Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
CREB3L4	148327	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	153946097	153946099	+	In_Frame_Del	DEL	TTC	TTC	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	TTC	TTC	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001255979	exon9	c.898_900del	p.300_300del	CCCAGATTCTTCT	.	35	11	29	0	.	.
MAOB	4129	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	43652720	43652720	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_000898	exon8	c.G874A	p.G292S	CTGAACCCAAAGG	.	56	13	90	0	.	.
SHROOM4	57477	hgsc.bcm.edu	37	X	50350734	50350734	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_020717	exon6	c.G3408A	p.E1136E	TTCCTCCTCCTCC	.	11	4	18	0	.	.
OTOP1	133060	hgsc.bcm.edu	37	4	4228425	4228425	+	Missense_Mutation	SNP	T	T	C	rs78657691	bycluster	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	OTOP1,caecum,carcinoma,0,1	OTOP1	NM_177998	exon1	c.A167G	p.K56R	GCCAGTTTCTGTG	.	8	2	7	2	.	0
FAT3	120114	hgsc.bcm.edu	37	11	92087946	92087946	+	Missense_Mutation	SNP	G	G	T	rs374699170	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	FAT3_ENST00000409404,NS,carcinoma,0,2	FAT3_ENST00000409404	NM_001008781	exon1	c.G2668T	p.D890Y	GTAGCCGACCAGT	.	26	2	39	0	.	0
FNBP4	23360	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	11	47744682	47744682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_015308	exon15	c.C2651A	p.T884N	GGAGCAGTCACTC	.	33	4	42	0	.	.
DIAPH3	81624	hgsc.bcm.edu;bcgsc.ca	37	13	60498918	60498918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001042517	exon18	c.C2161A	p.Q721K	GGTTCTGGGCAAT	.	76	4	71	0	.	.
OR4C15	81309	hgsc.bcm.edu	37	11	55321858	55321858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001001920	exon1	c.C76A	p.Q26K	ATACCACAAATTG	.	34	2	40	0	.	.
RFX4	5992	hgsc.bcm.edu	37	12	107103190	107103190	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	RFX4_ENST00000357881,NS,carcinoma,0,5	RFX4_ENST00000357881	NM_001206691	exon9	c.C943T	p.R315X	AACTTGCGAAACA	.	46	2	53	0	.	0
NOS1	4842	hgsc.bcm.edu	37	12	117660627	117660627	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	NOS1,middle_lobe,carcinoma,0,1	NOS1	NM_001204218	exon27	c.C3970T	p.Q1324X	TGGATTGCCGGCA	.	36	2	58	0	.	0
HSF4	3299	hgsc.bcm.edu	37	16	67200473	67200473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	HSF4,NS,carcinoma,0,1	HSF4	NM_001538	exon8	c.C574A	p.L192I	CAGTGTCTCTTTG	.	39	2	47	0	.	0
RNU5F-1	26828	hgsc.bcm.edu	37	1	220269438	220269438	+	RNA	SNP	T	T	A	rs201594568		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	TTTTTTTAAAACA	.	81	4	67	0	0.001	.
PIK3C2G	5288	hgsc.bcm.edu	37	12	18443878	18443878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	PIK3C2G_ENST00000433979,NS,carcinoma,0,2	PIK3C2G_ENST00000433979	NM_004570	exon4	c.C851A	p.S284Y	TCTTTTCTAAGAC	.	39	2	51	0	.	0
OSBP	5007	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	11	59361134	59361134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_002556	exon9	c.C1621A	p.Q541K	TTTCCTGACGCAA	.	40	4	49	0	.	.
AVEN	57099	hgsc.bcm.edu	37	15	34295319	34295319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	AVEN,rectum,carcinoma,0,1	AVEN	NM_020371	exon2	c.G359A	p.R120Q	TGATATCGATCCC	.	47	2	44	0	.	0
TP53BP1	7158	hgsc.bcm.edu	37	15	43714161	43714161	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	TP53BP1,colon,carcinoma,0,1	TP53BP1	NM_001141980	exon19	c.G3992A	p.S1331N	CCACTGCTGTGCA	.	42	2	38	0	.	0
ARFGAP2	84364	hgsc.bcm.edu	37	11	47196591	47196591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	ARFGAP2,scalp,carcinoma,0,1	ARFGAP2	NM_032389	exon5	c.C455A	p.S152Y	AAATCAGAGTCCT	.	34	2	44	0	.	0
SHROOM4	57477	hgsc.bcm.edu	37	X	50350731	50350731	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_020717	exon6	c.G3411A	p.E1137E	TTCTTCCTCCTCC	.	12	4	20	0	.	.
