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E-MTAB-14642 RNA-seq of coding RNA Mus musculus, Mus musculus

Dynamic Ca2+-dependent transcription links metabolic stress to impaired β-cell identity

·发布 2025年5月22日
48
样本数
48
实验数
1
相关文献
实验描述

Sustained stimulation and elevations in intracellular Ca2+ concentrations due to metabolic stress in pre-diabetic states triggers gene expression changes contributing to the loss of pancreatic β-cell function. To establish a temporal relationship between β-cell stimulation and perturbations in Ca2+-dependent transcription, islet Ca2+ dynamics and gene expression was analysed in cultured mouse islets that were stimulated by membrane depolarization with tolbutamide, a sulfonylurea that blocks the ATP-dependent potassium (KATP) channel. By varying the timing and nature of the experimental stimulory conditions, we defined temporal transcriptional dynamics of islets in responce to stimulation, identified immediate early response genes and transcriptional regulators that drive these transcriptional changes and defined a set of physiologically relevant Ca2+-regulated genes with sustained changes 24 hours post-stimulation. Ca2+-dependent changes resulting from chronic stimulation include an increase in β-cell stress response and dedifferentiation genes, and a decrease in critical β-cell identity genes.

参考文献
Dynamic Ca2+-Dependent Transcription Links Metabolic Stress to Impaired β-Cell Identity.
Osipovich AB, Dickerson MT, Cartailler JP, Shrestha S, Wright NM, Jacobson DA, Magnuson MA.
PMID: 40526459
样本属性
Organism
Mus musculus
Strain
C57B/6J
Developmental stage
adult
Sex
male
Organism part
islet of Langerhans
Age
8.5 week, 8 week, 9 week
Genotype
Ascl1Flox/ Flox; Ins1Cre/+;R26TdTomato/+, wild type genotype
Individual
25, 26, 27, ... 45 other values
实验信息
登记号
E-MTAB-14642
实验类型
RNA-seq of coding RNA
物种
Mus musculus, Mus musculus
发布日期
2025年5月22日
提交者
Jean-Philippe Cartailler、 Mark Magnuson、 Anna Osipovich、 Shristi Shrestha
分析服务
分析服务

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