Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ACSM2B 348158 genome.wustl.edu 37 16 20559410 20559410 + Nonsense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 16 20559410 20559410 G A SNP ACSM2B ENST00000329697 human ensembl 70_37 -1 known nonsense c.1072 p.R358* 0.963 pfam_AMP-dep_Synth/Lig pfam_AMP-dep_Synth/Lig - no_errors ACSM2B HGNC AKT1S1 84335 genome.wustl.edu 37 19 50376308 50376308 + Missense_Mutation SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 50376308 50376308 G T SNP AKT1S1 ENST00000344175 human ensembl 70_37 -1 known missense c.245 p.P82Q 0.982 NULL NULL - no_errors AKT1S1 HGNC ALMS1P 200420 genome.wustl.edu 37 2 73900988 73900988 + RNA SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 2 73900988 73900988 C T SNP ALMS1P ENST00000450720 human ensembl 70_37 +1 known rna NULL NULL 1.000 - - - no_errors ALMS1P HGNC ARID1A 8289 genome.wustl.edu 37 1 27057661 27057661 + Nonsense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 1 27057661 27057661 C T SNP ARID1A ENST00000324856 human ensembl 70_37 +1 known nonsense c.1369 p.Q457* 1.000 NULL pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd - no_errors ARID1A HGNC ARMC6 93436 genome.wustl.edu 37 19 19166718 19166718 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 19166718 19166718 C T SNP ARMC6 ENST00000392336 human ensembl 70_37 +1 known missense c.1274 p.P425L 0.993 superfamily_ARM-type_fold,smart_Armadillo pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo - no_errors ARMC6 HGNC BCORL1 63035 genome.wustl.edu 37 X 129148350 129148350 + Silent SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 X 129148350 129148350 C T SNP BCORL1 ENST00000303743 human ensembl 70_37 +1 known silent c.1602 p.S534 0.000 NULL pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom - no_errors BCORL1 HGNC COL19A1 1310 genome.wustl.edu 37 6 70873240 70873240 + Missense_Mutation SNP A A C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 6 70873240 70873240 A C SNP COL19A1 ENST00000322773 human ensembl 70_37 +1 known missense c.2352 p.L784F 0.000 pfam_Collagen pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G - no_errors COL19A1 HGNC CYP11A1 1583 genome.wustl.edu 37 15 74631051 74631051 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 74631051 74631051 G A SNP CYP11A1 ENST00000268053 human ensembl 70_37 -1 known missense c.1295 p.P432L 0.997 pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_mitochondrial,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B - no_errors CYP11A1 HGNC CYP2F1 1572 genome.wustl.edu 37 19 41630665 41630665 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 41630665 41630665 C T SNP CYP2F1 ENST00000331105 human ensembl 70_37 +1 known missense c.1006 p.R336W 0.951 pfam_Cyt_P450,superfamily_Cyt_P450 pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_CYP2_fam,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B - no_errors CYP2F1 HGNC DHX9 1660 genome.wustl.edu 37 1 182845266 182845266 + Missense_Mutation SNP C C A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 1 182845266 182845266 C A SNP DHX9 ENST00000367549 human ensembl 70_37 +1 known missense c.1897 p.P633T 1.000 NULL pfam_Ds-RNA-bd,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Ds-RNA-bd,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Ds-RNA-bd - no_errors DHX9 HGNC DNAH12 201625 genome.wustl.edu 37 3 57456170 57456170 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 3 57456170 57456170 C T SNP DNAH12 ENST00000351747 human ensembl 70_37 -1 known missense c.2105 p.R702Q 1.000 pfam_Dynein_heavy_dom-2 pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase - no_errors DNAH12 HGNC DOCK3 1795 genome.wustl.edu 37 3 51265439 51265440 + Frame_Shift_Del DEL TT TT - TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 TT TT Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 3 51265439 51265440 TT - DEL DOCK3 ENST00000266037 human ensembl 70_37 +1 known frame_shift_del c.1567_1568 p.F523fs 1.000:1.000 NULL pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain - no_errors DOCK3 HGNC ENSG00000201483 0 genome.wustl.edu 37 6 7187819 7187819 + RNA SNP T T G TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 6 7187819 7187819 T G SNP ENSG00000201483 ENST00000364613 human ensembl 70_37 -1 novel rna NULL NULL 0.005 - - - no_errors Y_RNA RFAM ENSG00000211459 0 genome.wustl.edu 37 MT 1572 1572 + RNA SNP A A G TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 MT 1572 1572 A G SNP ENSG00000211459 ENST00000389680 human ensembl 70_37 +1 known rna NULL NULL NULL - - - no_errors J01415.23 Clone_based_ensembl_gene F8 2157 genome.wustl.edu 37 X 154132217 154132218 + Frame_Shift_Ins INS - - T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 X 154132217 154132218 - T INS F8 ENST00000360256 human ensembl 70_37 -1 known frame_shift_ins c.5962_5961 p.E1987fs 0.019:0.005 pfam_Cu-oxidase_2,superfamily_Cupredoxin pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom - no_errors F8 HGNC FBXW7 55294 genome.wustl.edu 37 4 153247366 153247366 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 4 153247366 153247366 C T SNP FBXW7 ENST00000281708 human ensembl 70_37 -1 known missense c.1436 p.R479Q 1.000 pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep - no_errors FBXW7 HGNC FLNA 2316 genome.wustl.edu 37 X 153581709 153581709 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 X 153581709 153581709 G A SNP FLNA ENST00000369850 human ensembl 70_37 -1 known missense c.5977 p.R1993W 0.971 superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like - no_errors FLNA HGNC FSIP2 401024 genome.wustl.edu 37 2 186667594 186667594 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 2 186667594 186667594 G A SNP FSIP2 ENST00000343098 human ensembl 70_37 +1 known missense c.13828 p.E4610K 1.000 NULL NULL - no_errors FSIP2 HGNC HCN1 348980 genome.wustl.edu 37 5 45262787 45262787 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 5 45262787 45262787 C T SNP HCN1 ENST00000303230 human ensembl 70_37 -1 known missense c.1909 p.A637T 0.993 NULL pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG - no_errors HCN1 HGNC HELZ2 85441 genome.wustl.edu 37 20 62192477 62192477 + Silent SNP A A C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 20 62192477 62192477 A C SNP HELZ2 ENST00000467148 human ensembl 70_37 -1 known silent c.7104 p.P2368 0.508 NULL pfam_RNase_II/R,smart_RNase_II/R - no_errors HELZ2 HGNC ING1 3621 genome.wustl.edu 37 13 111371896 111371896 + Nonsense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 13 111371896 111371896 C T SNP ING1 ENST00000375774 human ensembl 70_37 +1 known nonsense c.886 p.Q296* 1.000 NULL pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger - no_errors ING1 HGNC KRAS 3845 genome.wustl.edu 37 12 25398284 25398284 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 12 25398284 25398284 C T SNP KRAS ENST00000256078 human ensembl 70_37 -1 known missense c.35 p.G12D 1.000 pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom - no_errors KRAS HGNC LOC646278 646278 genome.wustl.edu 37 15 29078470 29078470 + RNA SNP G G C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 29078470 29078470 G C SNP LOC646278 ENST00000563144 human ensembl 70_37 +1 putative rna NULL NULL 0.917 - - - no_errors RP11-578F21.12 Clone_based_vega_gene LOC646278 646278 genome.wustl.edu 37 15 29078494 29078494 + RNA SNP T T C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 29078494 29078494 T C SNP LOC646278 ENST00000563144 human ensembl 70_37 +1 putative rna NULL NULL 0.897 - - - no_errors RP11-578F21.12 Clone_based_vega_gene LOC646278 646278 genome.wustl.edu 37 15 29078498 29078498 + RNA SNP A A T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 29078498 29078498 A T SNP LOC646278 ENST00000563144 human ensembl 70_37 +1 putative rna NULL NULL 0.899 - - - no_errors RP11-578F21.12 Clone_based_vega_gene LOC646278 646278 genome.wustl.edu 37 15 29078501 29078501 + RNA SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 29078501 29078501 G A SNP LOC646278 