit.edu 36 7 102795141 102795141 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002803 exon10 c.G890T p.R297I . . . RELN 5649 broad.mit.edu 36 7 102911348 102911348 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173054 exon62 c.A10169G p.Y3390C . . . RELN 5649 broad.mit.edu 36 7 102925773 102925773 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173054 exon54 c.C8830A p.L2944I . . . RELN 5649 broad.mit.edu 36 7 102928471 102928471 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173054 exon53 c.C8624T p.P2875L . . . RELN 5649 broad.mit.edu 36 7 103079363 103079363 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173054 exon15 c.T1873C p.S625P . . . MLL5 55904 broad.mit.edu 36 7 104504835 104504835 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182931 exon10 c.G958A p.D320N . . . MLL5 55904 broad.mit.edu 36 7 104536650 104536650 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182931 exon23 c.G3494T p.R1165I . . . MLL5 55904 broad.mit.edu 36 7 104539700 104539700 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182931 exon27 c.G4261A p.V1421I . . . PUS7 54517 broad.mit.edu 36 7 104893035 104893035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019042 exon13 c.C1588T p.P530S . . . NAMPT 10135 broad.mit.edu 36 7 105691186 105691186 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005746 exon7 c.C857T p.A286V . . . PIK3CG 5294 broad.mit.edu 36 7 106296775 106296775 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002649 exon2 c.G1533T p.E511D PIK3CG,lung,NS,Substitution - Missense,+2 . . HBP1 26959 broad.mit.edu 36 7 106627939 106627939 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012257 exon10 c.A1484C p.K495T . . . SLC26A4 5172 broad.mit.edu 36 7 107116757 107116757 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000441 exon9 c.C1025A p.P342H . . . LAMB4 22798 broad.mit.edu 36 7 107490614 107490614 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007356 exon23 c.C3123T p.C1041C . . . NRCAM 4897 broad.mit.edu 36 7 107577608 107577608 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193583 exon30 c.A3562C p.M1188L . . . NRCAM 4897 broad.mit.edu 36 7 107653969 107653969 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001193583 exon9 c.G640A p.E214K . . . THAP5 168451 broad.mit.edu 36 7 107992254 107992254 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182529 exon3 c.G679T p.E227X . . . DNAJB9 4189 broad.mit.edu 36 7 107999512 107999512 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012328 exon2 c.T106G p.S36A . . . NDUFA4 4697 broad.mit.edu 36 7 10944982 10944982 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002489 exon2 c.G109A p.A37T . . . DOCK4 9732 broad.mit.edu 36 7 111187599 111187599 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014705 exon39 c.T4009G p.C1337G . . . IFRD1 3475 broad.mit.edu 36 7 111902752 111902752 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001550 exon12 c.G1298A p.R433Q . . . TMEM168 64418 broad.mit.edu 36 7 112200287 112200287 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022484 exon4 c.C1331A p.S444Y . . . TMEM168 64418 broad.mit.edu 36 7 112212107 112212107 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022484 exon2 c.T10G p.S4A . . . PPP1R3A 5506 broad.mit.edu 36 7 113306905 113306905 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002711 exon4 c.C1478T p.T493M . . . FOXP2 93986 broad.mit.edu 36 7 114058925 114058925 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001172766 exon6 c.G701A p.S234N . . . FOXP2 93986 broad.mit.edu 36 7 114081218 114081218 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001172766 exon10 c.T1181G p.L394R . . . THSD7A 221981 broad.mit.edu 36 7 11599449 11599449 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015204 exon3 c.G1228T p.E410X . . . MET 4233 broad.mit.edu 36 7 116126982 116126982 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000245 exon2 c.C608A p.S203Y . . . MET 4233 broad.mit.edu 36 7 116184764 116184764 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000245 exon7 c.T1900C p.F634L . . . ASZ1 136991 broad.mit.edu 36 7 116854737 116854737 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130768 exon1 c.C14T p.A5V . . . CFTR 1080 broad.mit.edu 36 7 116986821 116986821 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000492 exon11 c.G1460T p.R487I . . . CFTR 1080 broad.mit.edu 36 7 117054948 117054948 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000492 exon22 c.A3605G p.D1202G . . . CTTNBP2 83992 broad.mit.edu 36 7 117194403 117194403 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033427 exon9 c.C2842T p.R948W . . . CTTNBP2 83992 broad.mit.edu 36 7 117219996 117219996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033427 exon4 c.C490T p.R164C . . . NAA38 51691 broad.mit.edu 36 7 117612973 117612973 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016200 exon2 c.A61G p.R21G . . . ANKRD7 56311 broad.mit.edu 36 7 117662124 117662124 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019644 exon3 c.A428C p.K143T . . . ANKRD7 56311 broad.mit.edu 36 7 117663436 117663436 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019644 exon4 c.A574C p.R192R . . . KCND2 3751 broad.mit.edu 36 7 120173183 120173183 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012281 exon5 c.C1581T p.S527S . . . C7orf58 79974 broad.mit.edu 36 7 120671522 120671522 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105533 exon17 c.C2204T p.S735L . . . C7orf58 79974 broad.mit.edu 36 7 120694512 120694512 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024913 exon21 c.T2641G p.L881V . . . WNT16 51384 broad.mit.edu 36 7 120766444 120766444 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016087 exon4 c.C877A p.P293T . . . PTPRZ1 5803 broad.mit.edu 36 7 121439849 121439849 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002851 exon12 c.G3513T p.E1171D . . . PTPRZ1 5803 broad.mit.edu 36 7 121440344 121440344 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002851 exon12 c.T4008G p.I1336M . . . PTPRZ1 5803 broad.mit.edu 36 7 121446533 121446533 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002851 exon13 c.C4963A p.L1655I . . . AASS 10157 broad.mit.edu 36 7 121505227 121505227 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005763 exon23 c.A2563C p.T855P . . . AASS 10157 broad.mit.edu 36 7 121508829 121508829 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005763 exon20 c.G2241A p.A747A . . . AASS 10157 broad.mit.edu 36 7 121540910 121540910 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005763 exon10 c.G1144T p.D382Y . . . FEZF1 389549 broad.mit.edu 36 7 121731349 121731349 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001024613 exon1 c.C379T p.L127F . . . RNF133 168433 broad.mit.edu 36 7 122125912 122125912 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_139175 exon1 c.G297A p.E99E . . . IQUB 154865 broad.mit.edu 36 7 122888807 122888807 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178827 exon11 c.C1847A p.S616X . . . IQUB 154865 broad.mit.edu 36 7 122939579 122939579 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178827 exon2 c.G52T p.E18X . . . WASL 8976 broad.mit.edu 36 7 123131941 123131941 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003941 exon5 c.G443T p.R148I . . . WASL 8976 broad.mit.edu 36 7 123134032 123134032 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003941 exon3 c.G337T p.D113Y . . . GPR37 2861 broad.mit.edu 36 7 124191645 124191645 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005302 exon1 c.G622A p.E208K . . . GRM8 2918 broad.mit.edu 36 7 125960422 125960422 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon9 c.T2250G p.I750M . . . GRM8 2918 broad.mit.edu 36 7 126329893 126329893 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon6 c.G1095T p.E365D . . . GRM8 2918 broad.mit.edu 36 7 126670406 126670406 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127323 exon2 c.G89T p.R30I . . . PAX4 5078 broad.mit.edu 36 7 127041153 127041153 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006193 exon4 c.T431C p.V144A . . . SND1 27044 broad.mit.edu 36 7 127132144 127132144 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014390 exon8 c.G856T p.E286X . . . LRRC4 64101 broad.mit.edu 36 7 127457140 127457140 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022143 exon2 c.G790T p.G264W . . . OPN1SW 611 broad.mit.edu 36 7 128202770 128202770 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001708 exon1 c.G311A p.R104H . . . CCDC136 64753 broad.mit.edu 36 7 128228762 128228762 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022742 exon4 c.C633T p.S211S . . . FLNC 2318 broad.mit.edu 36 7 128272336 128272336 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001458 exon21 c.C3581T p.S1194L . . . FLNC 2318 broad.mit.edu 36 7 128276132 128276132 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001458 exon28 c.G4787A p.G1596D . . . AHCYL2 23382 broad.mit.edu 36 7 128816215 128816215 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130722 exon3 c.C249A p.F83L . . . NRF1 4899 broad.mit.edu 36 7 129084455 129084455 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005011 exon2 c.G28A p.E10K . . . ZC3HC1 51530 broad.mit.edu 36 7 129450738 129450738 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016478 exon8 c.T1082C p.V361A . . . CPA4 51200 broad.mit.edu 36 7 129720316 129720316 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163446 exon1 c.A60C p.K20N . . . TSGA14 95681 broad.mit.edu 36 7 129827154 129827154 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018718 exon10 c.A935G p.Y312C . . . PLXNA4 91584 broad.mit.edu 36 7 131481894 131481894 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020911 exon28 c.A4970G p.N1657S . . . PLXNA4 91584 broad.mit.edu 36 7 131633419 131633419 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020911 exon4 c.G1474A p.E492K . . . EXOC4 60412 broad.mit.edu 36 7 132624269 132624269 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037126 exon3 c.G330A p.E110E . . . LRGUK 136332 broad.mit.edu 36 7 133519109 133519109 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144648 exon11 c.G1298A p.R433H . . . LRGUK 136332 broad.mit.edu 36 7 133557114 133557114 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144648 exon16 c.G1887T p.K629N . . . AKR1B15 441282 broad.mit.edu 36 7 133910712 133910712 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080538 exon7 c.G514A p.A172T . . . CALD1 800 broad.mit.edu 36 7 134276475 134276475 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004342 exon6 c.G714A p.S238S . . . C7orf49 78996 broad.mit.edu 36 7 134504123 134504123 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024033 exon2 c.C92T p.A31V . . . WDR91 29062 broad.mit.edu 36 7 134528883 134528883 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014149 exon10 c.G1477A p.D493N . . . STRA8 346673 broad.mit.edu 36 7 134567322 134567322 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182489 exon1 c.C52A p.L18M . . . NUP205 23165 broad.mit.edu 36 7 134909012 134909012 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015135 exon3 c.A242G p.Q81R . . . NUP205 23165 broad.mit.edu 36 7 134911695 134911695 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015135 exon4 c.G481T p.E161X . . . NUP205 23165 broad.mit.edu 36 7 134941493 134941493 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015135 exon20 c.G2884T p.E962X . . . NUP205 23165 broad.mit.edu 36 7 134953799 134953799 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015135 exon28 c.G3871T p.E1291X . . . SLC13A4 26266 broad.mit.edu 36 7 135041503 135041503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012450 exon4 c.G451A p.V151M . . . CHRM2 1129 broad.mit.edu 36 7 136350847 136350847 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001006626 exon5 c.C695T p.S232F . . . CREB3L2 64764 broad.mit.edu 36 7 137217730 137217730 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194071 exon11 c.G1455T p.E485D . . . ATP6V0A4 50617 broad.mit.edu 36 7 138084560 138084560 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130840 exon11 c.C1072T p.Q358X . . . KIAA1549 57670 broad.mit.edu 36 7 138234264 138234264 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164665 exon9 c.G3824A p.R1275Q . . . KIAA1549 57670 broad.mit.edu 36 7 138254482 138254482 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164665 exon2 c.T430C p.S144P . . . KLRG2 346689 broad.mit.edu 36 7 138815513 138815513 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198508 exon2 c.T778C p.S260P . . . ETV1 2115 broad.mit.edu 36 7 13937817 13937817 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163149 exon7 c.C583T p.R195C . . . DENND2A 27147 broad.mit.edu 36 7 139893200 139893200 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015689 exon11 c.T2046C p.D682D . . . WEE2 494551 broad.mit.edu 36 7 141055088 141055088 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001105558 exon1 c.G61A p.E21K . . . TAS2R4 50832 broad.mit.edu 36 7 141125204 141125204 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016944 exon1 c.G447A p.T149T . . . PRSS37 136242 broad.mit.edu 36 7 141185632 141185632 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171951 exon2 c.C151A p.L51M . . . OR9A4 130075 broad.mit.edu 36 7 141265372 141265372 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001656 exon1 c.C228T p.I76I . . . CLEC5A 23601 broad.mit.edu 36 7 141290226 141290226 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013252 exon4 c.G147T p.Q49H . . . MGAM 8972 broad.mit.edu 36 7 141394112 141394112 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004668 exon22 c.G2557T p.E853X . . . MGAM 8972 broad.mit.edu 36 7 141405832 141405832 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004668 exon32 c.G3911A p.R1304H . . . DGKB 1607 broad.mit.edu 36 7 14155355 14155355 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004080 exon25 c.C2341T p.L781L . . . PRSS2 5645 broad.mit.edu 36 7 142178812 142178812 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002770 exon1 c.T29C p.V10A . . . TRPV6 55503 broad.mit.edu 36 7 142293347 142293347 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018646 exon1 c.C37A p.L13I . . . TRPV5 56302 broad.mit.edu 36 7 142315923 142315923 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019841 exon15 c.G2069T p.R690L . . . TRPV5 56302 broad.mit.edu 36 7 142321976 142321976 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019841 exon12 c.G1475A p.R492H . . . TRPV5 56302 broad.mit.edu 36 7 142335364 142335364 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C C C C Unknown Wildtype None Phase_I Capture Illumina Illumina HiSeq NM_019841 exon7 c.G850A p.D284N . . . C7orf34 135927 broad.mit.edu 36 7 142346952 142346952 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178829 exon1 c.A187G p.T63A . . . CASP2 835 broad.mit.edu 36 7 142699902 142699902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032982 exon4 c.G464A p.R155H . . . FAM131B 9715 broad.mit.edu 36 7 142764511 142764511 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001031690 exon6 c.A594C p.E198D . . . FAM115C 285966 broad.mit.edu 36 7 143048073 143048073 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130026 exon2 c.G496A p.D166N . . . CTAGE6P 340307 broad.mit.edu 36 7 143084591 143084591 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178561 exon1 c.C1094A p.S365Y . . . OR6B1 135946 broad.mit.edu 36 7 143332379 143332379 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005281 exon1 c.C357A p.A119A . . . DGKB 1607 broad.mit.edu 36 7 14344749 14344749 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004080 exon22 c.C2041T p.R681X . . . CNTNAP2 26047 broad.mit.edu 36 7 147737489 147737489 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014141 exon23 c.C3789A p.I1263I . . . CUL1 8454 broad.mit.edu 36 7 148118442 148118442 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003592 exon16 c.C1782A p.C594X . . . CUL1 8454 broad.mit.edu 36 7 148126031 148126031 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003592 exon19 c.C2017A p.L673I . . . EZH2 2146 broad.mit.edu 36 7 148156883 148156883 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152998 exon5 c.A390C p.E130D . . . PDIA4 9601 broad.mit.edu 36 7 148331927 148331927 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004911 exon10 c.C1830T p.D610D . . . ZNF425 155054 broad.mit.edu 36 7 148432561 148432561 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001661 exon4 c.G1335A p.P445P . . . LRRC61 65999 broad.mit.edu 36 7 149665187 149665187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023942 exon2 c.C304T p.L102F . . . GIMAP7 168537 broad.mit.edu 36 7 149848686 149848686 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153236 exon2 c.G691T p.E231X . . . GIMAP6 474344 broad.mit.edu 36 7 149955899 149955899 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024711 exon3 c.G720T p.Q240H . . . GIMAP6 474344 broad.mit.edu 36 7 149956028 149956028 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024711 exon3 c.C591T p.C197C . . . GIMAP6 474344 broad.mit.edu 36 7 149956371 149956371 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024711 exon3 c.G248T p.S83I . . . GIMAP1 170575 broad.mit.edu 36 7 150048475 150048475 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130759 exon3 c.C450A p.V150V . . . TMEM176B 28959 broad.mit.edu 36 7 150120108 150120108 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014020 exon6 c.G689A p.R230Q . . . ABCB8 11194 broad.mit.edu 36 7 150373274 150373274 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007188 exon16 c.G2062A p.E688K . . . ACCN3 9311 broad.mit.edu 36 7 150379914 150379914 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020321 exon7 c.G1299A p.E433E . . . SMARCD3 6604 broad.mit.edu 36 7 150570575 150570575 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003078 exon6 c.G465A p.A155A . . . PRKAG2 51422 broad.mit.edu 36 7 151003550 151003550 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016203 exon4 c.C573A p.I191I . . . PRKAG2 51422 broad.mit.edu 36 7 151109291 151109291 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016203 exon3 c.C346T p.R116C . . . GALNTL5 168391 broad.mit.edu 36 7 151347718 151347718 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145292 exon9 c.C1231T p.R411C . . . GALNT11 63917 broad.mit.edu 36 7 151422447 151422447 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022087 exon2 c.G202A p.E68K . . . MLL3 58508 broad.mit.edu 36 7 151477024 151477024 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_170606 exon52 c.C12921T p.I4307I . . . TMEM195 392636 broad.mit.edu 36 7 15393567 15393567 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004320 exon9 c.G946T p.E316X . . . TMEM195 392636 broad.mit.edu 36 7 15424739 15424739 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004320 exon5 c.A578C p.N193T . . . DPP6 1804 broad.mit.edu 36 7 154310369 154310369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039350 exon23 c.G2104A p.A702T . . . RBM33 155435 broad.mit.edu 36 7 155227330 155227330 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053043 exon13 c.G2106A p.A702A . . . RNF32 140545 broad.mit.edu 36 7 156161242 156161242 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184996 exon8 c.G776A p.R259Q . . . MEOX2 4223 broad.mit.edu 36 7 15618708 15618708 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005924 exon3 c.A744G p.G248G . . . LMBR1 64327 broad.mit.edu 36 7 156210976 156210976 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022458 exon14 c.C1072A p.L358I . . . UBE3C 9690 broad.mit.edu 36 7 156693286 156693286 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014671 exon13 c.C1705T p.R569X . . . UBE3C 9690 broad.mit.edu 36 7 156716680 156716680 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014671 exon18 c.G2379T p.K793N . . . PTPRN2 5799 broad.mit.edu 36 7 157652738 157652738 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_130843 exon6 c.G556T p.D186Y . . . NCAPG2 54892 broad.mit.edu 36 7 158161017 158161017 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017760 exon12 c.G1239A p.P413P . . . ISPD 729920 broad.mit.edu 36 7 16284302 16284302 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101417 exon5 c.G760T p.E254X . . . ANKMY2 57037 broad.mit.edu 36 7 16615842 16615842 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020319 exon7 c.T820G p.F274V . . . AHR 196 broad.mit.edu 36 7 17316238 17316238 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001621 exon2 c.C219T p.S73S . . . AHR 196 broad.mit.edu 36 7 17345479 17345479 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001621 exon10 c.C1505T p.P502L . . . SNX13 23161 broad.mit.edu 36 7 17856543 17856543 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015132 exon11 c.C1017T p.F339F . . . SNX13 23161 broad.mit.edu 36 7 17881631 17881631 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015132 exon7 c.G661T p.E221X . . . PRPS1L1 221823 broad.mit.edu 36 7 18033001 18033001 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_175886 exon1 c.C930A p.S310S . . . HDAC9 9734 broad.mit.edu 36 7 18591625 18591625 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178425 exon2 c.G219T p.E73D . . . HDAC9 9734 broad.mit.edu 36 7 18635581 18635581 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178425 exon6 c.G748T