DPY19L2P2	349152	hgsc.bcm.edu	37	7	102918096	102918096	+	RNA	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	AATAAAGAAAAAA	.	66	5	76	0	.	.
PPYR1	5540	hgsc.bcm.edu	37	10	47087274	47087274	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	PPYR1,colon,carcinoma,0,2	PPYR1	NM_005972	exon3	c.G491T	p.W164L	TCATCTGGGTCAT	.	42	3	52	0	.	0
PTPN3	5774	hgsc.bcm.edu;bcgsc.ca	37	9	112216792	112216792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001145368	exon5	c.C352A	p.Q118K	CTTGCTGCAGTGT	.	64	4	73	0	.	.
RGS7BP	401190	hgsc.bcm.edu;bcgsc.ca	37	5	63802565	63802565	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	RGS7BP,NS,adenoma,0,1	RGS7BP	NM_001029875	exon1	c.C114T	p.S38S	GGGCAGCGGCTCC	.	121	6	152	0	.	0
NCK2	8440	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	106471558	106471558	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001004720	exon2	c.C39T	p.Y13Y	GGACTACACCGCC	.	23	5	41	0	.	.
EXOG	9941	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	3	38539183	38539183	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_005107	exon2	c.G227T	p.C76F	CAAGGTGTTACAC	.	40	4	84	0	.	.
CYTB	0	hgsc.bcm.edu;broad.mit.edu	37	MT	15154	15154	+	Silent	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	ENST00000361789	exon1	c.C408A	p.G136G	GTGAGGCCAAATA	.	29	25	6	0	.	.
TRPS1	7227	hgsc.bcm.edu	37	8	116631413	116631413	+	Silent	SNP	C	C	T	rs372146914	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	TRPS1_ENST00000395715,NS,carcinoma,0,2	TRPS1_ENST00000395715	NM_014112	exon3	c.G912A	p.L304L	GTCCTGCAGCACA	.	36	3	57	0	.	0
ZNF468	90333	hgsc.bcm.edu	37	19	53344781	53344781	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001008801	exon4	c.C766T	p.R256X	GGTATCGCTTCTG	.	52	4	76	0	.	.
SPG11	80208	hgsc.bcm.edu	37	15	44888451	44888451	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	SPG11,NS,lymphoid_neoplasm,0,1	SPG11	NM_025137	exon25	c.C4264A	p.Q1422K	AGACTTGATCGCT	.	35	2	46	0	.	0
EFCAB13	124989	hgsc.bcm.edu	37	17	45412686	45412686	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	C17orf57,colon,carcinoma,0,1	C17orf57	NM_152347	exon5	c.C155T	p.P52L	TTTCACCGGAAAT	.	57	3	82	0	.	0
KCNJ9	3765	hgsc.bcm.edu	37	1	160057420	160057420	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	KCNJ9,rectum,carcinoma,0,1	KCNJ9	NM_004983	exon3	c.C995T	p.S332L	CACCTTCGTGCAG	.	37	2	21	0	.	0
MAP3K4	4216	hgsc.bcm.edu	37	6	161519381	161519381	+	Missense_Mutation	SNP	C	C	T	rs146403419	bycluster	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	MAP3K4_ENST00000392142,colon,carcinoma,0,12	MAP3K4_ENST00000392142	NM_005922	exon17	c.C3596T	p.A1199V	CTGCTGCTGTTGC	.	15	3	23	1	0.000	0
COL21A1	81578	hgsc.bcm.edu	37	6	56035527	56035527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_030820	exon5	c.G946A	p.V316M	TGTCCACACCATT	.	77	4	78	0	.	.
UTRN	7402	hgsc.bcm.edu	37	6	145051568	145051568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	UTRN,bladder,carcinoma,0,2	UTRN	NM_007124	exon53	c.G7885A	p.D2629N	TTGGCTGATCAGC	.	41	2	40	0	.	0
POLE	5426	hgsc.bcm.edu	37	12	133202250	133202250	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	POLE,colon,carcinoma,0,1	POLE	NM_006231	exon47	c.C6638A	p.A2213D	GTGAAGGCCATCA	.	25	2	27	0	.	0
LASP1	3927	hgsc.bcm.edu;broad.mit.edu	37	17	37071356	37071356	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_006148	exon6	c.C569T	p.A190V	AGCCTGCAGCCCC	.	74	4	73	0	.	.
