Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL NTotCov_SOL NVarCov_SOL dbSNPPopFreq COSMIC_Gene_Freq ANKRD17 26057 hgsc.bcm.edu 37 4 73943167 73943167 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c ANKRD17,NS,carcinoma,0,1 ANKRD17 NM_032217 exon32 c.C7492A p.Q2498K TTGCTTGATGTTG . 46 2 45 0 . 0 NONO 4841 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 70516449 70516449 + Nonsense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001145408 exon7 c.C685T p.Q229X ATGGACCAGTTAG . 26 11 31 0 . . MAML3 55534 hgsc.bcm.edu 37 4 140811971 140811971 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c MAML3_ENST00000509479,NS,carcinoma,0,2 MAML3_ENST00000509479 NM_018717 exon2 c.C619T p.P207S TACTGGGCAAATT . 61 3 54 0 . 0 DENND2A 27147 hgsc.bcm.edu 37 7 140246698 140246698 + Silent SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c DENND2A,right_upper_lobe,carcinoma,0,1 DENND2A NM_015689 exon11 c.C2079A p.A693A AACCAGGGCAGGA . 26 2 33 0 . 0 HPSE2 60495 hgsc.bcm.edu 37 10 100481428 100481428 + Silent SNP G G A rs142810016 alternate_allele TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c HPSE2_ENST00000370546,NS,carcinoma,0,1 HPSE2_ENST00000370546 NM_001166246 exon5 c.C942T p.I314I GAGGGCGATGACA . 57 4 78 0 . 0 SLC32A1 140679 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 37353459 37353459 + Missense_Mutation SNP T T A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c SLC32A1,lower_third,carcinoma,0,1 SLC32A1 NM_080552 exon1 c.T92A p.M31K CCAGGATGGGTTT . 29 5 29 0 . 0 ABL2 27 hgsc.bcm.edu;ucsc.edu 37 1 179077425 179077425 + Silent SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_007314 exon12 c.C2977T p.L993L GCTGCAGTAGTCT . 32 4 19 0 . . DENND4B 9909 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 153907309 153907309 + Silent SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c DENND4B_ENST00000361217,NS,carcinoma,0,6 DENND4B_ENST00000361217 NM_014856 exon18 c.G2700A p.Q900Q CTGTTGCTGCTGC . 24 4 19 0 . 0 TEX15 56154 hgsc.bcm.edu 37 8 30690813 30690813 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_031271 exon4 c.C8359A p.P2787T GTCCTGGATGAAA . 72 3 130 0 . . SLC7A2 6542 hgsc.bcm.edu 37 8 17401015 17401015 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c SLC7A2,NS,carcinoma,0,1 SLC7A2 NM_001164771 exon2 c.C287T p.A96V TCCTCGCTGGGGA . 31 2 49 0 . 0 ZYX 7791 hgsc.bcm.edu;broad.mit.edu 37 7 143079401 143079401 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_003461 exon3 c.G269A p.G90E CTCTGGGAGGTGC . 26 4 35 0 . . CNDP1 84735 hgsc.bcm.edu 37 18 72251796 72251796 + Missense_Mutation SNP T T A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CNDP1,NS,carcinoma,0,1 CNDP1 NM_032649 exon12 c.T1522A p.X508K CTCCATTAATCAC . 30 2 27 0 . 0 DARS 1615 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 136664945 136664945 + Silent SNP A A G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001349 exon16 c.T1447C p.L483L TATGCAATCCCAG . 64 16 70 0 . . GAS7 8522 hgsc.bcm.edu 37 17 9862568 9862568 + Missense_Mutation SNP A A G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c GAS7,NS,carcinoma,0,1 GAS7 NM_201433 exon5 c.T476C p.L159P GATCCCAGGTTCT . 35 2 41 0 . 0 CYP4A22 284541 hgsc.bcm.edu 37 1 47608985 47608985 + Silent SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CYP4A22,colon,carcinoma,0,1 CYP4A22 NM_001010969 exon5 c.C555A p.V185V GGAGGTCTTTCAG . 38 2 53 0 . 0 DDHD1 80821 hgsc.bcm.edu 37 14 53619480 53619480 + Missense_Mutation SNP T T C rs200797826 bycluster TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c .,102 . NM_001160147 exon1 c.A337G p.S113G AGGAGCTGCCGCC . 