p.D250Y . . . HDAC9 9734 broad.mit.edu 36 7 18768374 18768374 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178425 exon14 c.T2113C p.Y705H . . . FERD3L 222894 broad.mit.edu 36 7 19151460 19151460 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152898 exon1 c.C51T p.V17V . . . TMEM196 256130 broad.mit.edu 36 7 19728244 19728244 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152774 exon4 c.G498T p.L166L . . . MACC1 346389 broad.mit.edu 36 7 20164438 20164438 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182762 exon5 c.G2071A p.E691K . . . MACC1 346389 broad.mit.edu 36 7 20165135 20165135 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182762 exon5 c.G1374T p.K458N . . . ABCB5 340273 broad.mit.edu 36 7 20654195 20654195 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163941 exon11 c.C1175A p.S392Y . . . ABCB5 340273 broad.mit.edu 36 7 20710946 20710946 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178559 exon11 c.A1077C p.Q359H . . . SP4 6671 broad.mit.edu 36 7 21517366 21517366 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003112 exon6 c.C2309T p.S770L . . . DNAH11 8701 broad.mit.edu 36 7 21578051 21578051 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon8 c.G1528T p.E510X . . . DNAH11 8701 broad.mit.edu 36 7 21607029 21607029 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon16 c.G3211T p.E1071X . . . DNAH11 8701 broad.mit.edu 36 7 21607548 21607548 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon18 c.G3435T p.E1145D . . . DNAH11 8701 broad.mit.edu 36 7 21870778 21870778 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon70 c.C11496T p.F3832F . . . DNAH11 8701 broad.mit.edu 36 7 21879492 21879492 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon74 c.G12065T p.R4022I . . . DNAH11 8701 broad.mit.edu 36 7 21907319 21907319 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003777 exon82 c.C13495A p.L4499M . . . CDCA7L 55536 broad.mit.edu 36 7 21914416 21914416 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127370 exon5 c.C436A p.L146I . . . FAM126A 84668 broad.mit.edu 36 7 22990163 22990163 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032581 exon3 c.T78G p.N26K . . . NUPL2 11097 broad.mit.edu 36 7 23206764 23206764 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007342 exon7 c.G1147T p.D383Y . . . GPNMB 10457 broad.mit.edu 36 7 23272731 23272731 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002510 exon7 c.C1089T p.G363G . . . C7orf30 115416 broad.mit.edu 36 7 23307136 23307136 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138446 exon2 c.C410T p.A137V . . . IGF2BP3 10643 broad.mit.edu 36 7 23353843 23353843 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006547 exon7 c.C719A p.A240D . . . CCDC126 90693 broad.mit.edu 36 7 23649234 23649234 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138771 exon4 c.C398T p.T133M . . . MPP6 51678 broad.mit.edu 36 7 24655869 24655869 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016447 exon5 c.T384G p.I128M . . . DFNA5 1687 broad.mit.edu 36 7 24750810 24750810 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127453 exon3 c.G300A p.K100K . . . OSBPL3 26031 broad.mit.edu 36 7 24848538 24848538 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145321 exon12 c.A1178G p.N393S . . . IQCE 23288 broad.mit.edu 36 7 2604631 2604631 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152558 exon17 c.G1447T p.E483X . . . NFE2L3 9603 broad.mit.edu 36 7 26191618 26191618 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004289 exon4 c.C1775T p.A592V . . . HNRNPA2B1 3181 broad.mit.edu 36 7 26203575 26203575 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031243 exon4 c.G185T p.R62I . . . TTYH3 80727 broad.mit.edu 36 7 2658385 2658385 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025250 exon8 c.G910A p.A304T . . . HOXA6 3203 broad.mit.edu 36 7 27151956 27151956 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024014 exon2 c.G548A p.R183H . . . GNA12 2768 broad.mit.edu 36 7 2737656 2737656 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007353 exon4 c.C831T p.F277F . . . TAX1BP1 8887 broad.mit.edu 36 7 27772068 27772068 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001079864 exon4 c.A356G p.Q119R . . . CPVL 54504 broad.mit.edu 36 7 29098816 29098816 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019029 exon6 c.G490T p.D164Y . . . C7orf41 222166 broad.mit.edu 36 7 30152430 30152430 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152793 exon2 c.C275A p.S92Y . . . GARS 2617 broad.mit.edu 36 7 30623295 30623295 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002047 exon10 c.G1235A p.R412H . . . FAM188B 84182 broad.mit.edu 36 7 30784651 30784651 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032222 exon2 c.C142T p.R48X . . . PDE1C 5137 broad.mit.edu 36 7 31884116 31884116 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001191056 exon5 c.G484T p.A162S . . . FKBP9 11328 broad.mit.edu 36 7 32986581 32986581 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007270 exon5 c.A784G p.I262V . . . FKBP9 11328 broad.mit.edu 36 7 33002428 33002428 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007270 exon7 c.G1168T p.D390Y . . . BBS9 27241 broad.mit.edu 36 7 33364001 33364001 + Missense_Mutation SNP G A A rs34218557 byCluster;byFrequency TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001033605 exon15 c.G1547A p.R516Q . . . NPSR1 387129 broad.mit.edu 36 7 34833567 34833567 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207172 exon5 c.G508A p.A170T . . . DPY19L1 23333 broad.mit.edu 36 7 34964128 34964128 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015283 exon11 c.T953G p.I318S . . . HERPUD2 64224 broad.mit.edu 36 7 35700323 35700323 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022373 exon2 c.A143C p.K48T . . . ELMO1 9844 broad.mit.edu 36 7 37228784 37228784 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014800 exon10 c.T741G p.I247M . . . ELMO1 9844 broad.mit.edu 36 7 37320982 37320982 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014800 exon4 c.A189T p.E63D . . . TXNDC3 51314 broad.mit.edu 36 7 37868196 37868196 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016616 exon7 c.G312A p.P104P . . . TXNDC3 51314 broad.mit.edu 36 7 37869589 37869589 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016616 exon8 c.C454T p.Q152X . . . SFRP4 6424 broad.mit.edu 36 7 37915767 37915767 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003014 exon5 c.G832T p.D278Y . . . STARD3NL 83930 broad.mit.edu 36 7 38221186 38221186 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032016 exon4 c.A336G p.I112M . . . AMPH 273 broad.mit.edu 36 7 38481520 38481520 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001635 exon7 c.G526A p.A176T . . . VPS41 27072 broad.mit.edu 36 7 38777346 38777346 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014396 exon14 c.A1162T p.N388Y . . . C7orf10 79783 broad.mit.edu 36 7 40455463 40455463 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193312 exon9 c.A746T p.Q249L . . . INHBA 3624 broad.mit.edu 36 7 41696137 41696137 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002192 exon3 c.G917A p.R306H . . . INHBA 3624 broad.mit.edu 36 7 41696264 41696264 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002192 exon3 c.G790T p.E264X . . . GLI3 2737 broad.mit.edu 36 7 41971989 41971989 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000168 exon15 c.C3207A p.I1069I . . . C7orf25 79020 broad.mit.edu 36 7 42915826 42915826 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024054 exon2 c.T1199G p.L400R . . . HECW1 23072 broad.mit.edu 36 7 43451270 43451270 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015052 exon11 c.C1974T p.S658S . . . HECW1 23072 broad.mit.edu 36 7 43514201 43514201 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015052 exon23 c.C3812T p.S1271L . . . BLVRA 644 broad.mit.edu 36 7 43794146 43794146 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000712 exon3 c.C131T p.S44L . . . NPC1L1 29881 broad.mit.edu 36 7 44545231 44545231 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101648 exon2 c.G1290T p.K430N . . . MYO1G 64005 broad.mit.edu 36 7 44981330 44981330 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033054 exon5 c.G586A p.V196M . . . RAMP3 10268 broad.mit.edu 36 7 45189522 45189522 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005856 exon3 c.G433A p.D145N . . . IGFBP1 3484 broad.mit.edu 36 7 45896819 45896819 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000596 exon2 c.T497C p.V166A . . . IGFBP1 3484 broad.mit.edu 36 7 45898066 45898066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000596 exon3 c.G530A p.R177Q . . . TNS3 64759 broad.mit.edu 36 7 47310959 47310959 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022748 exon21 c.G2818T p.E940X . . . PKD1L1 168507 broad.mit.edu 36 7 47863743 47863743 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138295 exon28 c.C4575T p.S1525S . . . PKD1L1 168507 broad.mit.edu 36 7 47921683 47921683 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138295 exon8 c.T1099C p.S367P . . . HUS1 3364 broad.mit.edu 36 7 47974021 47974021 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004507 exon7 c.A667C p.N223H . . . SUN3 256979 broad.mit.edu 36 7 48002192 48002192 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030019 exon7 c.T654C p.G218G . . . SUN3 256979 broad.mit.edu 36 7 48013397 48013397 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001030019 exon5 c.G382A p.E128K . . . ABCA13 154664 broad.mit.edu 36 7 48255668 48255668 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152701 exon10 c.C1241T p.A414V . . . ABCA13 154664 broad.mit.edu 36 7 48282254 48282254 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152701 exon15 c.A2282C p.N761T . . . ABCA13 154664 broad.mit.edu 36 7 48289363 48289363 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152701 exon16 c.G7863T p.K2621N . . . ABCA13 154664 broad.mit.edu 36 7 48420720 48420720 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152701 exon38 c.G11965A p.A3989T . . . ZPBP 11055 broad.mit.edu 36 7 50028392 50028392 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007009 exon6 c.G773T p.R258I . . . FIGNL1 63979 broad.mit.edu 36 7 50482369 50482369 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042762 exon4 c.G111T p.Q37H . . . RBAK 57786 broad.mit.edu 36 7 5071753 5071753 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021163 exon5 c.C2140A p.L714I . . . GRB10 2887 broad.mit.edu 36 7 50739013 50739013 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001549 exon2 c.G138A p.Q46Q . . . EGFR 1956 broad.mit.edu 36 7 55228018 55228018 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005228 exon22 c.C2691A p.V897V EGFR,lung,NS,Substitution - Missense,+2 . . CCT6A 908 broad.mit.edu 36 7 56090938 56090938 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001009186 exon3 c.C329A p.S110Y . . . ZNF479 90827 broad.mit.edu 36 7 57191930 57191930 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033273 exon5 c.G1134A p.E378E . . . ZNF479 90827 broad.mit.edu 36 7 57192093 57192093 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033273 exon5 c.C971A p.P324H . . . ZNF479 90827 broad.mit.edu 36 7 57192198 57192198 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033273 exon5 c.G866T p.R289I . . . RNF216 54476 broad.mit.edu 36 7 5747543 5747543 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207116 exon4 c.A460C p.N154H . . . PMS2 5395 broad.mit.edu 36 7 5983844 5983844 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000535 exon14 c.C2346T p.D782D . . . PMS2 5395 broad.mit.edu 36 7 6001693 6001693 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000535 exon8 c.A901C p.K301Q . . . EIF2AK1 27102 broad.mit.edu 36 7 6043651 6043651 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134335 exon11 c.A1259C p.K420T . . . USP42 84132 broad.mit.edu 36 7 6142072 6142072 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032172 exon4 c.G517A p.V173I . . . ZNF680 340252 broad.mit.edu 36 7 63619461 63619461 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178558 exon4 c.A1106C p.K369T . . . ZNF680 340252 broad.mit.edu 36 7 63619526 63619526 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178558 exon4 c.G1041T p.E347D . . . ZNF107 51427 broad.mit.edu 36 7 63804488 63804488 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016220 exon7 c.G371T p.R124I . . . ZNF138 7697 broad.mit.edu 36 7 63929788 63929788 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006524 exon3 c.C655T p.R219C . . . ZNF117 51351 broad.mit.edu 36 7 64076074 64076074 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015852 exon4 c.G1310T p.R437I . . . ZNF117 51351 broad.mit.edu 36 7 64076998 64076998 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015852 exon4 c.G386T p.R129I . . . ZNF117 51351 broad.mit.edu 36 7 64089102 64089102 + 5'Flank SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001007253 exon2 c.G1738A p.E580K . . . ZNF117 51351 broad.mit.edu 36 7 64089411 64089411 + 5'Flank SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001007253 exon2 c.G1429T p.D477Y . . . KDELR2 11014 broad.mit.edu 36 7 6475890 6475890 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100603 exon3 c.C213A p.S71S . . . AUTS2 26053 broad.mit.edu 36 7 69865985 69865985 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015570 exon7 c.G936A p.E312E . . . WBSCR17 64409 broad.mit.edu 36 7 70780135 70780135 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022479 exon9 c.C1408T p.R470C . . . CALN1 83698 broad.mit.edu 36 7 70913342 70913342 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017440 exon5 c.G447A p.T149T . . . CALN1 83698 broad.mit.edu 36 7 71126581 71126581 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017440 exon4 c.G372T p.W124C . . . FKBP6 8468 broad.mit.edu 36 7 72382112 72382112 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135211 exon4 c.C274T p.L92L . . . DNAJC30 84277 broad.mit.edu 36 7 72735108 72735108 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032317 exon1 c.G582T p.E194D . . . ELN 2006 broad.mit.edu 36 7 73100821 73100821 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081753 exon15 c.C813T p.F271F . . . HIP1 3092 broad.mit.edu 36 7 75012390 75012390 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005338 exon26 c.G2592T p.K864N . . . COL28A1 340267 broad.mit.edu 36 7 7537766 7537766 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001037763 exon3 c.C419A p.A140D . . . ZP3 7784 broad.mit.edu 36 7 75892476 75892476 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007155 exon2 c.G106T p.E36X . . . MIOS 54468 broad.mit.edu 36 7 7602433 7602433 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019005 exon11 c.C2217A p.F739L . . . CCDC146 57639 broad.mit.edu 36 7 76723684 76723684 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020879 exon6 c.T606G p.D202E . . . PION 54103 broad.mit.edu 36 7 76829888 76829888 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017439 exon13 c.G897A p.P299P . . . PTPN12 5782 broad.mit.edu 36 7 77050862 77050862 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002835 exon4 c.G340T p.V114L . . . GNAT3 346562 broad.mit.edu 36 7 79925940 79925940 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001102386 exon8 c.G1048T p.D350Y . . . HGF 3082 broad.mit.edu 36 7 81173603 81173603 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000601 exon15 c.C1693T p.L565F . . . HGF 3082 broad.mit.edu 36 7 81177483 81177483 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000601 exon13 c.C1457A p.S486Y . . . HGF 3082 broad.mit.edu 36 7 81184489 81184489 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000601 exon11 c.C1400A p.S467Y . . . ICA1 3382 broad.mit.edu 36 7 8120096 8120096 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004968 exon14 c.C1434T p.H478H . . . HGF 3082 broad.mit.edu 36 7 81224526 81224526 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010934 exon4 c.G397T p.G133X . . . CACNA2D1 781 broad.mit.edu 36 7 81429199 81429199 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000722 exon36 c.C2913T p.F971F . . . PCLO 27445 broad.mit.edu 36 7 82417499 82417499 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon6 c.G10341T p.T3447T . . . PCLO 27445 broad.mit.edu 36 7 82420262 82420262 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon5 c.T7943G p.F2648C . . . PCLO 27445 broad.mit.edu 36 7 82422346 82422346 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon5 c.G5859T p.E1953D . . . PCLO 27445 broad.mit.edu 36 7 82424139 82424139 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon5 c.A4066G p.S1356G . . . PCLO 27445 broad.mit.edu 36 7 82623133 82623133 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033026 exon2 c.A760C p.T254P . . . SEMA3E 9723 broad.mit.edu 36 7 82936510 82936510 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012431 exon3 c.G321T p.M107I . . . SEMA3A 10371 broad.mit.edu 36 7 83478317 83478317 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006080 exon9 c.G952T p.D318Y . . . SEMA3A 10371 broad.mit.edu 36 7 83602075 83602075 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006080 exon2 c.G241A p.D81N . . . SEMA3D 223117 broad.mit.edu 36 7 84482463 84482463 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152754 exon14 c.A1551T p.Q517H . . . SEMA3D 223117 broad.mit.edu 36 7 84565107 84565107 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152754 exon2 c.G262T p.D88Y . . . KIAA1324L 222223 broad.mit.edu 36 7 86377217 86377217 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152748 exon15 c.G1705T p.D569Y . . . KIAA1324L 222223 broad.mit.edu 36 7 86380427 86380427 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152748 exon13 c.G1260T p.K420N . . . C7orf23 79161 broad.mit.edu 36 7 86665248 86665248 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024315 exon3 c.T179C p.L60S . . . ABCB4 5244 broad.mit.edu 36 7 86869460 86869460 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018849 exon28 c.T3749C p.V1250A . . . ABCB1 5243 broad.mit.edu 36 7 87017998 87017998 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000927 exon11 c.A1092C p.E364D . . . SLC25A40 55972 broad.mit.edu 36 7 87317177 87317177 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018843 exon6 c.G287A p.R96Q . . . NXPH1 30010 broad.mit.edu 36 7 8757278 8757278 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152745 exon3 c.G170A p.R57Q . . . NXPH1 30010 broad.mit.edu 36 7 8757670 8757670 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152745 exon3 c.G562T p.D188Y . . . MGC26647 219557 broad.mit.edu 36 7 88261482 88261482 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152706 exon2 c.A711G p.I237M . . . ZNF804B 219578 broad.mit.edu 36 7 88800795 88800795 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181646 exon4 c.G563T p.R188L . . . ZNF804B 219578 broad.mit.edu 36 7 88801078 88801078 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181646 exon4 c.T846G p.N282K . . . ZNF804B 219578 broad.mit.edu 36 7 88804254 88804254 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181646 exon4 c.C4022T p.A1341V . . . STEAP1 26872 broad.mit.edu 36 7 89631812 89631812 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012449 exon5 c.T848G p.F283C . . . C7orf63 79846 broad.mit.edu 36 7 89722700 89722700 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039706 exon2 c.C148T p.R50C . . . C7orf63 79846 broad.mit.edu 36 7 89738779 89738779 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039706 exon7 c.A536G p.Y179C . . . CLDN12 9069 broad.mit.edu 36 7 89880482 89880482 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185072 exon4 c.T556C p.F186L . . . FZD1 8321 broad.mit.edu 36 7 90733601 90733601 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003505 exon1 c.C1470T p.F490F . . . MTERF 7978 broad.mit.edu 36 7 91340959 91340959 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006980 exon3 c.G1085A p.R362Q . . . AKAP9 10142 broad.mit.edu 36 7 91469363 91469363 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon8 c.A2196G p.R732R . . . AKAP9 10142 broad.mit.edu 36 7 91506000 91506000 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon17 c.A4670C p.K1557T . . . AKAP9 10142 broad.mit.edu 36 7 91512346 91512346 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon21 c.C5251T p.R1751C . . . AKAP9 10142 broad.mit.edu 36 7 91549802 91549802 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon32 c.G8026T p.E2676X . . . AKAP9 10142 broad.mit.edu 36 7 91553555 91553555 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147185 exon37 c.C9078A p.F3026L . . . C7orf64 84060 broad.mit.edu 36 7 91996813 91996813 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032120 exon2 c.G199A p.A67T . . . FAM133B 257415 broad.mit.edu 36 7 92045572 92045572 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152789 exon4 c.A273G p.R91R . . . SAMD9 54809 broad.mit.edu 36 7 92569392 92569392 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193307 exon2 c.C3955A p.L1319I . . . SAMD9 54809 broad.mit.edu 36 7 92571360 92571360 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193307 exon2 c.A1987G p.T663A . . . SAMD9 54809 broad.mit.edu 36 7 92571479 92571479 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001193307 exon2 c.C1868A p.S623Y . . . SAMD9L 219285 