C7	730	hgsc.bcm.edu	37	5	40945430	40945430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	C7_ENST00000313164,NS,carcinoma,0,1	C7_ENST00000313164	NM_000587	exon7	c.G698T	p.R233L	CTTCACGCAGTTA	.	43	2	58	0	.	0
SPATA31D1	389763	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	84608503	84608503	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001001670	exon4	c.A3118G	p.T1040A	GATTCAACAAGCT	.	66	11	67	0	.	.
IL24	11009	hgsc.bcm.edu	37	1	207076334	207076334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001185156	exon7	c.C554T	p.A185V	TAGAAGCAGCTCT	.	98	2	57	0	.	.
TRPV4	59341	hgsc.bcm.edu	37	12	110252313	110252313	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	TRPV4,NS,carcinoma,0,1	TRPV4	NM_001177433	exon1	c.C289T	p.P97S	GCCCAGGCACCAC	.	32	2	30	0	.	0
SASS6	163786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	100573425	100573425	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_194292	exon9	c.G997T	p.D333Y	CCTTATCCTTGAT	.	30	8	39	0	.	.
NDUFAF6	137682	hgsc.bcm.edu	37	8	96047805	96047805	+	Splice_Site	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_152416	exon3	c.420+1G>T	.	TGGAAGGTAAAAA	.	155	9	132	4	.	.
KRTAP13-2	337959	hgsc.bcm.edu	37	21	31744209	31744209	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	KRTAP13-2,rectum,carcinoma,0,2	KRTAP13-2	NM_181621	exon1	c.G323A	p.R108H	AGGGAGCGGCAGC	.	27	2	33	0	.	0
LPP	4026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	188590442	188590442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	LPP_ENST00000312675,colon,carcinoma,0,1	LPP_ENST00000312675	NM_005578	exon10	c.C1601T	p.P534L	TTGCCCCGCGATG	.	35	15	26	0	.	0
ALLC	55821	hgsc.bcm.edu	37	2	3744995	3744995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	ALLC,caecum,carcinoma,0,1	ALLC	NM_018436	exon10	c.G799T	p.A267S	CGATTGGCACATC	.	66	3	85	0	.	0
POU1F1	5449	hgsc.bcm.edu	37	3	87311274	87311274	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	POU1F1_ENST00000344265,caecum,carcinoma,0,2	POU1F1_ENST00000344265	NM_001122757	exon4	c.G629T	p.C210F	AGTTTGCATGCAT	.	27	2	34	0	.	0
BCL6B	255877	hgsc.bcm.edu	37	17	6928019	6928019	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.,22	.	NM_181844	exon4	c.C701G	p.S234C	AGGCCTCCAGCAG	.	23	0	34	0	.	85
KIAA0825	285600	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	93732013	93732013	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001145678	exon17	c.A3089G	p.N1030S	ACAGTGTTTCCGT	.	38	8	42	0	.	.
ATF6	22926	hgsc.bcm.edu;bcgsc.ca	37	1	161816251	161816251	+	Silent	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_007348	exon10	c.G1200A	p.Q400Q	GGAACAGGATTCC	.	61	4	40	0	.	.
EML6	400954	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	55074664	55074664	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001039753	exon8	c.A1091T	p.N364I	GCTGTAACATGGA	.	38	7	44	0	.	.
ATG4D	84971	hgsc.bcm.edu	37	19	10657598	10657598	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	ATG4D,caecum,carcinoma,0,2	ATG4D	NM_032885	exon4	c.C577A	p.R193S	CCTGCCCGCTGGA	.	42	2	41	0	.	0
TEX15	56154	hgsc.bcm.edu	37	8	30701108	30701108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_031271	exon1	c.C5426A	p.S1809Y	GGAACAGAAAGAG	.	43	3	54	0	.	.
EVI5	7813	hgsc.bcm.edu	37	1	93089878	93089878	+	Missense_Mutation	SNP	C	C	T	rs201423013		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	EVI5,NS,carcinoma,0,1	EVI5	NM_005665	exon14	c.G1634A	p.R545H	GTAGTACGAGCTA	.	30	2	49	1	.	0
DOCK4	9732	hgsc.bcm.edu	37	7	111381218	111381218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_014705	exon46	c.C4945A	p.Q1649K	AAGCTTGTGAGGA	.	98	4	103	0	.	.
IAPP	3375	hgsc.bcm.edu	37	12	21526361	21526361	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_000415	exon2	c.G76T	p.E26X	CCCATTGAAAGGT	.	65	4	90	0	.	.