10 0 11 2 . 202 ZNF547 284306 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 57888623 57888623 + Silent SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_173631 exon4 c.C279T p.S93S ATGTAGCTCACTT . 24 7 22 0 . . RNR2 6053 hgsc.bcm.edu;broad.mit.edu 37 MT 2449 2449 + RNA SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . CATAAGGAAAGGT . 586 161 176 0 . . CYP11B1 1584 hgsc.bcm.edu 37 8 143957206 143957206 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CYP11B1,NS,carcinoma,0,1 CYP11B1 NM_000497 exon6 c.C1043A p.A348E CTGGCTGCGGCGG . 33 2 53 0 . 0 SPHKAP 80309 hgsc.bcm.edu 37 2 228996762 228996762 + Silent SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c SPHKAP_ENST00000392056,NS,carcinoma,0,2 SPHKAP_ENST00000392056 NM_030623 exon2 c.G72A p.P24P CTGCTGCGGTTCC . 41 2 46 0 . 0 DAB1 1600 hgsc.bcm.edu 37 1 57480714 57480714 + Missense_Mutation SNP C C T rs144347021 TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c DAB1,colon,carcinoma,0,3 DAB1 NM_021080 exon14 c.G1286A p.R429H GGTTTGCGGGAGG . 39 3 26 0 0.000 0 PTPRG 5793 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 62268423 62268423 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_002841 exon28 c.C3934T p.R1312W GAAGTTCGGCACT . 53 8 64 0 . . TRUB1 142940 hgsc.bcm.edu 37 10 116702491 116702491 + Missense_Mutation SNP G G T rs143607039 alternate_allele TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c TRUB1,bladder,carcinoma,0,3 TRUB1 NM_139169 exon2 c.G374T p.R125L CAGCCCGAGGAGT . 38 2 49 0 . 0 CNTNAP5 129684 hgsc.bcm.edu 37 2 125175026 125175026 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CNTNAP5,right_upper_lobe,carcinoma,0,1 CNTNAP5 NM_130773 exon4 c.G388T p.A130S ACCTTTGCAGGAA . 28 2 36 0 . 0 DNAH5 1767 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 13919410 13919410 + Nonsense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c DNAH5,NS,carcinoma,0,1 DNAH5 NM_001369 exon7 c.C850T p.R284X CCGCTCGTGGCCC . 14 6 37 0 . 0 CST1 1469 hgsc.bcm.edu;ucsc.edu 37 20 23728528 23728528 + Silent SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CST1,NS,carcinoma,0,2 CST1 NM_001898 exon3 c.G351A p.L117L AGAGCACAACTGT . 32 4 63 1 . 0 RPSAP58 388524 hgsc.bcm.edu 37 19 24010294 24010294 + RNA SNP C C G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c RPSAP58_ENST00000496398,NS,carcinoma,0,40 RPSAP58_ENST00000496398 . . . . ACTAACCAGATCC . 30 2 34 0 . 0 MFAP5 8076 hgsc.bcm.edu 37 12 8814663 8814663 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c MFAP5,NS,adenoma,0,1 MFAP5 NM_003480 exon2 c.C38A p.A13D AATGCAGCAAGAA . 31 2 33 0 . 0 IFNGR1 3459 hgsc.bcm.edu 37 6 137525607 137525607 + Missense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c IFNGR1,NS,carcinoma,0,1 IFNGR1 NM_000416 exon4 c.G408T p.K136N CTCCTCCTTTCTG . 39 3 42 0 . 0 CACNA1E 777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 181701852 181701852 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001205293 exon20 c.G2630A p.G877D CCCTGGGCCAGCG . 62 20 39 0 . . FZD1 8321 hgsc.bcm.edu 37 7 90896134 90896134 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c FZD1,bladder,carcinoma,-2,1 FZD1 NM_003505 exon1 c.G1939T p.V647F ACTACAGTCTGAG . 37 2 56 0 . -2 MPDZ 8777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 13168539 13168539 + Missense_Mutation SNP T T C rs372981122 alternate_allele TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_003829 exon22 c.A3080G p.D1027G AAGCCATCTTTAT . 