broad.mit.edu 36 7 92598651 92598651 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152703 exon5 c.C4570T p.R1524C . . . SAMD9L 219285 broad.mit.edu 36 7 92601579 92601579 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152703 exon5 c.C1642A p.L548I . . . SAMD9L 219285 broad.mit.edu 36 7 92602206 92602206 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152703 exon5 c.C1015A p.L339I . . . SAMD9L 219285 broad.mit.edu 36 7 92602815 92602815 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152703 exon5 c.C406T p.L136F . . . CCDC132 55610 broad.mit.edu 36 7 92764480 92764480 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017667 exon16 c.G1350T p.K450N . . . CCDC132 55610 broad.mit.edu 36 7 92816051 92816051 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017667 exon24 c.C2300A p.S767Y . . . CALCR 799 broad.mit.edu 36 7 92910963 92910963 + Missense_Mutation SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164737 exon11 c.G793C p.A265P . . . CASD1 64921 broad.mit.edu 36 7 94012845 94012845 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022900 exon12 c.G1529A p.R510Q . . . SGCE 8910 broad.mit.edu 36 7 94095550 94095550 + Missense_Mutation SNP C T T rs11548285 byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099400 exon3 c.G290A p.R97Q . . . PEG10 23089 broad.mit.edu 36 7 94131473 94131473 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015068 exon2 c.C669T p.V223V . . . PPP1R9A 55607 broad.mit.edu 36 7 94377671 94377671 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166163 exon1 c.G310T p.E104X . . . PPP1R9A 55607 broad.mit.edu 36 7 94378505 94378505 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166163 exon1 c.G1144T p.E382X . . . PPP1R9A 55607 broad.mit.edu 36 7 94736618 94736618 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166160 exon14 c.C2987A p.P996Q . . . PON1 5444 broad.mit.edu 36 7 94775317 94775317 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000446 exon6 c.C640T p.R214X . . . PON1 5444 broad.mit.edu 36 7 94782593 94782593 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000446 exon4 c.G347T p.G116V . . . ASB4 51666 broad.mit.edu 36 7 95003787 95003787 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016116 exon4 c.G1081T p.D361Y . . . DYNC1I1 1780 broad.mit.edu 36 7 95506546 95506546 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135557 exon13 c.C1326A p.V442V . . . SLC25A13 10165 broad.mit.edu 36 7 95651600 95651600 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014251 exon11 c.G1102T p.E368X . . . DLX5 1749 broad.mit.edu 36 7 96488308 96488308 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005221 exon3 c.A546C p.K182N . . . ACN9 57001 broad.mit.edu 36 7 96648293 96648293 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020186 exon2 c.G208A p.E70K . . . LMTK2 22853 broad.mit.edu 36 7 97608657 97608657 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014916 exon3 c.A244G p.N82D . . . LMTK2 22853 broad.mit.edu 36 7 97659674 97659674 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014916 exon11 c.T1961G p.L654X . . . BAIAP2L1 55971 broad.mit.edu 36 7 97777721 97777721 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018842 exon9 c.G927A p.P309P . . . TMEM130 222865 broad.mit.edu 36 7 98295772 98295772 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134450 exon3 c.G517A p.A173T . . . TMEM130 222865 broad.mit.edu 36 7 98298724 98298724 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001134450 exon2 c.C321A p.V107V . . . TRRAP 8295 broad.mit.edu 36 7 98424433 98424433 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003496 exon61 c.C9424T p.R3142W . . . ARPC1A 10552 broad.mit.edu 36 7 98768920 98768920 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006409 exon2 c.T8C p.L3P . . . ZNF655 79027 broad.mit.edu 36 7 99008397 99008397 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083956 exon4 c.G835T p.E279X . . . CYP3A5 1577 broad.mit.edu 36 7 99099586 99099586 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000777 exon8 c.A739C p.N247H . . . CYP3A7 1551 broad.mit.edu 36 7 99155901 99155901 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000765 exon4 c.G289T p.E97X . . . CYP3A7 1551 broad.mit.edu 36 7 99157886 99157886 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000765 exon3 c.G187T p.E63X . . . COPS6 10980 broad.mit.edu 36 7 99525284 99525284 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006833 exon3 c.T313C p.Y105H . . . GPC2 221914 broad.mit.edu 36 7 99609520 99609520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152742 exon5 c.C766T p.R256C . . . STAG3 10734 broad.mit.edu 36 7 99640935 99640935 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012447 exon29 c.G3230A p.R1077H . . . ZCWPW1 55063 broad.mit.edu 36 7 99836702 99836702 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017984 exon18 c.C1818T p.D606D . . . LRCH4 4034 broad.mit.edu 36 7 100013479 100013479 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 100396783 100396783 + IGR SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ATXN7L1 222255 broad.mit.edu 36 7 105304241 105304241 + 5'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PRKAR2B 5577 broad.mit.edu 36 7 106578711 106578711 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . BCAP29 55973 broad.mit.edu 36 7 107049486 107049486 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC26A4 5172 broad.mit.edu 36 7 107111127 107111127 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DOCK4 9732 broad.mit.edu 36 7 111236694 111236694 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TES 26136 broad.mit.edu 36 7 115645059 115645059 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 120868235 120868235 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PTPRZ1 5803 broad.mit.edu 36 7 121431960 121431960 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . POT1 25913 broad.mit.edu 36 7 124324465 124324465 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SND1 27044 broad.mit.edu 36 7 127509173 127509173 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UBE2H 7328 broad.mit.edu 36 7 129266276 129266276 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CPA2 1358 broad.mit.edu 36 7 129709271 129709271 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COPG2 26958 broad.mit.edu 36 7 129933889 129933889 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PLXNA4 91584 broad.mit.edu 36 7 131468343 131468343 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CHCHD3 54927 broad.mit.edu 36 7 132359935 132359935 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NUP205 23165 broad.mit.edu 36 7 134958225 134958225 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ATP6V0A4 50617 broad.mit.edu 36 7 138044902 138044902 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ATP6V0A4 50617 broad.mit.edu 36 7 138069412 138069412 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . UBN2 254048 broad.mit.edu 36 7 138587347 138587347 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141709120 141709120 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141760773 141760773 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141943529 141943529 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141949296 141949296 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141952432 141952432 + IGR SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 141969917 141969917 + IGR SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 142044281 142044281 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 142103051 142103051 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CLCN1 1180 broad.mit.edu 36 7 142754120 142754120 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . IGF2BP3 10643 broad.mit.edu 36 7 23349856 23349856 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C7orf46 340277 broad.mit.edu 36 7 23704331 23704331 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . STK31 56164 broad.mit.edu 36 7 23777275 23777275 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STK31 56164 broad.mit.edu 36 7 23794284 23794284 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CCDC129 223075 broad.mit.edu 36 7 31560996 31560996 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DPY19L1 23333 broad.mit.edu 36 7 34953760 34953760 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TBX20 57057 broad.mit.edu 36 7 35237633 35237633 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ELMO1 9844 broad.mit.edu 36 7 36900975 36900975 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TARP 445347 broad.mit.edu 36 7 38323185 38323185 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 7 38364936 38364936 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . BLVRA 644 broad.mit.edu 36 7 43777302 43777302 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . OGDH 4967 broad.mit.edu 36 7 44707656 44707656 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TNS3 64759 broad.mit.edu 36 7 47374486 47374486 + Splice_Site SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PKD1L1 168507 broad.mit.edu 36 7 47841248 47841248 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ABCA13 154664 broad.mit.edu 36 7 48208519 48208519 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ABCA13 154664 broad.mit.edu 36 7 48345557 48345557 + Intron SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ABCA13 154664 broad.mit.edu 36 7 48384566 48384566 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . LOC389458 389458 broad.mit.edu 36 7 5079083 5079083 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . POM121 9883 broad.mit.edu 36 7 72048451 72048451 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POR 5447 broad.mit.edu 36 7 75411082 75411082 + RNA SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PDK4 5166 broad.mit.edu 36 7 95054968 95054968 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TRRAP 8295 broad.mit.edu 36 7 98372703 98372703 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TRRAP 8295 broad.mit.edu 36 7 98381317 98381317 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . COL14A1 7373 broad.mit.edu 36 8 121365161 121365162 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - - A - - Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021110 exon32 c.3930_3931insA p.N1310fs . . . VPS13B 157680 broad.mit.edu 36 8 100184381 100184381 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon5 c.G437A p.R146Q . . . VPS13B 157680 broad.mit.edu 36 8 100858279 100858279 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152564 exon41 c.T7348G p.F2450V . . . RGS22 26166 broad.mit.edu 36 8 101085434 101085434 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015668 exon17 c.G2523T p.W841C . . . RGS22 26166 broad.mit.edu 36 8 101134209 101134209 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015668 exon10 c.C1686T p.I562I . . . FBXO43 286151 broad.mit.edu 36 8 101223556 101223556 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001029860 exon2 c.G102T p.K34N . . . SPAG1 6674 broad.mit.edu 36 8 101306686 101306686 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003114 exon14 c.G1798T p.E600X . . . SNX31 169166 broad.mit.edu 36 8 101693464 101693464 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152628 exon7 c.T551C p.L184P . . . SNX31 169166 broad.mit.edu 36 8 101694426 101694426 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152628 exon6 c.C496T p.R166W . . . PABPC1 26986 broad.mit.edu 36 8 101791073 101791073 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002568 exon8 c.A1035C p.E345D . . . UBR5 51366 broad.mit.edu 36 8 103441536 103441536 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015902 exon5 c.G325A p.D109N . . . FZD6 8323 broad.mit.edu 36 8 104411403 104411403 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164616 exon7 c.C1790T p.S597F . . . CTHRC1 115908 broad.mit.edu 36 8 104459635 104459635 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138455 exon3 c.C577T p.R193C . . . DCAF13 25879 broad.mit.edu 36 8 104522889 104522889 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015420 exon10 c.T1573C p.Y525H . . . RIMS2 9699 broad.mit.edu 36 8 104847673 104847673 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100117 exon3 c.C430A p.L144I . . . RIMS2 9699 broad.mit.edu 36 8 105042476 105042476 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001100117 exon15 c.G2709T p.K903N . . . TM7SF4 81501 broad.mit.edu 36 8 105430290 105430290 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030788 exon2 c.G334T p.E112X . . . TM7SF4 81501 broad.mit.edu 36 8 105437536 105437536 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030788 exon4 c.C1347A p.F449L . . . SOX7 83595 broad.mit.edu 36 8 10621532 10621532 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031439 exon2 c.C293T p.A98V . . . PINX1 54984 broad.mit.edu 36 8 10660374 10660374 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017884 exon7 c.G934A p.A312T . . . ZFPM2 23414 broad.mit.edu 36 8 106882821 106882821 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012082 exon8 c.T1335G p.T445T . . . ZFPM2 23414 broad.mit.edu 36 8 106884174 106884174 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012082 exon8 c.G2688A p.P896P . . . ZFPM2 23414 broad.mit.edu 36 8 106884239 106884239 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012082 exon8 c.A2753T p.K918I . . . XKR6 286046 broad.mit.edu 36 8 10793334 10793334 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173683 exon3 c.C1464T p.I488I . . . XKR6 286046 broad.mit.edu 36 8 10793634 10793634 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173683 exon3 c.C1164A p.I388I . . . RSPO2 340419 broad.mit.edu 36 8 109070533 109070533 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178565 exon3 c.G210T p.Q70H . . . TTC35 9694 broad.mit.edu 36 8 109558230 109558230 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014673 exon9 c.G635T p.R212I . . . TTC35 9694 broad.mit.edu 36 8 109567964 109567964 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014673 exon11 c.C855T p.V285V . . . PKHD1L1 93035 broad.mit.edu 36 8 110516635 110516635 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177531 exon29 c.A3381G p.G1127G . . . PKHD1L1 93035 broad.mit.edu 36 8 110525116 110525116 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177531 exon37 c.G4600C p.A1534P . . . PKHD1L1 93035 broad.mit.edu 36 8 110526547 110526547 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_177531 exon38 c.C5273A p.S1758Y . . . PKHD1L1 93035 broad.mit.edu 36 8 110599787 110599787 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_177531 exon73 c.C11905T p.P3969S . . . FAM167A 83648 broad.mit.edu 36 8 11319481 11319481 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053279 exon3 c.A456G p.K152K . . . CSMD3 114788 broad.mit.edu 36 8 113387481 113387481 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon51 c.G8002T p.E2668X . . . CSMD3 114788 broad.mit.edu 36 8 113387580 113387580 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon51 c.C7903A p.P2635T . . . CSMD3 114788 broad.mit.edu 36 8 113395867 113395867 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon48 c.G7516A p.E2506K . . . CSMD3 114788 broad.mit.edu 36 8 113766911 113766911 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon15 c.T2382G p.A794A . . . CSMD3 114788 broad.mit.edu 36 8 114057302 114057302 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon7 c.A1282C p.R428R . . . CSMD3 114788 broad.mit.edu 36 8 114255254 114255254 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198123 exon4 c.C582T p.F194F . . . TRPS1 7227 broad.mit.edu 36 8 116686287 116686287 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon4 c.G1084A p.E362K . . . TRPS1 7227 broad.mit.edu 36 8 116700610 116700610 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon3 c.G890A p.R297H TRPS1,lung,NS,Substitution - Missense,0 . . TRPS1 7227 broad.mit.edu 36 8 116701338 116701338 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014112 exon3 c.G162A p.Q54Q . . . UTP23 84294 broad.mit.edu 36 8 117853029 117853029 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032334 exon3 c.G517T p.E173X . . . EXT1 2131 broad.mit.edu 36 8 118894354 118894354 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000127 exon8 c.G1660A p.D554N . . . USP17L2 377630 broad.mit.edu 36 8 12032882 12032882 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201402 exon1 c.C797T p.T266M . . . USP17L2 377630 broad.mit.edu 36 8 12033343 12033343 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201402 exon1 c.G336T p.E112D . . . NOV 4856 broad.mit.edu 36 8 120504446 120504446 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002514 exon5 c.A967G p.K323E . . . ENPP2 5168 broad.mit.edu 36 8 120672027 120672027 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130863 exon13 c.G1106T p.R369I . . . ENPP2 5168 broad.mit.edu 36 8 120677421 120677421 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006209 exon12 c.G975T p.E325D . . . TAF2 6873 broad.mit.edu 36 8 120866650 120866650 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003184 exon15 c.G1831T p.E611X . . . COL14A1 7373 broad.mit.edu 36 8 121249619 121249619 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021110 exon5 c.G388A p.V130I . . . COL14A1 7373 broad.mit.edu 36 8 121359562 121359562 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021110 exon27 c.G3245T p.R1082I . . . COL14A1 7373 broad.mit.edu 36 8 121423838 121423838 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021110 exon44 c.G4860A p.A1620A . . . ZHX2 22882 broad.mit.edu 36 8 124034805 124034805 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014943 exon3 c.C1874A p.S625Y . . . WDR67 93594 broad.mit.edu 36 8 124233274 124233274 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145088 exon20 c.C2827A p.L943I . . . ZHX1 11244 broad.mit.edu 36 8 124335185 124335185 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017926 exon3 c.G2183A p.S728N . . . ZHX1 11244 broad.mit.edu 36 8 124335966 124335966 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017926 exon3 c.C1402T p.R468W . . . ZHX1 11244 broad.mit.edu 36 8 124336920 124336920 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017926 exon3 c.G448T p.D150Y . . . ZHX1 11244 broad.mit.edu 36 8 124337162 124337162 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017926 exon3 c.G206A p.G69E . . . WDYHV1 55093 broad.mit.edu 36 8 124522757 124522757 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018024 exon6 c.G539A p.S180N . . . FBXO32 114907 broad.mit.edu 36 8 124594660 124594660 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058229 exon6 c.C610A p.L204I . . . KLHL38 340359 broad.mit.edu 36 8 124733240 124733240 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081675 exon1 c.C1108T p.L370L . . . FAM91A1 157769 broad.mit.edu 36 8 124890346 124890346 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144963 exon22 c.G2170A p.E724K . . . FER1L6 654463 broad.mit.edu 36 8 125092023 125092023 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon14 c.A1709C p.N570T . . . FER1L6 654463 broad.mit.edu 36 8 125121367 125121367 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon20 c.G2528A p.S843N . . . FER1L6 654463 broad.mit.edu 36 8 125184687 125184687 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039112 exon39 c.C5245T p.R1749C . . . TMEM65 157378 broad.mit.edu 36 8 125408789 125408789 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_194291 exon3 c.T404G p.I135S . . . TRMT12 55039 broad.mit.edu 36 8 125533559 125533559 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017956 exon1 c.G1210A p.A404T . . . RNF139 11236 broad.mit.edu 36 8 125568221 125568221 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007218 exon2 c.T1150C p.S384P . . . ZNF572 137209 broad.mit.edu 36 8 126058348 126058348 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152412 exon3 c.C657T p.P219P . . . ZNF572 137209 broad.mit.edu 36 8 126058965 126058965 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152412 exon3 c.C1274T p.S425F . . . KIAA0196 9897 broad.mit.edu 36 8 126138214 126138214 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014846 exon16 c.T1903G p.F635V . . . C8orf79 57604 broad.mit.edu 36 8 12923227 12923227 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099677 exon2 c.G290T p.R97I . . . DLC1 10395 broad.mit.edu 36 8 12987737 12987737 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon18 c.C4541T p.S1514F . . . DLC1 10395 broad.mit.edu 36 8 12992326 12992326 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon15 c.C3880T p.R1294C . . . DLC1 10395 broad.mit.edu 36 8 12993269 12993269 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon14 c.G3784T p.D1262Y . . . DLC1 10395 broad.mit.edu 36 8 13002249 13002249 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon9 c.C1968T p.H656H . . . GSDMC 56169 broad.mit.edu 36 8 130834243 130834243 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031415 exon7 c.G727A p.E243K . . . GSDMC 56169 broad.mit.edu 36 8 130857684 130857684 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031415 exon3 c.A250G p.S84G . . . FAM49B 51571 broad.mit.edu 36 8 130933667 130933667 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016623 exon11 c.C556T p.R186X . . . ASAP1 50807 broad.mit.edu 36 8 131161347 131161347 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018482 exon25 c.A2625G