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E-MTAB-15866 RNA-seq of coding RNA Homo sapiens, Homo sapiens

Effect of ALK kinase inhibitor, ceritinib, on the gene expression profile of SUDHL-1 cell line

·发布 2026年1月1日
8
样本数
32
实验数
实验描述

Tyrosine kinase receptor anaplastic lymphoma kinase (ALK) is physiologically expressed during embryogenesis. However, chromosomal rearrangements, especially translocations, cause expression of pathogenic ALK fusion proteins that drive tumor formation and maintenance. For instance, the translocation between chromosomes 2 and 5 (t(2;5)) fuses the nucleophosmin 1 (NPM1) gene with ALK, leading to anaplastic large cell lymphoma (ALCL). The constitutive active NPM1::ALK tyrosine kinase drives tumor transformation and tumor cells inevitably depend on ALK kinase activity for survival. For this reason, ALK kinase inhibitors showed great success in treating ALK-positive ALCL. Here, we explored gene expression changes induced by ceritinib, second generation ALK inhibitor, on a representative cell line, SUDHL-1.

样本属性
Organism
Homo sapiens
Disease
Anaplastic large cell lymphoma, ALK-positive
Cell type
Anaplastic large cell lymphoma, ALK-positive
Genotype
wild type genotype
Cell line
SUDHL1
实验信息
登记号
E-MTAB-15866
实验类型
RNA-seq of coding RNA
物种
Homo sapiens, Homo sapiens
发布日期
2026年1月1日
提交者
Adriana Petrazzuolo
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