54 11 50 0 . . CYP46A1 10858 hgsc.bcm.edu 37 14 100158142 100158142 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CYP46A1,NS,carcinoma,0,1 CYP46A1 NM_006668 exon3 c.C226T p.R76W GTTGTGCGGGTCA . 51 3 63 0 . 0 PIGS 94005 hgsc.bcm.edu 37 17 26898495 26898495 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_033198 exon1 c.C20T p.A7V GTAGCCGCAGCCC . 89 4 73 0 . . MYH15 22989 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 108147371 108147371 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_014981 exon28 c.C3730A p.L1244M GGGTCAGGAGGTC . 42 4 44 0 . . ABCA6 23460 hgsc.bcm.edu;bcgsc.ca 37 17 67080420 67080420 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_080284 exon34 c.C4337T p.T1446I TGCCCTGTGGGGT . 26 4 34 0 . . C11orf52 91894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 111796803 111796803 + Nonsense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_080659 exon4 c.C252A p.C84X AGTGTGCAGCCGT . 25 5 25 0 . . C6orf70 55780 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 170179308 170179308 + Silent SNP G G C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c C6orf70,NS,carcinoma,0,1 C6orf70 NM_018341 exon17 c.G1770C p.L590L CAGCCTGATACTG . 19 5 40 0 . 0 JMJD7 100137047 hgsc.bcm.edu 37 15 42129066 42129066 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c JMJD7-PLA2G4B_ENST00000542534,NS,carcinoma,0,2 JMJD7-PLA2G4B_ENST00000542534 NM_001114632 exon7 c.C790T p.R264W ACGGTGCGGGCCG . 40 2 44 0 . 0 DNAAF2 55172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 50092315 50092315 + Missense_Mutation SNP T T G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_018139 exon3 c.A2459C p.H820P GTCACATGATCTT . 84 14 77 0 . . ZNF415 55786 hgsc.bcm.edu 37 19 53612346 53612346 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c ZNF415,NS,carcinoma,0,1 ZNF415 NM_018355 exon4 c.C952A p.H318N TCTGATGTAGTGC . 37 2 36 0 . 0 CDH20 28316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 18 59174732 59174732 + Missense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_031891 exon5 c.C956A p.A319E ATGGTGCAGATGC . 37 9 39 0 . . PCDHA5 56143 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 140202795 140202795 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_018908 exon1 c.C1435T p.R479W TCTGCACGGGACG . 90 17 99 0 . . URB2 9816 hgsc.bcm.edu 37 1 229779333 229779333 + Silent SNP T T C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c URB2,colon,carcinoma,0,1 URB2 NM_014777 exon5 c.T3688C p.L1230L GGAGCCTTGTTCA . 39 2 41 0 . 0 SMG6 23293 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 1972077 1972077 + Missense_Mutation SNP A A C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_017575 exon16 c.T3830G p.L1277R CCGATGAGGGGCA . 22 6 17 0 . . USP9X 8239 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 41043819 41043819 + Missense_Mutation SNP A A G rs377036436 TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001039591 exon23 c.A3449G p.N1150S ACCTCAATGCTCT . 34 10 28 0 . . MFSD1 64747 hgsc.bcm.edu 37 3 158538046 158538046 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_022736 exon9 c.C941T p.P314L CCTTACCCCTGTG . 78 3 89 0 . . CLIP4 79745 hgsc.bcm.edu;bcgsc.ca 37 2 29397281 29397281 + Missense_Mutation SNP A A G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_024692 exon15 c.A1766G p.K589R CCCAAAAGGAGAT . 90 4 102 0 . . FAM111B 374393 hgsc.bcm.edu 37 11 58891964 58891964 + Missense_Mutation SNP T T A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c .,2 . NM_198947 exon4 c.T394A p.Y132N ATTGTTTATGAAG . 