p.G875G . . . ASAP1 50807 broad.mit.edu 36 8 131197128 131197128 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018482 exon22 c.C2100T p.H700H . . . ADCY8 114 broad.mit.edu 36 8 132121240 132121240 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001115 exon1 c.C522A p.F174L . . . OC90 729330 broad.mit.edu 36 8 133114583 133114583 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080399 exon11 c.G744A p.E248E . . . KCNQ3 3786 broad.mit.edu 36 8 133261610 133261610 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004519 exon4 c.C753T p.G251G . . . TMEM71 137835 broad.mit.edu 36 8 133809283 133809283 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144649 exon6 c.C562T p.L188F . . . PHF20L1 51105 broad.mit.edu 36 8 133876006 133876006 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032205 exon3 c.C252A p.F84L . . . PHF20L1 51105 broad.mit.edu 36 8 133923952 133923952 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016018 exon19 c.C2398A p.H800N . . . TG 7038 broad.mit.edu 36 8 133968780 133968780 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon9 c.G1981T p.D661Y . . . TG 7038 broad.mit.edu 36 8 134000920 134000920 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003235 exon21 c.C4496A p.T1499N . . . DLC1 10395 broad.mit.edu 36 8 13401286 13401286 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon2 c.G666T p.E222D . . . DLC1 10395 broad.mit.edu 36 8 13401435 13401435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182643 exon2 c.G517T p.A173S . . . SLA 6503 broad.mit.edu 36 8 134120036 134120036 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001045556 exon9 c.G746A p.R249Q . . . WISP1 8840 broad.mit.edu 36 8 134302265 134302265 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003882 exon3 c.C609T p.F203F . . . ZFAT 57623 broad.mit.edu 36 8 135719088 135719088 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001174157 exon3 c.G246T p.K82N . . . COL22A1 169044 broad.mit.edu 36 8 139675573 139675573 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152888 exon63 c.C4484A p.S1495Y . . . COL22A1 169044 broad.mit.edu 36 8 139695319 139695319 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152888 exon56 c.G3951T p.Q1317H . . . COL22A1 169044 broad.mit.edu 36 8 139728104 139728104 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152888 exon47 c.G3451T p.E1151X . . . SGCZ 137868 broad.mit.edu 36 8 14139510 14139510 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_139167 exon4 c.G386T p.R129I . . . TRAPPC9 83696 broad.mit.edu 36 8 141484874 141484874 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031466 exon6 c.T1286G p.I429S . . . PTK2 5747 broad.mit.edu 36 8 141958912 141958912 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153831 exon4 c.A202G p.I68V . . . DENND3 22898 broad.mit.edu 36 8 142247321 142247321 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014957 exon13 c.A1550C p.K517T . . . SLC45A4 57210 broad.mit.edu 36 8 142290877 142290877 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080431 exon8 c.C2243A p.S748Y . . . CYP11B2 1585 broad.mit.edu 36 8 143996234 143996234 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000498 exon1 c.G25A p.V9M . . . TOP1MT 116447 broad.mit.edu 36 8 144479038 144479038 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052963 exon5 c.G524T p.G175V . . . GPAA1 8733 broad.mit.edu 36 8 145210850 145210850 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003801 exon5 c.G535T p.D179Y . . . ZNF251 90987 broad.mit.edu 36 8 145917862 145917862 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138367 exon5 c.G1992T p.K664N . . . ZNF7 7553 broad.mit.edu 36 8 146038357 146038357 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003416 exon5 c.G1061T p.R354I . . . TUSC3 7991 broad.mit.edu 36 8 15525066 15525066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006765 exon2 c.G245A p.R82Q . . . TUSC3 7991 broad.mit.edu 36 8 15564069 15564069 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006765 exon5 c.A601G p.T201A . . . TUSC3 7991 broad.mit.edu 36 8 15632560 15632560 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006765 exon7 c.G813A p.G271G . . . MSR1 4481 broad.mit.edu 36 8 16056944 16056944 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002445 exon6 c.G898T p.G300C . . . MSR1 4481 broad.mit.edu 36 8 16077080 16077080 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002445 exon3 c.T204G p.I68M . . . PDGFRL 5157 broad.mit.edu 36 8 17530402 17530402 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006207 exon5 c.T632C p.F211S . . . MTUS1 57509 broad.mit.edu 36 8 17656507 17656507 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001925 exon2 c.G1090T p.V364L . . . MTUS1 57509 broad.mit.edu 36 8 17656939 17656939 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001925 exon2 c.G658T p.E220X . . . FGL1 2267 broad.mit.edu 36 8 17770516 17770516 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147203 exon7 c.C600T p.Y200Y . . . FGL1 2267 broad.mit.edu 36 8 17783920 17783920 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_147203 exon3 c.C112T p.R38C . . . ZNF596 169270 broad.mit.edu 36 8 186079 186079 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173539 exon6 c.G1232T p.R411I . . . INTS10 55174 broad.mit.edu 36 8 19745894 19745894 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018142 exon15 c.G1747A p.D583N . . . LPL 4023 broad.mit.edu 36 8 19857648 19857648 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000237 exon6 c.G792T p.V264V . . . MYOM2 9172 broad.mit.edu 36 8 2005016 2005016 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003970 exon8 c.G786A p.P262P . . . SLC18A1 6570 broad.mit.edu 36 8 20074886 20074886 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142324 exon7 c.A665G p.D222G . . . SLC18A1 6570 broad.mit.edu 36 8 20076174 20076174 + Silent SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142324 exon6 c.A609T p.G203G . . . MYOM2 9172 broad.mit.edu 36 8 2064602 2064602 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003970 exon32 c.G3775A p.E1259K . . . PIWIL2 55124 broad.mit.edu 36 8 22229774 22229774 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135721 exon19 c.C2280T p.F760F . . . PIWIL2 55124 broad.mit.edu 36 8 22267792 22267792 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135721 exon22 c.C2721A p.V907V . . . PEBP4 157310 broad.mit.edu 36 8 22833669 22833669 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144962 exon3 c.G231A p.P77P . . . TNFRSF10B 8795 broad.mit.edu 36 8 22940736 22940736 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003842 exon7 c.G791A p.R264Q . . . TNFRSF10A 8797 broad.mit.edu 36 8 23125640 23125640 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003844 exon2 c.C337T p.L113F . . . ENTPD4 9583 broad.mit.edu 36 8 23347785 23347785 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128930 exon12 c.C1588A p.L530I . . . ADAM7 8756 broad.mit.edu 36 8 24402680 24402680 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003817 exon12 c.T1210G p.F404V . . . ADAM7 8756 broad.mit.edu 36 8 24405374 24405374 + Silent SNP C G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C G C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003817 exon14 c.C1425G p.G475G . . . ADAM7 8756 broad.mit.edu 36 8 24405456 24405456 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003817 exon14 c.A1507G p.K503E . . . NEFM 4741 broad.mit.edu 36 8 24827966 24827966 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005382 exon1 c.C755T p.S252L . . . DOCK5 80005 broad.mit.edu 36 8 25210004 25210004 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024940 exon7 c.G529A p.E177K . . . CDCA2 157313 broad.mit.edu 36 8 25375587 25375587 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152562 exon4 c.G333A p.Q111Q . . . EBF2 64641 broad.mit.edu 36 8 25801402 25801402 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022659 exon9 c.C755T p.T252I . . . ADRA1A 148 broad.mit.edu 36 8 26683898 26683898 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033304 exon2 c.G1086A p.P362P . . . ADRA1A 148 broad.mit.edu 36 8 26684055 26684055 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033304 exon2 c.T929C p.I310T . . . TRIM35 23087 broad.mit.edu 36 8 27207643 27207643 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_171982 exon3 c.G633T p.E211D . . . CHRNA2 1135 broad.mit.edu 36 8 27383266 27383266 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000742 exon3 c.C223T p.R75C . . . ESCO2 157570 broad.mit.edu 36 8 27690548 27690548 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017420 exon3 c.G804A p.E268E . . . ESCO2 157570 broad.mit.edu 36 8 27706119 27706119 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017420 exon9 c.G1369T p.E457X . . . PBK 55872 broad.mit.edu 36 8 27736570 27736570 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018492 exon4 c.G224A p.R75Q . . . PBK 55872 broad.mit.edu 36 8 27746515 27746515 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018492 exon2 c.A35G p.K12R . . . CSMD1 64478 broad.mit.edu 36 8 2796157 2796157 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon66 c.G10088T p.X3363L . . . CSMD1 64478 broad.mit.edu 36 8 2802676 2802676 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon63 c.C9764T p.S3255L . . . CSMD1 64478 broad.mit.edu 36 8 2808293 2808293 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon60 c.G9313A p.E3105K . . . CSMD1 64478 broad.mit.edu 36 8 2810830 2810830 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon59 c.G9155A p.R3052Q . . . FZD3 7976 broad.mit.edu 36 8 28434254 28434254 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145866 exon3 c.G370T p.D124Y . . . FZD3 7976 broad.mit.edu 36 8 28476328 28476328 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145866 exon7 c.C1882T p.R628W . . . CSMD1 64478 broad.mit.edu 36 8 2897487 2897487 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon50 c.C7565A p.S2522X . . . KIF13B 23303 broad.mit.edu 36 8 29043987 29043987 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon24 c.A3057G p.G1019G . . . KIF13B 23303 broad.mit.edu 36 8 29069203 29069203 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon14 c.G1494A p.T498T . . . KIF13B 23303 broad.mit.edu 36 8 29102038 29102038 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015254 exon5 c.G229T p.D77Y . . . CSMD1 64478 broad.mit.edu 36 8 2951461 2951461 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon46 c.T6946C p.X2316R . . . CSMD1 64478 broad.mit.edu 36 8 2963336 2963336 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon42 c.G6423T p.K2141N . . . TEX15 56154 broad.mit.edu 36 8 30821057 30821057 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.C5019T p.N1673N . . . TEX15 56154 broad.mit.edu 36 8 30822686 30822686 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031271 exon1 c.A3390G p.E1130E . . . WRN 7486 broad.mit.edu 36 8 31036286 31036286 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000553 exon3 c.G172A p.D58N . . . NRG1 3084 broad.mit.edu 36 8 32625283 32625283 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013959 exon1 c.T505G p.S169A . . . NRG1 3084 broad.mit.edu 36 8 32733515 32733515 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001160008 exon9 c.C847T p.R283X . . . C8orf41 80185 broad.mit.edu 36 8 33486829 33486829 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_025115 exon2 c.C811T p.L271F . . . UNC5D 137970 broad.mit.edu 36 8 35545278 35545278 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080872 exon3 c.G443T p.R148M . . . UNC5D 137970 broad.mit.edu 36 8 35683000 35683000 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080872 exon8 c.C1096A p.L366I . . . CSMD1 64478 broad.mit.edu 36 8 3598881 3598881 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon6 c.G910T p.G304X . . . GPR124 25960 broad.mit.edu 36 8 37791638 37791638 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032777 exon2 c.G333A p.E111E . . . BRF2 55290 broad.mit.edu 36 8 37823569 37823569 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018310 exon3 c.C497T p.S166F . . . WHSC1L1 54904 broad.mit.edu 36 8 38281966 38281966 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_023034 exon13 c.C2397T p.C799C . . . CSMD1 64478 broad.mit.edu 36 8 3876921 3876921 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033225 exon4 c.A524G p.Y175C . . . HTRA4 203100 broad.mit.edu 36 8 38951773 38951773 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153692 exon2 c.C533T p.A178V . . . TM2D2 83877 broad.mit.edu 36 8 38972133 38972133 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031940 exon2 c.C47T p.A16V . . . ADAM9 8754 broad.mit.edu 36 8 39018643 39018643 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003816 exon12 c.T1152C p.S384S . . . ADAM32 203102 broad.mit.edu 36 8 39210664 39210664 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145004 exon16 c.G1724A p.R575Q . . . ADAM32 203102 broad.mit.edu 36 8 39231182 39231182 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145004 exon18 c.G1995T p.E665D . . . ADAM18 8749 broad.mit.edu 36 8 39606054 39606054 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014237 exon7 c.A527C p.K176T . . . ADAM2 2515 broad.mit.edu 36 8 39797739 39797739 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001464 exon6 c.C452T p.S151F . . . ZMAT4 79698 broad.mit.edu 36 8 40674065 40674065 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024645 exon4 c.G205A p.D69N . . . ANK1 286 broad.mit.edu 36 8 41649512 41649512 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020475 exon38 c.A4613G p.D1538G . . . MYST3 7994 broad.mit.edu 36 8 41908930 41908930 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099413 exon18 c.G5965A p.A1989T . . . PLAT 5327 broad.mit.edu 36 8 42164627 42164627 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033011 exon4 c.C180T p.F60F . . . IKBKB 3551 broad.mit.edu 36 8 42295948 42295948 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190720 exon13 c.G1362T p.M454I . . . C8orf40 114926 broad.mit.edu 36 8 42520883 42520883 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001135675 exon2 c.C111T p.F37F . . . POTEA 340441 broad.mit.edu 36 8 43274874 43274874 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005365 exon4 c.A645C p.K215N . . . POTEA 340441 broad.mit.edu 36 8 43316188 43316188 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005365 exon10 c.G1197T p.K399N . . . PRKDC 5591 broad.mit.edu 36 8 48934774 48934774 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081640 exon46 c.C6157A p.H2053N . . . PRKDC 5591 broad.mit.edu 36 8 48964163 48964163 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081640 exon33 c.A4244G p.X1415W . . . MCM4 4173 broad.mit.edu 36 8 49044934 49044934 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182746 exon11 c.C1198T p.R400X . . . SNTG1 54212 broad.mit.edu 36 8 51477395 51477395 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018967 exon4 c.G100T p.D34Y . . . ST18 9705 broad.mit.edu 36 8 53225027 53225027 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014682 exon16 c.C1870A p.L624M . . . OPRK1 4986 broad.mit.edu 36 8 54304848 54304848 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000912 exon4 c.C705T p.F235F . . . SOX17 64321 broad.mit.edu 36 8 55533540 55533540 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022454 exon1 c.G289A p.E97K . . . RP1 6101 broad.mit.edu 36 8 55701217 55701217 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006269 exon4 c.A2222C p.N741T . . . RP1 6101 broad.mit.edu 36 8 55704727 55704727 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006269 exon4 c.A5732G p.Y1911C . . . TGS1 96764 broad.mit.edu 36 8 56888162 56888162 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024831 exon12 c.T2370G p.I790M . . . MOS 4342 broad.mit.edu 36 8 57188436 57188436 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005372 exon1 c.C660T p.F220F . . . PLAG1 5324 broad.mit.edu 36 8 57241702 57241702 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114635 exon3 c.C911A p.P304H . . . IMPAD1 54928 broad.mit.edu 36 8 58039069 58039069 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017813 exon5 c.C917G p.A306G . . . CYP7A1 1581 broad.mit.edu 36 8 59567536 59567536 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000780 exon5 c.G1145A p.R382Q . . . SDCBP 6386 broad.mit.edu 36 8 59655720 59655720 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007070 exon8 c.C838T p.R280W . . . TOX 9760 broad.mit.edu 36 8 59882882 59882882 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014729 exon9 c.A1559G p.D520G . . . TOX 9760 broad.mit.edu 36 8 59890782 59890782 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014729 exon7 c.C1061T p.S354L . . . CHD7 55636 broad.mit.edu 36 8 61911198 61911198 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017780 exon16 c.A3791C p.K1264T . . . ASPH 444 broad.mit.edu 36 8 62623304 62623304 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164750 exon21 c.G1557A p.E519E . . . MCPH1 79648 broad.mit.edu 36 8 6283979 6283979 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024596 exon6 c.G534T p.K178N . . . MCPH1 79648 broad.mit.edu 36 8 6290178 6290178 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024596 exon8 c.T1527G p.C509W . . . NKAIN3 286183 broad.mit.edu 36 8 63654770 63654770 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173688 exon2 c.G173A p.R58K . . . CYP7B1 9420 broad.mit.edu 36 8 65690232 65690232 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004820 exon4 c.A962G p.E321G . . . CYP7B1 9420 broad.mit.edu 36 8 65690825 65690825 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004820 exon3 c.T827C p.V276A . . . MTFR1 9650 broad.mit.edu 36 8 66782756 66782756 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145838 exon5 c.G790T p.G264X . . . PDE7A 5150 broad.mit.edu 36 8 66794083 66794083 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002603 exon13 c.C1367A p.S456X . . . DNAJC5B 85479 broad.mit.edu 36 8 67151528 67151528 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033105 exon4 c.G199A p.A67T . . . C8orf46 254778 broad.mit.edu 36 8 67584926 67584926 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152765 exon4 c.C322T p.R108X . . . MYBL1 4603 broad.mit.edu 36 8 67667280 67667280 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080416 exon8 c.G816T p.E272D . . . MYBL1 4603 broad.mit.edu 36 8 67672185 67672185 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080416 exon5 c.T446C p.I149T . . . C8orf45 157777 broad.mit.edu 36 8 67953436 67953436 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173518 exon6 c.T555G p.N185K . . . C8orf45 157777 broad.mit.edu 36 8 67958739 67958739 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173518 exon9 c.C1029T p.C343C . . . C8orf45 157777 broad.mit.edu 36 8 67976080 67976080 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173518 exon13 c.G1712A p.R571K . . . LRRC67 286187 broad.mit.edu 36 8 68092436 68092436 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013626 exon2 c.A101T p.N34I . . . CSPP1 79848 broad.mit.edu 36 8 68233330 68233330 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024790 exon18 c.G2321T p.R774L . . . ARFGEF1 10565 broad.mit.edu 36 8 68279534 68279534 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006421 exon35 c.G4894A p.D1632N . . . ARFGEF1 10565 broad.mit.edu 36 8 68342219 68342219 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006421 exon11 c.G1585T p.E529X . . . PREX2 80243 broad.mit.edu 36 8 69165444 69165444 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024870 exon20 c.G2190A p.E730E . . . PREX2 80243 broad.mit.edu 36 8 69267252 69267252 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024870 exon37 c.C4542A p.S1514S . . . C8orf34 116328 broad.mit.edu 36 8 69514408 69514408 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052958 exon2 c.G448A p.A150T . . . C8orf34 116328 broad.mit.edu 36 8 69783867 69783867 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052958 exon9 c.C1326T p.F442F . . . C8orf34 116328 broad.mit.edu 36 8 69796164 69796164 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052958 exon10 c.A1342G p.T448A . . . SLCO5A1 81796 broad.mit.edu 36 8 70830239 70830239 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146008 exon3 c.C1232T p.S411L . . . SLCO5A1 81796 broad.mit.edu 36 8 70906911 70906911 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146008 exon1 c.C552T p.F184F . . . XKR9 389668 broad.mit.edu 36 8 71808934 71808934 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001011720 exon5 c.G843T p.Q281H . . . EYA1 2138 broad.mit.edu 36 8 72319440 72319440 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_172060 exon10 c.A993G p.E331E . . . TRPA1 8989 broad.mit.edu 36 8 73108495 73108495 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon23 c.C2806A p.L936M . . . TRPA1 8989 broad.mit.edu 36 8 73121394 73121394 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007332 exon17 c.G1969A p.E657K . . . TRPA1 8989 broad.mit.edu 36 8 73121975 73121975 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon16 c.T1927G p.L643V . . . TRPA1 8989 broad.mit.edu 36 8 73130611 73130611 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon11 c.G1228A p.D410N . . . TRPA1 8989 broad.mit.edu 36 8 73137591 73137591 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon6 c.G804T