C14orf37	145407	hgsc.bcm.edu	37	14	58604812	58604812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	C14orf37,NS,adenoma,0,1	C14orf37	NM_001001872	exon2	c.C1265T	p.T422M	GATTCCGTGAAGT	.	36	3	49	0	.	0
HTR2B	3357	hgsc.bcm.edu	37	2	231973540	231973540	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	HTR2B,NS,carcinoma,0,1	HTR2B	NM_000867	exon4	c.C1137A	p.V379V	GGTGTAGACCAAA	.	31	2	33	0	.	0
TRIB1	10221	hgsc.bcm.edu	37	8	126445609	126445609	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	TRIB1_ENST00000311922,NS,carcinoma,0,1	TRIB1_ENST00000311922	NM_025195	exon2	c.G411T	p.L137L	CCAGCTGCCATCG	.	34	3	31	0	.	0
HLA-A	3105	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	6	29910349	29910349	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001242758	exon1	c.C19G	p.R7G	GCGCCCCGAACCC	.	56	15	90	0	.	.
ZFHX4	79776	hgsc.bcm.edu	37	8	77775451	77775451	+	Silent	SNP	T	T	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	ZFHX4,colon,carcinoma,0,2	ZFHX4	NM_024721	exon11	c.T9501A	p.P3167P	ACCACCTCCTCCT	.	31	2	33	1	.	0
ARSD	414	hgsc.bcm.edu	37	X	2825480	2825480	+	Silent	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001669	exon10	c.C1614T	p.H538H	CACGGCGTGGTAC	.	88	4	87	0	.	.
GPLD1	2822	hgsc.bcm.edu	37	6	24448365	24448365	+	Silent	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	GPLD1,colon,carcinoma,0,1	GPLD1	NM_001503	exon16	c.C1518T	p.C506C	TACCTGGCAAGAA	.	43	2	57	0	.	0
SEPT11	55752	hgsc.bcm.edu	37	4	77949912	77949912	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_018243	exon8	c.G1084T	p.E362X	GAGAAAGAGGTAA	.	70	4	48	0	.	.
SLC6A5	9152	hgsc.bcm.edu	37	11	20660044	20660044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	SLC6A5,NS,meningioma,0,1	SLC6A5	NM_004211	exon13	c.G1909A	p.A637T	TATGCTGCCTCCT	.	31	2	35	0	.	0
RABL6	55684	hgsc.bcm.edu	37	9	139734309	139734309	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001173988	exon13	c.G1925T	p.S642I	AGAGCAGTGAGGA	.	79	4	82	0	.	.
SLIT2	9353	hgsc.bcm.edu	37	4	20530586	20530586	+	Silent	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	SLIT2,NS,carcinoma,0,1	SLIT2	NM_004787	exon16	c.C1477A	p.R493R	GATTATCGATCAA	.	39	2	40	0	.	0
UBR1	197131	hgsc.bcm.edu	37	15	43322177	43322177	+	Missense_Mutation	SNP	G	G	A	rs375913511		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	UBR1,NS,carcinoma,0,1	UBR1	NM_174916	exon21	c.C2344T	p.P782S	TGTGTGGCATGGG	.	29	3	47	0	.	0
OR5D14	219436	hgsc.bcm.edu	37	11	55563503	55563503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	OR5D14,right_upper_lobe,carcinoma,0,1	OR5D14	NM_001004735	exon1	c.C472T	p.P158S	TTTGGCCCCTTGG	.	49	2	61	0	.	0
DNAJC2	27000	hgsc.bcm.edu	37	7	102967063	102967063	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	Q99543-2,NS,carcinoma,0,2	Q99543-2	NM_001129887	exon5	c.T499C	p.S167P	GAACTGAGTTATC	.	46	2	49	0	.	0
KIAA1324L	222223	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	86521048	86521048	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.,2	.	NM_001142749	exon21	c.G3022C	p.A1008P	TGGTTGCCAAAGA	.	61	6	76	0	.	225
BMP2K	55589	hgsc.bcm.edu	37	4	79792166	79792166	+	Missense_Mutation	SNP	C	C	G	rs200441916	bycluster	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	BMP2K_ENST00000502871,caecum,carcinoma,0,4	BMP2K_ENST00000502871	NM_017593	exon11	c.C1461G	p.H487Q	GCAGCACCACCAC	.	30	3	24	0	.	0