48 2 45 1 . 84 STK31 56164 hgsc.bcm.edu 37 7 23826512 23826512 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c STK31,NS,carcinoma,0,1 STK31 NM_031414 exon20 c.C2456T p.A819V TGAATGCTGTTCA . 49 2 57 0 . 0 CCT8L2 150160 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 22 17072592 17072592 + Silent SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_014406 exon1 c.C849A p.G283G TAGCTGGCCTACT . 30 7 42 0 . . PI15 51050 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 75737614 75737614 + Missense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_015886 exon2 c.C130A p.L44M GCAGCTCTGAAAG . 31 8 38 0 . . CDH13 1012 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 83520260 83520260 + Silent SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001220488 exon8 c.G1101A p.E367E CCGAGAGGTGAGC . 25 7 22 0 . . GLTSCR1 29998 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 48198732 48198732 + Splice_Site SNP G G C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_015711 exon10 c.3186+1G>C . CTGCAGGTAAGGG . 59 22 37 0 . . CTR9 9646 hgsc.bcm.edu 37 11 10794117 10794117 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CTR9,NS,carcinoma,0,1 CTR9 NM_014633 exon20 c.G2495T p.R832L GGGCACGCAAACA . 37 2 52 0 . 0 CMA1 1215 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 24974805 24974805 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001836 exon5 c.C661T p.R221W CCGACCGTCCATA . 29 7 23 0 . . ZC3H6 376940 hgsc.bcm.edu;bcgsc.ca 37 2 113069514 113069514 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_198581 exon5 c.G747T p.E249D TCAAGAGGTACTA . 81 4 75 0 . . DLX5 1749 hgsc.bcm.edu 37 7 96653802 96653802 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c DLX5,colon,carcinoma,0,1 DLX5 NM_005221 exon1 c.C134A p.S45Y TAGTCAGAATCGG . 43 2 56 0 . 0 SSPO 23145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 149473162 149473162 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_198455 exon1 c.C32T p.A11V GGATGGCGTGGGC . 26 4 31 0 . . SMARCC1 6599 hgsc.bcm.edu 37 3 47702803 47702803 + Silent SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c SMARCC1,mouth,carcinoma,0,1 SMARCC1 NM_003074 exon21 c.C2301A p.P767P CTCATCGGGCCCT . 25 2 30 0 . 0 NUP50 10762 hgsc.bcm.edu 37 22 45574136 45574136 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_007172 exon5 c.G358T p.G120C GCAAATGGCCCTA . 72 4 110 0 . . CACNA1F 778 hgsc.bcm.edu;broad.mit.edu 37 X 49079211 49079211 + Nonsense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_005183 exon16 c.C2205A p.C735X ATAGATGCACACC . 9 6 7 0 . . PLCL2 23228 hgsc.bcm.edu 37 3 17084422 17084422 + Silent SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_015184 exon4 c.C2697T p.I899I AAAGATCGTACAT . 69 3 77 0 . . KIAA1407 57577 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 113724730 113724730 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_020817 exon10 c.C1493A p.T498K GTTGTTGTTCTTC . 17 4 8 0 . . STAB1 23166 hgsc.bcm.edu;ucsc.edu 37 3 52536050 52536050 + Nonsense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_015136 exon4 c.C360A p.C120X CCCATGCAATGGC . 20 4 37 0 . . OR4M1 441670 hgsc.bcm.edu 37 14 20248958 20248958 + Missense_Mutation SNP G G T rs373976062 alternate_allele TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c OR4M1,NS,carcinoma,0,1 OR4M1 NM_001005500 exon1 c.G477T p.Q159H AATACAGGTGGCT . 60 3 95 0 . 