p.V268V . . . TRPA1 8989 broad.mit.edu 36 8 73146606 73146606 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007332 exon2 c.G162A p.K54K . . . KCNB2 9312 broad.mit.edu 36 8 74011342 74011342 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004770 exon3 c.C1198A p.L400M . . . TMEM70 54968 broad.mit.edu 36 8 75056409 75056409 + Nonstop_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017866 exon3 c.G782T p.X261L . . . PI15 51050 broad.mit.edu 36 8 75900085 75900085 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015886 exon2 c.C46A p.L16I . . . PI15 51050 broad.mit.edu 36 8 75900167 75900167 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015886 exon2 c.C128T p.A43V . . . ZFHX4 79776 broad.mit.edu 36 8 77780204 77780204 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon2 c.G1326T p.E442D . . . ZFHX4 79776 broad.mit.edu 36 8 77781139 77781139 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon2 c.G2261A p.G754E . . . ZFHX4 79776 broad.mit.edu 36 8 77927532 77927532 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon10 c.C5820T p.G1940G . . . ZFHX4 79776 broad.mit.edu 36 8 77928619 77928619 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024721 exon10 c.C6907T p.R2303W . . . ZFHX4 79776 broad.mit.edu 36 8 77930312 77930312 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon10 c.C8600A p.S2867Y . . . ZFHX4 79776 broad.mit.edu 36 8 77938171 77938171 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024721 exon11 c.C9666A p.I3222I . . . HEY1 23462 broad.mit.edu 36 8 80840335 80840335 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012258 exon5 c.T558C p.H186H . . . MRPS28 28957 broad.mit.edu 36 8 81077951 81077951 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014018 exon2 c.A233G p.E78G . . . TPD52 7163 broad.mit.edu 36 8 81118993 81118993 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001025253 exon6 c.G419A p.R140H . . . PAG1 55824 broad.mit.edu 36 8 82051694 82051694 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018440 exon9 c.C939T p.I313I . . . SLC10A5 347051 broad.mit.edu 36 8 82768860 82768860 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010893 exon1 c.C903T p.F301F . . . SLC10A5 347051 broad.mit.edu 36 8 82769035 82769035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010893 exon1 c.C728T p.T243I . . . LRRCC1 85444 broad.mit.edu 36 8 86240981 86240981 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033402 exon18 c.T2953G p.C985G . . . WWP1 11059 broad.mit.edu 36 8 87519951 87519951 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007013 exon17 c.G1771T p.D591Y . . . FAM82B 51115 broad.mit.edu 36 8 87556266 87556266 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016033 exon9 c.C793A p.L265I . . . CNGB3 54714 broad.mit.edu 36 8 87657363 87657363 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019098 exon18 c.G2215T p.D739Y . . . MFHAS1 9258 broad.mit.edu 36 8 8786069 8786069 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004225 exon1 c.G1910A p.R637H . . . CNBD1 168975 broad.mit.edu 36 8 88368004 88368004 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173538 exon8 c.C1031A p.P344H . . . DCAF4L2 138009 broad.mit.edu 36 8 88955199 88955199 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152418 exon1 c.C117T p.F39F . . . MMP16 4325 broad.mit.edu 36 8 89200056 89200056 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005941 exon5 c.A860C p.Q287P . . . RIPK2 8767 broad.mit.edu 36 8 90844238 90844238 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003821 exon2 c.C218A p.A73D . . . OSGIN2 734 broad.mit.edu 36 8 91002571 91002571 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004337 exon5 c.A486C p.R162R . . . OTUD6B 51633 broad.mit.edu 36 8 92165490 92165490 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016023 exon6 c.G859T p.E287X . . . SLC26A7 115111 broad.mit.edu 36 8 92377044 92377044 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134266 exon4 c.C414T p.S138S . . . SLC26A7 115111 broad.mit.edu 36 8 92470746 92470746 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134266 exon16 c.A1680C p.E560D . . . RUNX1T1 862 broad.mit.edu 36 8 93052246 93052246 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198626 exon12 c.C1355T p.A452V . . . RUNX1T1 862 broad.mit.edu 36 8 93067645 93067645 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001198626 exon10 c.G1162T p.E388X . . . RBM12B 389677 broad.mit.edu 36 8 94815146 94815146 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203390 exon3 c.G2669A p.R890H . . . RBM12B 389677 broad.mit.edu 36 8 94816025 94816025 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203390 exon3 c.G1790A p.R597H . . . RBM12B 389677 broad.mit.edu 36 8 94816601 94816601 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203390 exon3 c.G1214T p.R405I . . . CDH17 1015 broad.mit.edu 36 8 95227571 95227571 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144663 exon15 c.G1928T p.G643V . . . GEM 2669 broad.mit.edu 36 8 95341799 95341799 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181702 exon2 c.C109A p.P37T . . . RAD54B 25788 broad.mit.edu 36 8 95461710 95461710 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012415 exon12 c.A2086C p.I696L . . . KIAA1429 25962 broad.mit.edu 36 8 95634831 95634831 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_183009 exon1 c.G21T p.M7I . . . INTS8 55656 broad.mit.edu 36 8 95922970 95922970 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017864 exon9 c.G1093T p.E365X . . . CCNE2 9134 broad.mit.edu 36 8 95974256 95974256 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057749 exon5 c.C283A p.L95I . . . MTERFD1 51001 broad.mit.edu 36 8 97320974 97320974 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015942 exon8 c.C1175A p.S392Y . . . MTERFD1 51001 broad.mit.edu 36 8 97338414 97338414 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015942 exon3 c.C439T p.R147X . . . MTERFD1 51001 broad.mit.edu 36 8 97339781 97339781 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015942 exon2 c.A314G p.D105G . . . SDC2 6383 broad.mit.edu 36 8 97689804 97689804 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002998 exon4 c.C372T p.A124A . . . MTDH 92140 broad.mit.edu 36 8 98772438 98772438 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178812 exon6 c.T894C p.S298S . . . MTDH 92140 broad.mit.edu 36 8 98781179 98781179 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178812 exon7 c.C1070A p.S357Y . . . HRSP12 10247 broad.mit.edu 36 8 99184301 99184301 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005836 exon6 c.G359A p.R120Q . . . VPS13B 157680 broad.mit.edu 36 8 100218163 100218163 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GRHL2 79977 broad.mit.edu 36 8 102624644 102624644 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UBR5 51366 broad.mit.edu 36 8 103376378 103376378 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PRSS55 203074 broad.mit.edu 36 8 10433721 10433721 + 3'UTR SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RIMS2 9699 broad.mit.edu 36 8 104734095 104734095 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PKHD1L1 93035 broad.mit.edu 36 8 110536119 110536119 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EBAG9 9166 broad.mit.edu 36 8 110638333 110638333 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FER1L6 654463 broad.mit.edu 36 8 125084775 125084775 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . GSDMC 56169 broad.mit.edu 36 8 130832969 130832969 + Splice_Site SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ADCY8 114 broad.mit.edu 36 8 131866914 131866914 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . FAM135B 51059 broad.mit.edu 36 8 139392350 139392350 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZNF623 9831 broad.mit.edu 36 8 144803185 144803185 + 5'UTR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TUSC3 7991 broad.mit.edu 36 8 15650447 15650447 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . EFHA2 286097 broad.mit.edu 36 8 16983630 16983630 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MYOM2 9172 broad.mit.edu 36 8 2058929 2058929 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . DPYSL2 1808 broad.mit.edu 36 8 26557533 26557533 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CSMD1 64478 broad.mit.edu 36 8 2796033 2796033 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C8orf80 389643 broad.mit.edu 36 8 27980945 27980945 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . KCNU1 157855 broad.mit.edu 36 8 36865528 36865528 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ADAM2 2515 broad.mit.edu 36 8 39732394 39732394 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . POLB 5423 broad.mit.edu 36 8 42346517 42346517 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . HOOK3 84376 broad.mit.edu 36 8 42948502 42948502 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . HGSNAT 138050 broad.mit.edu 36 8 43165896 43165896 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ST18 9705 broad.mit.edu 36 8 53191540 53191540 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RPS20 6224 broad.mit.edu 36 8 57148954 57148954 + RNA SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CA8 767 broad.mit.edu 36 8 61302056 61302056 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RAB2A 5862 broad.mit.edu 36 8 61633924 61633924 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CLVS1 157807 broad.mit.edu 36 8 62451904 62451904 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CYP7B1 9420 broad.mit.edu 36 8 65671741 65671741 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CSPP1 79848 broad.mit.edu 36 8 68149031 68149031 + Splice_Site SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PREX2 80243 broad.mit.edu 36 8 69113086 69113086 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CRISPLD1 83690 broad.mit.edu 36 8 76104172 76104172 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CNBD1 168975 broad.mit.edu 36 8 87986546 87986546 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . MMP16 4325 broad.mit.edu 36 8 89150710 89150710 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RUNX1T1 862 broad.mit.edu 36 8 93068286 93068286 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PTDSS1 9791 broad.mit.edu 36 8 97381092 97381092 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . POP1 10940 broad.mit.edu 36 8 99216069 99216069 + Intron SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . INSL6 11172 broad.mit.edu 36 9 5153941 5153942 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007179 exon2 c.614_615insA p.R205fs . . . ANKS6 203286 broad.mit.edu 36 9 100592254 100592254 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173551 exon2 c.A815G p.D272G . . . COL15A1 1306 broad.mit.edu 36 9 100789398 100789398 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001855 exon4 c.G650A p.G217D . . . COL15A1 1306 broad.mit.edu 36 9 100838432 100838432 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001855 exon21 c.A2342G p.D781G . . . COL15A1 1306 broad.mit.edu 36 9 100840802 100840802 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001855 exon22 c.A2441C p.N814T . . . TGFBR1 7046 broad.mit.edu 36 9 100939992 100939992 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130916 exon3 c.C374T p.A125V . . . TGFBR1 7046 broad.mit.edu 36 9 100940109 100940109 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001130916 exon3 c.C491T p.S164L . . . ALG2 85365 broad.mit.edu 36 9 101020383 101020383 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033087 exon2 c.C905A p.S302Y . . . TMEFF1 8577 broad.mit.edu 36 9 102311197 102311197 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003692 exon3 c.G396T p.Q132H . . . MURC 347273 broad.mit.edu 36 9 102380331 102380331 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018116 exon1 c.G85A p.A29T . . . ALDOB 229 broad.mit.edu 36 9 103231960 103231960 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000035 exon3 c.C222T p.I74I . . . GRIN3A 116443 broad.mit.edu 36 9 103375541 103375541 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133445 exon9 c.C3084A p.I1028I . . . CYLC2 1539 broad.mit.edu 36 9 104807432 104807432 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001340 exon5 c.A698C p.E233A . . . OR13C4 138804 broad.mit.edu 36 9 106329154 106329154 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001919 exon1 c.C158A p.S53Y . . . OR13C2 392376 broad.mit.edu 36 9 106406977 106406977 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004481 exon1 c.C753A p.F251L . . . SLC44A1 23446 broad.mit.edu 36 9 107150518 107150518 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080546 exon5 c.T465G p.S155S . . . FKTN 2218 broad.mit.edu 36 9 107437155 107437155 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006731 exon10 c.A1175G p.Y392C . . . TAL2 6887 broad.mit.edu 36 9 107464888 107464888 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005421 exon1 c.A290T p.Q97L . . . ZNF462 58499 broad.mit.edu 36 9 108730591 108730591 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021224 exon3 c.G4577A p.R1526H . . . RAD23B 5887 broad.mit.edu 36 9 109120857 109120857 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002874 exon6 c.C557T p.T186M . . . ACTL7B 10880 broad.mit.edu 36 9 110656971 110656971 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006686 exon1 c.G1061A p.R354H . . . ACTL7B 10880 broad.mit.edu 36 9 110657496 110657496 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006686 exon1 c.C536T p.T179M . . . ACTL7B 10880 broad.mit.edu 36 9 110657675 110657675 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006686 exon1 c.C357T p.I119I . . . ACTL7A 10881 broad.mit.edu 36 9 110665029 110665029 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006687 exon1 c.G606A p.S202S . . . IKBKAP 8518 broad.mit.edu 36 9 110699371 110699371 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003640 exon23 c.G2379A p.T793T . . . CTNNAL1 8727 broad.mit.edu 36 9 110754328 110754328 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003798 exon14 c.C1817T p.S606F . . . CTNNAL1 8727 broad.mit.edu 36 9 110801237 110801237 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003798 exon2 c.G262A p.A88T . . . PTPN3 5774 broad.mit.edu 36 9 111212110 111212110 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145372 exon5 c.T572G p.F191C . . . PTPN3 5774 broad.mit.edu 36 9 111224865 111224865 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002829 exon13 c.G1090T p.E364X . . . PTPN3 5774 broad.mit.edu 36 9 111265520 111265520 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002829 exon2 c.C16T p.R6C . . . PALM2-AKAP2 445815 broad.mit.edu 36 9 111727175 111727175 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053016 exon5 c.C386T p.T129M . . . PALM2-AKAP2 445815 broad.mit.edu 36 9 111939349 111939349 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004065 exon2 c.G1278A p.R426R . . . SVEP1 79987 broad.mit.edu 36 9 112245791 112245791 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon27 c.G4494T p.K1498N . . . SVEP1 79987 broad.mit.edu 36 9 112260647 112260647 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon20 c.C3501A p.F1167L . . . SVEP1 79987 broad.mit.edu 36 9 112261192 112261192 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon19 c.C3345A p.F1115L . . . SVEP1 79987 broad.mit.edu 36 9 112268025 112268025 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153366 exon18 c.C3263T p.S1088L . . . LPAR1 1902 broad.mit.edu 36 9 112743699 112743699 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001401 exon3 c.T616C p.Y206H . . . KIAA0368 23392 broad.mit.edu 36 9 113180827 113180827 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080398 exon37 c.A4342G p.N1448D . . . KIAA0368 23392 broad.mit.edu 36 9 113188539 113188539 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080398 exon33 c.G4000T p.E1334X . . . ZNF483 158399 broad.mit.edu 36 9 113344082 113344082 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133464 exon6 c.G1046A p.R349H . . . ZNF483 158399 broad.mit.edu 36 9 113345248 113345248 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133464 exon6 c.C2212T p.R738W . . . PTGR1 22949 broad.mit.edu 36 9 113376902 113376902 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146109 exon8 c.G693T p.K231N . . . PTGR1 22949 broad.mit.edu 36 9 113396348 113396348 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146109 exon3 c.T127C p.F43L . . . C9orf84 158401 broad.mit.edu 36 9 113494000 113494000 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173521 exon25 c.T3886G p.F1296V . . . C9orf84 158401 broad.mit.edu 36 9 113558550 113558550 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173521 exon6 c.C546A p.F182L . . . ROD1 9991 broad.mit.edu 36 9 114070254 114070254 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163790 exon5 c.G340A p.V114M . . . HSDL2 84263 broad.mit.edu 36 9 114272547 114272547 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195822 exon9 c.A940G p.T314A . . . SLC46A2 57864 broad.mit.edu 36 9 114692561 114692561 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033051 exon1 c.C222A p.I74I . . . POLE3 54107 broad.mit.edu 36 9 115211801 115211801 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017443 exon4 c.C181T p.R61W . . . C9orf43 257169 broad.mit.edu 36 9 115226336 115226336 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152786 exon8 c.G726T p.K242N . . . C9orf43 257169 broad.mit.edu 36 9 115227494 115227494 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152786 exon10 c.G915T p.K305N . . . ZNF618 114991 broad.mit.edu 36 9 115851142 115851142 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_133374 exon14 c.T1460C p.V487A . . . COL27A1 85301 broad.mit.edu 36 9 115970449 115970449 + Missense_Mutation SNP G A A rs34578955 byCluster;byFrequency TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032888 exon3 c.G793A p.A265T . . . COL27A1 85301 broad.mit.edu 36 9 116011828 116011828 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032888 exon11 c.G2321A p.R774Q . . . DFNB31 25861 broad.mit.edu 36 9 116226439 116226439 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015404 exon6 c.C1412T p.A471V . . . C9orf91 203197 broad.mit.edu 36 9 116440764 116440764 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153045 exon8 c.T786C p.C262C . . . TNFSF15 9966 broad.mit.edu 36 9 116592622 116592622 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005118 exon4 c.C687T p.N229N . . . TNC 3371 broad.mit.edu 36 9 116848577 116848577 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon17 c.C5058T p.Y1686Y . . . TNC 3371 broad.mit.edu 36 9 116888681 116888681 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002160 exon3 c.C1150T p.R384C . . . PAPPA 5069 broad.mit.edu 36 9 117989597 117989597 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002581 exon2 c.C759T p.I253I . . . PAPPA 5069 broad.mit.edu 36 9 117989667 117989667 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002581 exon2 c.G829A p.A277T . . . PAPPA 5069 broad.mit.edu 36 9 118009676 118009676 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002581 exon3 c.G1599T p.W533C . . . ASTN2 23245 broad.mit.edu 36 9 118527984 118527984 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014010 exon15 c.A2540T p.Q847L . . . TLR4 7099 broad.mit.edu 36 9 119514733 119514733 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138554 exon3 c.A506C p.E169A . . . TLR4 7099 broad.mit.edu 36 9 119515011 119515011 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138554 exon3 c.G784T p.E262X . . . TLR4 7099 broad.mit.edu 36 9 119515496 119515496 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138554 exon3 c.A1269C p.Q423H . . . TLR4 7099 broad.mit.edu 36 9 119516226 119516226 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138554 exon3 c.T1999C p.Y667H . . . DBC1 1620 broad.mit.edu 36 9 120969371 120969371 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014618 exon8 c.C2098T p.R700W . . . CDK5RAP2 55755 broad.mit.edu 36 9 122239623 122239623 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018249 exon25 c.C3726T p.Y1242Y . . . CDK5RAP2 55755 broad.mit.edu 36 9 122241789 122241789 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018249 exon24 c.T3431A p.I1144N . . . FBXW2 26190 broad.mit.edu 36 9 122578272 122578272 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012164 exon5 c.G739T p.D247Y . . . FBXW2 26190 broad.mit.edu 36 9 122590350 122590350 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012164 exon3 c.G8T p.R3I . . . PSMD5 5711 broad.mit.edu 36 9 122628883 122628883 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005047 exon6 c.C795T p.F265F . . . C5 727 broad.mit.edu 36 9 122798371 122798371 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001735 exon22 c.C2819A p.S940Y . . . CEP110 11064 broad.mit.edu 36 9 122890467 122890467 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007018 exon1 c.G42T p.K14N . . . CEP110 11064 broad.mit.edu 36 9 122943547 122943547 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007018 exon16 c.C2551A p.L851I . . . TTLL11 158135 broad.mit.edu 36 9 123791370 123791370 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001139442 exon4 c.C1464T p.I488I . . . MORN5 254956 broad.mit.edu 36 9 123971831 123971831 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198469 exon3 c.G282T