AHNAK2	113146	hgsc.bcm.edu	37	14	105412163	105412163	+	Missense_Mutation	SNP	C	C	G	rs201181175	bycluster	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	AHNAK2_ENST00000333244,NS,carcinoma,0,1	AHNAK2_ENST00000333244	NM_138420	exon7	c.G9625C	p.V3209L	GCTTCACGTCCAC	.	36	3	32	1	.	0
DNAH12	201625	hgsc.bcm.edu	37	3	57394104	57394104	+	Missense_Mutation	SNP	C	C	T	rs377699028		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	DNAH12,caecum,carcinoma,0,1	DNAH12	NM_178504	exon40	c.G6122A	p.R2041Q	AAGATTCGGACCA	.	32	2	70	0	.	0
NUP210L	91181	hgsc.bcm.edu	37	1	153994676	153994676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	NUP210L,NS,carcinoma,0,1	NUP210L	NM_001159484	exon32	c.C4442T	p.A1481V	TCAATGGCATGCT	.	59	3	51	0	.	0
RALGAPA1	253959	hgsc.bcm.edu	37	14	36094620	36094620	+	Silent	SNP	C	C	T	rs200815371		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	RALGAPA1_ENST00000307138,NS,carcinoma,0,2	RALGAPA1_ENST00000307138	NM_194301	exon34	c.G5358A	p.L1786L	TTTCTTCAGGAGA	.	34	2	52	0	0.001	0
GALNT14	79623	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	2	31178586	31178586	+	Silent	SNP	A	A	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001253826	exon7	c.T567A	p.I189I	GCCCCGAATCCGG	.	24	5	22	0	.	.
MMEL1	79258	hgsc.bcm.edu	37	1	2540788	2540788	+	Silent	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	MMEL1,colon,carcinoma,0,1	MMEL1	NM_033467	exon6	c.C525T	p.C175C	GTTCATGCAGGAG	.	27	2	45	0	.	0
RAD51AP2	729475	hgsc.bcm.edu	37	2	17698681	17698681	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	RAD51AP2,NS,lymphoid_neoplasm,0,1	RAD51AP2	NM_001099218	exon1	c.C1002A	p.L334L	GCTACTGAGTGAT	.	32	2	39	0	.	0
TMIGD1	388364	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	28643709	28643709	+	Splice_Site	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_206832	exon8	c.786-1G>T	.	TCTCATCTGAAAT	.	39	11	55	0	.	.
CA10	56934	hgsc.bcm.edu	37	17	49825140	49825140	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	CA10,NS,malignant_melanoma,0,2	CA10	NM_001082534	exon5	c.C318A	p.S106S	GCGAAGGGATACG	.	38	2	48	0	.	0
MAP2K1	5604	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	66729174	66729174	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_002755	exon3	c.G382C	p.G128R	ATCGTGGGCTTCT	.	34	9	45	0	.	.
PPP6C	5537	hgsc.bcm.edu	37	9	127933372	127933372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	PPP6C_ENST00000451402,NS,malignant_melanoma,0,4	PPP6C_ENST00000451402	NM_001123355	exon3	c.C274T	p.H92Y	GTCCATGGATATC	.	36	2	38	0	.	0
ADAM5	255926	hgsc.bcm.edu	37	8	39182774	39182774	+	RNA	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GAAATGCATATTG	.	58	3	68	0	.	.
XPO5	57510	hgsc.bcm.edu	37	6	43519110	43519110	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	XPO5,NS,carcinoma,0,1	XPO5	NM_020750	exon15	c.C1653A	p.C551X	AAGGACGCAGGAC	.	80	4	83	0	.	0
LIAS	11019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	39472905	39472905	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_194451	exon9	c.G933C	p.Q311H	TATGCAGCCAACA	.	35	7	53	0	.	.
TRIM69	140691	hgsc.bcm.edu;bcgsc.ca	37	15	45059569	45059569	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_182985	exon7	c.C1102T	p.L368L	GCTGTACTGGGCT	.	61	4	71	0	.	.
ZNF569	148266	hgsc.bcm.edu;bcgsc.ca	37	19	37904891	37904891	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_152484	exon6	c.C669A	p.F223L	GTGACTGAAGGCT	.	49	4	68	0	.	.
TRIM36	55521	hgsc.bcm.edu	37	5	114483090	114483090	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_018700	exon3	c.C300A	p.G100G	CTTCCAGCCTGTG	.	38	4	44	0	.	.