ENST00000563144 human ensembl 70_37 +1 putative rna NULL NULL 0.939 - - - no_errors RP11-578F21.12 Clone_based_vega_gene MIR124-2 406908 genome.wustl.edu 37 8 65291792 65291792 + RNA SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 8 65291792 65291792 C T SNP MIR124-2 ENST00000385081 human ensembl 70_37 +1 known rna NULL NULL 1.000 - - - no_errors MIR124-2 HGNC MIR3122 100422947 genome.wustl.edu 37 1 212251014 212251014 + RNA SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 1 212251014 212251014 C T SNP MIR3122 ENST00000577243 human ensembl 70_37 +1 known rna NULL NULL 0.006 - - - no_errors MIR3122 HGNC MT-ND5 4540 genome.wustl.edu 37 MT 13843 13843 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 MT 13843 13843 G A SNP MT-ND5 ENST00000361567 human ensembl 70_37 +1 known missense c.1507 p.D503N NULL pfam_NADH_DH_su5_C pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5 - no_errors MT-ND5 HGNC NPC1L1 29881 genome.wustl.edu 37 7 44553224 44553224 + Missense_Mutation SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 7 44553224 44553224 G T SNP NPC1L1 ENST00000289547 human ensembl 70_37 -1 known missense c.3902 p.A1301E 0.903 NULL pfam_Patched,pfscan_SSD - no_errors NPC1L1 HGNC PARP2 10038 genome.wustl.edu 37 14 20815064 20815064 + Silent SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 14 20815064 20815064 C T SNP PARP2 ENST00000250416 human ensembl 70_37 +1 known silent c.355 p.L119 0.990 pfam_WGR_domain,superfamily_WGR_domain,smart_WGR_domain pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom - no_errors PARP2 HGNC PCDHA11 56138 genome.wustl.edu 37 5 140250200 140250200 + Silent SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 5 140250200 140250200 G A SNP PCDHA11 ENST00000398640 human ensembl 70_37 +1 known silent c.1512 p.S504 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin - no_errors PCDHA11 HGNC PIK3CA 5290 genome.wustl.edu 37 3 178936095 178936095 + Missense_Mutation SNP A A G TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 3 178936095 178936095 A G SNP PIK3CA ENST00000263967 human ensembl 70_37 +1 known missense c.1637 p.Q546R 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC PLA2G4E 123745 genome.wustl.edu 37 15 42302330 42302330 + Missense_Mutation SNP G G C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 15 42302330 42302330 G C SNP PLA2G4E ENST00000413860 human ensembl 70_37 -1 known missense c.116 p.A39G 0.000 pfscan_C2_membr_targeting pfam_LysoPLipase_cat_dom,pfam_C2_Ca-dep,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_LysoPLipase_cat_dom,pfscan_C2_membr_targeting,pfscan_LysoPLipase_cat_dom - no_errors PLA2G4E HGNC PRPF40B 25766 genome.wustl.edu 37 12 50025307 50025307 + Missense_Mutation SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 12 50025307 50025307 G T SNP PRPF40B ENST00000380281 human ensembl 70_37 +1 known missense c.142 p.A48S 1.000 NULL pfam_FF_domain,pfam_WW_Rsp5_WWP,superfamily_FF_domain,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,smart_FF_domain,pfscan_WW_Rsp5_WWP - no_errors PRPF40B HGNC PTPRS 5802 genome.wustl.edu 37 19 5244287 5244287 + Missense_Mutation SNP C C T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 5244287 5244287 C T SNP PTPRS ENST00000372412 human ensembl 70_37 -1 known missense c.1198 p.E400K 1.000 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like - no_errors PTPRS HGNC RBM27 54439 genome.wustl.edu 37 5 145603092 145603092 + Splice_Site SNP T T A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 5 145603092 145603092 T A SNP RBM27 ENST00000265271 human ensembl 70_37 +1 known splice_site c.303+2 e3+2 0.989 - - - no_errors RBM27 HGNC RPS10P7 376693 genome.wustl.edu 37 1 201489718 201489719 + RNA INS - - A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 1 201489718 201489719 - A INS RPS10P7 ENST00000441932 human ensembl 70_37 +1 known rna NULL NULL 0.051:0.056 - - - no_errors RPS10P7 HGNC SCN3B 55800 genome.wustl.edu 37 11 123508894 123508894 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 