p.E94D . . . PTGS1 5742 broad.mit.edu 36 9 124180968 124180968 + Missense_Mutation SNP G A A rs10306140 byFrequency;byHapMap TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000962 exon5 c.G446A p.R149H . . . OR1J1 347168 broad.mit.edu 36 9 124279099 124279099 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004451 exon1 c.G928A p.A310T . . . OR1N1 138883 broad.mit.edu 36 9 124329091 124329091 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012363 exon1 c.C303A p.F101L . . . OR1N2 138882 broad.mit.edu 36 9 124355275 124355275 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004457 exon1 c.A6C p.E2D . . . OR1N2 138882 broad.mit.edu 36 9 124355929 124355929 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004457 exon1 c.C660A p.G220G . . . OR1L8 138881 broad.mit.edu 36 9 124369998 124369998 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001004454 exon1 c.T580C p.F194L . . . OR1L3 26735 broad.mit.edu 36 9 124478112 124478112 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005234 exon1 c.G883T p.D295Y . . . OR1K1 392392 broad.mit.edu 36 9 124602261 124602261 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080859 exon1 c.C39T p.F13F . . . RABGAP1 23637 broad.mit.edu 36 9 124891939 124891939 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012197 exon20 c.G2506A p.E836K . . . RABGAP1 23637 broad.mit.edu 36 9 124900876 124900876 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012197 exon23 c.C2795A p.S932Y . . . PPP6C 5537 broad.mit.edu 36 9 126955750 126955750 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001123369 exon5 c.A486C p.E162D . . . GAPVD1 26130 broad.mit.edu 36 9 127139509 127139509 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015635 exon16 c.C2776T p.R926X . . . PBX3 5090 broad.mit.edu 36 9 127550686 127550686 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006195 exon2 c.G237A p.A79A . . . PBX3 5090 broad.mit.edu 36 9 127768007 127768007 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006195 exon9 c.C1289T p.S430L . . . ANGPTL2 23452 broad.mit.edu 36 9 128893788 128893788 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012098 exon4 c.G1264T p.D422Y . . . GARNL3 84253 broad.mit.edu 36 9 129146357 129146357 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032293 exon15 c.T1274G p.F425C . . . FAM129B 64855 broad.mit.edu 36 9 129329346 129329346 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022833 exon3 c.G263A p.R88H . . . SH2D3C 10044 broad.mit.edu 36 9 129553362 129553362 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142534 exon2 c.G114T p.E38D . . . ENG 2022 broad.mit.edu 36 9 129627039 129627039 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001114753 exon7 c.G852T p.E284D . . . ST6GALNAC6 30815 broad.mit.edu 36 9 129696731 129696731 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013443 exon4 c.A178G p.S60G . . . SLC25A25 114789 broad.mit.edu 36 9 129900801 129900801 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052901 exon1 c.C135A p.F45L . . . DNM1 1759 broad.mit.edu 36 9 130020713 130020713 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005336 exon3 c.G267T p.K89N . . . DNM1 1759 broad.mit.edu 36 9 130050032 130050032 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001005336 exon17 c.G1901T p.R634I . . . CERCAM 51148 broad.mit.edu 36 9 130230517 130230517 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016174 exon6 c.A882G p.A294A . . . SPTAN1 6709 broad.mit.edu 36 9 130386589 130386589 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195532 exon17 c.C2401T p.R801X . . . SPTAN1 6709 broad.mit.edu 36 9 130434565 130434565 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195532 exon52 c.G6919T p.E2307X . . . C9orf114 51490 broad.mit.edu 36 9 130631239 130631239 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016390 exon2 c.G53T p.R18M . . . CCBL1 883 broad.mit.edu 36 9 130644786 130644786 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001122672 exon3 c.G169T p.D57Y . . . NUP188 23511 broad.mit.edu 36 9 130795695 130795695 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015354 exon27 c.G2918A p.R973Q . . . TOR1A 1861 broad.mit.edu 36 9 131616208 131616208 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000113 exon5 c.G863A p.R288Q . . . MPDZ 8777 broad.mit.edu 36 9 13166160 13166160 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003829 exon19 c.C2906T p.S969F . . . NCS1 23413 broad.mit.edu 36 9 132021859 132021859 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128826 exon4 c.C209T p.A70V . . . FUBP3 8939 broad.mit.edu 36 9 132488831 132488831 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003934 exon11 c.G887T p.S296I . . . LAMC3 10319 broad.mit.edu 36 9 132891551 132891551 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006059 exon2 c.C432T p.S144S . . . NUP214 8021 broad.mit.edu 36 9 133039324 133039324 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005085 exon22 c.C2955T p.S985S . . . NUP214 8021 broad.mit.edu 36 9 133054282 133054282 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005085 exon26 c.A3517G p.K1173E . . . POMT1 10585 broad.mit.edu 36 9 133386594 133386594 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007171 exon18 c.C1805T p.S602L . . . SETX 23064 broad.mit.edu 36 9 134129842 134129842 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon26 c.A7639G p.I2547V . . . SETX 23064 broad.mit.edu 36 9 134163452 134163452 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon13 c.G5617T p.E1873X . . . SETX 23064 broad.mit.edu 36 9 134193217 134193217 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon10 c.G3589A p.D1197N . . . SETX 23064 broad.mit.edu 36 9 134194243 134194243 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015046 exon10 c.G2563T p.E855X . . . C9orf171 389799 broad.mit.edu 36 9 134402907 134402907 + Missense_Mutation SNP A T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A T A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_207417 exon5 c.A731T p.K244M . . . C9orf9 11092 broad.mit.edu 36 9 134749180 134749180 + Missense_Mutation SNP C T T rs34208349 unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018956 exon2 c.C25T p.R9C . . . SURF6 6838 broad.mit.edu 36 9 135188971 135188971 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006753 exon5 c.C641T p.A214V . . . C9orf96 169436 broad.mit.edu 36 9 135259846 135259846 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153710 exon17 c.C1845A p.G615G . . . TMEM8C 389827 broad.mit.edu 36 9 135375221 135375221 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001080483 exon2 c.C146T p.A49V . . . DBH 1621 broad.mit.edu 36 9 135499216 135499216 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000787 exon5 c.G977T p.R326I . . . COL5A1 1289 broad.mit.edu 36 9 136857565 136857565 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000093 exon63 c.C5061T p.S1687S . . . FCN1 2219 broad.mit.edu 36 9 136941700 136941700 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002003 exon9 c.C746T p.T249M . . . OLFM1 10439 broad.mit.edu 36 9 137151771 137151771 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014279 exon6 c.T1330C p.Y444H . . . GLT6D1 360203 broad.mit.edu 36 9 137657750 137657750 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182974 exon4 c.C243A p.V81V . . . CAMSAP1 157922 broad.mit.edu 36 9 137843150 137843150 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015447 exon17 c.G4635T p.K1545N . . . SNAPC4 6621 broad.mit.edu 36 9 138401778 138401778 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003086 exon12 c.C1305T p.S435S . . . SEC16A 9919 broad.mit.edu 36 9 138488914 138488914 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014866 exon3 c.G2975A p.G992E . . . SEC16A 9919 broad.mit.edu 36 9 138489050 138489050 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014866 exon3 c.G2839A p.A947T . . . PNPLA7 375775 broad.mit.edu 36 9 139494696 139494696 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098537 exon23 c.C2469A p.I823I . . . CACNA1B 774 broad.mit.edu 36 9 140116988 140116988 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000718 exon37 c.C5227T p.R1743C . . . FREM1 158326 broad.mit.edu 36 9 14766171 14766171 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144966 exon26 c.G4473A p.E1491E . . . FREM1 158326 broad.mit.edu 36 9 14831511 14831511 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144966 exon11 c.C1815A p.I605I . . . C9orf93 203238 broad.mit.edu 36 9 15561671 15561671 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173550 exon3 c.G91T p.E31X . . . C9orf93 203238 broad.mit.edu 36 9 15836717 15836717 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173550 exon22 c.G3285T p.K1095N . . . BNC2 54796 broad.mit.edu 36 9 16409048 16409048 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017637 exon7 c.G3239A p.R1080Q . . . CNTLN 54875 broad.mit.edu 36 9 17226537 17226537 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017738 exon5 c.A800G p.Q267R . . . CNTLN 54875 broad.mit.edu 36 9 17356696 17356696 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017738 exon13 c.T1968C p.C656C . . . ADAMTSL1 92949 broad.mit.edu 36 9 18743445 18743445 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040272 exon16 c.C2156T p.T719M . . . ADAMTSL1 92949 broad.mit.edu 36 9 18785428 18785428 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040272 exon20 c.C3711A p.I1237I . . . SLC24A2 25769 broad.mit.edu 36 9 19776464 19776464 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020344 exon2 c.C401T p.A134V . . . SMARCA2 6595 broad.mit.edu 36 9 2022958 2022958 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003070 exon3 c.G232A p.D78N . . . SMARCA2 6595 broad.mit.edu 36 9 2113819 2113819 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003070 exon27 c.A3863G p.D1288G . . . IFNA4 3441 broad.mit.edu 36 9 21177469 21177469 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021068 exon1 c.C62A p.S21Y . . . IFNA7 3444 broad.mit.edu 36 9 21191841 21191841 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021057 exon1 c.T324G p.F108L . . . IFNA16 3449 broad.mit.edu 36 9 21207155 21207155 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002173 exon1 c.C150A p.F50L . . . KLHL9 55958 broad.mit.edu 36 9 21323218 21323218 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018847 exon1 c.C1641T p.I547I . . . KLHL9 55958 broad.mit.edu 36 9 21324512 21324512 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018847 exon1 c.C347A p.S116Y . . . IFNA6 3443 broad.mit.edu 36 9 21340605 21340605 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021002 exon1 c.G282T p.K94N . . . IFNA6 3443 broad.mit.edu 36 9 21340750 21340750 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021002 exon1 c.G137T p.R46I . . . CDKN2A 1029 broad.mit.edu 36 9 21964608 21964608 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_058197 exon1 c.A219C p.E73D . . . DMRTA1 63951 broad.mit.edu 36 9 22441144 22441144 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_022160 exon2 c.C749A p.S250X . . . TEK 7010 broad.mit.edu 36 9 27099607 27099607 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000459 exon1 c.T19G p.L7V . . . MOBKL2B 79817 broad.mit.edu 36 9 27349143 27349143 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024761 exon3 c.C510T p.F170F . . . LINGO2 158038 broad.mit.edu 36 9 27939138 27939138 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152570 exon7 c.C1532T p.A511V . . . KIAA0020 9933 broad.mit.edu 36 9 2819936 2819936 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014878 exon8 c.G690A p.Q230Q . . . ACO1 48 broad.mit.edu 36 9 32395519 32395519 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002197 exon2 c.C15T p.F5F . . . DDX58 23586 broad.mit.edu 36 9 32471340 32471340 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014314 exon11 c.C1636T p.R546W . . . TOPORS 10210 broad.mit.edu 36 9 32532375 32532375 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195622 exon2 c.C1953T p.Y651Y . . . TAF1L 138474 broad.mit.edu 36 9 32620502 32620502 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.C5076A p.V1692V . . . TAF1L 138474 broad.mit.edu 36 9 32623489 32623489 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.C2089A p.L697I . . . TAF1L 138474 broad.mit.edu 36 9 32624481 32624481 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153809 exon1 c.G1097A p.R366Q . . . DNAJA1 3301 broad.mit.edu 36 9 33020555 33020555 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001539 exon5 c.T533C p.M178T . . . B4GALT1 2683 broad.mit.edu 36 9 33103458 33103458 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001497 exon6 c.G1191A p.P397P . . . B4GALT1 2683 broad.mit.edu 36 9 33103815 33103815 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001497 exon5 c.A1021G p.I341V . . . B4GALT1 2683 broad.mit.edu 36 9 33110551 33110551 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001497 exon3 c.A702C p.E234D . . . DNAI1 27019 broad.mit.edu 36 9 34479430 34479430 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012144 exon5 c.G371A p.R124H . . . DNAI1 27019 broad.mit.edu 36 9 34490801 34490801 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012144 exon11 c.A983G p.D328G . . . DNAI1 27019 broad.mit.edu 36 9 34503116 34503116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012144 exon16 c.G1496A p.G499D . . . C9orf131 138724 broad.mit.edu 36 9 35034145 35034145 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040411 exon2 c.C1300T p.L434F . . . PIGO 84720 broad.mit.edu 36 9 35082699 35082699 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032634 exon7 c.G1185A p.Q395Q . . . RUSC2 9853 broad.mit.edu 36 9 35537735 35537735 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014806 exon2 c.C1217T p.S406F . . . TPM2 7169 broad.mit.edu 36 9 35674535 35674535 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213674 exon7 c.G652T p.E218X . . . TPM2 7169 broad.mit.edu 36 9 35675749 35675749 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213674 exon3 c.G269A p.R90H . . . TPM2 7169 broad.mit.edu 36 9 35679809 35679809 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_213674 exon1 c.C6T p.D2D . . . NPR2 4882 broad.mit.edu 36 9 35783956 35783956 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003995 exon2 c.G729T p.E243D . . . NPR2 4882 broad.mit.edu 36 9 35791725 35791725 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003995 exon8 c.C1522A p.H508N . . . SPAG8 26206 broad.mit.edu 36 9 35800915 35800915 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039592 exon3 c.A1004G p.Y335C . . . OR2S2 56656 broad.mit.edu 36 9 35947817 35947817 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019897 exon1 c.C279A p.I93I . . . RECK 8434 broad.mit.edu 36 9 36108832 36108832 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021111 exon18 c.C2332T p.R778C . . . RECK 8434 broad.mit.edu 36 9 36111661 36111661 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021111 exon20 c.C2670T p.V890V . . . RNF38 152006 broad.mit.edu 36 9 36347936 36347936 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_194329 exon4 c.C424A p.H142N . . . DOCK8 81704 broad.mit.edu 36 9 367067 367067 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190458 exon19 c.G2092A p.E698K . . . ZCCHC7 84186 broad.mit.edu 36 9 37116459 37116459 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032226 exon2 c.G130T p.D44Y . . . FBXO10 26267 broad.mit.edu 36 9 37506074 37506074 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012166 exon10 c.G2523T p.K841N . . . FRMPD1 22844 broad.mit.edu 36 9 37736408 37736408 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014907 exon16 c.G4379T p.S1460I . . . FRMPD1 22844 broad.mit.edu 36 9 37736645 37736645 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014907 exon16 c.A4616C p.K1539T . . . RG9MTD3 158234 broad.mit.edu 36 9 37753707 37753707 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144964 exon4 c.G377T p.R126I . . . ALDH1B1 219 broad.mit.edu 36 9 38385884 38385884 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000692 exon2 c.G139A p.D47N . . . ALDH1B1 219 broad.mit.edu 36 9 38386461 38386461 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000692 exon2 c.C716T p.T239M . . . ALDH1B1 219 broad.mit.edu 36 9 38386875 38386875 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000692 exon2 c.G1130A p.G377D . . . CNTNAP3 79937 broad.mit.edu 36 9 39099178 39099178 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033655 exon15 c.C2344T p.P782S . . . CNTNAP3 79937 broad.mit.edu 36 9 39130580 39130580 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033655 exon12 c.T1812G p.L604L . . . FAM75A3 727830 broad.mit.edu 36 9 40694210 40694210 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001083124 exon4 c.C1867T p.L623L . . . ZNF658 26149 broad.mit.edu 36 9 40764705 40764705 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033160 exon5 c.A570G p.E190E . . . GLIS3 169792 broad.mit.edu 36 9 4107826 4107826 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152629 exon3 c.G1187A p.R396H . . . DOCK8 81704 broad.mit.edu 36 9 418479 418479 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190458 exon33 c.C4156T p.R1386C . . . SLC1A1 6505 broad.mit.edu 36 9 4554401 4554401 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004170 exon4 c.C383T p.A128V . . . SLC1A1 6505 broad.mit.edu 36 9 4566583 4566583 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004170 exon10 c.C1013A p.P338H . . . PPAPDC2 403313 broad.mit.edu 36 9 4652968 4652968 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203453 exon1 c.A593G p.D198G . . . RCL1 10171 broad.mit.edu 36 9 4839456 4839456 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005772 exon8 c.G877A p.V293I . . . JAK2 3717 broad.mit.edu 36 9 5054982 5054982 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004972 exon9 c.G1156T p.E386X . . . JAK2 3717 broad.mit.edu 36 9 5079770 5079770 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004972 exon20 c.G2668T p.E890X . . . INSL6 11172 broad.mit.edu 36 9 5154170 5154170 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007179 exon2 c.A385C p.R129R . . . RLN2 6019 broad.mit.edu 36 9 5290394 5290394 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_134441 exon2 c.T262C p.S88P . . . ERMP1 79956 broad.mit.edu 36 9 5815132 5815132 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024896 exon3 c.T728C p.V243A . . . KIAA2026 158358 broad.mit.edu 36 9 5911788 5911788 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001017969 exon8 c.C4208A p.S1403Y . . . IL33 90865 broad.mit.edu 36 9 6240494 6240494 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001199640 exon3 c.G112T p.E38X . . . TPD52L3 89882 broad.mit.edu 36 9 6318677 6318677 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001875 exon1 c.G82A p.E28K . . . GLDC 2731 broad.mit.edu 36 9 6577248 6577248 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000170 exon15 c.C1743A p.P581P . . . ANKRD20A3 441425 broad.mit.edu 36 9 67558287 67558287 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012419 exon15 c.G2026A p.D676N . . . ANKRD20A4 728747 broad.mit.edu 36 9 68713407 68713407 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098805 exon15 c.G1883T p.R628I . . . KANK1 23189 broad.mit.edu 36 9 702443 702443 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015158 exon3 c.C1677T p.V559V . . . APBA1 320 broad.mit.edu 36 9 71260995 71260995 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163 exon8 c.C1776T p.F592F . . . PTAR1 375743 broad.mit.edu 36 9 71538962 71538962 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099666 exon4 c.A352C p.N118H . . . C9orf135 138255 broad.mit.edu 36 9 71691589 71691589 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010940 exon5 c.G465A p.T155T . . . SMC5 23137 broad.mit.edu 36 9 72069114 72069114 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015110 exon2 c.C260T p.S87L . . . SMC5 23137 broad.mit.edu 36 9 72154892 72154892 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015110 exon23 c.C2932T p.R978X . . . TRPM3 80036 broad.mit.edu 36 9 72342033 72342033 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007471 exon25 c.C3780T p.I1260I . . . TRPM3 80036 broad.mit.edu 36 9 72424948 72424948 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007471 exon15 c.C1957A p.L653M . . . TMEM2 23670 broad.mit.edu 36 9 73509473 73509473 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013390 exon18 c.A3052G p.N1018D . . . TMEM2 23670 broad.mit.edu 36 9 73534983 73534983 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013390 exon9 c.G1780T p.D594Y . . . TMEM2 23670 broad.mit.edu 36 9 73550150 73550150 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_013390 exon4 c.G638T p.S213I . . . ALDH1A1 216 broad.mit.edu 36 9 74716749 74716749 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000689 exon10 c.T1145C p.V382A . . . RORB 6096 broad.mit.edu 36 9 76470254 76470254 + Missense_Mutation SNP G C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G C G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006914 exon7 c.G923C p.C308S . . . TRPM6 140803 broad.mit.edu 36 9 76646955 76646955 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177310 exon4 c.G262T p.D88Y . . . C9orf41 138199 broad.mit.edu 36 9 76803432 76803432 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152420 exon5 c.G812A p.R271Q . . . PCSK5 