OR4C13	283092	hgsc.bcm.edu	37	11	49974531	49974531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	OR4C13,NS,carcinoma,0,1	OR4C13	NM_001001955	exon1	c.C557A	p.A186D	ATCTTGCCTGCAC	.	60	3	51	0	.	0
TIGD2	166815	hgsc.bcm.edu	37	4	90035034	90035034	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	TIGD2,colon,carcinoma,0,2	TIGD2	NM_145715	exon1	c.G909T	p.L303F	AATGTTGAGTTCA	.	42	2	59	0	.	0
C17orf53	78995	hgsc.bcm.edu;broad.mit.edu	37	17	42232260	42232260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	C17orf53,colon,carcinoma,0,1	C17orf53	NM_024032	exon7	c.C1601T	p.T534M	TGGAGACGTGCCA	.	7	3	7	0	.	0
NDST3	9348	hgsc.bcm.edu	37	4	119154220	119154220	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_004784	exon9	c.T1873C	p.S625P	AGTAACTCCCCCA	.	80	4	111	0	.	.
USP20	10868	hgsc.bcm.edu	37	9	132642541	132642541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	USP20_ENST00000372429,NS,carcinoma,0,2	USP20_ENST00000372429	NM_001008563	exon25	c.C2734T	p.R912W	GAGACGCGGGCCG	.	40	2	60	0	.	0
DTNB	1838	hgsc.bcm.edu;bcgsc.ca	37	2	25611194	25611194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_021907	exon17	c.C1612A	p.H538N	CTCCATGGGTGGG	.	72	4	71	0	.	.
F13A1	2162	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	6175067	6175067	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_000129	exon12	c.C1493T	p.A498V	ATCAGGGCAGTTT	.	59	13	66	0	.	.
BRWD1	54014	hgsc.bcm.edu	37	21	40668258	40668258	+	Silent	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.,2	.	NM_018963	exon6	c.C381A	p.A127A	AGCAAAGGCAGAG	.	85	4	97	0	.	325
DRAM2	128338	broad.mit.edu;ucsc.edu	37	1	111663216	111663216	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	DRAM2	NM_178454	exon6	c.C439T	p.Q147X	TGGGCTGCATTTG	.	32	4	54	0	.	19
OLFM3	118427	broad.mit.edu	37	1	102269800	102269800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	OLFM3	NM_058170	exon6	c.C1371A	p.D457E	CTATGTGTCATCC	.	38	3	48	0	.	178
PSEN2	5664	broad.mit.edu	37	1	227076607	227076607	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	PSEN2	NM_012486	exon8	c.G644A	p.G215D	CAGTGGGCATGGT	.	39	4	30	0	.	55
VWA5B1	127731	broad.mit.edu	37	1	20669758	20669758	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	VWA5B1	NM_001039500	exon16	c.2498delC	p.T833fs	TGGGGACCCCTGG	.	6	2	14	0	.	44
BMS1	9790	broad.mit.edu	37	10	43318571	43318571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	BMS1,NS,carcinoma,0,2	BMS1	NM_014753	exon20	c.G3138A	p.M1046I	GGGAATGTTTAAT	.	206	6	291	2	.	132
VPS51	738	broad.mit.edu	37	11	64875830	64875830	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_013265	exon5	c.C887T	p.P296L	CACCTCCGGCTCC	.	3	2	9	0	.	.
PRSS33	260429	broad.mit.edu	37	16	2835911	2835911	+	Missense_Mutation	SNP	C	C	A	rs373423015	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	PRSS33	NM_152891	exon3	c.G131T	p.R44L	CCGTCCCGGCCAT	.	38	3	46	0	.	7
RABEP2	79874	broad.mit.edu	37	16	28936433	28936435	+	In_Frame_Del	DEL	GCC	GCC	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	RABEP2	NM_024816	exon1	c.50_52del	p.17_18del	CCCCCGGCCGCCG	.	6	2	13	0	.	48
TGIF1	7050	broad.mit.edu	37	18	3447749	3447749	+	Silent	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	TGIF1	NM_173207	exon1	c.G12A	p.S4S	TTGCTCGGGCAAA	.	35	4	29	0	.	41
ABHD1	84696	broad.mit.edu	37	2	27353427	27353427	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	ABHD1	NM_032604	exon9	c.T1033C	p.S345P	CAACACTCCCCCT	.	40	3	42	0	.	18
ANKRD20A8P	0	broad.mit.edu	37	2	95519360	95519360	+	RNA	SNP	G	G	T	rs77762483	bycluster	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	AC097374_3,NS,carcinoma,0,2	.	.	.	.	.	CCACTTGCACATG	.	154	8	204	1	.	.