11 123508894 123508894 G A SNP SCN3B ENST00000299333 human ensembl 70_37 -1 known missense c.584 p.A195V 1.000 NULL pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like - no_errors SCN3B HGNC SPANXN2 494119 genome.wustl.edu 37 X 142795145 142795145 + Missense_Mutation SNP C C A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 X 142795145 142795145 C A SNP SPANXN2 ENST00000370498 human ensembl 70_37 -1 known missense c.533 p.G178V 0.016 NULL pfam_SPANX_prot - no_errors SPANXN2 HGNC SPP1 6696 genome.wustl.edu 37 4 88904020 88904020 + Missense_Mutation SNP T T C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 4 88904020 88904020 T C SNP SPP1 ENST00000395080 human ensembl 70_37 +1 known missense c.917 p.L306S 0.963 pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin - no_errors SPP1 HGNC TDRD6 221400 genome.wustl.edu 37 6 46656384 46656384 + Silent SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 6 46656384 46656384 G T SNP TDRD6 ENST00000316081 human ensembl 70_37 +1 known silent c.519 p.V173 1.000 NULL pfam_Tudor,smart_Tudor,pfscan_Tudor - no_errors TDRD6 HGNC TNRC18 84629 genome.wustl.edu 37 7 5360800 5360800 + Missense_Mutation SNP T T C TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 7 5360800 5360800 T C SNP TNRC18 ENST00000399537 human ensembl 70_37 -1 known missense c.6464 p.D2155G 1.000 NULL pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom - no_errors TNRC18 HGNC TPTEP1 387590 genome.wustl.edu 37 22 17131536 17131537 + RNA INS - - CTG TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 22 17131536 17131537 - CTG INS TPTEP1 ENST00000426585 human ensembl 70_37 +1 known rna NULL NULL 0.999:0.999 - - - no_errors TPTEP1 HGNC TTBK1 84630 genome.wustl.edu 37 6 43230717 43230717 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 6 43230717 43230717 G A SNP TTBK1 ENST00000259750 human ensembl 70_37 +1 known missense c.1615 p.D539N 1.000 NULL pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom - no_errors TTBK1 HGNC WIZ 58525 genome.wustl.edu 37 19 15550387 15550387 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 15550387 15550387 G A SNP WIZ ENST00000389282 human ensembl 70_37 -1 known missense c.1274 p.A425V 0.865 smart_Znf_C2H2-like smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors WIZ HGNC ZDHHC11B 653082 genome.wustl.edu 37 5 766931 766931 + Missense_Mutation SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 5 766931 766931 G A SNP ZDHHC11B ENST00000382776 human ensembl 70_37 -1 known missense c.104 p.S35L 0.981 NULL pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase - no_errors ZDHHC11B HGNC ZFHX2 85446 genome.wustl.edu 37 14 23994585 23994585 + Silent SNP G G A TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 14 23994585 23994585 G A SNP ZFHX2 ENST00000419474 human ensembl 70_37 -1 known silent c.4566 p.S1522 0.989 superfamily_Adenylate_cyclase-assoc_CAP_N pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2 - no_errors ZFHX2 HGNC ZNF143 7702 genome.wustl.edu 37 11 9496112 9496112 + Missense_Mutation SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 11 9496112 9496112 G T SNP ZNF143 ENST00000396602 human ensembl 70_37 +1 known missense c.305 p.R102L 1.000 NULL pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF143 HGNC ZNF681 148213 genome.wustl.edu 37 19 23926852 23926852 + Silent SNP A A G TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 19 23926852 23926852 A G SNP ZNF681 ENST00000402377 human ensembl 70_37 -1 known silent c.1500 p.H500 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF681 HGNC ZNF703 80139 genome.wustl.edu 37 8 37556105 37556105 + Silent SNP G G T TCGA-FU-A57G-01A-11D-A26G-09 TCGA-FU-A57G-10A-01D-A26G-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feec64b6-4789-4b18-8664-27eeefb36a57 8688044c-e6a4-45a0-9266-dde6e8873fc9 8 37556105 37556105 G T SNP ZNF703 ENST00000331569 human ensembl 70_37 +1 known silent c.1686 p.P562 0.925 NULL pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2 - no_errors ZNF703 HGNC