5125 broad.mit.edu 36 9 77900765 77900765 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001190482 exon8 c.C1034A p.P345H . . . GCNT1 2650 broad.mit.edu 36 9 78307984 78307984 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001097633 exon3 c.C867T p.F289F . . . PRUNE2 158471 broad.mit.edu 36 9 78510072 78510072 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015225 exon8 c.C6938T p.T2313M . . . PRUNE2 158471 broad.mit.edu 36 9 78510919 78510919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015225 exon8 c.C6091T p.P2031S . . . PRUNE2 158471 broad.mit.edu 36 9 78515447 78515447 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015225 exon8 c.C1563A p.F521L . . . VPS13A 23230 broad.mit.edu 36 9 79010778 79010778 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon5 c.A348C p.K116N . . . VPS13A 23230 broad.mit.edu 36 9 79019068 79019068 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon10 c.G700A p.D234N . . . VPS13A 23230 broad.mit.edu 36 9 79057014 79057014 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018037 exon22 c.G2214T p.Q738H . . . VPS13A 23230 broad.mit.edu 36 9 79100291 79100291 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001018037 exon32 c.A3404C p.N1135T . . . VPS13A 23230 broad.mit.edu 36 9 79119268 79119268 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001018037 exon36 c.T4163G p.L1388R . . . GNAQ 2776 broad.mit.edu 36 9 79602314 79602314 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002072 exon4 c.C547T p.R183X . . . GNAQ 2776 broad.mit.edu 36 9 79620425 79620425 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002072 exon3 c.T403G p.L135V . . . CEP78 84131 broad.mit.edu 36 9 80069007 80069007 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098802 exon13 c.C1583A p.S528Y . . . CEP78 84131 broad.mit.edu 36 9 80071301 80071301 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001098802 exon16 c.C1972T p.R658W . . . TLE4 7091 broad.mit.edu 36 9 81379657 81379657 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007005 exon3 c.C193T p.R65W . . . TLE1 7088 broad.mit.edu 36 9 83395776 83395776 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005077 exon16 c.T1593C p.N531N . . . PTPRD 5789 broad.mit.edu 36 9 8365974 8365974 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040712 exon23 c.T3393C p.C1131C . . . FAM75D1 389763 broad.mit.edu 36 9 83796488 83796488 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001670 exon4 c.G1283T p.W428L . . . PTPRD 5789 broad.mit.edu 36 9 8497303 8497303 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001040712 exon10 c.G1666A p.E556K . . . C9orf103 414328 broad.mit.edu 36 9 85448246 85448246 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001551 exon5 c.G295T p.D99Y . . . UBQLN1 29979 broad.mit.edu 36 9 85466575 85466575 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053067 exon10 c.G1633T p.G545X . . . UBQLN1 29979 broad.mit.edu 36 9 85487727 85487727 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053067 exon3 c.A407C p.N136T . . . KIF27 55582 broad.mit.edu 36 9 85696228 85696228 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017576 exon6 c.A1611C p.K537N . . . C9orf64 84267 broad.mit.edu 36 9 85761178 85761178 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032307 exon1 c.G58A p.D20N . . . RMI1 80010 broad.mit.edu 36 9 85806219 85806219 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024945 exon3 c.A498C p.K166N . . . NTRK2 4915 broad.mit.edu 36 9 86529008 86529008 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018064 exon10 c.C770T p.S257F . . . ISCA1 81689 broad.mit.edu 36 9 88070904 88070904 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_030940 exon4 c.G264T p.K88N . . . ZCCHC6 79670 broad.mit.edu 36 9 88130247 88130247 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001185074 exon8 c.G1242T p.V414V . . . DAPK1 1612 broad.mit.edu 36 9 89445106 89445106 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004938 exon8 c.G703A p.E235K . . . DAPK1 1612 broad.mit.edu 36 9 89504934 89504935 + Nonsense_Mutation DNP CG TA TA novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 CG CG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004938 exon24 c.2833_2834TA . . . NA C9orf79 286234 broad.mit.edu 36 9 89689669 89689669 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178828 exon4 c.C447T p.G149G . . . C9orf79 286234 broad.mit.edu 36 9 89691141 89691141 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178828 exon4 c.C1919A p.S640Y . . . C9orf79 286234 broad.mit.edu 36 9 89693324 89693324 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178828 exon4 c.C4102T p.R1368C . . . LOC286238 286238 broad.mit.edu 36 9 90452226 90452226 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001100111 exon2 c.C237T p.S79S . . . SECISBP2 79048 broad.mit.edu 36 9 91146171 91146171 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024077 exon10 c.C1392T p.H464H . . . DIRAS2 54769 broad.mit.edu 36 9 92415396 92415396 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017594 exon2 c.C534T p.I178I . . . ROR2 4920 broad.mit.edu 36 9 93526406 93526406 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004560 exon9 c.G2191A p.E731K . . . SPTLC1 10558 broad.mit.edu 36 9 93849282 93849282 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006415 exon11 c.G1074T p.E358D . . . SPTLC1 10558 broad.mit.edu 36 9 93852068 93852068 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006415 exon9 c.A883C p.I295L . . . NOL8 55035 broad.mit.edu 36 9 94120726 94120726 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017948 exon6 c.C481T p.R161C . . . CENPP 401541 broad.mit.edu 36 9 94134318 94134318 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012267 exon2 c.G153A p.K51K . . . ZNF484 83744 broad.mit.edu 36 9 94649609 94649609 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007101 exon4 c.T1173C p.F391F . . . ZNF484 83744 broad.mit.edu 36 9 94649922 94649922 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007101 exon4 c.A860T p.Y287F . . . ZNF484 83744 broad.mit.edu 36 9 94650478 94650478 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001007101 exon4 c.C304T p.R102C . . . FAM120A 23196 broad.mit.edu 36 9 95352687 95352687 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014612 exon12 c.G2167T p.V723L . . . FAM120A 23196 broad.mit.edu 36 9 95364321 95364321 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014612 exon17 c.G2959T p.G987X . . . PTCH1 5727 broad.mit.edu 36 9 97249085 97249085 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001083605 exon23 c.C3821T p.S1274L . . . C9orf102 375748 broad.mit.edu 36 9 97699994 97699994 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001010895 exon3 c.C547T p.R183C . . . HABP4 22927 broad.mit.edu 36 9 98290254 98290254 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014282 exon7 c.A1062C p.T354T . . . CDC14B 8555 broad.mit.edu 36 9 98366889 98366889 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003671 exon3 c.G318T p.K106N . . . ZNF782 158431 broad.mit.edu 36 9 98620549 98620549 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001662 exon6 c.G1577T p.R526I . . . ZNF782 158431 broad.mit.edu 36 9 98620885 98620885 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001662 exon6 c.G1241A p.R414K . . . ZNF782 158431 broad.mit.edu 36 9 98621386 98621386 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001662 exon6 c.A740C p.K247T . . . ZNF782 158431 broad.mit.edu 36 9 98621777 98621777 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001662 exon6 c.A349C p.I117L . . . ZNF322B 387328 broad.mit.edu 36 9 99001226 99001226 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_199005 exon1 c.A389G p.D130G . . . LOC57653 57653 broad.mit.edu 36 9 99168730 99168730 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020893 exon31 c.C4248T p.C1416C . . . TDRD7 23424 broad.mit.edu 36 9 99297811 99297811 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014290 exon17 c.G3122A p.R1041Q . . . NCBP1 4686 broad.mit.edu 36 9 99442960 99442960 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002486 exon2 c.C98T p.S33F . . . CORO2A 7464 broad.mit.edu 36 9 99928702 99928702 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052820 exon11 c.A1396G p.T466A . . . CORO2A 7464 broad.mit.edu 36 9 99959644 99959644 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_052820 exon2 c.C120A p.F40L . . . ANKS6 203286 broad.mit.edu 36 9 100586928 100586928 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . COL15A1 1306 broad.mit.edu 36 9 100806993 100806993 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RNF20 56254 broad.mit.edu 36 9 103348920 103348920 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . NIPSNAP3B 55335 broad.mit.edu 36 9 106571131 106571131 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C9orf4 23732 broad.mit.edu 36 9 110949299 110949299 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . MUSK 4593 broad.mit.edu 36 9 112578068 112578068 + Intron SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C9orf84 158401 broad.mit.edu 36 9 113507476 113507476 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C9orf84 158401 broad.mit.edu 36 9 113550308 113550308 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ROD1 9991 broad.mit.edu 36 9 114036914 114036914 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . C9orf91 203197 broad.mit.edu 36 9 116419407 116419407 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . RC3H2 54542 broad.mit.edu 36 9 124657823 124657823 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . RC3H2 54542 broad.mit.edu 36 9 124682364 124682364 + RNA SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . STRBP 55342 broad.mit.edu 36 9 124975770 124975770 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . PBX3 5090 broad.mit.edu 36 9 127765203 127765203 + Splice_Site SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CACNA1B 774 broad.mit.edu 36 9 140087887 140087887 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SNAPC3 6619 broad.mit.edu 36 9 15447949 15447949 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C9orf93 203238 broad.mit.edu 36 9 15864673 15864673 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TMEM215 401498 broad.mit.edu 36 9 32774891 32774891 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CCL21 6366 broad.mit.edu 36 9 34699684 34699684 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CCL21 6366 broad.mit.edu 36 9 34699994 34699994 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC1A1 6505 broad.mit.edu 36 9 4556090 4556090 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FAM189A2 9413 broad.mit.edu 36 9 71182214 71182214 + Splice_Site SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . C9orf41 138199 broad.mit.edu 36 9 76804458 76804458 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 9 81196325 81196325 + IGR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . TLE4 7091 broad.mit.edu 36 9 81509643 81509643 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TLE4 7091 broad.mit.edu 36 9 81511866 81511866 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 9 83865728 83865728 + IGR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SLC28A3 64078 broad.mit.edu 36 9 86145301 86145301 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . AGTPBP1 23287 broad.mit.edu 36 9 87424044 87424044 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . SECISBP2 79048 broad.mit.edu 36 9 91137635 91137635 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . ROR2 4920 broad.mit.edu 36 9 93525753 93525753 + 3'UTR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . IARS 3376 broad.mit.edu 36 9 94091401 94091401 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CTSL2 1515 broad.mit.edu 36 9 98837805 98837805 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . PCDH11X 27328 broad.mit.edu 36 X 91019271 91019271 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A - A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon2 c.1376delA p.E459fs . . . TAF7L 54457 broad.mit.edu 36 X 100418002 100418002 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024885 exon10 c.G1120A p.E374K . . . TAF7L 54457 broad.mit.edu 36 X 100429141 100429141 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024885 exon2 c.T305G p.F102C . . . GPRASP1 9737 broad.mit.edu 36 X 101797091 101797091 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099411 exon3 c.T1594C p.S532P . . . GPRASP1 9737 broad.mit.edu 36 X 101799307 101799307 + Nonsense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099411 exon3 c.T3810G p.Y1270X . . . TCEAL4 79921 broad.mit.edu 36 X 102728425 102728425 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_024863 exon3 c.G166A p.E56K . . . NRK 203447 broad.mit.edu 36 X 105012381 105012381 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198465 exon4 c.C205T p.R69X . . . NRK 203447 broad.mit.edu 36 X 105053800 105053800 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198465 exon18 c.C2645T p.P882L . . . TBC1D8B 54885 broad.mit.edu 36 X 105970007 105970007 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198881 exon9 c.G1427A p.R476Q . . . VSIG1 340547 broad.mit.edu 36 X 107196891 107196891 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182607 exon3 c.G283A p.D95N . . . COL4A6 1288 broad.mit.edu 36 X 107305625 107305625 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033641 exon29 c.T2745G p.I915M . . . COL4A5 1287 broad.mit.edu 36 X 107721503 107721503 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000495 exon21 c.G1396T p.G466X . . . KCNE1L 23630 broad.mit.edu 36 X 108754768 108754768 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012282 exon1 c.C138T p.F46F . . . RGAG1 57529 broad.mit.edu 36 X 109581989 109581989 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020769 exon3 c.G1488T p.K496N . . . IL13RA2 3598 broad.mit.edu 36 X 114144914 114144914 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000640 exon10 c.T1128G p.F376L . . . IL13RA2 3598 broad.mit.edu 36 X 114146121 114146121 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000640 exon9 c.G1011A p.S337S . . . MSL3 10943 broad.mit.edu 36 X 11690246 11690246 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006800 exon5 c.A44C p.K15T . . . MSL3 10943 broad.mit.edu 36 X 11700704 11700704 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006800 exon11 c.G927T p.K309N . . . DOCK11 139818 broad.mit.edu 36 X 117564053 117564053 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144658 exon6 c.A504G p.K168K . . . DOCK11 139818 broad.mit.edu 36 X 117661508 117661508 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144658 exon40 c.C4321A p.L1441I . . . DOCK11 139818 broad.mit.edu 36 X 117680760 117680760 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144658 exon45 c.A5053G p.M1685V . . . DOCK11 139818 broad.mit.edu 36 X 117698671 117698671 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_144658 exon49 c.A5659G p.T1887A . . . ZCCHC12 170261 broad.mit.edu 36 X 117844415 117844415 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173798 exon4 c.G1180A p.E394K . . . KIAA1210 57481 broad.mit.edu 36 X 118106032 118106032 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_020721 exon11 c.C3189A p.F1063L . . . UBE2A 7319 broad.mit.edu 36 X 118599518 118599518 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003336 exon4 c.G172T p.E58X . . . UPF3B 65109 broad.mit.edu 36 X 118869855 118869855 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080632 exon2 c.C166T p.R56X . . . XIAP 331 broad.mit.edu 36 X 122862115 122862115 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001167 exon6 c.T1191G p.I397M . . . STAG2 10735 broad.mit.edu 36 X 123004116 123004116 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042750 exon7 c.A402C p.E134D . . . STAG2 10735 broad.mit.edu 36 X 123008937 123008937 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001042750 exon9 c.T720C p.N240N . . . DCAF12L2 340578 broad.mit.edu 36 X 125127540 125127540 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013628 exon1 c.G49A p.E17K . . . TLR7 51284 broad.mit.edu 36 X 12816330 12816330 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016562 exon3 c.C2782A p.L928I . . . OCRL 4952 broad.mit.edu 36 X 128527523 128527523 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001587 exon13 c.A1338G p.R446R . . . OCRL 4952 broad.mit.edu 36 X 128537993 128537993 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001587 exon18 c.C1898A p.S633Y . . . SASH3 54440 broad.mit.edu 36 X 128754414 128754414 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018990 exon6 c.G722A p.R241H . . . ZDHHC9 51114 broad.mit.edu 36 X 128785388 128785388 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016032 exon5 c.G435T p.K145N . . . BCORL1 63035 broad.mit.edu 36 X 128977628 128977628 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021946 exon3 c.C3199T p.R1067W . . . GPR119 139760 broad.mit.edu 36 X 129346607 129346607 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_178471 exon1 c.G496A p.V166M . . . ENOX2 10495 broad.mit.edu 36 X 129641300 129641300 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_182314 exon7 c.C444T p.F148F . . . IGSF1 3547 broad.mit.edu 36 X 130244687 130244687 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001555 exon6 c.C900T p.D300D . . . IGSF1 3547 broad.mit.edu 36 X 130247671 130247671 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001555 exon4 c.T130C p.S44P . . . HS6ST2 90161 broad.mit.edu 36 X 131590800 131590800 + Missense_Mutation SNP T A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T A T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001077188 exon6 c.A1070T p.N357I . . . USP26 83844 broad.mit.edu 36 X 131988729 131988729 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031907 exon1 c.G1186T p.D396Y . . . CCDC160 347475 broad.mit.edu 36 X 133206716 133206716 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001101357 exon2 c.G220A p.E74K . . . PLAC1 10761 broad.mit.edu 36 X 133528016 133528016 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021796 exon3 c.C363T p.S121S . . . SLC9A6 10479 broad.mit.edu 36 X 134934160 134934160 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177651 exon13 c.C1312T p.R438C . . . GPR112 139378 broad.mit.edu 36 X 135232871 135232871 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153834 exon5 c.C339T p.H113H . . . GPR112 139378 broad.mit.edu 36 X 135313133 135313133 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153834 exon22 c.C8640T p.S2880S . . . RAB9A 9367 broad.mit.edu 36 X 13637125 13637125 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001195328 exon2 c.G339A p.E113E . . . FGF13 2258 broad.mit.edu 36 X 137542765 137542765 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001139501 exon8 c.G593A p.R198Q . . . FGF13 2258 broad.mit.edu 36 X 137620676 137620676 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004114 exon1 c.C156T p.F52F . . . F9 2158 broad.mit.edu 36 X 138471660 138471660 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000133 exon8 c.C1150T p.R384X . . . MCF2 4168 broad.mit.edu 36 X 138536113 138536113 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001099855 exon9 c.G772A p.D258N . . . ATP11C 286410 broad.mit.edu 36 X 138736544 138736544 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010986 exon2 c.A141C p.R47S . . . SPANXE 171489 broad.mit.edu 36 X 140613360 140613360 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145665 exon2 c.G222T p.K74N . . . MAGEC1 9947 broad.mit.edu 36 X 140821515 140821515 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005462 exon4 c.G659T p.R220I . . . MAGEC1 9947 broad.mit.edu 36 X 140821620 140821620 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005462 exon4 c.G764T p.R255I . . . MAGEC1 9947 broad.mit.edu 36 X 140822087 140822087 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005462 exon4 c.C1231A p.P411T . . . SLITRK4 139065 broad.mit.edu 36 X 142544307 142544307 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184749 exon2 c.T2284G p.F762V . . . UBE2NL 389898 broad.mit.edu 36 X 142795181 142795181 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001012989 exon1 c.G313A p.V105I . . . SLITRK2 84631 broad.mit.edu 36 X 144713310 144713310 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144003 exon5 c.G1675A p.E559K . . . SLITRK2 84631 broad.mit.edu 36 X 144713437 144713437 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001144003 exon5 c.C1802T p.S601L . . . GLRA2 2742 broad.mit.edu 36 X 14502591 14502591 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001118886 exon3 c.G259T p.E87X . . . FMR1NB 158521 broad.mit.edu 36 X 146870722 146870722 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152578 exon1 c.G108A p.S36S . . . AFF2 2334 broad.mit.edu 36 X 147876623 147876623 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001170628 exon17 c.C2567A p.S856Y . . . FANCB 2187 broad.mit.edu 36 X 14792907 14792907 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001018113 exon3 c.C647T p.S216F . . . MTM1 4534 broad.mit.edu 36 X 149564919 149564919 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000252 exon9 c.G784A p.D262N . . . PASD1 139135 broad.mit.edu 36 X 150593113 150593113 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173493 exon15 c.C1974A p.T658T . . . MAGEA10 4109 broad.mit.edu 