ANKRD36	375248	broad.mit.edu	37	2	97877449	97877449	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	ANKRD36	NM_001164315	exon58	c.3440delA	p.E1147fs	CCACGGAAAAAAA	.	123	5	168	0	.	170
RGPD8	727851	broad.mit.edu;bcgsc.ca	37	2	113147025	113147025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	RGPD8	NM_001164463	exon20	c.G3497A	p.C1166Y	CGCTGGCATTCCT	.	162	17	224	0	.	81
.	0	broad.mit.edu	37	21	34369061	34369061	+	RNA	DEL	T	T	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GGCCTCTTGCAGT	.	6	1	7	0	.	.
DSCAM	1826	broad.mit.edu	37	21	41452122	41452122	+	Silent	SNP	T	T	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	DSCAM	NM_001271534	exon25	c.A4377G	p.P1459P	GCGCCCTGGGCCC	.	36	3	29	0	.	347
MORC3	23515	broad.mit.edu	37	21	37747505	37747505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	MORC3	NM_015358	exon17	c.G2731T	p.D911Y	GATCTTGATCTTC	.	65	3	64	0	.	78
.	131034	broad.mit.edu;ucsc.edu	37	3	131756416	131756416	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GCTCTCCTTTTAA	.	20	5	43	1	.	.
HTT	3064	broad.mit.edu	37	4	3076651	3076652	+	Frame_Shift_Del	DEL	GC	GC	-	rs10618869	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	HTT	NM_002111	exon1	c.99_100del	p.33_34del	GCAGCAGCAGCAG	.	7	2	11	0	.	221
HTT	3064	broad.mit.edu	37	4	3076654	3076657	+	Frame_Shift_Del	DEL	GCAG	GCAG	-	rs10618869	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	HTT	NM_002111	exon1	c.102_105del	p.34_35del	GCAGCAGCAGCAG	.	7	2	11	0	.	221
ACTR3C	653857	broad.mit.edu	37	7	149981851	149981851	+	Silent	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	NM_001164459	exon6	c.G555A	p.P185P	ATACAGCGGACGC	.	31	3	58	0	.	.
KDELR2	0	broad.mit.edu	37	7	6523689	6523691	+	In_Frame_Del	DEL	GGC	GGC	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	KDELR2	.	.	.	.	GTTCATGGCGGCG	.	6	2	11	0	.	31
RAMP3	10268	broad.mit.edu	37	7	45197468	45197470	+	In_Frame_Del	DEL	TGC	TGC	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	RAMP3	NM_005856	exon1	c.41_43del	p.14_15del	TCCCGTTGCTGCT	.	6	2	7	0	.	32
HTRA4	203100	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	38840515	38840515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	HTRA4	NM_153692	exon8	c.G1216T	p.V406L	CCTGATGTGAGTT	.	46	15	44	1	.	25
.	0	broad.mit.edu	37	8	52209691	52209691	+	RNA	DEL	T	T	-	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	CGGGGATTTTTGT	.	6	1	6	0	.	.
CNTNAP3	79937	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	39176053	39176053	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	CNTNAP3,NS,carcinoma,+1,1	CNTNAP3	NM_033655	exon7	c.C964T	p.R322W	ATGCCCGCGATCT	.	125	22	180	0	.	82
.	0	broad.mit.edu	37	9	66457322	66457322	+	RNA	SNP	G	G	C	rs56358692		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GCGACAGCGACAG	.	32	4	62	0	.	.
RNR2	0	broad.mit.edu	37	MT	2646	2646	+	RNA	SNP	G	G	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	CACGAGGGTTCAG	.	1695	20	680	0	.	.