0 SOX6 55553 hgsc.bcm.edu 37 11 16208345 16208345 + Missense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c SOX6_ENST00000527619,NS,malignant_melanoma,0,2 SOX6_ENST00000527619 NM_001145819 exon5 c.G731T p.R244L TGTTGGCGAGCAA . 29 2 31 0 . 0 C1orf173 127254 hgsc.bcm.edu 37 1 75039126 75039126 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c C1orf173,right_upper_lobe,carcinoma,0,1 C1orf173 NM_001002912 exon14 c.C2268A p.N756K TTCCTTGTTTGAG . 21 2 38 0 . 0 CDC27 996 hgsc.bcm.edu 37 17 45214623 45214623 + Missense_Mutation SNP G G A rs75637741 bycluster TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c CDC27_ENST00000531206,rectum,carcinoma,0,2 CDC27_ENST00000531206 NM_001114091 exon14 c.C1826T p.A609V GTATAGGCATAAG . 88 8 71 2 . 0 TENM2 57451 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 167674541 167674541 + Silent SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001122679 exon27 c.G6570A p.T2190T TACCACGAAGTAC . 31 8 34 0 . . TENM1 10178 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 123839042 123839042 + Missense_Mutation SNP T T C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . NM_001163278 exon5 c.A836G p.N279S GGGTAGTTCTGAC . 31 10 25 0 . . OR1C1 26188 hgsc.bcm.edu 37 1 247920861 247920861 + Missense_Mutation SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c OR1C1,brain,primitive_neuroectodermal_tumour-medulloblastoma,0,1 OR1C1 NM_012353 exon1 c.C848T p.P283L AGCATCGGAGCCA . 21 3 38 0 . 0 . 0 broad.mit.edu 37 1 142727005 142727005 + RNA DEL T T - novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . CATATATTTTATA . 343 48 414 0 . . DSCAML1 57453 broad.mit.edu;ucsc.edu 37 11 117375684 117375684 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . DSCAML1 NM_020693 exon10 c.G2317A p.V773M CGTCCACCGAGCA . 22 5 15 0 . 286 ATN1 1822 broad.mit.edu 37 12 7045653 7045653 + Missense_Mutation SNP A A C novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . ATN1 NM_001007026 exon5 c.A1223C p.Y408S CCAGCTACCCCCA . 38 7 45 2 . 95 CHEK2P2 0 broad.mit.edu 37 15 20488770 20488770 + RNA SNP A A G rs74751600 TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . CACTCCAAGATTT . 159 4 213 2 . . PKD1L2 114780 broad.mit.edu 37 16 81198502 81198502 + RNA DEL C C - novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . PKD1L2 . . . . TTGATTCCCATAG . 6 2 5 0 . 361 LOC541471 0 broad.mit.edu 37 2 112252464 112252464 + RNA SNP G G A rs1128295 bycluster TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . TCACCAGGGAGAG . 54 3 70 1 G|0.500;A|0.500 . OTOF 9381 broad.mit.edu 37 2 26693554 26693556 + In_Frame_Del DEL CTT CTT - novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . OTOF NM_194248 exon32 c.3928_3930del p.1310_1310del AGTGCCCTTCTTC . 6 2 5 0 . 524 SLC5A1 6523 broad.mit.edu 37 22 32500775 32500775 + Silent SNP C C G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . SLC5A1 NM_000343 exon14 c.C1668G p.L556L GCAGCTCTACCGT . 27 5 20 0 . 80 BOC 91653 broad.mit.edu 37 3 113002290 113002290 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . BOC NM_033254 exon16 c.C2464T p.P822S CGACTGCCACCCC . 28 3 39 0 . 139 . 0 broad.mit.edu;bcgsc.ca 37 3 159818606 159818606 + RNA SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . GCCTGGCGCGGGG . 30 10 36 0 . . SEMA6A 57556 broad.mit.edu;bcgsc.ca 37 5 115782915 115782915 + Silent SNP G G A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . SEMA6A NM_020796 exon19 c.C2487T p.Y829Y GTCCACGTACTCA . 19 3 22 0 . 93 . 0 broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 142020924 142020924 + RNA SNP C C G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . GTGCTGCTTTGTC . 