36 X 151054106 151054106 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021048 exon4 c.C643T p.L215L . . . MAGEA10 4109 broad.mit.edu 36 X 151054702 151054702 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021048 exon4 c.T47G p.L16R . . . ABCD1 215 broad.mit.edu 36 X 152648004 152648004 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000033 exon2 c.T1024C p.S342P . . . ARHGAP4 393 broad.mit.edu 36 X 152831382 152831382 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001164741 exon13 c.G1628T p.R543I . . . GAB3 139716 broad.mit.edu 36 X 153561643 153561643 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001081573 exon9 c.C1607T p.A536V . . . MPP1 4354 broad.mit.edu 36 X 153660693 153660693 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002436 exon12 c.C1354A p.Q452K . . . F8 2157 broad.mit.edu 36 X 153741995 153741995 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon25 c.C6806A p.S2269Y . . . F8 2157 broad.mit.edu 36 X 153811868 153811868 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon14 c.A3391G p.T1131A . . . F8 2157 broad.mit.edu 36 X 153812819 153812819 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon14 c.C2440T p.R814X . . . F8 2157 broad.mit.edu 36 X 153868755 153868755 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000132 exon5 c.G621T p.K207N . . . ACE2 59272 broad.mit.edu 36 X 15498353 15498353 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021804 exon15 c.C1882T p.L628F . . . ZRSR2 8233 broad.mit.edu 36 X 15750884 15750884 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005089 exon11 c.T1047C p.S349S . . . GRPR 2925 broad.mit.edu 36 X 16078511 16078511 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005314 exon2 c.C576A p.T192T . . . TXLNG 55787 broad.mit.edu 36 X 16760677 16760677 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_018360 exon6 c.A875C p.K292T . . . RBBP7 5931 broad.mit.edu 36 X 16780621 16780621 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002893 exon8 c.G937A p.E313K . . . RBBP7 5931 broad.mit.edu 36 X 16780858 16780858 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002893 exon7 c.G820A p.E274K . . . REPS2 9185 broad.mit.edu 36 X 16934316 16934316 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004726 exon2 c.T325C p.F109L . . . NHS 4810 broad.mit.edu 36 X 17653649 17653649 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136024 exon7 c.G971A p.R324H . . . NHS 4810 broad.mit.edu 36 X 17654967 17654967 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136024 exon7 c.C2289T p.A763A . . . SCML2 10389 broad.mit.edu 36 X 18186264 18186264 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006089 exon10 c.G1094T p.G365V . . . CDKL5 6792 broad.mit.edu 36 X 18532249 18532249 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003159 exon12 c.C1284T p.G428G . . . CDKL5 6792 broad.mit.edu 36 X 18556538 18556538 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003159 exon18 c.C2623T p.R875W . . . RS1 6247 broad.mit.edu 36 X 18600071 18600071 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000330 exon1 c.C39A p.L13L . . . PPEF1 5475 broad.mit.edu 36 X 18658254 18658254 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152226 exon5 c.C81A p.Y27X . . . PDHA1 5160 broad.mit.edu 36 X 19277379 19277379 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173454 exon3 c.A200C p.N67T . . . PDHA1 5160 broad.mit.edu 36 X 19283399 19283399 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001173454 exon8 c.C729T p.F243F . . . MAP3K15 389840 broad.mit.edu 36 X 19302541 19302541 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001001671 exon20 c.G2748T p.K916N . . . RPS6KA3 6197 broad.mit.edu 36 X 20092952 20092952 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004586 exon18 c.T1750G p.F584V . . . CNKSR2 22866 broad.mit.edu 36 X 21534915 21534915 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014927 exon19 c.C2142A p.P714P . . . CNKSR2 22866 broad.mit.edu 36 X 21537527 21537527 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014927 exon20 c.C2563A p.H855N . . . PHEX 5251 broad.mit.edu 36 X 22005701 22005701 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000444 exon5 c.T623C p.V208A . . . PHEX 5251 broad.mit.edu 36 X 22042545 22042545 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000444 exon11 c.A1222C p.N408H . . . PHEX 5251 broad.mit.edu 36 X 22096425 22096425 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000444 exon13 c.G1480T p.A494S . . . PTCHD1 139411 broad.mit.edu 36 X 23321393 23321393 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173495 exon3 c.T1837C p.L613L . . . PTCHD1 139411 broad.mit.edu 36 X 23321965 23321965 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_173495 exon3 c.C2409A p.L803L . . . CXorf58 254158 broad.mit.edu 36 X 23866646 23866646 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152761 exon8 c.T847G p.F283V . . . ZFX 7543 broad.mit.edu 36 X 24135369 24135369 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001178084 exon4 c.G652A p.D218N . . . ZBED1 9189 broad.mit.edu 36 X 2416844 2416844 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004729 exon2 c.G1917A p.A639A . . . Unknown 0 broad.mit.edu 36 X 24240271 24240271 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136233 exon1 c.G1083A p.P361P . . . Unknown 0 broad.mit.edu 36 X 24291868 24291868 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001136234 exon1 c.C1070T p.S357L . . . PCYT1B 9468 broad.mit.edu 36 X 24490338 24490338 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001163264 exon8 c.A1049G p.E350G . . . POLA1 5422 broad.mit.edu 36 X 24643205 24643205 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016937 exon6 c.T471C p.G157G . . . POLA1 5422 broad.mit.edu 36 X 24669445 24669445 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016937 exon21 c.A2231G p.H744R . . . XG 7499 broad.mit.edu 36 X 2698596 2698596 + Silent SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001141919 exon2 c.A67C p.R23R . . . MAGEB3 4114 broad.mit.edu 36 X 30164650 30164650 + Missense_Mutation SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002365 exon5 c.A688G p.M230V . . . NR0B1 190 broad.mit.edu 36 X 30232748 30232748 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000475 exon2 c.G1282A p.E428K . . . ARSF 416 broad.mit.edu 36 X 3040225 3040225 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004042 exon11 c.T1401G p.V467V . . . GK 2710 broad.mit.edu 36 X 30648680 30648680 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001128127 exon16 c.G1240T p.D414Y . . . DMD 1756 broad.mit.edu 36 X 31406301 31406301 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004009 exon59 c.G8768T p.R2923I . . . DMD 1756 broad.mit.edu 36 X 31424900 31424900 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004009 exon57 c.G8461A p.D2821N . . . DMD 1756 broad.mit.edu 36 X 32308673 32308673 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004009 exon34 c.C4708T p.R1570C . . . MXRA5 25878 broad.mit.edu 36 X 3237963 3237963 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon7 c.C8281T p.P2761S . . . MXRA5 25878 broad.mit.edu 36 X 3239424 3239424 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon7 c.G6820A p.E2274K . . . MXRA5 25878 broad.mit.edu 36 X 3250192 3250192 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon5 c.G3534T p.E1178D . . . MXRA5 25878 broad.mit.edu 36 X 3250874 3250874 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_015419 exon5 c.C2852T p.S951L . . . DMD 1756 broad.mit.edu 36 X 32627297 32627297 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004009 exon8 c.C672A p.I224I . . . FAM47A 158724 broad.mit.edu 36 X 34058783 34058783 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203408 exon1 c.C1534T p.R512C . . . FAM47A 158724 broad.mit.edu 36 X 34058822 34058822 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203408 exon1 c.C1495T p.R499C . . . FAM47A 158724 broad.mit.edu 36 X 34059281 34059281 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_203408 exon1 c.C1036T p.R346W . . . TMEM47 83604 broad.mit.edu 36 X 34567352 34567352 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031442 exon2 c.G300T p.L100F . . . FAM47C 442444 broad.mit.edu 36 X 36938148 36938148 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013736 exon1 c.C1744A p.L582I . . . BCOR 54880 broad.mit.edu 36 X 39799667 39799667 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017745 exon12 c.C4537T p.R1513X . . . BCOR 54880 broad.mit.edu 36 X 39817344 39817344 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017745 exon4 c.G2199A p.T733T . . . ATP6AP2 10159 broad.mit.edu 36 X 40349940 40349940 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005765 exon9 c.C1042T p.R348X . . . USP9X 8239 broad.mit.edu 36 X 40960503 40960503 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039590 exon35 c.C5739T p.D1913D . . . DDX3X 1654 broad.mit.edu 36 X 41086719 41086719 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001356 exon5 c.C312T p.Y104Y . . . DDX3X 1654 broad.mit.edu 36 X 41091105 41091105 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001356 exon15 c.T1665G p.D555E . . . GPR34 2857 broad.mit.edu 36 X 41440864 41440864 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001097579 exon3 c.G1034A p.R345Q . . . KDM6A 7403 broad.mit.edu 36 X 44807902 44807902 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021140 exon16 c.G1819A p.V607M . . . SLC9A7 84679 broad.mit.edu 36 X 46426786 46426786 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032591 exon2 c.G454A p.E152K . . . RP2 6102 broad.mit.edu 36 X 46598053 46598053 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006915 exon2 c.T301C p.F101L . . . ZNF157 7712 broad.mit.edu 36 X 47157129 47157129 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_003446 exon4 c.G713T p.R238I . . . ZNF41 7592 broad.mit.edu 36 X 47193673 47193673 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_153380 exon5 c.G440A p.R147H . . . ZNF182 7569 broad.mit.edu 36 X 47720661 47720661 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006962 exon7 c.G1769T p.R590I . . . ZNF182 7569 broad.mit.edu 36 X 47721582 47721582 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006962 exon7 c.C848A p.T283N . . . GATA1 2623 broad.mit.edu 36 X 48535798 48535798 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_002049 exon4 c.C723A p.L241L . . . HDAC6 10013 broad.mit.edu 36 X 48567532 48567532 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006044 exon28 c.C3463T p.R1155C . . . PIM2 11040 broad.mit.edu 36 X 48657255 48657255 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_006875 exon4 c.A581C p.Y194S . . . KCND1 3750 broad.mit.edu 36 X 48710661 48710661 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004979 exon1 c.G962A p.S321N . . . CACNA1F 778 broad.mit.edu 36 X 48956160 48956160 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_005183 exon33 c.C3886T p.R1296C . . . CLCN5 1184 broad.mit.edu 36 X 49737877 49737877 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001127898 exon11 c.C1167T p.L389L . . . CCNB3 85417 broad.mit.edu 36 X 50070613 50070613 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_033031 exon5 c.C2704A p.P902T . . . HUWE1 10075 broad.mit.edu 36 X 53612444 53612444 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_031407 exon49 c.C6640T p.R2214W . . . FAM120C 54954 broad.mit.edu 36 X 54202772 54202772 + Silent SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017848 exon2 c.C702A p.V234V . . . GNL3L 54552 broad.mit.edu 36 X 54603722 54603722 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_019067 exon16 c.G1711A p.D571N . . . ITIH5L 347365 broad.mit.edu 36 X 54800617 54800617 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_198510 exon8 c.C2615T p.S872F . . . MAGED2 10916 broad.mit.edu 36 X 54852527 54852527 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_201222 exon2 c.G38A p.R13H . . . TRO 7216 broad.mit.edu 36 X 54971840 54971840 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016157 exon12 c.C1958A p.A653D . . . TRO 7216 broad.mit.edu 36 X 54973662 54973662 + Silent SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001039705 exon12 c.T3780G p.G1260G . . . RRAGB 10325 broad.mit.edu 36 X 55799029 55799029 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_016656 exon9 c.C850T p.R284C . . . SPIN3 169981 broad.mit.edu 36 X 57037432 57037432 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010862 exon2 c.C674T p.T225I . . . SPIN3 169981 broad.mit.edu 36 X 57038069 57038069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001010862 exon2 c.C37T p.R13W . . . ZXDA 7789 broad.mit.edu 36 X 57951220 57951220 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007156 exon1 c.G2360T p.R787I . . . ZXDA 7789 broad.mit.edu 36 X 57952050 57952050 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_007156 exon1 c.C1530T p.F510F . . . NLGN4X 57502 broad.mit.edu 36 X 5831528 5831528 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_181332 exon5 c.C1191A p.F397L . . . FAM123B 139285 broad.mit.edu 36 X 63328487 63328487 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_152424 exon2 c.G1405T p.E469X . . . STARD8 9754 broad.mit.edu 36 X 67851867 67851867 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001142503 exon4 c.C158T p.S53L . . . EFNB1 1947 broad.mit.edu 36 X 67976603 67976603 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_004429 exon4 c.C575T p.A192V . . . KIF4A 24137 broad.mit.edu 36 X 69480288 69480288 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_012310 exon12 c.C1277T p.A426V . . . GDPD2 54857 broad.mit.edu 36 X 69568971 69568971 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_017711 exon13 c.C1397T p.S466L . . . MED12 9968 broad.mit.edu 36 X 70274138 70274138 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005120 exon40 c.T5754C p.S1918S . . . NLGN3 54413 broad.mit.edu 36 X 70291832 70291832 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166660 exon3 c.C501T p.H167H . . . NLGN3 54413 broad.mit.edu 36 X 70304081 70304081 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001166660 exon5 c.G1289A p.R430H . . . NONO 4841 broad.mit.edu 36 X 70430937 70430937 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001145408 exon6 c.G484A p.E162K . . . TAF1 6872 broad.mit.edu 36 X 70594934 70594934 + Missense_Mutation SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_138923 exon35 c.T5054G p.V1685G . . . RGAG4 340526 broad.mit.edu 36 X 71266485 71266485 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001024455 exon1 c.G1631A p.R544Q . . . NHSL2 340527 broad.mit.edu 36 X 71276562 71276562 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001013627 exon6 c.T2439C p.T813T . . . KIAA2022 340533 broad.mit.edu 36 X 73880774 73880774 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001008537 exon3 c.C343T p.P115S . . . UPRT 139596 broad.mit.edu 36 X 74430064 74430064 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_145052 exon2 c.C419T p.A140V . . . UPRT 139596 broad.mit.edu 36 X 74432947 74432947 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145052 exon3 c.G475T p.E159X . . . ZDHHC15 158866 broad.mit.edu 36 X 74565722 74565722 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001146256 exon6 c.C492A p.F164L . . . POU3F4 5456 broad.mit.edu 36 X 82650348 82650348 + Silent SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000307 exon1 c.G360A p.P120P . . . POU3F4 5456 broad.mit.edu 36 X 82650487 82650487 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000307 exon1 c.C499T p.R167X . . . CYLC1 1538 broad.mit.edu 36 X 83014935 83014935 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_021118 exon4 c.C563A p.S188Y . . . RPS6KA6 27330 broad.mit.edu 36 X 83248701 83248701 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_014496 exon14 c.C1115A p.S372Y . . . HDX 139324 broad.mit.edu 36 X 83475439 83475439 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001177479 exon9 c.C1808A p.S603Y . . . KAL1 3730 broad.mit.edu 36 X 8525162 8525162 + Missense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_000216 exon4 c.G454A p.E152K . . . DACH2 117154 broad.mit.edu 36 X 85836706 85836706 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_053281 exon5 c.G799T p.D267Y . . . KLHL4 56062 broad.mit.edu 36 X 86773996 86773996 + Silent SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057162 exon7 c.C1455T p.D485D . . . KLHL4 56062 broad.mit.edu 36 X 86775424 86775424 + Silent SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057162 exon8 c.A1569G p.G523G . . . KLHL4 56062 broad.mit.edu 36 X 86777338 86777338 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_057162 exon9 c.G1832T p.G611V . . . CPXCR1 53336 broad.mit.edu 36 X 87895105 87895105 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184771 exon3 c.G34A p.A12T . . . CPXCR1 53336 broad.mit.edu 36 X 87895367 87895367 + Missense_Mutation SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001184771 exon3 c.A296C p.K99T . . . PABPC5 140886 broad.mit.edu 36 X 90578247 90578247 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_080832 exon2 c.C1015T p.Q339X . . . PCDH11X 27328 broad.mit.edu 36 X 91019563 91019563 + Silent SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon2 c.C1668A p.V556V . . . PCDH11X 27328 broad.mit.edu 36 X 91019749 91019749 + Silent SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon2 c.T1854C p.I618I . . . PCDH11X 27328 broad.mit.edu 36 X 91020792 91020792 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon2 c.T2897C p.L966P . . . PCDH11X 27328 broad.mit.edu 36 X 91760516 91760516 + Missense_Mutation SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_032968 exon7 c.C3965A p.P1322H . . . FAM133A 286499 broad.mit.edu 36 X 92851301 92851301 + Missense_Mutation SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq NM_001171110 exon5 c.G227A p.S76N . . . NXF5 55998 broad.mit.edu 36 X 100978368 100978368 + Missense_Mutation SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 106730183 106730183 + IGR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 106924110 106924110 + IGR SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . GUCY2F 2986 broad.mit.edu 36 X 108512000 108512000 + Intron SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T C T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . UPF3B 65109 broad.mit.edu 36 X 118859257 118859257 + Intron SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FRMPD4 9758 broad.mit.edu 36 X 12602958 12602958 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EGFL6 25975 broad.mit.edu 36 X 13547285 13547285 + Splice_Site SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . FGF13 2258 broad.mit.edu 36 X 137612801 137612801 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 146126140 146126140 + IGR SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C T C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . AFF2 2334 broad.mit.edu 36 X 147732590 147732590 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ATP2B3 492 broad.mit.edu 36 X 152498962 152498962 + 3'UTR SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C C A C C Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . CNKSR2 22866 broad.mit.edu 36 X 21398793 21398793 + Intron SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . CNKSR2 22866 broad.mit.edu 36 X 21534813 21534813 + Intron SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 26089014 26089014 + IGR SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . DMD 1756 broad.mit.edu 36 X 31134613 31134613 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 47543086 47543086 + IGR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 47547968 47547968 + IGR SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T T G T T Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SSX6 280657 broad.mit.edu 36 X 47863909 47863909 + Missense_Mutation SNP G T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G T G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . SMC1A 8243 broad.mit.edu 36 X 53457122 53457122 + Intron SNP C T T novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ZC4H2 55906 broad.mit.edu 36 X 64058418 64058418 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . EDA 1896 broad.mit.edu 36 X 68757465 68757465 + Intron SNP G A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 G G G A G G Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TEX11 56159 broad.mit.edu 36 X 69806941 69806941 + Intron SNP A C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A C A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . . TSIX 9383 broad.mit.edu 36 X 72959486 72959486 + RNA SNP T C C novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . XIST 7503 broad.mit.edu 36 X 72978239 72978239 + RNA SNP T G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . XIST 7503 broad.mit.edu 36 X 72980960 72980960 + RNA SNP C A A novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . XIST 7503 broad.mit.edu 36 X 72983088 72983088 + RNA SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . XIST 7503 broad.mit.edu 36 X 72984441 72984441 + RNA SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . Unknown 0 broad.mit.edu 36 X 73423690 73423690 + IGR SNP A G G novel unknown TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 A A A G A A Unknown Valid Somatic Phase_I Capture Illumina Illumina HiSeq . . . . . . .