AGTR2	186	broad.mit.edu;bcgsc.ca	37	X	115303767	115303767	+	Silent	SNP	T	T	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	AGTR2	NM_000686	exon3	c.T234C	p.V78V	AAAGGTTTCTAGC	.	22	3	41	0	.	62
WNT9A	7483	ucsc.edu	37	1	228109277	228109277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	WNT9A	NM_003395	exon4	c.G1040A	p.C347Y	ACATAGCAGCACC	.	38	4	24	0	.	39
HSPD1	3329	ucsc.edu	37	2	198363501	198363501	+	Silent	SNP	C	C	T	rs78187001		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	HSPD1_ENST00000426480,caecum,carcinoma,0,7	HSPD1	NM_002156	exon2	c.G72A	p.R24R	ATAAGCCCGAGTG	.	53	16	96	12	.	68
SEC14L5	9717	ucsc.edu	37	16	5046986	5046986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	SEC14L5	NM_014692	exon8	c.G911T	p.W304L	AGACCTGGCAACC	.	27	4	16	0	.	79
DNAH2	146754	ucsc.edu;bcgsc.ca	37	17	7661812	7661812	+	Splice_Site	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	DNAH2	NM_020877	exon13	c.2052-1G>T	.	TGCACAGGATTAT	.	19	4	22	0	.	498
LEPROT	54741	bcgsc.ca	37	1	65895660	65895660	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	LEPROT	NM_001198681	exon4	c.G235A	p.A79T	GAACTGGCATATT	.	84	4	85	0	.	16
SPTBN1	6711	bcgsc.ca	37	2	54858076	54858076	+	Silent	SNP	C	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	SPTBN1	NM_003128	exon16	c.C2892T	p.C964C	CGAGTGCAATGAA	.	10	3	18	0	.	378
.	0	bcgsc.ca	37	2	65432383	65432383	+	RNA	SNP	C	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GTCTTGCAGTGGC	.	93	5	100	0	.	.
.	0	bcgsc.ca	37	3	75496343	75496343	+	RNA	SNP	A	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	CACGTTATCTGGC	.	36	5	34	0	.	.
REEP2	51308	bcgsc.ca	37	5	137776731	137776731	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	REEP2,NS,carcinoma,-1,1	REEP2	NM_016606	exon2	c.C59T	p.A20V	ACCCAGCCTATTC	.	10	3	17	0	.	21
.	442266	bcgsc.ca	37	6	147729123	147729123	+	RNA	SNP	C	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	CTTAACCGTGGCA	.	13	4	18	0	.	.
FEZF1	389549	bcgsc.ca	37	7	121943286	121943286	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	FEZF1	NM_001024613	exon2	c.G881A	p.G294E	CCTTTTCCGCACA	.	62	4	73	0	.	60
.	4586	bcgsc.ca	37	11	1212966	1212966	+	RNA	SNP	C	A	A	rs76103892	alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	CTCTGCCTCTACA	.	80	9	118	1	C|0.500;T|0.500	.
ANKK1	255239	bcgsc.ca	37	11	113270029	113270029	+	Silent	SNP	G	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	ANKK1	NM_178510	exon8	c.G1338T	p.L446L	GCGCCTGCTCCTG	.	13	3	18	0	.	83
PIEZO1	9780	bcgsc.ca	37	16	88793124	88793124	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	PIEZO1	NM_001142864	exon25	c.C3698T	p.S1233L	CTCACCGACAGCA	.	12	3	22	0	.	79
BCAM	4059	bcgsc.ca	37	19	45315768	45315768	+	Missense_Mutation	SNP	A	C	C	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	BCAM	NM_001013257	exon4	c.A467C	p.K156T	CCAACAAAGGGAC	.	18	3	50	0	.	53
.	100130190	bcgsc.ca	37	X	136067097	136067097	+	RNA	SNP	G	T	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	.	.	.	GGAGAAGGTTCTT	.	44	11	52	0	.	.
AQP10	89872	hgsc.bcm.edu	37	1	154296076	154296076	+	Silent	SNP	T	T	G	rs1194610	bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	AQP10,NS,carcinoma,0,1	AQP10	NM_080429	exon5	c.T501G	p.T167T	GGGCACTGGGATG	.	49	2	51	0	.	0
OR6F1	343169	hgsc.bcm.edu	37	1	247875415	247875415	+	Missense_Mutation	SNP	A	A	C	rs2282316	bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele	TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	OR6F1,NS,carcinoma,0,1	OR6F1	NM_001005286	exon1	c.T643G	p.F215V	AGACAAAGGTGAT	.	45	2	29	0	.	0
LCE4A	199834	hgsc.bcm.edu	37	1	152681679	152681680	+	Missense_Mutation	DNP	CC	CC	GT	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	CC	CC	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	LCE4A,rectum,carcinoma,+1,15	LCE4A	NM_178356	exon1	c.C129T	p.S43C	TGGCTCCAGCTCT	.	36	0	32	2	.	1
METTL8	79828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	172188372	172188372	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-W5-AA2R-01A-11D-A417-09	TCGA-W5-AA2R-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	800521c7-a4a8-4184-aed7-573d0b99c23a	0562fd1a-2435-4350-8e46-6d7036ae748c	.	.	.	p.S221Y	.	.	TCCGGAGAGTTCC	.	27	10	31	0	.	.