25 5 25 0 . . CD72 971 broad.mit.edu;bcgsc.ca 37 9 35615948 35615948 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 Untested Somatic Phase_I WXS none Illumina GAIIx f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . CD72 NM_001782 exon5 c.G680A p.G227D GCTGAGCCGCATG . 13 3 19 0 . 20 ID3 3399 ucsc.edu;bcgsc.ca 37 1 23885891 23885891 + Silent SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G Unknown Untested Somatic WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . ID3 NM_002167 exon1 c.C27A p.G9G GTAGCAGCCGCGC . 27 4 40 0 . 29 PLCXD3 345557 ucsc.edu;bcgsc.ca 37 5 41510580 41510580 + Missense_Mutation SNP C C T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C Unknown Untested Somatic WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . PLCXD3 NM_001005473 exon1 c.G49A p.A17T GAGTTGCCATCCA . 24 4 29 0 . 86 NAV2 89797 ucsc.edu 37 11 19970265 19970265 + Missense_Mutation SNP G G T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G G Unknown Untested Somatic WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . NAV2 NM_001244963 exon11 c.G2353T p.V785F ACCAATGTCACCA . 39 4 46 0 . 255 SLC38A6 145389 ucsc.edu;bcgsc.ca 37 14 61504396 61504396 + Missense_Mutation SNP C C A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C C Unknown Untested Somatic WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . SLC38A6 NM_153811 exon8 c.C619A p.L207I TTTGCTCTTGTGG . 34 4 53 0 . 87 . 0 bcgsc.ca 37 2 27789781 27789781 + Missense_Mutation SNP T G G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 T - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . CTCATCTTCCTGT . 19 7 28 0 . . . 440915 bcgsc.ca 37 2 132369152 132369152 + RNA SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . ACTCATGTGGGAT . 145 5 195 0 . . ECM2 1842 bcgsc.ca 37 9 95264897 95264897 + Missense_Mutation SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . ECM2 NM_001393 exon8 c.C1502A p.T501N ATTTCAGTTATTT . 33 3 39 0 . 147 KIAA1958 158405 bcgsc.ca 37 9 115337025 115337025 + Missense_Mutation SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . KIAA1958 NM_133465 exon2 c.G665T p.G222V CAGGAGGAGTAGA . 14 3 22 0 . 52 TPP1 1200 bcgsc.ca 37 11 6638859 6638859 + Silent SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . TPP1 NM_000391 exon4 c.C378A p.I126I TCACCGGATGCTC . 13 3 18 0 . 71 . 81136 bcgsc.ca 37 13 68476737 68476737 + RNA SNP C A A novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . TGACTGCGATGGC . 52 17 75 0 . . TSHZ2 128553 bcgsc.ca 37 20 51872335 51872335 + Missense_Mutation SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c TSHZ2,NS,carcinoma,-1,1 TSHZ2 NM_173485 exon2 c.G2338T p.A780S TCGCAAGCACAAT . 20 3 28 0 . 209 TTC3 7267 bcgsc.ca 37 21 38470262 38470262 + Missense_Mutation SNP G T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 G - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . TTC3 . . . . TAAAAAGAAGAAA . 24 4 32 0 . 182 LOC388849 0 bcgsc.ca 37 22 20137749 20137749 + Missense_Mutation SNP C T T novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 C - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . . . . . . GCTGCTCCCGAAG . 44 7 44 0 . . MAGED1 9500 bcgsc.ca 37 X 51640347 51640347 + Missense_Mutation SNP A G G novel TCGA-W5-AA33-01A-11D-A417-09 TCGA-W5-AA33-10A-01D-A41A-09 A - - - - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq f23b3d0d-26a5-4adf-8aec-4994d094465b 02e2d8b9-8b5a-4bae-8615-76c46d68f44c . MAGED1 NM_001005333 exon6 c.A1634G p.K545R ACACAAAGGTGCC . 22 3 33 0 . 84